Belongs to the class-I aminoacyl-tRNA synthetase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G55400 AT3G55400 |
| fragaria_vesca | FvH4_6g24170 FvH4_6g24170 FvH4_6g51210 FvH4_6g51210 FvH4_6g51210 FvH4_6g51210 |
| malus_domestica | MD01G1125100.v1.1 MD07G1194800.v1.1 |
| prunus_persica | Prupe.2G232400_v2.0.a1 Prupe.2G232400_v2.0.a1 |
| pyrus_communis | pycom01g15130 pycom07g18350 pycom07g18360 |
| rosa_chinensis | RchiOBHm_Chr3g0482991 RchiOBHm_Chr3g0483011 |
| rosa_laevigata | RLG00000023307 RLG00000023309 |
| rosa_multiflora | Rmu_sc0003351.1_g000014 |
| rosa_roxburghii | Rroxscaffold_6G00398740 |
| rosa_rugosa | Rorug03G0202800 |
| rosa_samantha | Rh3AG251600 Rh3BG288100 Rh3CG285600 Rh3DG281300 |
| rosa_wichuraiana | Rw3G022730 Rw3G022760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 188 |
| AccB1I | GGYRCC | 1 cut(s) | 317 |
| AccI | GTMKAC | 1 cut(s) | 987 |
| AccII | CGCG | 2 cut(s) | 139, 1461 |
| AciI | CCGC | 9 cut(s) | 5, 12, 85, 147, 171, 174, 203, 1139, 1742 |
| AclWI | GGATC | 1 cut(s) | 458 |
| AcoI | YGGCCR | 1 cut(s) | 992 |
| AcsI | RAATTY | 5 cut(s) | 446, 712, 1124, 1169, 1441 |
| AcuI | CTGAAG | 3 cut(s) | 909, 1344, 1521 |
| AdeI | CACNNNGTG | 1 cut(s) | 1656 |
| AfaI | GTAC | 3 cut(s) | 720, 1148, 1261 |
| AfeI | AGCGCT | 1 cut(s) | 241 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 78, 233, 1162, 1264, 1730 |
| AflII | CTTAAG | 1 cut(s) | 1274 |
| AflIII | ACRYGT | 1 cut(s) | 137 |
| AgsI | TTSAA | 6 cut(s) | 749, 1103, 1239, 1311, 1718, 1748 |
| AjnI | CCWGG | 1 cut(s) | 1640 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 448, 480 |
| Alw26I | GTCTC | 3 cut(s) | 513, 768, 1476 |
| AlwI | GGATC | 1 cut(s) | 458 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 356 |
| Ama87I | CYCGRG | 2 cut(s) | 789, 1371 |
| Aor51HI | AGCGCT | 1 cut(s) | 241 |
| AoxI | GGCC | 4 cut(s) | 766, 935, 992, 1021 |
| ApoI | RAATTY | 5 cut(s) | 446, 712, 1124, 1169, 1441 |
| AspLEI | GCGC | 4 cut(s) | 242, 1461, 1463, 1690 |
| AspS9I | GGNCC | 2 cut(s) | 81, 1516 |
| AsuHPI | GGTGA | 3 cut(s) | 187, 344, 1557 |
| AsuII | TTCGAA | 1 cut(s) | 454 |
| AvaI | CYCGRG | 2 cut(s) | 789, 1371 |
| AvaII | GGWCC | 2 cut(s) | 81, 1516 |
| AxyI | CCTNAGG | 1 cut(s) | 1157 |
| BalI | TGGCCA | 1 cut(s) | 994 |
| BanI | GGYRCC | 1 cut(s) | 317 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 479, 511 |
| BbsI | GAAGAC | 1 cut(s) | 118 |
| BccI | CCATC | 6 cut(s) | 81, 109, 260, 1027, 1058, 1069 |
| BceAI | ACGGC | 1 cut(s) | 905 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 251, 285 |
| BciT130I | CCWGG | 1 cut(s) | 1642 |
| BcoDI | GTCTC | 3 cut(s) | 513, 768, 1476 |
| BfaI | CTAG | 4 cut(s) | 360, 1019, 1088, 1421 |
| BfmI | CTRYAG | 1 cut(s) | 348 |
| BfoI | RGCGCY | 1 cut(s) | 243 |
| BfrI | CTTAAG | 1 cut(s) | 1274 |
| Bme1390I | CCNGG | 1 cut(s) | 1642 |
| Bme18I | GGWCC | 2 cut(s) | 81, 1516 |
| BmeT110I | CYCGRG | 2 cut(s) | 789, 1371 |
| BmgT120I | GGNCC | 2 cut(s) | 81, 1516 |
| BmiI | GGNNCC | 2 cut(s) | 83, 319 |
| BmrFI | CCNGG | 1 cut(s) | 1642 |
| BmrI | ACTGGG | 1 cut(s) | 875 |
| BmsI | GCATC | 5 cut(s) | 253, 819, 847, 1126, 1621 |
| BmuI | ACTGGG | 1 cut(s) | 875 |
| BpiI | GAAGAC | 1 cut(s) | 118 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 482, 514 |
| BpmI | CTGGAG | 1 cut(s) | 1663 |
| Bpu14I | TTCGAA | 1 cut(s) | 454 |
| BpuEI | CTTGAG | 2 cut(s) | 484, 1770 |
| BsaAI | YACGTR | 1 cut(s) | 214 |
| BsaI | GGTCTC | 1 cut(s) | 1476 |
| BsaJI | CCNNGG | 1 cut(s) | 1466 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 78, 233, 1162, 1264, 1730 |
| Bse1I | ACTGG | 4 cut(s) | 177, 319, 870, 995 |
| Bse21I | CCTNAGG | 1 cut(s) | 1157 |
| Bse3DI | GCAATG | 3 cut(s) | 267, 1438, 1545 |
| BseBI | CCWGG | 1 cut(s) | 1642 |
| BseDI | CCNNGG | 1 cut(s) | 1466 |
| BseGI | GGATG | 4 cut(s) | 583, 810, 1069, 1459 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 78, 233, 1162, 1264, 1730 |
| BseMI | GCAATG | 3 cut(s) | 267, 1438, 1545 |
| BseMII | CTCAG | 2 cut(s) | 91, 1171 |
| BseNI | ACTGG | 4 cut(s) | 177, 319, 870, 995 |
| BsePI | GCGCGC | 1 cut(s) | 1459 |
| BseRI | GAGGAG | 2 cut(s) | 216, 581 |
| Bsh1236I | CGCG | 2 cut(s) | 139, 1461 |
| BshFI | GGCC | 4 cut(s) | 768, 937, 994, 1023 |
| BshNI | GGYRCC | 1 cut(s) | 317 |
| BsiHKCI | CYCGRG | 2 cut(s) | 789, 1371 |
| BslFI | GGGAC | 3 cut(s) | 558, 1199, 1281 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 78, 233, 1162, 1264, 1730 |
| BsmAI | GTCTC | 3 cut(s) | 513, 768, 1476 |
| BsmFI | GGGAC | 3 cut(s) | 558, 1199, 1281 |
| BsmI | GAATGC | 1 cut(s) | 223 |
| BsnI | GGCC | 4 cut(s) | 768, 937, 994, 1023 |
| Bso31I | GGTCTC | 1 cut(s) | 1476 |
| BsoBI | CYCGRG | 2 cut(s) | 789, 1371 |
| Bsp119I | TTCGAA | 1 cut(s) | 454 |
| Bsp1407I | TGTACA | 1 cut(s) | 718 |
| Bsp143I | GATC | 3 cut(s) | 463, 1198, 1425 |
| Bsp19I | CCATGG | 1 cut(s) | 1466 |
| BspACI | CCGC | 9 cut(s) | 5, 12, 85, 147, 171, 174, 203, 1139, 1742 |
| BspANI | GGCC | 4 cut(s) | 768, 937, 994, 1023 |
| BspCNI | CTCAG | 2 cut(s) | 90, 1170 |
| BspFNI | CGCG | 2 cut(s) | 139, 1461 |
| BspLI | GGNNCC | 2 cut(s) | 83, 319 |
| BspMAI | CTGCAG | 1 cut(s) | 352 |
| BspPI | GGATC | 1 cut(s) | 458 |
| BspT104I | TTCGAA | 1 cut(s) | 454 |
| BspT107I | GGYRCC | 1 cut(s) | 317 |
| BspTI | CTTAAG | 1 cut(s) | 1274 |
| BspTNI | GGTCTC | 1 cut(s) | 1476 |
| BsrDI | GCAATG | 3 cut(s) | 267, 1438, 1545 |
| BsrGI | TGTACA | 1 cut(s) | 718 |
| BsrI | ACTGG | 4 cut(s) | 177, 319, 870, 995 |
| BssECI | CCNNGG | 1 cut(s) | 1466 |
| BssHII | GCGCGC | 1 cut(s) | 1459 |
| BssMI | GATC | 3 cut(s) | 463, 1198, 1425 |
| BssT1I | CCWWGG | 1 cut(s) | 1466 |
| Bst2UI | CCWGG | 1 cut(s) | 1642 |
| Bst4CI | ACNGT | 6 cut(s) | 386, 402, 605, 1259, 1348, 1626 |
| BstAFI | CTTAAG | 1 cut(s) | 1274 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 356 |
| BstAUI | TGTACA | 1 cut(s) | 718 |
| BstBAI | YACGTR | 1 cut(s) | 214 |
| BstBI | TTCGAA | 1 cut(s) | 454 |
| BstC8I | GCNNGC | 7 cut(s) | 137, 141, 274, 833, 939, 996, 1461 |
| BstDEI | CTNAG | 5 cut(s) | 77, 427, 770, 1029, 1157 |
| BstDSI | CCRYGG | 1 cut(s) | 1466 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1160 |
| BstF5I | GGATG | 4 cut(s) | 583, 810, 1069, 1459 |
| BstFNI | CGCG | 2 cut(s) | 139, 1461 |
| BstH2I | RGCGCY | 1 cut(s) | 243 |
| BstHHI | GCGC | 4 cut(s) | 242, 1461, 1463, 1690 |
| BstKTI | GATC | 3 cut(s) | 466, 1201, 1428 |
| BstMAI | GTCTC | 3 cut(s) | 513, 768, 1476 |
| BstMBI | GATC | 3 cut(s) | 463, 1198, 1425 |
| BstNI | CCWGG | 1 cut(s) | 1642 |
| BstSCI | CCNGG | 1 cut(s) | 1640 |
| BstSFI | CTRYAG | 1 cut(s) | 348 |
| BstUI | CGCG | 2 cut(s) | 139, 1461 |
| BstV2I | GAAGAC | 1 cut(s) | 118 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1798 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1157 |
| BsuRI | GGCC | 4 cut(s) | 768, 937, 994, 1023 |
| BtgI | CCRYGG | 1 cut(s) | 1466 |
| BtgZI | GCGATG | 1 cut(s) | 238 |
| BtsCI | GGATG | 4 cut(s) | 583, 810, 1069, 1459 |
| BtsI | GCAGTG | 1 cut(s) | 345 |
| BtsIMutI | CAGTG | 5 cut(s) | 184, 312, 345, 382, 1344 |
| Cac8I | GCNNGC | 7 cut(s) | 137, 141, 274, 833, 939, 996, 1461 |
| CaiI | CAGNNNCTG | 1 cut(s) | 356 |
| CfoI | GCGC | 4 cut(s) | 242, 1461, 1463, 1690 |
| Cfr13I | GGNCC | 2 cut(s) | 81, 1516 |
| Csp6I | GTAC | 3 cut(s) | 719, 1147, 1260 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1281, 1316, 1642, 1677 |
| CviAII | CATG | 9 cut(s) | 329, 473, 627, 980, 1046, 1069, 1450, 1467, 1684 |
| CviQI | GTAC | 3 cut(s) | 719, 1147, 1260 |
| DdeI | CTNAG | 5 cut(s) | 77, 427, 770, 1029, 1157 |
| DpnI | GATC | 3 cut(s) | 465, 1200, 1427 |
| DpnII | GATC | 3 cut(s) | 463, 1198, 1425 |
| DraIII | CACNNNGTG | 1 cut(s) | 1656 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 188 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 188 |
| EaeI | YGGCCR | 1 cut(s) | 992 |
| Eco130I | CCWWGG | 1 cut(s) | 1466 |
| Eco147I | AGGCCT | 1 cut(s) | 1023 |
| Eco31I | GGTCTC | 1 cut(s) | 1476 |
| Eco47I | GGWCC | 2 cut(s) | 81, 1516 |
| Eco47III | AGCGCT | 1 cut(s) | 241 |
| Eco57I | CTGAAG | 3 cut(s) | 909, 1344, 1521 |
| Eco81I | CCTNAGG | 1 cut(s) | 1157 |
| Eco88I | CYCGRG | 2 cut(s) | 789, 1371 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1160 |
| EcoO109I | RGGNCCY | 2 cut(s) | 81, 1516 |
| EcoRII | CCWGG | 1 cut(s) | 1640 |
| EcoT14I | CCWWGG | 1 cut(s) | 1466 |
| ErhI | CCWWGG | 1 cut(s) | 1466 |
| FaeI | CATG | 9 cut(s) | 332, 476, 630, 983, 1049, 1072, 1453, 1470, 1687 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 290, 322, 576, 608 |
| FaqI | GGGAC | 3 cut(s) | 558, 1199, 1281 |
| FatI | CATG | 9 cut(s) | 328, 472, 626, 979, 1045, 1068, 1449, 1466, 1683 |
| FauI | CCCGC | 1 cut(s) | 92 |
| FblI | GTMKAC | 1 cut(s) | 987 |
| FokI | GGATG | 4 cut(s) | 590, 797, 1076, 1466 |
| FspBI | CTAG | 4 cut(s) | 360, 1019, 1088, 1421 |
| GlaI | GCGC | 4 cut(s) | 241, 1460, 1462, 1689 |
| GsuI | CTGGAG | 1 cut(s) | 1663 |
| HaeII | RGCGCY | 1 cut(s) | 243 |
| HaeIII | GGCC | 4 cut(s) | 768, 937, 994, 1023 |
| HhaI | GCGC | 4 cut(s) | 242, 1461, 1463, 1690 |
| Hin1II | CATG | 9 cut(s) | 332, 476, 630, 983, 1049, 1072, 1453, 1470, 1687 |
| Hin6I | GCGC | 4 cut(s) | 240, 1459, 1461, 1688 |
| HinP1I | GCGC | 4 cut(s) | 240, 1459, 1461, 1688 |
| HinfI | GANTC | 2 cut(s) | 1050, 1307 |
| HphI | GGTGA | 3 cut(s) | 187, 344, 1557 |
| Hpy166II | GTNNAC | 1 cut(s) | 988 |
| Hpy188I | TCNGA | 5 cut(s) | 711, 889, 1135, 1195, 1501 |
| Hpy188III | TCNNGA | 6 cut(s) | 79, 105, 418, 789, 1054, 1768 |
| Hpy8I | GTNNAC | 1 cut(s) | 988 |
| Hpy99I | CGWCG | 2 cut(s) | 130, 167 |
| HpyAV | CCTTC | 7 cut(s) | 292, 481, 735, 1034, 1319, 1724, 1765 |
| HpyCH4III | ACNGT | 6 cut(s) | 386, 402, 605, 1259, 1348, 1626 |
| HpyCH4IV | ACGT | 3 cut(s) | 125, 213, 973 |
| HpyCH4V | TGCA | 9 cut(s) | 135, 350, 635, 662, 983, 1319, 1511, 1559, 1709 |
| HpyF3I | CTNAG | 5 cut(s) | 77, 427, 770, 1029, 1157 |
| HpySE526I | ACGT | 3 cut(s) | 125, 213, 973 |
| Hsp92II | CATG | 9 cut(s) | 332, 476, 630, 983, 1049, 1072, 1453, 1470, 1687 |
| HspAI | GCGC | 4 cut(s) | 240, 1459, 1461, 1688 |
| Kzo9I | GATC | 3 cut(s) | 463, 1198, 1425 |
| LmnI | GCTCC | 2 cut(s) | 898, 1644 |
| LweI | GCATC | 5 cut(s) | 253, 819, 847, 1126, 1621 |
| MaeI | CTAG | 4 cut(s) | 360, 1019, 1088, 1421 |
| MaeII | ACGT | 3 cut(s) | 125, 213, 973 |
| MaeIII | GTNAC | 4 cut(s) | 179, 386, 1570, 1636 |
| MalI | GATC | 3 cut(s) | 465, 1200, 1427 |
| MboI | GATC | 3 cut(s) | 463, 1198, 1425 |
| MfeI | CAATTG | 4 cut(s) | 480, 559, 1098, 1239 |
| MlsI | TGGCCA | 1 cut(s) | 994 |
| MluI | ACGCGT | 1 cut(s) | 137 |
| MluNI | TGGCCA | 1 cut(s) | 994 |
| MmeI | TCCRAC | 2 cut(s) | 666, 734 |
| Mox20I | TGGCCA | 1 cut(s) | 994 |
| MscI | TGGCCA | 1 cut(s) | 994 |
| MseI | TTAA | 6 cut(s) | 35, 738, 1254, 1275, 1338, 1479 |
| MslI | CAYNNNNRTG | 2 cut(s) | 931, 1073 |
| Msp20I | TGGCCA | 1 cut(s) | 994 |
| MspA1I | CMGCKG | 2 cut(s) | 353, 1322 |
| MspCI | CTTAAG | 1 cut(s) | 1274 |
| MspR9I | CCNGG | 1 cut(s) | 1642 |
| MunI | CAATTG | 4 cut(s) | 480, 559, 1098, 1239 |
| Mva1269I | GAATGC | 1 cut(s) | 223 |
| MvaI | CCWGG | 1 cut(s) | 1642 |
| MvnI | CGCG | 2 cut(s) | 139, 1461 |
| NcoI | CCATGG | 1 cut(s) | 1466 |
| NdeII | GATC | 3 cut(s) | 463, 1198, 1425 |
| NlaIII | CATG | 9 cut(s) | 332, 476, 630, 983, 1049, 1072, 1453, 1470, 1687 |
| NlaIV | GGNNCC | 2 cut(s) | 83, 319 |
| NmeAIII | GCCGAG | 1 cut(s) | 1602 |
| NmuCI | GTSAC | 3 cut(s) | 179, 386, 1570 |
| NspV | TTCGAA | 1 cut(s) | 454 |
| PaeR7I | CTCGAG | 1 cut(s) | 789 |
| PauI | GCGCGC | 1 cut(s) | 1459 |
| PceI | AGGCCT | 1 cut(s) | 1023 |
| PctI | GAATGC | 1 cut(s) | 223 |
| PfeI | GAWTC | 2 cut(s) | 1050, 1307 |
| Ppu21I | YACGTR | 1 cut(s) | 214 |
| PpuMI | RGGWCCY | 2 cut(s) | 81, 1516 |
| Psp5II | RGGWCCY | 2 cut(s) | 81, 1516 |
| Psp6I | CCWGG | 1 cut(s) | 1640 |
| PspGI | CCWGG | 1 cut(s) | 1640 |
| PspN4I | GGNNCC | 2 cut(s) | 83, 319 |
| PspPI | GGNCC | 2 cut(s) | 81, 1516 |
| PspPPI | RGGWCCY | 2 cut(s) | 81, 1516 |
| PstI | CTGCAG | 1 cut(s) | 352 |
| PstNI | CAGNNNCTG | 1 cut(s) | 356 |
| PteI | GCGCGC | 1 cut(s) | 1459 |
| PvuII | CAGCTG | 2 cut(s) | 353, 1322 |
| RsaI | GTAC | 3 cut(s) | 720, 1148, 1261 |
| RsaNI | GTAC | 3 cut(s) | 719, 1147, 1260 |
| RseI | CAYNNNNRTG | 2 cut(s) | 931, 1073 |
| SaqAI | TTAA | 6 cut(s) | 35, 738, 1254, 1275, 1338, 1479 |
| Sau3AI | GATC | 3 cut(s) | 463, 1198, 1425 |
| Sau96I | GGNCC | 2 cut(s) | 81, 1516 |
| ScrFI | CCNGG | 1 cut(s) | 1642 |
| SfaNI | GCATC | 5 cut(s) | 253, 819, 847, 1126, 1621 |
| SfcI | CTRYAG | 1 cut(s) | 348 |
| Sfr274I | CTCGAG | 1 cut(s) | 789 |
| SfuI | TTCGAA | 1 cut(s) | 454 |
| SinI | GGWCC | 2 cut(s) | 81, 1516 |
| SlaI | CTCGAG | 1 cut(s) | 789 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 931, 1073 |
| SmlI | CTYRAG | 4 cut(s) | 499, 789, 1274, 1785 |
| SmoI | CTYRAG | 4 cut(s) | 499, 789, 1274, 1785 |
| SseBI | AGGCCT | 1 cut(s) | 1023 |
| SsiI | CCGC | 9 cut(s) | 5, 12, 85, 147, 171, 174, 203, 1139, 1742 |
| SspI | AATATT | 2 cut(s) | 1213, 1530 |
| SspMI | CTAG | 4 cut(s) | 360, 1019, 1088, 1421 |
| StuI | AGGCCT | 1 cut(s) | 1023 |
| StyD4I | CCNGG | 1 cut(s) | 1640 |
| StyI | CCWWGG | 1 cut(s) | 1466 |
| TaaI | ACNGT | 6 cut(s) | 386, 402, 605, 1259, 1348, 1626 |
| TaiI | ACGT | 3 cut(s) | 128, 216, 976 |
| TaqI | TCGA | 2 cut(s) | 454, 790 |
| TatI | WGTACW | 1 cut(s) | 718 |
| TauI | GCSGC | 4 cut(s) | 8, 14, 173, 176 |
| TfiI | GAWTC | 2 cut(s) | 1050, 1307 |
| Tru1I | TTAA | 6 cut(s) | 35, 738, 1254, 1275, 1338, 1479 |
| Tru9I | TTAA | 6 cut(s) | 35, 738, 1254, 1275, 1338, 1479 |
| TscAI | CASTG | 5 cut(s) | 184, 319, 352, 389, 1351 |
| TseFI | GTSAC | 3 cut(s) | 179, 386, 1570 |
| Tsp45I | GTSAC | 3 cut(s) | 179, 386, 1570 |
| TspDTI | ATGAA | 9 cut(s) | 269, 298, 439, 489, 717, 915, 1085, 1109, 1195 |
| TspGWI | ACGGA | 4 cut(s) | 652, 722, 911, 1614 |
| TspRI | CASTG | 5 cut(s) | 184, 319, 352, 389, 1351 |
| Vha464I | CTTAAG | 1 cut(s) | 1274 |
| VpaK11BI | GGWCC | 2 cut(s) | 81, 1516 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1160 |
| XapI | RAATTY | 5 cut(s) | 446, 712, 1124, 1169, 1441 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1798 |
| XhoI | CTCGAG | 1 cut(s) | 789 |
| XmiI | GTMKAC | 1 cut(s) | 987 |
| XspI | CTAG | 4 cut(s) | 360, 1019, 1088, 1421 |