Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0005770

Physical Location & Seq

Genomic Coordinates Forward (+)

21632981 .. 21637878

Gene Structure 4898 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023307

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGGCTGCAGCAGCAGCAGGGACTAGAATAAACTGCTTTTTCTTAAACCCCATAAATCCCCTCAACTCCAAAACCACCACCCGTCTCACCACCCACCTCCACTTCCGTCTTTCAAGAAAAACGCCACCCACCTATTGCACACGCGCCTCCGCCACTACTCCCGACGAAACATCCGCCGCCGGCGCCAATGACCCTTTTGTCCTCACAACTCCTCTTTATTACGTGAACGCCCCTCCCCACATGGGCAGTGCCTACACCACCATCGCCGCCGACGCCATTGCTCGCTTCCAGAGGCTGCTGGGCAAGACAGTCATTTTCATTACCGGGACTGATGAACACGGCGAAAAGATTGCTGCCGCTGCCGCAGCTAATGACTCCACCCCTGCACAACACTGCGACCTCATTTCACAGTCTTACATCACTCTCTGGAAAGACTTGGATATAGGTTATGACAAGTTCATTCGGACAACTGATCCCAAGCATGAAGCGATTGTGAAGGAGTTTTACTCTAGGGTCCTTGACAATGGAGACATTTATAGGGCCGACTATCAGGGACTTTATTGTATCAACTGTGAAGAGTATAAGGATGAGAAAGAACTGCTTGAGAATAACTGTTGCCCCACGCATCTAAAGCCATGTGTTGCACGGAAAGAGGATAATTTCTTCTTTGCATTGTCCAAGTATCAGAAGCGACTGGAAGAAACTTTGGCAAAAAATCCAAATTTCGTGCAGCCTTCATACCGTCTTAATGAGGTGCAAAGTTGGATTAAAAGCGGCCTAAGAGACTTTTCCATTTCTCGAGCATTAGTGGATTGGGGCGTCCCAGTTCCTAATGATAGCAAGCAAACCATATATGTTTGGTTTGATGCTTTATTGGGTTATATATCAGCACTTTCAGAGGATATGGAACAACCTAGTTTAGAAAGAGCTGTTTCATCAGGATGGCCTGCCTCGCTACACTTGATTGGCAAGGATATTTTACGTTTCCATGCAGTATACTGGCCAGCTATGCTAATGTCTGCAGGACTGGGCCTTCCCAAGATGGTGTTTGGCCATGGGTTTTTGACAAAGGATGGTATGAAGATGGGAAAGTCACTAGGGAATACAATTGAACCAAATGATTTGGTTCAAAAATTCGGGTCTGATGCGGTCAGGTACTTCTTCGTCAGGGAGGTGGAATTTGGTGGTGATGGGGATTATTCAGAAGATCGTTTCATCAATATTGTCAATGCTCATCTTGCCAATTCAATCGGAAATCTGCTTAACCGCACTCTGGGGCTTCTTAAGAAGAACTGCCAATCTACTTTGGTAATTGATTCAAGTATCGCAGCTGAAGGAACTACATTCAAGGACACTGTGGAGAAGTTGGTTGAAAAAGCTCGGGTTGATTATGAAAACCTCTCACTATCATCAGCTTGTGAGGCTGTTCTTGAGATCAGCAATGCTGGAAATTCATACATGGATGGGCGTGCACCATGGTCTCTCTTTAAGCAAGGGGGTGCTGCAAGTGAAGCTGCTGCAAAGGACCTTGTGATAATACTAGAAGCAATGAGGGTTATAGCTATTGCATTATCCCCTGTCACACCAAGTTTAAGTTGGAGAATATATCGACAGCTTGGCTACTCAAAGGATCAGTTTGATGCTGCTACCTGGAGTGACACCAGGTGGGGTGGGCTTAAAGGTGGTCAGGTCATGGCTCAACCTCAACCGATCTTTGCAAGGATTGAAAGCCAAACAGAAGAAGAAAATAGGGTCGAAGCACCCAAAAAGGTGAAAAAGAACAAGTTACCACAGTCTCAACAGGTGGTTGAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004825 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006431 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009791 GO:0009908 GO:0009987 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0035670 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090567 GO:0099402 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00450 ko00970 map00450 map00970

Pfam Domains

Protein Families

Anticodon_1 tRNA-synt_1g

Protein Analysis

606

Amino Acids

67.2

Weight (kDa)

6.31

Isoelectric Point (pI)

34.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1	PF00133	60 - 277	1.6e-12	tRNA synthetases class I (I, L, M and V)
tRNA-synt_1g	PF09334	67 - 205	2.1e-40	tRNA synthetases class I (M)
tRNA-synt_1e	PF01406	78 - 233	2.2e-06	tRNA synthetases class I (C) catalytic domain
tRNA-synt_1g	PF09334	198 - 425	2.4e-63	tRNA synthetases class I (M)
tRNA-synt_1	PF00133	283 - 391	6.6e-11	tRNA synthetases class I (I, L, M and V)
Anticodon_3	PF19303	444 - 582	6.6e-11	Anticodon binding domain of methionyl tRNA ligase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005770)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55400 AT3G55400
fragaria_vesca	FvH4_6g24170 FvH4_6g24170 FvH4_6g51210 FvH4_6g51210 FvH4_6g51210 FvH4_6g51210
malus_domestica	MD01G1125100.v1.1 MD07G1194800.v1.1
prunus_persica	Prupe.2G232400_v2.0.a1 Prupe.2G232400_v2.0.a1
pyrus_communis	pycom01g15130 pycom07g18350 pycom07g18360
rosa_chinensis	RchiOBHm_Chr3g0482991 RchiOBHm_Chr3g0483011
rosa_laevigata	RLG00000023307 RLG00000023309
rosa_multiflora	Rmu_sc0003351.1_g000014
rosa_roxburghii	Rroxscaffold_6G00398740
rosa_rugosa	Rorug03G0202800
rosa_samantha	Rh3AG251600 Rh3BG288100 Rh3CG285600 Rh3DG281300
rosa_wichuraiana	Rw3G022730 Rw3G022760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	197
AccB1I	GGYRCC	1 cut(s)	182
AccI	GTMKAC	1 cut(s)	996
AccII	CGCG	1 cut(s)	144
AciI	CCGC	9 cut(s)	150, 174, 177, 267, 357, 363, 774, 1148, 1267
AclWI	GGATC	2 cut(s)	467, 1638
AcoI	YGGCCR	2 cut(s)	1001, 1051
AcsI	RAATTY	4 cut(s)	721, 1133, 1178, 1450
AcuI	CTGAAG	1 cut(s)	1353
AcyI	GRCGYC	3 cut(s)	183, 273, 819
AdeI	CACNNNGTG	1 cut(s)	1665
AfaI	GTAC	1 cut(s)	1157
AfiI	CCNNNNNNNGG	2 cut(s)	242, 1273
AflII	CTTAAG	1 cut(s)	1283
AgsI	TTSAA	9 cut(s)	114, 1112, 1130, 1248, 1320, 1348, 1373, 1727, 1811
AjnI	CCWGG	2 cut(s)	1649, 1661
Alw21I	GWGCWC	1 cut(s)	1474
Alw26I	GTCTC	5 cut(s)	89, 522, 777, 1485, 1800
Alw44I	GTGCAC	1 cut(s)	1470
AlwI	GGATC	2 cut(s)	467, 1638
AlwNI	CAGNNNCTG	1 cut(s)	295
Ama87I	CYCGRG	2 cut(s)	798, 1380
AoxI	GGCC	6 cut(s)	540, 775, 944, 1001, 1030, 1051
ApaLI	GTGCAC	1 cut(s)	1470
ApoI	RAATTY	4 cut(s)	721, 1133, 1178, 1450
AspLEI	GCGC	2 cut(s)	146, 185
AspS9I	GGNCC	4 cut(s)	514, 540, 1030, 1525
AsuC2I	CCSGG	1 cut(s)	325
AsuHPI	GGTGA	3 cut(s)	79, 1199, 1783
AvaI	CYCGRG	2 cut(s)	798, 1380
AvaII	GGWCC	2 cut(s)	514, 1525
BaeGI	GKGCMC	1 cut(s)	1474
BalI	TGGCCA	2 cut(s)	1003, 1053
BanI	GGYRCC	1 cut(s)	182
BarI	GAAGNNNNNNTAC	2 cut(s)	488, 520
Bbv12I	GWGCWC	1 cut(s)	1474
BccI	CCATC	7 cut(s)	269, 936, 1036, 1067, 1078, 1184, 1457
BceAI	ACGGC	1 cut(s)	355
BcgI	CGANNNNNNTGC	4 cut(s)	260, 294, 332, 366
BciT130I	CCWGG	2 cut(s)	1651, 1663
BcnI	CCSGG	1 cut(s)	325
BcoDI	GTCTC	5 cut(s)	89, 522, 777, 1485, 1800
BfaI	CTAG	5 cut(s)	24, 510, 915, 1097, 1541
BfmI	CTRYAG	2 cut(s)	6, 1020
BfoI	RGCGCY	1 cut(s)	186
BfrI	CTTAAG	1 cut(s)	1283
Bme1390I	CCNGG	3 cut(s)	325, 1651, 1663
Bme18I	GGWCC	2 cut(s)	514, 1525
BmeT110I	CYCGRG	2 cut(s)	798, 1380
BmgT120I	GGNCC	4 cut(s)	514, 540, 1030, 1525
BmiI	GGNNCC	2 cut(s)	184, 515
BmrFI	CCNGG	3 cut(s)	325, 1651, 1663
BmrI	ACTGGG	2 cut(s)	818, 1037
BmsI	GCATC	4 cut(s)	634, 856, 1135, 1630
BmuI	ACTGGG	2 cut(s)	818, 1037
BplI	GAGNNNNNCTC	2 cut(s)	491, 523
BpmI	CTGGAG	1 cut(s)	1672
BpuEI	CTTGAG	2 cut(s)	623, 1451
BpuMI	CCSGG	1 cut(s)	325
BsaAI	YACGTR	1 cut(s)	223
BsaHI	GRCGYC	3 cut(s)	183, 273, 819
BsaI	GGTCTC	1 cut(s)	1485
BsaJI	CCNNGG	2 cut(s)	1054, 1475
Bsc4I	CCNNNNNNNGG	2 cut(s)	242, 1273
Bse118I	RCCGGY	1 cut(s)	179
Bse1I	ACTGG	4 cut(s)	699, 824, 1004, 1032
Bse3DI	GCAATG	3 cut(s)	276, 1447, 1554
BseBI	CCWGG	2 cut(s)	1651, 1663
BseDI	CCNNGG	2 cut(s)	1054, 1475
BseGI	GGATG	5 cut(s)	170, 592, 947, 1078, 1468
BseLI	CCNNNNNNNGG	2 cut(s)	242, 1273
BseMI	GCAATG	3 cut(s)	276, 1447, 1554
BseNI	ACTGG	4 cut(s)	699, 824, 1004, 1032
BseRI	GAGGAG	1 cut(s)	201
BseSI	GKGCMC	1 cut(s)	1474
BseYI	CCCAGC	1 cut(s)	298
BsgI	GTGCAG	2 cut(s)	369, 749
Bsh1236I	CGCG	1 cut(s)	144
BshFI	GGCC	6 cut(s)	542, 777, 946, 1003, 1032, 1053
BshNI	GGYRCC	1 cut(s)	182
BsiHKAI	GWGCWC	1 cut(s)	1474
BsiHKCI	CYCGRG	2 cut(s)	798, 1380
BsiSI	CCGG	2 cut(s)	180, 324
BslFI	GGGAC	4 cut(s)	34, 340, 567, 806
BslI	CCNNNNNNNGG	2 cut(s)	242, 1273
BsmAI	GTCTC	5 cut(s)	89, 522, 777, 1485, 1800
BsmBI	CGTCTC	1 cut(s)	89
BsmFI	GGGAC	4 cut(s)	34, 340, 567, 806
BsnI	GGCC	6 cut(s)	542, 777, 946, 1003, 1032, 1053
Bso31I	GGTCTC	1 cut(s)	1485
BsoBI	CYCGRG	2 cut(s)	798, 1380
Bsp1286I	GDGCHC	1 cut(s)	1474
Bsp143I	GATC	5 cut(s)	472, 1207, 1434, 1630, 1710
Bsp19I	CCATGG	2 cut(s)	1054, 1475
BspACI	CCGC	9 cut(s)	150, 174, 177, 267, 357, 363, 774, 1148, 1267
BspANI	GGCC	6 cut(s)	542, 777, 946, 1003, 1032, 1053
BspFNI	CGCG	1 cut(s)	144
BspLI	GGNNCC	2 cut(s)	184, 515
BspMAI	CTGCAG	2 cut(s)	10, 1024
BspPI	GGATC	2 cut(s)	467, 1638
BspT107I	GGYRCC	1 cut(s)	182
BspTI	CTTAAG	1 cut(s)	1283
BspTNI	GGTCTC	1 cut(s)	1485
BsrDI	GCAATG	3 cut(s)	276, 1447, 1554
BsrFI	RCCGGY	1 cut(s)	179
BsrI	ACTGG	4 cut(s)	699, 824, 1004, 1032
BssAI	RCCGGY	1 cut(s)	179
BssECI	CCNNGG	2 cut(s)	1054, 1475
BssMI	GATC	5 cut(s)	472, 1207, 1434, 1630, 1710
BssNAI	GTATAC	1 cut(s)	997
BssNI	GRCGYC	3 cut(s)	183, 273, 819
BssT1I	CCWWGG	2 cut(s)	1054, 1475
Bst1107I	GTATAC	1 cut(s)	997
Bst2UI	CCWGG	2 cut(s)	1651, 1663
Bst4CI	ACNGT	7 cut(s)	310, 411, 572, 614, 743, 1357, 1794
Bst6I	CTCTTC	1 cut(s)	570
BstACI	GRCGYC	3 cut(s)	183, 273, 819
BstAFI	CTTAAG	1 cut(s)	1283
BstBAI	YACGTR	1 cut(s)	223
BstC8I	GCNNGC	6 cut(s)	181, 283, 842, 948, 1005, 1470
BstDEI	CTNAG	1 cut(s)	779
BstDSI	CCRYGG	2 cut(s)	1054, 1475
BstF5I	GGATG	5 cut(s)	170, 592, 947, 1078, 1468
BstFNI	CGCG	1 cut(s)	144
BstH2I	RGCGCY	1 cut(s)	186
BstHHI	GCGC	2 cut(s)	146, 185
BstKTI	GATC	5 cut(s)	475, 1210, 1437, 1633, 1713
BstMAI	GTCTC	5 cut(s)	89, 522, 777, 1485, 1800
BstMBI	GATC	5 cut(s)	472, 1207, 1434, 1630, 1710
BstNI	CCWGG	2 cut(s)	1651, 1663
BstSCI	CCNGG	3 cut(s)	323, 1649, 1661
BstSFI	CTRYAG	2 cut(s)	6, 1020
BstSLI	GKGCMC	1 cut(s)	1474
BstUI	CGCG	1 cut(s)	144
BstZ17I	GTATAC	1 cut(s)	997
BsuRI	GGCC	6 cut(s)	542, 777, 946, 1003, 1032, 1053
BtgI	CCRYGG	2 cut(s)	1054, 1475
BtgZI	GCGATG	1 cut(s)	247
BtsCI	GGATG	5 cut(s)	170, 592, 947, 1078, 1468
BtsI	GCAGTG	2 cut(s)	253, 391
BtsIMutI	CAGTG	3 cut(s)	253, 391, 1353
Cac8I	GCNNGC	6 cut(s)	181, 283, 842, 948, 1005, 1470
CaiI	CAGNNNCTG	1 cut(s)	295
CfoI	GCGC	2 cut(s)	146, 185
Cfr10I	RCCGGY	1 cut(s)	179
Cfr13I	GGNCC	4 cut(s)	514, 540, 1030, 1525
CseI	GACGC	2 cut(s)	281, 808
CsiI	ACCWGGT	1 cut(s)	1661
Csp6I	GTAC	1 cut(s)	1156
CviAII	CATG	8 cut(s)	241, 482, 636, 989, 1055, 1459, 1476, 1693
CviQI	GTAC	1 cut(s)	1156
DdeI	CTNAG	1 cut(s)	779
DinI	GGCGCC	1 cut(s)	184
DpnI	GATC	5 cut(s)	474, 1209, 1436, 1632, 1712
DpnII	GATC	5 cut(s)	472, 1207, 1434, 1630, 1710
DraIII	CACNNNGTG	1 cut(s)	1665
DrdI	GACNNNNNNGTC	1 cut(s)	197
DseDI	GACNNNNNNGTC	1 cut(s)	197
EaeI	YGGCCR	2 cut(s)	1001, 1051
Eam1104I	CTCTTC	1 cut(s)	570
EarI	CTCTTC	1 cut(s)	570
EciI	GGCGGA	2 cut(s)	139, 163
Eco130I	CCWWGG	2 cut(s)	1054, 1475
Eco31I	GGTCTC	1 cut(s)	1485
Eco47I	GGWCC	2 cut(s)	514, 1525
Eco57I	CTGAAG	1 cut(s)	1353
Eco88I	CYCGRG	2 cut(s)	798, 1380
EcoO109I	RGGNCCY	2 cut(s)	514, 1525
EcoRII	CCWGG	2 cut(s)	1649, 1661
EcoT14I	CCWWGG	2 cut(s)	1054, 1475
EgeI	GGCGCC	1 cut(s)	184
EheI	GGCGCC	1 cut(s)	184
ErhI	CCWWGG	2 cut(s)	1054, 1475
Esp3I	CGTCTC	1 cut(s)	89
FaeI	CATG	8 cut(s)	244, 485, 639, 992, 1058, 1462, 1479, 1696
FalI	AAGNNNNNCTT	2 cut(s)	585, 617
FaqI	GGGAC	4 cut(s)	34, 340, 567, 806
FatI	CATG	8 cut(s)	240, 481, 635, 988, 1054, 1458, 1475, 1692
FblI	GTMKAC	1 cut(s)	996
FokI	GGATG	5 cut(s)	157, 599, 954, 1085, 1475
FspBI	CTAG	5 cut(s)	24, 510, 915, 1097, 1541
GlaI	GCGC	2 cut(s)	145, 184
GsaI	CCCAGC	1 cut(s)	302
GsuI	CTGGAG	1 cut(s)	1672
HaeII	RGCGCY	1 cut(s)	186
HaeIII	GGCC	6 cut(s)	542, 777, 946, 1003, 1032, 1053
HapII	CCGG	2 cut(s)	180, 324
HgaI	GACGC	2 cut(s)	281, 808
HhaI	GCGC	2 cut(s)	146, 185
Hin1I	GRCGYC	3 cut(s)	183, 273, 819
Hin1II	CATG	8 cut(s)	244, 485, 639, 992, 1058, 1462, 1479, 1696
Hin6I	GCGC	2 cut(s)	144, 183
HinP1I	GCGC	2 cut(s)	144, 183
HindIII	AAGCTT	1 cut(s)	1812
HinfI	GANTC	2 cut(s)	374, 1316
HpaII	CCGG	2 cut(s)	180, 324
HphI	GGTGA	3 cut(s)	79, 1199, 1783
Hpy166II	GTNNAC	3 cut(s)	226, 997, 1472
Hpy188I	TCNGA	6 cut(s)	465, 687, 898, 1144, 1204, 1253
Hpy188III	TCNNGA	7 cut(s)	114, 161, 289, 427, 798, 939, 1430
Hpy8I	GTNNAC	3 cut(s)	226, 997, 1472
Hpy99I	CGWCG	2 cut(s)	167, 275
HpyAV	CCTTC	4 cut(s)	490, 744, 1043, 1328
HpyCH4III	ACNGT	7 cut(s)	310, 411, 572, 614, 743, 1357, 1794
HpyCH4IV	ACGT	2 cut(s)	222, 982
HpyF3I	CTNAG	1 cut(s)	779
HpySE526I	ACGT	2 cut(s)	222, 982
Hsp92I	GRCGYC	3 cut(s)	183, 273, 819
Hsp92II	CATG	8 cut(s)	244, 485, 639, 992, 1058, 1462, 1479, 1696
HspAI	GCGC	2 cut(s)	144, 183
KasI	GGCGCC	1 cut(s)	182
KroI	GCCGGC	1 cut(s)	179
KroNI	GCCGGC	1 cut(s)	181
Kzo9I	GATC	5 cut(s)	472, 1207, 1434, 1630, 1710
LweI	GCATC	4 cut(s)	634, 856, 1135, 1630
MabI	ACCWGGT	1 cut(s)	1661
MaeI	CTAG	5 cut(s)	24, 510, 915, 1097, 1541
MaeII	ACGT	2 cut(s)	222, 982
MaeIII	GTNAC	4 cut(s)	1092, 1579, 1655, 1785
MalI	GATC	5 cut(s)	474, 1209, 1436, 1632, 1712
MboI	GATC	5 cut(s)	472, 1207, 1434, 1630, 1710
MboII	GAAGA	9 cut(s)	587, 655, 710, 1093, 1153, 1217, 1300, 1751, 1754
MfeI	CAATTG	1 cut(s)	1107
MhlI	GDGCHC	1 cut(s)	1474
MlsI	TGGCCA	2 cut(s)	1003, 1053
MluCI	AATT	8 cut(s)	658, 721, 1107, 1133, 1178, 1243, 1311, 1450
MluNI	TGGCCA	2 cut(s)	1003, 1053
Mly113I	GGCGCC	1 cut(s)	183
MlyI	GAGTC	1 cut(s)	368
MmeI	TCCRAC	2 cut(s)	743, 1577
Mox20I	TGGCCA	2 cut(s)	1003, 1053
MreI	CGCCGGCG	1 cut(s)	179
MroNI	GCCGGC	1 cut(s)	179
MscI	TGGCCA	2 cut(s)	1003, 1053
MseI	TTAA	9 cut(s)	44, 747, 768, 1263, 1284, 1488, 1592, 1677, 1816
MslI	CAYNNNNRTG	1 cut(s)	940
Msp20I	TGGCCA	2 cut(s)	1003, 1053
MspA1I	CMGCKG	2 cut(s)	359, 1331
MspCI	CTTAAG	1 cut(s)	1283
MspI	CCGG	2 cut(s)	180, 324
MspR9I	CCNGG	3 cut(s)	325, 1651, 1663
MunI	CAATTG	1 cut(s)	1107
MvaI	CCWGG	2 cut(s)	1651, 1663
MvnI	CGCG	1 cut(s)	144
NaeI	GCCGGC	1 cut(s)	181
NarI	GGCGCC	1 cut(s)	183
NciI	CCSGG	1 cut(s)	325
NcoI	CCATGG	2 cut(s)	1054, 1475
NdeII	GATC	5 cut(s)	472, 1207, 1434, 1630, 1710
NgoMIV	GCCGGC	1 cut(s)	179
NlaIII	CATG	8 cut(s)	244, 485, 639, 992, 1058, 1462, 1479, 1696
NlaIV	GGNNCC	2 cut(s)	184, 515
NmuCI	GTSAC	3 cut(s)	1092, 1579, 1655
PaeR7I	CTCGAG	1 cut(s)	798
PdiI	GCCGGC	1 cut(s)	181
PfeI	GAWTC	1 cut(s)	1316
PleI	GAGTC	1 cut(s)	368
PluTI	GGCGCC	1 cut(s)	186
PpsI	GAGTC	1 cut(s)	368
Ppu21I	YACGTR	1 cut(s)	223
PpuMI	RGGWCCY	2 cut(s)	514, 1525
Psp5II	RGGWCCY	2 cut(s)	514, 1525
Psp6I	CCWGG	2 cut(s)	1649, 1661
PspFI	CCCAGC	1 cut(s)	298
PspGI	CCWGG	2 cut(s)	1649, 1661
PspN4I	GGNNCC	2 cut(s)	184, 515
PspPI	GGNCC	4 cut(s)	514, 540, 1030, 1525
PspPPI	RGGWCCY	2 cut(s)	514, 1525
PstI	CTGCAG	2 cut(s)	10, 1024
PstNI	CAGNNNCTG	1 cut(s)	295
PvuII	CAGCTG	1 cut(s)	1331
RsaI	GTAC	1 cut(s)	1157
RsaNI	GTAC	1 cut(s)	1156
RseI	CAYNNNNRTG	1 cut(s)	940
SaqAI	TTAA	9 cut(s)	44, 747, 768, 1263, 1284, 1488, 1592, 1677, 1816
Sau3AI	GATC	5 cut(s)	472, 1207, 1434, 1630, 1710
Sau96I	GGNCC	4 cut(s)	514, 540, 1030, 1525
SchI	GAGTC	1 cut(s)	368
ScrFI	CCNGG	3 cut(s)	325, 1651, 1663
SduI	GDGCHC	1 cut(s)	1474
SexAI	ACCWGGT	1 cut(s)	1661
SfaNI	GCATC	4 cut(s)	634, 856, 1135, 1630
SfcI	CTRYAG	2 cut(s)	6, 1020
SfoI	GGCGCC	1 cut(s)	184
Sfr274I	CTCGAG	1 cut(s)	798
SgrAI	CRCCGGYG	1 cut(s)	179
SinI	GGWCC	2 cut(s)	514, 1525
SlaI	CTCGAG	1 cut(s)	798
SmiMI	CAYNNNNRTG	1 cut(s)	940
SmlI	CTYRAG	4 cut(s)	602, 798, 1283, 1430
SmoI	CTYRAG	4 cut(s)	602, 798, 1283, 1430
Sse9I	AATT	8 cut(s)	658, 721, 1107, 1133, 1178, 1243, 1311, 1450
SsiI	CCGC	9 cut(s)	150, 174, 177, 267, 357, 363, 774, 1148, 1267
SspDI	GGCGCC	1 cut(s)	182
SspI	AATATT	1 cut(s)	1222
SspMI	CTAG	5 cut(s)	24, 510, 915, 1097, 1541
StyD4I	CCNGG	3 cut(s)	323, 1649, 1661
StyI	CCWWGG	2 cut(s)	1054, 1475
TaaI	ACNGT	7 cut(s)	310, 411, 572, 614, 743, 1357, 1794
TaiI	ACGT	2 cut(s)	225, 985
TaqI	TCGA	3 cut(s)	799, 1609, 1755
TasI	AATT	8 cut(s)	658, 721, 1107, 1133, 1178, 1243, 1311, 1450
TauI	GCSGC	5 cut(s)	179, 269, 359, 365, 777
TfiI	GAWTC	1 cut(s)	1316
Tru1I	TTAA	9 cut(s)	44, 747, 768, 1263, 1284, 1488, 1592, 1677, 1816
Tru9I	TTAA	9 cut(s)	44, 747, 768, 1263, 1284, 1488, 1592, 1677, 1816
TscAI	CASTG	3 cut(s)	253, 398, 1360
TseFI	GTSAC	3 cut(s)	1092, 1579, 1655
Tsp45I	GTSAC	3 cut(s)	1092, 1579, 1655
TspGWI	ACGGA	2 cut(s)	95, 661
TspRI	CASTG	3 cut(s)	253, 398, 1360
Vha464I	CTTAAG	1 cut(s)	1283
VneI	GTGCAC	1 cut(s)	1470
VpaK11BI	GGWCC	2 cut(s)	514, 1525
XapI	RAATTY	4 cut(s)	721, 1133, 1178, 1450
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1593
XhoI	CTCGAG	1 cut(s)	798
XmiI	GTMKAC	1 cut(s)	996
XspI	CTAG	5 cut(s)	24, 510, 915, 1097, 1541

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.