Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0005770

Physical Location & Seq

Genomic Coordinates Reverse (-)

28766563 .. 28771422

Gene Structure 4860 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG288100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGGCGGCAGCAGCAGCAGGGGCTAGAATAAACTGCTTTTTCTTAAACCCCATAAATCCCCTCAACTCCAAAACCACCACCCGTTTCACCACCCACCTCCACTTTCGTCTTTCAAGAAAAACGCCACCCACCTTTTGCACACGCGCCTCCGCCACTACTCCCGACGAAACATCCGCCGCCGCCAATGACCCTTTTGTCCTCACGACTCCTCTTTATTACGTGAACGCCCCTCCCCACATGGGCAGTGCCTACACCACCATCGCCGCCGACGCCATTGCTCGCTTCCAGAGGCTGCTGGGCAAGAGAGTCATTTTCATTACCGGGACTGATGAACACGGTGAAAAGATTGCTGCCGCTGCCGCAGCTAATGACTCCGCCCCTGCACAACACTGCGACCTCATTTCACAGTCTTACATCACTCTCTGGAAAAATTTGGATATAGGTTATGACAAGTTCATTCGGACAACTGATCCCAAGCATGAAGCGATTGTGAAGGAGTTTTACTCTAGGGTCCTTGACAATGGAGACATTTATAGGGCTGACTATCAGGGACTTTATTGTATCAACTGTGAGGAGTATAAGGATGAGAAAGAATTGCTTGAGAATAACTGTTGCCCCACGCATCTAAAGCCATGTGTTGCACGGAAAGAGGATAATTTCTTCTTTGCATTGTCCAAGTATCAGAAGCCGCTGGAAGAAACTTTGGCAAAAAATCCAAATTTCGTGCAGCCTTCATACCGTCTTAATGAGGTGCAAAGTTGGATTAAAAGCGGCCTAAGAGACTTTTCCATTTCTCGAGCATTAGTGGATTGGGGCATCCCAGTTCCTAATGATAGCAAGCAAACCATATATGTTTGGTTTGATGCTTTATTGGGTTATATATCAGCACTTTCAGAGGATATCGAGCAACCTAGTTTAGATAGAGCTGTTTCGTCAGGATGGCCTGCCTCGCTACACTTGATTGGCAAGGATATTTTACGTTTCCATGCAGTATACTGGCCAGCTATGCTAATGTCTGCTGGACTGGGCCTTCCTAAGATGGTGTTTGGCCATGGGTTTTTGACAAAGGATGGTATGAAGATGGGGAAGTCACTAGGGAATACAATTGAACCAAATGATTTGGTTCAAAATTTCGGGTCTGATGCGGTCAGGTACTTCTTCGTCAGGGAGGTGGAATTTGGTGGTGATGGGGATTATTCAGAAGATCGTTTCATCAATATTGTCAATGCTCATCTTGCCAATTCAATCGGAAATCTGCTTAACCGCACTCTGGGGCTTCTTAAGAAGAACTGCCAATCTACTTTGGTAATTGATTCAAGTATCGCAGCTGAAGGAACTACATTCAAGGACACTGTGGAGAAGTTGGTTGAAAAAGCTCGGGTTGATTATGAAAACCTCTCACTATCATCAGCTTGTGAGGCTGTTCTTGAGATCAGCAATGCTGGAAATTCATACATGGATGGGCGTGCACCATGGTCTCTCTTTAAGCAAGGGGGTGCTGCAAGTGAAGCTGCTGCAAAGGACCTTGTGATAATACTAGAAGCAATGAGGGTTATAGCTATTGCATTATCCCCCGTCACACCAAGTTTAAGTTGGAGAATATATCGACAGCTTGGCTACTCAAAGGATCAGTTTGATGCTGCTACCTGGAGTGACACCAGGTGGGGTGGACTTAAAGGTGGTCAGGTCATGGCTCAACCTCAACCAATCTTTGCAAGGATTGAAAGCCAAACAGAAGAAGAAAATAGGGTCGAAGCACCCAAAAAGGTGAAAAAGAACAAGTTACACTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004825 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006431 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009791 GO:0009908 GO:0009987 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0035670 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090567 GO:0099402 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00450 ko00970 map00450 map00970

Pfam Domains

Protein Families

Anticodon_1 tRNA-synt_1g

Protein Analysis

597

Amino Acids

66.4

Weight (kDa)

6.49

Isoelectric Point (pI)

33.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1	PF00133	59 - 276	2.8e-12	tRNA synthetases class I (I, L, M and V)
tRNA-synt_1g	PF09334	66 - 204	4.8e-40	tRNA synthetases class I (M)
tRNA-synt_1e	PF01406	77 - 232	1.6e-06	tRNA synthetases class I (C) catalytic domain
tRNA-synt_1g	PF09334	196 - 424	3e-63	tRNA synthetases class I (M)
tRNA-synt_1	PF00133	282 - 390	3.1e-10	tRNA synthetases class I (I, L, M and V)
Anticodon_3	PF19303	443 - 581	6.5e-11	Anticodon binding domain of methionyl tRNA ligase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005770)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55400 AT3G55400
fragaria_vesca	FvH4_6g24170 FvH4_6g24170 FvH4_6g51210 FvH4_6g51210 FvH4_6g51210 FvH4_6g51210
malus_domestica	MD01G1125100.v1.1 MD07G1194800.v1.1
prunus_persica	Prupe.2G232400_v2.0.a1 Prupe.2G232400_v2.0.a1
pyrus_communis	pycom01g15130 pycom07g18350 pycom07g18360
rosa_chinensis	RchiOBHm_Chr3g0482991 RchiOBHm_Chr3g0483011
rosa_laevigata	RLG00000023307 RLG00000023309
rosa_multiflora	Rmu_sc0003351.1_g000014
rosa_roxburghii	Rroxscaffold_6G00398740
rosa_rugosa	Rorug03G0202800
rosa_samantha	Rh3AG251600 Rh3BG288100 Rh3CG285600 Rh3DG281300
rosa_wichuraiana	Rw3G022730 Rw3G022760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	194
AccI	GTMKAC	1 cut(s)	993
AccII	CGCG	1 cut(s)	144
AclWI	GGATC	2 cut(s)	464, 1635
AcoI	YGGCCR	2 cut(s)	998, 1048
AcsI	RAATTY	5 cut(s)	430, 718, 1129, 1175, 1447
AcuI	CTGAAG	1 cut(s)	1350
AcyI	GRCGYC	1 cut(s)	270
AdeI	CACNNNGTG	1 cut(s)	1662
AfaI	GTAC	1 cut(s)	1154
AfiI	CCNNNNNNNGG	2 cut(s)	239, 1270
AflII	CTTAAG	1 cut(s)	1280
AgsI	TTSAA	8 cut(s)	114, 1109, 1127, 1245, 1317, 1345, 1370, 1724
AjnI	CCWGG	2 cut(s)	1646, 1658
AluBI	AGCT	9 cut(s)	365, 926, 1004, 1328, 1376, 1412, 1511, 1559, 1612
AluI	AGCT	9 cut(s)	365, 926, 1004, 1328, 1376, 1412, 1511, 1559, 1612
Alw21I	GWGCWC	1 cut(s)	1471
Alw26I	GTCTC	3 cut(s)	519, 774, 1482
Alw44I	GTGCAC	1 cut(s)	1467
AlwI	GGATC	2 cut(s)	464, 1635
AlwNI	CAGNNNCTG	1 cut(s)	292
Ama87I	CYCGRG	2 cut(s)	795, 1377
AoxI	GGCC	5 cut(s)	772, 941, 998, 1027, 1048
ApaLI	GTGCAC	1 cut(s)	1467
ApoI	RAATTY	5 cut(s)	430, 718, 1129, 1175, 1447
AspLEI	GCGC	1 cut(s)	146
AspS9I	GGNCC	3 cut(s)	511, 1027, 1522
AsuC2I	CCSGG	1 cut(s)	322
AsuHPI	GGTGA	4 cut(s)	79, 350, 1196, 1780
AvaI	CYCGRG	2 cut(s)	795, 1377
AvaII	GGWCC	2 cut(s)	511, 1522
BaeGI	GKGCMC	1 cut(s)	1471
BalI	TGGCCA	2 cut(s)	1000, 1050
BarI	GAAGNNNNNNTAC	2 cut(s)	485, 517
Bbv12I	GWGCWC	1 cut(s)	1471
BccI	CCATC	7 cut(s)	266, 933, 1033, 1064, 1075, 1181, 1454
BcgI	CGANNNNNNTGC	2 cut(s)	257, 291
BciT130I	CCWGG	2 cut(s)	1648, 1660
BcnI	CCSGG	1 cut(s)	322
BcoDI	GTCTC	3 cut(s)	519, 774, 1482
BfaI	CTAG	6 cut(s)	24, 507, 912, 1094, 1538, 1792
BfrI	CTTAAG	1 cut(s)	1280
Bme1390I	CCNGG	3 cut(s)	322, 1648, 1660
Bme18I	GGWCC	2 cut(s)	511, 1522
BmeT110I	CYCGRG	2 cut(s)	795, 1377
BmgT120I	GGNCC	3 cut(s)	511, 1027, 1522
BmiI	GGNNCC	1 cut(s)	512
BmrFI	CCNGG	3 cut(s)	322, 1648, 1660
BmrI	ACTGGG	2 cut(s)	815, 1034
BmsI	GCATC	5 cut(s)	631, 825, 853, 1132, 1627
BmuI	ACTGGG	2 cut(s)	815, 1034
BplI	GAGNNNNNCTC	2 cut(s)	488, 520
BpmI	CTGGAG	1 cut(s)	1669
BpuEI	CTTGAG	2 cut(s)	620, 1448
BpuMI	CCSGG	1 cut(s)	322
BsaAI	YACGTR	1 cut(s)	220
BsaHI	GRCGYC	1 cut(s)	270
BsaI	GGTCTC	1 cut(s)	1482
BsaJI	CCNNGG	2 cut(s)	1051, 1472
Bsc4I	CCNNNNNNNGG	2 cut(s)	239, 1270
Bse1I	ACTGG	3 cut(s)	821, 1001, 1029
Bse3DI	GCAATG	3 cut(s)	273, 1444, 1551
BseBI	CCWGG	2 cut(s)	1648, 1660
BseDI	CCNNGG	2 cut(s)	1051, 1472
BseGI	GGATG	6 cut(s)	170, 589, 816, 944, 1075, 1465
BseLI	CCNNNNNNNGG	2 cut(s)	239, 1270
BseMI	GCAATG	3 cut(s)	273, 1444, 1551
BseNI	ACTGG	3 cut(s)	821, 1001, 1029
BseRI	GAGGAG	2 cut(s)	198, 587
BseSI	GKGCMC	1 cut(s)	1471
BseYI	CCCAGC	1 cut(s)	295
BsgI	GTGCAG	2 cut(s)	366, 746
Bsh1236I	CGCG	1 cut(s)	144
BshFI	GGCC	5 cut(s)	774, 943, 1000, 1029, 1050
BsiHKAI	GWGCWC	1 cut(s)	1471
BsiHKCI	CYCGRG	2 cut(s)	795, 1377
BsiSI	CCGG	1 cut(s)	321
BslFI	GGGAC	2 cut(s)	337, 564
BslI	CCNNNNNNNGG	2 cut(s)	239, 1270
BsmAI	GTCTC	3 cut(s)	519, 774, 1482
BsmFI	GGGAC	2 cut(s)	337, 564
BsnI	GGCC	5 cut(s)	774, 943, 1000, 1029, 1050
Bso31I	GGTCTC	1 cut(s)	1482
BsoBI	CYCGRG	2 cut(s)	795, 1377
Bsp1286I	GDGCHC	1 cut(s)	1471
Bsp143I	GATC	4 cut(s)	469, 1204, 1431, 1627
Bsp19I	CCATGG	2 cut(s)	1051, 1472
BspANI	GGCC	5 cut(s)	774, 943, 1000, 1029, 1050
BspFNI	CGCG	1 cut(s)	144
BspLI	GGNNCC	1 cut(s)	512
BspPI	GGATC	2 cut(s)	464, 1635
BspTI	CTTAAG	1 cut(s)	1280
BspTNI	GGTCTC	1 cut(s)	1482
BsrDI	GCAATG	3 cut(s)	273, 1444, 1551
BsrI	ACTGG	3 cut(s)	821, 1001, 1029
BssECI	CCNNGG	2 cut(s)	1051, 1472
BssMI	GATC	4 cut(s)	469, 1204, 1431, 1627
BssNAI	GTATAC	1 cut(s)	994
BssNI	GRCGYC	1 cut(s)	270
BssT1I	CCWWGG	2 cut(s)	1051, 1472
Bst1107I	GTATAC	1 cut(s)	994
Bst2UI	CCWGG	2 cut(s)	1648, 1660
Bst4CI	ACNGT	6 cut(s)	338, 408, 569, 611, 740, 1354
BstACI	GRCGYC	1 cut(s)	270
BstAFI	CTTAAG	1 cut(s)	1280
BstBAI	YACGTR	1 cut(s)	220
BstC8I	GCNNGC	5 cut(s)	280, 839, 945, 1002, 1467
BstDEI	CTNAG	2 cut(s)	776, 1035
BstDSI	CCRYGG	2 cut(s)	1051, 1472
BstF5I	GGATG	6 cut(s)	170, 589, 816, 944, 1075, 1465
BstFNI	CGCG	1 cut(s)	144
BstHHI	GCGC	1 cut(s)	146
BstKTI	GATC	4 cut(s)	472, 1207, 1434, 1630
BstMAI	GTCTC	3 cut(s)	519, 774, 1482
BstMBI	GATC	4 cut(s)	469, 1204, 1431, 1627
BstNI	CCWGG	2 cut(s)	1648, 1660
BstSCI	CCNGG	3 cut(s)	320, 1646, 1658
BstSLI	GKGCMC	1 cut(s)	1471
BstUI	CGCG	1 cut(s)	144
BstZ17I	GTATAC	1 cut(s)	994
BsuRI	GGCC	5 cut(s)	774, 943, 1000, 1029, 1050
BtgI	CCRYGG	2 cut(s)	1051, 1472
BtgZI	GCGATG	1 cut(s)	244
BtsCI	GGATG	6 cut(s)	170, 589, 816, 944, 1075, 1465
BtsI	GCAGTG	2 cut(s)	250, 388
BtsIMutI	CAGTG	3 cut(s)	250, 388, 1350
Cac8I	GCNNGC	5 cut(s)	280, 839, 945, 1002, 1467
CaiI	CAGNNNCTG	1 cut(s)	292
CfoI	GCGC	1 cut(s)	146
Cfr13I	GGNCC	3 cut(s)	511, 1027, 1522
CseI	GACGC	1 cut(s)	278
CsiI	ACCWGGT	1 cut(s)	1658
Csp6I	GTAC	1 cut(s)	1153
CviAII	CATG	8 cut(s)	238, 479, 633, 986, 1052, 1456, 1473, 1690
CviQI	GTAC	1 cut(s)	1153
DdeI	CTNAG	2 cut(s)	776, 1035
DpnI	GATC	4 cut(s)	471, 1206, 1433, 1629
DpnII	GATC	4 cut(s)	469, 1204, 1431, 1627
DraIII	CACNNNGTG	1 cut(s)	1662
DrdI	GACNNNNNNGTC	1 cut(s)	194
DseDI	GACNNNNNNGTC	1 cut(s)	194
EaeI	YGGCCR	2 cut(s)	998, 1048
EciI	GGCGGA	3 cut(s)	139, 163, 364
Eco130I	CCWWGG	2 cut(s)	1051, 1472
Eco31I	GGTCTC	1 cut(s)	1482
Eco32I	GATATC	1 cut(s)	901
Eco47I	GGWCC	2 cut(s)	511, 1522
Eco57I	CTGAAG	1 cut(s)	1350
Eco88I	CYCGRG	2 cut(s)	795, 1377
EcoO109I	RGGNCCY	2 cut(s)	511, 1522
EcoRII	CCWGG	2 cut(s)	1646, 1658
EcoRV	GATATC	1 cut(s)	901
EcoT14I	CCWWGG	2 cut(s)	1051, 1472
ErhI	CCWWGG	2 cut(s)	1051, 1472
FaeI	CATG	8 cut(s)	241, 482, 636, 989, 1055, 1459, 1476, 1693
FalI	AAGNNNNNCTT	2 cut(s)	582, 614
FaqI	GGGAC	2 cut(s)	337, 564
FatI	CATG	8 cut(s)	237, 478, 632, 985, 1051, 1455, 1472, 1689
FblI	GTMKAC	1 cut(s)	993
FokI	GGATG	6 cut(s)	157, 596, 803, 951, 1082, 1472
FspBI	CTAG	6 cut(s)	24, 507, 912, 1094, 1538, 1792
GlaI	GCGC	1 cut(s)	145
GsaI	CCCAGC	1 cut(s)	299
GsuI	CTGGAG	1 cut(s)	1669
HaeIII	GGCC	5 cut(s)	774, 943, 1000, 1029, 1050
HapII	CCGG	1 cut(s)	321
HgaI	GACGC	1 cut(s)	278
HhaI	GCGC	1 cut(s)	146
Hin1I	GRCGYC	1 cut(s)	270
Hin1II	CATG	8 cut(s)	241, 482, 636, 989, 1055, 1459, 1476, 1693
Hin6I	GCGC	1 cut(s)	144
HinP1I	GCGC	1 cut(s)	144
HinfI	GANTC	4 cut(s)	205, 306, 371, 1313
HpaII	CCGG	1 cut(s)	321
HphI	GGTGA	4 cut(s)	79, 350, 1196, 1780
Hpy166II	GTNNAC	4 cut(s)	223, 994, 1469, 1670
Hpy188I	TCNGA	6 cut(s)	462, 684, 895, 1141, 1201, 1250
Hpy188III	TCNNGA	8 cut(s)	114, 161, 202, 286, 424, 795, 936, 1427
Hpy8I	GTNNAC	4 cut(s)	223, 994, 1469, 1670
Hpy99I	CGWCG	2 cut(s)	167, 272
HpyAV	CCTTC	4 cut(s)	487, 741, 1040, 1325
HpyCH4III	ACNGT	6 cut(s)	338, 408, 569, 611, 740, 1354
HpyCH4IV	ACGT	2 cut(s)	219, 979
HpyF3I	CTNAG	2 cut(s)	776, 1035
HpySE526I	ACGT	2 cut(s)	219, 979
Hsp92I	GRCGYC	1 cut(s)	270
Hsp92II	CATG	8 cut(s)	241, 482, 636, 989, 1055, 1459, 1476, 1693
HspAI	GCGC	1 cut(s)	144
Kzo9I	GATC	4 cut(s)	469, 1204, 1431, 1627
LweI	GCATC	5 cut(s)	631, 825, 853, 1132, 1627
MabI	ACCWGGT	1 cut(s)	1658
MaeI	CTAG	6 cut(s)	24, 507, 912, 1094, 1538, 1792
MaeII	ACGT	2 cut(s)	219, 979
MaeIII	GTNAC	4 cut(s)	1089, 1576, 1652, 1782
MalI	GATC	4 cut(s)	471, 1206, 1433, 1629
MboI	GATC	4 cut(s)	469, 1204, 1431, 1627
MboII	GAAGA	8 cut(s)	652, 707, 1090, 1150, 1214, 1297, 1748, 1751
MfeI	CAATTG	1 cut(s)	1104
MhlI	GDGCHC	1 cut(s)	1471
MlsI	TGGCCA	2 cut(s)	1000, 1050
MluNI	TGGCCA	2 cut(s)	1000, 1050
MlyI	GAGTC	3 cut(s)	199, 315, 365
MmeI	TCCRAC	2 cut(s)	740, 1574
Mox20I	TGGCCA	2 cut(s)	1000, 1050
MscI	TGGCCA	2 cut(s)	1000, 1050
MseI	TTAA	8 cut(s)	44, 744, 765, 1260, 1281, 1485, 1589, 1674
Msp20I	TGGCCA	2 cut(s)	1000, 1050
MspA1I	CMGCKG	3 cut(s)	356, 691, 1328
MspCI	CTTAAG	1 cut(s)	1280
MspI	CCGG	1 cut(s)	321
MspR9I	CCNGG	3 cut(s)	322, 1648, 1660
MunI	CAATTG	1 cut(s)	1104
MvaI	CCWGG	2 cut(s)	1648, 1660
MvnI	CGCG	1 cut(s)	144
NciI	CCSGG	1 cut(s)	322
NcoI	CCATGG	2 cut(s)	1051, 1472
NdeII	GATC	4 cut(s)	469, 1204, 1431, 1627
NlaIII	CATG	8 cut(s)	241, 482, 636, 989, 1055, 1459, 1476, 1693
NlaIV	GGNNCC	1 cut(s)	512
NmuCI	GTSAC	3 cut(s)	1089, 1576, 1652
PaeR7I	CTCGAG	1 cut(s)	795
PfeI	GAWTC	1 cut(s)	1313
PleI	GAGTC	3 cut(s)	199, 314, 365
PpsI	GAGTC	3 cut(s)	199, 314, 365
Ppu21I	YACGTR	1 cut(s)	220
PpuMI	RGGWCCY	2 cut(s)	511, 1522
Psp5II	RGGWCCY	2 cut(s)	511, 1522
Psp6I	CCWGG	2 cut(s)	1646, 1658
PspFI	CCCAGC	1 cut(s)	295
PspGI	CCWGG	2 cut(s)	1646, 1658
PspN4I	GGNNCC	1 cut(s)	512
PspPI	GGNCC	3 cut(s)	511, 1027, 1522
PspPPI	RGGWCCY	2 cut(s)	511, 1522
PstNI	CAGNNNCTG	1 cut(s)	292
PvuII	CAGCTG	1 cut(s)	1328
RsaI	GTAC	1 cut(s)	1154
RsaNI	GTAC	1 cut(s)	1153
SaqAI	TTAA	8 cut(s)	44, 744, 765, 1260, 1281, 1485, 1589, 1674
Sau3AI	GATC	4 cut(s)	469, 1204, 1431, 1627
Sau96I	GGNCC	3 cut(s)	511, 1027, 1522
SchI	GAGTC	3 cut(s)	199, 315, 365
ScrFI	CCNGG	3 cut(s)	322, 1648, 1660
SduI	GDGCHC	1 cut(s)	1471
SexAI	ACCWGGT	1 cut(s)	1658
SfaNI	GCATC	5 cut(s)	631, 825, 853, 1132, 1627
Sfr274I	CTCGAG	1 cut(s)	795
SinI	GGWCC	2 cut(s)	511, 1522
SlaI	CTCGAG	1 cut(s)	795
SmlI	CTYRAG	4 cut(s)	599, 795, 1280, 1427
SmoI	CTYRAG	4 cut(s)	599, 795, 1280, 1427
SspI	AATATT	1 cut(s)	1219
SspMI	CTAG	6 cut(s)	24, 507, 912, 1094, 1538, 1792
StyD4I	CCNGG	3 cut(s)	320, 1646, 1658
StyI	CCWWGG	2 cut(s)	1051, 1472
TaaI	ACNGT	6 cut(s)	338, 408, 569, 611, 740, 1354
TaiI	ACGT	2 cut(s)	222, 982
TaqI	TCGA	4 cut(s)	796, 903, 1606, 1752
TauI	GCSGC	8 cut(s)	8, 179, 182, 266, 356, 362, 691, 774
TfiI	GAWTC	1 cut(s)	1313
Tru1I	TTAA	8 cut(s)	44, 744, 765, 1260, 1281, 1485, 1589, 1674
Tru9I	TTAA	8 cut(s)	44, 744, 765, 1260, 1281, 1485, 1589, 1674
TscAI	CASTG	3 cut(s)	250, 395, 1357
TseFI	GTSAC	3 cut(s)	1089, 1576, 1652
Tsp45I	GTSAC	3 cut(s)	1089, 1576, 1652
TspDTI	ATGAA	9 cut(s)	304, 345, 445, 495, 723, 1091, 1201, 1404, 1440
TspGWI	ACGGA	1 cut(s)	658
TspRI	CASTG	3 cut(s)	250, 395, 1357
Vha464I	CTTAAG	1 cut(s)	1280
VneI	GTGCAC	1 cut(s)	1467
VpaK11BI	GGWCC	2 cut(s)	511, 1522
XapI	RAATTY	5 cut(s)	430, 718, 1129, 1175, 1447
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1590
XhoI	CTCGAG	1 cut(s)	795
XmiI	GTMKAC	1 cut(s)	993
XspI	CTAG	6 cut(s)	24, 507, 912, 1094, 1538, 1792

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.