Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005040

Physical Location & Seq

Genomic Coordinates Forward (+)

21449254 .. 21456026

Gene Structure 6773 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G57940.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3087 bp

ATGAGGAAGAAGGTTGATGAACGTATCAGGACTCTGATTGAAAACGGTGTCAAATTGAGACACCGTTCCATGTTTGTAATCATTGGTGACAAGTCTCGTGACCAGATAGTGAACCTCCATCATATGTTGTCAAAGGCAGTTATTAAATGTAATCCGAGTGTGTTGTGGTGCTACAAGGATAAACTTGACATTAGCAGTCATAAGCAAAAGCGTTCGAAGCAGCTGAAGAGATTGAGGGAGAGAGGACAGTTAGATCCAGAGAAACTTGACGCTTTCTCGCGTTTGCTTGATGTTGGAAGAGTCACTCATTGCTTGTACAAAGATTCTGAACGAATTCTTGGAAATACTTTTGGCATGTGCATCTTACAGGATTTTGAAGCTTTAACTCCAAATCTACTAGCAAGAACAATAGAGACTGTGGAAGGTGGTGGTTTGGTTGTATTGATATTGCGATCACTTACATCGCTTACTAGTCTATGCACTATGGTTATGGATGTCCATGACAGATTCCGAACTGAATCGCATTCTGAGGCTGCCGGCCGTTTCAATGAACGTTTTCTGCTTTCACTTGCATCTTGCAAAGCATGTGTTGTCATGGATGATGAGTTGAATATTTTGCCGCTTTCCTCGCATATCAGATCTATTACTCAAGTTCCAACAGAAAAGGATTCCGAGGGGCTCTCTGAGGCAGAGCGGGATCTGAAGAGTTTGAAAGAAGACCTAAGTGATGATTTTCCTGTTGGTCCGTTAATCAAGAAATGTTGTACATTGGATCAGGGTAAAGCTGTAGTAACATTTTTCGATGCAATTTTGGATAAGGCTCTCCGCAGCATAGTTGCTTTGATTGCAAGTCGAGGACGTGGAAAATCTGCTGCACTTGGTTTAGCTGTTGCCGGGGCTGTTGCTGCTGGGTACTCAAATATTTACATAACTGCACCAAGCCCGGATAACTTGAAGACATTCTTTGAGTTTGTTTGCAAAGGCTTTGATGCACTTGAATATAAGGAGCACCTTGATTATGATGTTGTGAAAAGTGCAAATCCTGACTTCAAAAAAGCTGTTGTACGGATAAATATCTTCAAGCAGCATAGACAAACTATCCAGTATATACAACCACACGAACATGAGAAGCTTTCACAAGTAGAGCTGTTGGTTATTGATGAAGCAGCAGCTATTCCTTTACCAGTTGTGAAGTCTTTGCTTGGTCCTTATCTAGTTTTCCTATCCTCAACTGTCAGTGGCTATGAAGGCACTGGGAGATCTTTGTCCCTGAAACTCCTCCAACAATTAGATGAGCAAAGTCGGGCTCCTGCTACTGGTCTTGAAGGCTCTGGTTGTCTTTTCAAGAAGATAGAACTTACTGAGTCTATTAGATACGGTTCTGGAGATCCAATAGAATCCTGGCTTAATGGCCTACTTTGCCTTGATGTTGCTACTTGTCTGCCTAATCCTGCGTGCCATCCTTCGCCAAGTCAGTGTGATCTCTATTATGTCAACCGAGACACACTCTTTTCTTATCACAAAGATAGTGAATTGTTTCTACAGAGAATGATGGCGCTATGTGTCTCGTCTCACTACAAGAATTCTCCTAATGATCTTCAACTGCTGGCTGATGCTCCTGCTCATCATTTGTTTGTGTTACTTGGTCCTGTTGATGAGTCCCAAAACAAGATTCCTGATATACTCTGTGTTATCCAGGTCTGTCTCGAAGGAAAGATATCTGAGAACTCTGCCCTTCAAAGTTTAAGGGATGGCCATTCACCATACGGAGACCAAATTCCATGGAAATTCTGTGAACAATTCCGGGACACTGAATTTCCAGGTTTCTCTGGTGCTCGGATAGTTCGCATAGCAGTCCACCCTAACGCCATGAAGATGGGATATGGTTCTGCTGCAGTTGAACTCTTGACCAGATATTTTGAGGGTCAGATAGCTCCAATCTCAGAAGCTGAAGATAAAGTTGATGTGGAGCATGCACCCATTAAAGTGACTGAGGCTGCTGAGAAGGTCTCCATGCTCGAGGAGCAAGTAAAGCCTCGTACAAATCTTCCACCTCTATTGGTTCCACTCCATGATCGACGACCTGAGAAGCTCCACTACATTGGTGTTTCCTTTGGGCTTACTTTGGACCTCTTCAGATTTTGGAGAAAACACAATTTTGCGCCATTCTACGTTAGCCAAATCCCAAGTGCTGTGACTGGTGAGCACACATGTATGCTTTTAAAACCCTTAAAGAATGATGAACTAGAAGTCAACGAGTCCGATGAGTTGGGATTCTTTACTCCCTTCTATAAAGATTTCAAGATAAGGTTCTCTAAGCTGTTGAGTGACAAATTCAAGAAGATGGACTATAAACTTGCAATGAGTGTCTTAAACCCCAAGATCAACTTCGCCGAGGTTGATTCTTCAGGGAGTTCATCAGGTGGATTTTTGAAGACACTCAACGGCATATTATCTCCGTATGATATGGAGAGGCTCAGAGCATATACTGAAAATCTGACTGACTTCAATCTGGTTTATGACATCTGCAAAACGCTGGCACATCAGTATTTTGAAGAGAAGCTCCCCGTATCACTGTCATATGTTCAAGCATCTATATTGCTATGCTTGGGGTTGCAGGAGACGGATTTCTCCAGCATCGAGAGACAAATGCAGTTGGAGAGGGGACAAATACATTCTCTTCTCCTGAAGGTCGCAAGGGAGTTATACAAATATCTCAATGGAGTTGCGGGAAAGGAAATCAAATCAGCTCTCCCTCGTTTGAAAGAGAGAGAGCTTACCGCTCACAATGTATCAGTCGACGATGATATCAGGGAAGGAGCAAAACAAGTCGAGGAACAAATGAAGAAGGAGAAGATTGAAGGATTAATGGATTCTGAGCTTCAACAATATGTAATTGGGGATAAAGAAGCAGAGGCTCTGCAACATTCAAAGATCTCTTCAAGTGGTATTATCAGTGTTAAGTCTACCAAATCAGAGAATGAGAACGGGTTTGACAAATCCACCAAAAAGAGAAGCAGTGATAAGCGTTCCTCTTCTTCCTCTAAATCCAAATCGTCCAAGAAGAGAAAGAGCCTGAAGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000049 GO:0000154 GO:0002097 GO:0002101 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008080 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0022613 GO:0030490 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0051391 GO:0051392 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1904812 GO:1990882 GO:1990883 GO:1990884 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

DUF1726 GNAT_acetyltr_2 Helicase_RecD tRNA_bind_2

Protein Analysis

1028

Amino Acids

115.47

Weight (kDa)

7.32

Isoelectric Point (pI)

44.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TmcA_N	PF08351	1 - 200	1.5e-17	tRNA(Met) cytidine acetyltransferase TmcA, N-terminal
NAT10_TcmA_helicase	PF05127	281 - 476	7.5e-55	RNA cytidine acetyltransferase NAT10/TcmA, helicase domain
GNAT_acetyltr_2	PF13718	516 - 740	3.8e-92	GNAT acetyltransferase 2
tRNA_bind_2	PF13725	754 - 968	1.8e-60	Possible tRNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005040)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10490 AT1G10490 AT3G57940 AT3G57940
fragaria_vesca	FvH4_1g22910 FvH4_1g22910 FvH4_1g22910 FvH4_1g22910 FvH4_1g22910 FvH4_1g22910 FvH4_1g22910 FvH4_1g22910
malus_domestica	MD05G1028000.v1.1 MD10G1028600.v1.1
prunus_persica	Prupe.6G169200_v2.0.a1
pyrus_communis	pycom05g02010 pycom10g01860
rosa_chinensis	RchiOBHm_Chr2g0117351
rosa_laevigata	RLG00000018344
rosa_multiflora	Rmu_co7970672.1_g000001 Rmu_sc0004436.1_g000001 Rmu_sc0013504.1_g000001
rosa_roxburghii	Rroxscaffold_2G00126550
rosa_rugosa	Rorug02G0212300 Rorug02G0212400
rosa_samantha	Rh2AG267400 Rh2BG279800 Rh2DG274500 Rh2DG293800
rosa_wichuraiana	Rw2G021170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	694, 2783
AccI	GTMKAC	2 cut(s)	2799, 2966
AccII	CGCG	1 cut(s)	280
AciI	CCGC	5 cut(s)	620, 694, 826, 2729, 2781
AclI	AACGTT	1 cut(s)	553
AclWI	GGATC	4 cut(s)	248, 705, 780, 1382
AcoI	YGGCCR	2 cut(s)	538, 1753
AcsI	RAATTY	6 cut(s)	333, 1582, 1776, 1787, 1814, 2333
AcuI	CTGAAG	6 cut(s)	245, 722, 1971, 2119, 2391, 2708
AfaI	GTAC	5 cut(s)	317, 766, 914, 1065, 2041
AfiI	CCNNNNNNNGG	1 cut(s)	1316
AflIII	ACRYGT	1 cut(s)	2210
AhlI	ACTAGT	1 cut(s)	470
AjiI	CACGTC	1 cut(s)	860
AjnI	CCWGG	3 cut(s)	1400, 1695, 1819
AjuI	GAANNNNNNNTTGG	6 cut(s)	321, 353, 1656, 1688, 2372, 2404
Alw21I	GWGCWC	3 cut(s)	1011, 1837, 2208
AlwI	GGATC	4 cut(s)	248, 705, 780, 1382
AlwNI	CAGNNNCTG	1 cut(s)	1949
Ama87I	CYCGRG	1 cut(s)	2018
AoxI	GGCC	3 cut(s)	538, 1411, 1753
ApoI	RAATTY	6 cut(s)	333, 1582, 1776, 1787, 1814, 2333
AseI	ATTAAT	1 cut(s)	2867
Asp700I	GAANNNNTTC	4 cut(s)	333, 555, 959, 1536
AspLEI	GCGC	2 cut(s)	1558, 2164
AspS9I	GGNCC	4 cut(s)	743, 1205, 1646, 2128
AsuC2I	CCSGG	3 cut(s)	895, 944, 1805
AsuHPI	GGTGA	3 cut(s)	98, 1752, 2213
AsuII	TTCGAA	1 cut(s)	215
AvaI	CYCGRG	1 cut(s)	2018
AvaII	GGWCC	4 cut(s)	743, 1205, 1646, 2128
BalI	TGGCCA	1 cut(s)	1755
BanII	GRGCYC	2 cut(s)	681, 1309
BarI	GAAGNNNNNNTAC	2 cut(s)	2081, 2113
BauI	CACGAG	1 cut(s)	96
BbsI	GAAGAC	3 cut(s)	723, 962, 2441
Bbv12I	GWGCWC	3 cut(s)	1011, 1837, 2208
BccI	CCATC	6 cut(s)	126, 1467, 1546, 1745, 1870, 2338
BceAI	ACGGC	2 cut(s)	525, 2461
BciT130I	CCWGG	3 cut(s)	1402, 1697, 1821
BcnI	CCSGG	3 cut(s)	895, 944, 1805
BcuI	ACTAGT	1 cut(s)	470
BfaI	CTAG	4 cut(s)	398, 471, 1214, 2246
BfmI	CTRYAG	3 cut(s)	786, 1541, 1893
BfoI	RGCGCY	1 cut(s)	1559
BglII	AGATCT	3 cut(s)	638, 1259, 2934
Bme1390I	CCNGG	6 cut(s)	895, 944, 1402, 1697, 1805, 1821
Bme18I	GGWCC	4 cut(s)	743, 1205, 1646, 2128
BmeT110I	CYCGRG	1 cut(s)	2018
BmgBI	CACGTC	1 cut(s)	860
BmgT120I	GGNCC	4 cut(s)	743, 1205, 1646, 2128
BmiI	GGNNCC	2 cut(s)	1308, 2064
BmrFI	CCNGG	6 cut(s)	895, 944, 1402, 1697, 1805, 1821
BmrI	ACTGGG	1 cut(s)	1263
BmsI	GCATC	7 cut(s)	369, 581, 793, 979, 1603, 2600, 2646
BmuI	ACTGGG	1 cut(s)	1263
BpiI	GAAGAC	3 cut(s)	723, 962, 2441
BplI	GAGNNNNNCTC	6 cut(s)	665, 697, 1491, 1523, 1994, 2026
BpmI	CTGGAG	2 cut(s)	1404, 2617
Bpu14I	TTCGAA	1 cut(s)	215
BpuEI	CTTGAG	1 cut(s)	633
BpuMI	CCSGG	3 cut(s)	895, 944, 1805
BsaBI	GATNNNNATC	1 cut(s)	1073
BsaI	GGTCTC	2 cut(s)	1764, 2014
BsaJI	CCNNGG	4 cut(s)	672, 894, 1781, 2394
Bsc4I	CCNNNNNNNGG	1 cut(s)	1316
Bse118I	RCCGGY	1 cut(s)	536
Bse1I	ACTGG	5 cut(s)	1102, 1184, 1258, 1321, 2203
Bse3DI	GCAATG	2 cut(s)	307, 2367
Bse8I	GATNNNNATC	1 cut(s)	1073
BseBI	CCWGG	3 cut(s)	1402, 1697, 1821
BseDI	CCNNGG	4 cut(s)	672, 894, 1781, 2394
BseGI	GGATG	4 cut(s)	499, 604, 1459, 1756
BseJI	GATNNNNATC	1 cut(s)	1073
BseLI	CCNNNNNNNGG	1 cut(s)	1316
BseMI	GCAATG	2 cut(s)	307, 2367
BseNI	ACTGG	5 cut(s)	1102, 1184, 1258, 1321, 2203
BseRI	GAGGAG	2 cut(s)	1268, 2036
BseX3I	CGGCCG	1 cut(s)	538
BseYI	CCCAGC	1 cut(s)	908
BsgI	GTGCAG	2 cut(s)	858, 918
Bsh1236I	CGCG	1 cut(s)	280
Bsh1285I	CGRYCG	1 cut(s)	541
BshFI	GGCC	3 cut(s)	540, 1413, 1755
BsiEI	CGRYCG	1 cut(s)	541
BsiHKAI	GWGCWC	3 cut(s)	1011, 1837, 2208
BsiHKCI	CYCGRG	1 cut(s)	2018
BsiSI	CCGG	4 cut(s)	537, 894, 944, 1804
BslFI	GGGAC	4 cut(s)	1252, 1645, 1820, 2679
BslI	CCNNNNNNNGG	1 cut(s)	1316
BsmBI	CGTCTC	2 cut(s)	1575, 2615
BsmFI	GGGAC	4 cut(s)	1252, 1645, 1820, 2679
BsmI	GAATGC	1 cut(s)	523
BsnI	GGCC	3 cut(s)	540, 1413, 1755
Bso31I	GGTCTC	2 cut(s)	1764, 2014
BsoBI	CYCGRG	1 cut(s)	2018
Bsp119I	TTCGAA	1 cut(s)	215
Bsp1286I	GDGCHC	5 cut(s)	681, 1011, 1309, 1837, 2208
Bsp1407I	TGTACA	2 cut(s)	315, 764
Bsp19I	CCATGG	1 cut(s)	1781
BspACI	CCGC	5 cut(s)	620, 694, 826, 2729, 2781
BspANI	GGCC	3 cut(s)	540, 1413, 1755
BspFNI	CGCG	1 cut(s)	280
BspLI	GGNNCC	2 cut(s)	1308, 2064
BspMAI	CTGCAG	1 cut(s)	1897
BspPI	GGATC	4 cut(s)	248, 705, 780, 1382
BspT104I	TTCGAA	1 cut(s)	215
BspTNI	GGTCTC	2 cut(s)	1764, 2014
BsrBI	CCGCTC	2 cut(s)	694, 2783
BsrDI	GCAATG	2 cut(s)	307, 2367
BsrFI	RCCGGY	1 cut(s)	536
BsrGI	TGTACA	2 cut(s)	315, 764
BsrI	ACTGG	5 cut(s)	1102, 1184, 1258, 1321, 2203
BssAI	RCCGGY	1 cut(s)	536
BssECI	CCNNGG	4 cut(s)	672, 894, 1781, 2394
BssSI	CACGAG	1 cut(s)	96
BssT1I	CCWWGG	1 cut(s)	1781
Bst2BI	CACGAG	1 cut(s)	96
Bst2UI	CCWGG	3 cut(s)	1402, 1697, 1821
Bst4CI	ACNGT	7 cut(s)	47, 65, 249, 418, 1234, 1379, 2577
Bst6I	CTCTTC	9 cut(s)	221, 292, 698, 2138, 2550, 2685, 2944, 3040, 3059
BstAUI	TGTACA	2 cut(s)	315, 764
BstBI	TTCGAA	1 cut(s)	215
BstC8I	GCNNGC	5 cut(s)	538, 1456, 1608, 1974, 2538
BstDSI	CCRYGG	1 cut(s)	1781
BstF5I	GGATG	4 cut(s)	499, 604, 1459, 1756
BstFNI	CGCG	1 cut(s)	280
BstH2I	RGCGCY	1 cut(s)	1559
BstHHI	GCGC	2 cut(s)	1558, 2164
BstMCI	CGRYCG	1 cut(s)	541
BstMWI	GCNNNNNNNGC	8 cut(s)	217, 628, 845, 905, 1248, 1419, 2023, 2032
BstNI	CCWGG	3 cut(s)	1402, 1697, 1821
BstNSI	RCATGY	4 cut(s)	358, 588, 1976, 2214
BstSCI	CCNGG	6 cut(s)	893, 942, 1400, 1695, 1803, 1819
BstSFI	CTRYAG	3 cut(s)	786, 1541, 1893
BstUI	CGCG	1 cut(s)	280
BstV2I	GAAGAC	3 cut(s)	723, 962, 2441
BstX2I	RGATCY	6 cut(s)	253, 638, 697, 1259, 1387, 2934
BstXI	CCANNNNNNTGG	2 cut(s)	1876, 2102
BstYI	RGATCY	6 cut(s)	253, 638, 697, 1259, 1387, 2934
BstZI	CGGCCG	1 cut(s)	538
BsuRI	GGCC	3 cut(s)	540, 1413, 1755
BtgI	CCRYGG	1 cut(s)	1781
BtgZI	GCGATG	1 cut(s)	447
BtrI	CACGTC	1 cut(s)	860
BtsCI	GGATG	4 cut(s)	499, 604, 1459, 1756
BtsI	GCAGTG	1 cut(s)	3025
BtsIMutI	CAGTG	7 cut(s)	1243, 1251, 1481, 1809, 2573, 2962, 3025
Cac8I	GCNNGC	5 cut(s)	538, 1456, 1608, 1974, 2538
CaiI	CAGNNNCTG	1 cut(s)	1949
CfoI	GCGC	2 cut(s)	1558, 2164
Cfr10I	RCCGGY	1 cut(s)	536
Cfr13I	GGNCC	4 cut(s)	743, 1205, 1646, 2128
CseI	GACGC	1 cut(s)	278
Csp6I	GTAC	5 cut(s)	316, 765, 913, 1064, 2040
CspCI	CAANNNNNGTGG	2 cut(s)	2040, 2075
CviQI	GTAC	5 cut(s)	316, 765, 913, 1064, 2040
DraI	TTTAAA	1 cut(s)	2223
EaeI	YGGCCR	2 cut(s)	538, 1753
EagI	CGGCCG	1 cut(s)	538
Eam1104I	CTCTTC	9 cut(s)	221, 292, 698, 2138, 2550, 2685, 2944, 3040, 3059
EarI	CTCTTC	9 cut(s)	221, 292, 698, 2138, 2550, 2685, 2944, 3040, 3059
EclXI	CGGCCG	1 cut(s)	538
Eco130I	CCWWGG	1 cut(s)	1781
Eco24I	GRGCYC	2 cut(s)	681, 1309
Eco31I	GGTCTC	2 cut(s)	1764, 2014
Eco32I	GATATC	2 cut(s)	1719, 2809
Eco47I	GGWCC	4 cut(s)	743, 1205, 1646, 2128
Eco52I	CGGCCG	1 cut(s)	538
Eco57I	CTGAAG	6 cut(s)	245, 722, 1971, 2119, 2391, 2708
Eco88I	CYCGRG	1 cut(s)	2018
EcoRI	GAATTC	2 cut(s)	333, 1582
EcoRII	CCWGG	3 cut(s)	1400, 1695, 1819
EcoRV	GATATC	2 cut(s)	1719, 2809
EcoT14I	CCWWGG	1 cut(s)	1781
EcoT38I	GRGCYC	2 cut(s)	681, 1309
ErhI	CCWWGG	1 cut(s)	1781
Esp3I	CGTCTC	2 cut(s)	1575, 2615
FalI	AAGNNNNNCTT	4 cut(s)	947, 979, 2372, 2404
FaqI	GGGAC	4 cut(s)	1252, 1645, 1820, 2679
FauI	CCCGC	2 cut(s)	687, 2722
FauNDI	CATATG	2 cut(s)	123, 2581
FblI	GTMKAC	2 cut(s)	2799, 2966
FokI	GGATG	4 cut(s)	506, 611, 1446, 1763
FriOI	GRGCYC	2 cut(s)	681, 1309
FspBI	CTAG	4 cut(s)	398, 471, 1214, 2246
GlaI	GCGC	2 cut(s)	1557, 2163
GsaI	CCCAGC	1 cut(s)	912
GsuI	CTGGAG	2 cut(s)	1404, 2617
HaeII	RGCGCY	1 cut(s)	1559
HaeIII	GGCC	3 cut(s)	540, 1413, 1755
HapII	CCGG	4 cut(s)	537, 894, 944, 1804
HgaI	GACGC	1 cut(s)	278
HhaI	GCGC	2 cut(s)	1558, 2164
Hin6I	GCGC	2 cut(s)	1556, 2162
HinP1I	GCGC	2 cut(s)	1556, 2162
HincII	GTYRAC	3 cut(s)	1495, 2254, 2800
HindII	GTYRAC	3 cut(s)	1495, 2254, 2800
HindIII	AAGCTT	2 cut(s)	378, 1130
HpaII	CCGG	4 cut(s)	537, 894, 944, 1804
HphI	GGTGA	3 cut(s)	98, 1752, 2213
Hpy166II	GTNNAC	7 cut(s)	112, 1495, 1796, 1858, 2254, 2800, 2967
Hpy8I	GTNNAC	7 cut(s)	112, 1495, 1796, 1858, 2254, 2800, 2967
Hpy99I	CGWCG	2 cut(s)	2082, 2804
HpyCH4III	ACNGT	7 cut(s)	47, 65, 249, 418, 1234, 1379, 2577
HpyCH4IV	ACGT	4 cut(s)	22, 553, 859, 2172
HpyF10VI	GCNNNNNNNGC	8 cut(s)	217, 628, 845, 905, 1248, 1419, 2023, 2032
HpySE526I	ACGT	4 cut(s)	22, 553, 859, 2172
HspAI	GCGC	2 cut(s)	1556, 2162
KroI	GCCGGC	1 cut(s)	536
KroNI	GCCGGC	1 cut(s)	538
LmnI	GCTCC	9 cut(s)	1006, 1312, 1621, 1939, 1969, 2023, 2097, 2568, 2819
LweI	GCATC	7 cut(s)	369, 581, 793, 979, 1603, 2600, 2646
MaeI	CTAG	4 cut(s)	398, 471, 1214, 2246
MaeII	ACGT	4 cut(s)	22, 553, 859, 2172
MaeIII	GTNAC	8 cut(s)	86, 98, 301, 790, 1638, 1987, 2194, 2327
MbiI	CCGCTC	2 cut(s)	694, 2783
MflI	RGATCY	6 cut(s)	253, 638, 697, 1259, 1387, 2934
MhlI	GDGCHC	5 cut(s)	681, 1011, 1309, 1837, 2208
MlsI	TGGCCA	1 cut(s)	1755
MluNI	TGGCCA	1 cut(s)	1755
MlyI	GAGTC	5 cut(s)	25, 309, 1373, 1667, 2267
MmeI	TCCRAC	4 cut(s)	274, 680, 1306, 2637
Mox20I	TGGCCA	1 cut(s)	1755
MroNI	GCCGGC	1 cut(s)	536
MroXI	GAANNNNTTC	4 cut(s)	333, 555, 959, 1536
MscI	TGGCCA	1 cut(s)	1755
MslI	CAYNNNNRTG	4 cut(s)	1122, 1874, 1985, 2213
Msp20I	TGGCCA	1 cut(s)	1755
MspA1I	CMGCKG	1 cut(s)	223
MspI	CCGG	4 cut(s)	537, 894, 944, 1804
MspR9I	CCNGG	6 cut(s)	895, 944, 1402, 1697, 1805, 1821
Mva1269I	GAATGC	1 cut(s)	523
MvaI	CCWGG	3 cut(s)	1402, 1697, 1821
MvnI	CGCG	1 cut(s)	280
MwoI	GCNNNNNNNGC	8 cut(s)	217, 628, 845, 905, 1248, 1419, 2023, 2032
NaeI	GCCGGC	1 cut(s)	538
NciI	CCSGG	3 cut(s)	895, 944, 1805
NcoI	CCATGG	1 cut(s)	1781
NdeI	CATATG	2 cut(s)	123, 2581
NgoMIV	GCCGGC	1 cut(s)	536
NlaIV	GGNNCC	2 cut(s)	1308, 2064
NmeAIII	GCCGAG	1 cut(s)	2419
NmuCI	GTSAC	6 cut(s)	86, 98, 301, 1987, 2194, 2327
NspI	RCATGY	4 cut(s)	358, 588, 1976, 2214
NspV	TTCGAA	1 cut(s)	215
PaeI	GCATGC	1 cut(s)	1976
PaeR7I	CTCGAG	1 cut(s)	2018
PciI	ACATGT	1 cut(s)	2210
PctI	GAATGC	1 cut(s)	523
PdiI	GCCGGC	1 cut(s)	538
PdmI	GAANNNNTTC	4 cut(s)	333, 555, 959, 1536
PfeI	GAWTC	9 cut(s)	323, 507, 518, 668, 1397, 1672, 2274, 2402, 2873
PfoI	TCCNGGA	1 cut(s)	1803
PleI	GAGTC	5 cut(s)	25, 308, 1372, 1666, 2266
PpsI	GAGTC	5 cut(s)	25, 308, 1372, 1666, 2266
PscI	ACATGT	1 cut(s)	2210
PshBI	ATTAAT	1 cut(s)	2867
Psp1406I	AACGTT	1 cut(s)	553
Psp6I	CCWGG	3 cut(s)	1400, 1695, 1819
PspFI	CCCAGC	1 cut(s)	908
PspGI	CCWGG	3 cut(s)	1400, 1695, 1819
PspN4I	GGNNCC	2 cut(s)	1308, 2064
PspPI	GGNCC	4 cut(s)	743, 1205, 1646, 2128
PspXI	VCTCGAGB	1 cut(s)	2018
PstI	CTGCAG	1 cut(s)	1897
PstNI	CAGNNNCTG	1 cut(s)	1949
PsuI	RGATCY	6 cut(s)	253, 638, 697, 1259, 1387, 2934
PvuII	CAGCTG	1 cut(s)	223
RsaI	GTAC	5 cut(s)	317, 766, 914, 1065, 2041
RsaNI	GTAC	5 cut(s)	316, 765, 913, 1064, 2040
RseI	CAYNNNNRTG	4 cut(s)	1122, 1874, 1985, 2213
SalI	GTCGAC	1 cut(s)	2798
Sau96I	GGNCC	4 cut(s)	743, 1205, 1646, 2128
SchI	GAGTC	5 cut(s)	25, 309, 1373, 1667, 2267
ScrFI	CCNGG	6 cut(s)	895, 944, 1402, 1697, 1805, 1821
SduI	GDGCHC	5 cut(s)	681, 1011, 1309, 1837, 2208
SfaNI	GCATC	7 cut(s)	369, 581, 793, 979, 1603, 2600, 2646
SfcI	CTRYAG	3 cut(s)	786, 1541, 1893
Sfr274I	CTCGAG	1 cut(s)	2018
SfuI	TTCGAA	1 cut(s)	215
SinI	GGWCC	4 cut(s)	743, 1205, 1646, 2128
SlaI	CTCGAG	1 cut(s)	2018
SmiMI	CAYNNNNRTG	4 cut(s)	1122, 1874, 1985, 2213
SmlI	CTYRAG	2 cut(s)	648, 2018
SmoI	CTYRAG	2 cut(s)	648, 2018
SpeI	ACTAGT	1 cut(s)	470
SphI	GCATGC	1 cut(s)	1976
SsiI	CCGC	5 cut(s)	620, 694, 826, 2729, 2781
SspI	AATATT	2 cut(s)	613, 922
SspMI	CTAG	4 cut(s)	398, 471, 1214, 2246
StyD4I	CCNGG	6 cut(s)	893, 942, 1400, 1695, 1803, 1819
StyI	CCWWGG	1 cut(s)	1781
TaaI	ACNGT	7 cut(s)	47, 65, 249, 418, 1234, 1379, 2577
TaiI	ACGT	4 cut(s)	25, 556, 862, 2175
TaqI	TCGA	9 cut(s)	215, 801, 853, 1707, 2019, 2077, 2640, 2799, 2832
TatI	WGTACW	2 cut(s)	315, 764
TauI	GCSGC	1 cut(s)	622
TfiI	GAWTC	9 cut(s)	323, 507, 518, 668, 1397, 1672, 2274, 2402, 2873
TscAI	CASTG	7 cut(s)	1243, 1258, 1481, 1816, 2580, 2962, 3025
TseFI	GTSAC	6 cut(s)	86, 98, 301, 1987, 2194, 2327
Tsp45I	GTSAC	6 cut(s)	86, 98, 301, 1987, 2194, 2327
TspDTI	ATGAA	8 cut(s)	33, 564, 1176, 1260, 1886, 2256, 2406, 2858
TspGWI	ACGGA	5 cut(s)	735, 1081, 1782, 2448, 2639
TspRI	CASTG	7 cut(s)	1243, 1258, 1481, 1816, 2580, 2962, 3025
VpaK11BI	GGWCC	4 cut(s)	743, 1205, 1646, 2128
VspI	ATTAAT	1 cut(s)	2867
XapI	RAATTY	6 cut(s)	333, 1582, 1776, 1787, 1814, 2333
XceI	RCATGY	4 cut(s)	358, 588, 1976, 2214
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1398
XhoI	CTCGAG	1 cut(s)	2018
XmiI	GTMKAC	2 cut(s)	2799, 2966
XmnI	GAANNNNTTC	4 cut(s)	333, 555, 959, 1536
XspI	CTAG	4 cut(s)	398, 471, 1214, 2246

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.