Rmu_co7970672.1_g000001

RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co7970672.1
Physical Location & Seq
Forward (+)
1 .. 508
508 bp
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UTR
Exon/CDS
Intron
Rmu_co7970672.1_g000001.1.cds

Sequence Viewer

Length: 326 bp
actctaatggaacctcacaaaatctctgtcgatgaggatcttgaaaatgctgcgagagaagttgaggatcaaatgagatccaaatcgttaaatcaacaagatgcaattgaggacgaagatgcgttaaatcccgagttatttcaacaatatgcaattaaggacgaagatgcagagtttgcaaatgctctgcagaatggtagacagataccaagggatggtgttattagtgtgaaatcaagtagaaaagaaaaagaggagcatagaaaacatagagagagtgacaagggtggaaacagacgtggtagagatgagcatggctccacctc

Protein Analysis

109

Amino Acids

12.49

Weight (kDa)

5.01

Isoelectric Point (pI)

45.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 215
AccI GTMKAC 1 cut(s) 199
AclWI GGATC 3 cut(s) 45, 72, 75
AfiI CCNNNNNNNGG 1 cut(s) 215
AgsI TTSAA 2 cut(s) 44, 143
AjiI CACGTC 1 cut(s) 299
AlwI GGATC 3 cut(s) 45, 72, 75
Ama87I CYCGRG 1 cut(s) 131
ApeKI GCWGC 1 cut(s) 50
ArsI GACNNNNNNTTYG 2 cut(s) 12, 44
AvaI CYCGRG 1 cut(s) 131
BbvI GCAGC 1 cut(s) 37
BccI CCATC 1 cut(s) 209
BfmI CTRYAG 1 cut(s) 188
BisI GCNGC 1 cut(s) 51
BlsI GCNGC 1 cut(s) 52
BmeT110I CYCGRG 1 cut(s) 131
BmgBI CACGTC 1 cut(s) 299
BmiI GGNNCC 2 cut(s) 12, 319
BmsI GCATC 3 cut(s) 91, 109, 157
BplI GAGNNNNNCTC 1 cut(s) 302
BsaBI GATNNNNATC 2 cut(s) 36, 82
BsaJI CCNNGG 1 cut(s) 209
Bsc4I CCNNNNNNNGG 1 cut(s) 215
Bse8I GATNNNNATC 2 cut(s) 36, 82
BseDI CCNNGG 1 cut(s) 209
BseGI GGATG 1 cut(s) 220
BseJI GATNNNNATC 2 cut(s) 36, 82
BseLI CCNNNNNNNGG 1 cut(s) 215
BseRI GAGGAG 1 cut(s) 269
BseXI GCAGC 1 cut(s) 37
BsiHKCI CYCGRG 1 cut(s) 131
BslI CCNNNNNNNGG 1 cut(s) 215
BsoBI CYCGRG 1 cut(s) 131
Bsp143I GATC 3 cut(s) 37, 67, 77
BspLI GGNNCC 2 cut(s) 12, 319
BspMAI CTGCAG 1 cut(s) 192
BspPI GGATC 3 cut(s) 45, 72, 75
BssECI CCNNGG 1 cut(s) 209
BssMI GATC 3 cut(s) 37, 67, 77
BssT1I CCWWGG 1 cut(s) 209
BstAPI GCANNNNNTGC 1 cut(s) 176
BstF5I GGATG 1 cut(s) 220
BstKTI GATC 3 cut(s) 40, 70, 80
BstMBI GATC 3 cut(s) 37, 67, 77
BstMWI GCNNNNNNNGC 1 cut(s) 176
BstSFI CTRYAG 1 cut(s) 188
BstV1I GCAGC 1 cut(s) 37
BstX2I RGATCY 2 cut(s) 37, 77
BstYI RGATCY 2 cut(s) 37, 77
BtrI CACGTC 1 cut(s) 299
BtsCI GGATG 1 cut(s) 220
CviAII CATG 1 cut(s) 314
CviJI RGCY 1 cut(s) 318
CviKI_1 RGCY 1 cut(s) 318
DpnI GATC 3 cut(s) 39, 69, 79
DpnII GATC 3 cut(s) 37, 67, 77
Eco130I CCWWGG 1 cut(s) 209
Eco88I CYCGRG 1 cut(s) 131
EcoT14I CCWWGG 1 cut(s) 209
ErhI CCWWGG 1 cut(s) 209
FaeI CATG 1 cut(s) 317
FaiI YATR 4 cut(s) 150, 261, 270, 315
FatI CATG 1 cut(s) 313
FblI GTMKAC 1 cut(s) 199
Fnu4HI GCNGC 1 cut(s) 51
FokI GGATG 1 cut(s) 227
Fsp4HI GCNGC 1 cut(s) 51
GluI GCNGC 1 cut(s) 51
Hin1II CATG 1 cut(s) 317
Hpy166II GTNNAC 1 cut(s) 200
Hpy188III TCNNGA 2 cut(s) 41, 131
Hpy8I GTNNAC 1 cut(s) 200
HpyCH4IV ACGT 1 cut(s) 298
HpyCH4V TGCA 5 cut(s) 104, 152, 170, 179, 190
HpyF10VI GCNNNNNNNGC 1 cut(s) 176
HpySE526I ACGT 1 cut(s) 298
Hsp92II CATG 1 cut(s) 317
Kzo9I GATC 3 cut(s) 37, 67, 77
LmnI GCTCC 2 cut(s) 256, 323
Lsp1109I GCAGC 1 cut(s) 37
LweI GCATC 3 cut(s) 91, 109, 157
MaeII ACGT 1 cut(s) 298
MaeIII GTNAC 1 cut(s) 278
MalI GATC 3 cut(s) 39, 69, 79
MboI GATC 3 cut(s) 37, 67, 77
MboII GAAGA 2 cut(s) 128, 176
MfeI CAATTG 1 cut(s) 105
MflI RGATCY 2 cut(s) 37, 77
MluCI AATT 2 cut(s) 105, 153
MnlI CCTC 5 cut(s) 24, 28, 58, 103, 247
MseI TTAA 3 cut(s) 89, 125, 156
MunI CAATTG 1 cut(s) 105
MwoI GCNNNNNNNGC 1 cut(s) 176
NdeII GATC 3 cut(s) 37, 67, 77
NlaIII CATG 1 cut(s) 317
NlaIV GGNNCC 2 cut(s) 12, 319
NmuCI GTSAC 1 cut(s) 278
PflMI CCANNNNNTGG 1 cut(s) 215
PkrI GCNGC 1 cut(s) 52
PspN4I GGNNCC 2 cut(s) 12, 319
PstI CTGCAG 1 cut(s) 192
PsuI RGATCY 2 cut(s) 37, 77
SaqAI TTAA 3 cut(s) 89, 125, 156
SatI GCNGC 1 cut(s) 51
Sau3AI GATC 3 cut(s) 37, 67, 77
SetI ASST 3 cut(s) 16, 301, 326
SfaNI GCATC 3 cut(s) 91, 109, 157
SfcI CTRYAG 1 cut(s) 188
SgeI CNNG 9 cut(s) 53, 66, 110, 143, 145, 222, 249, 295, 311
Sse9I AATT 2 cut(s) 105, 153
StyI CCWWGG 1 cut(s) 209
TaiI ACGT 1 cut(s) 301
TaqI TCGA 1 cut(s) 30
TasI AATT 2 cut(s) 105, 153
Tru1I TTAA 3 cut(s) 89, 125, 156
Tru9I TTAA 3 cut(s) 89, 125, 156
TseFI GTSAC 1 cut(s) 278
TseI GCWGC 1 cut(s) 50
Tsp45I GTSAC 1 cut(s) 278
Van91I CCANNNNNTGG 1 cut(s) 215
XmiI GTMKAC 1 cut(s) 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.