Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0005040

Physical Location & Seq

Genomic Coordinates Reverse (-)

14829977 .. 14840653

Gene Structure 10677 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g22910.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3099 bp

ATGAGGAAGAAGGTCGACGAGCGCATCCGAACCCTGATAAGCAATGGCGTCAAAAACAAGCACCGCTCCATGTTCGTCATTGTCGGCGACAAGTCACGTGACCAGATTGTGAATCTTCACTATATGCTCAGCAATGAGTTGAAGAAATCAAGGCCTACTGTGTTGTGGTGCTACAAGGACAAGCTTGAGCTCAGCAGTCACAAGAAGAAACGTGCTAAGCAGGTGAAGAAGCTGATGCAGAGGGGCCTGCTTGACCCCGAGAAGGTTGATCCCTTCTCTCTTTTTATAGAGAGCAGCGGAGTGACGTATTGCTTGTACAAGGATTCCGAGAGAGTTCTTGGTAATACTTTCGGAATGTGTATACTTCAGGATTTCGAGGCCTTGACACCGAATCTACTAGCTAGAACAATAGAGACCGTGGAGGGTGGCGGACTAATCATACTGTTGCTTCGTTCTTTGACCTCACTCACCAACTTATACACCATGGTTATGGATGTCCACGACAGGTTTAGAACCGAATCCCATTCCCAGGCTACTGGCCGTTTTAATGAGCGTTTCTTATTATCACTTGCATCGTGCAAAGCATGTGTGGTTATGGATGATGAACTGAATATTCTACCAGTTTCATCTCACATAAGGTCAATTACCCCAGTGCCAGTTAACGAGGACTCTGAAGGGATATCAGAGTCAGAAAGGGAATTGAAGGATCTAAAAGAACAACTAAGTGATGCCTACCCCGTTGGCCCTTTAATAAAGAAATGTTGCACGCTTGACCAGGGAAATGCTGTTGCTACATTTCTGGATGCAATATTGGATAAGGCACTCCGAAGTACTGTTGCCTTGCTTGCTGCTCGTGGCCGTGGGAAATCAGCTGCACTTGGTTTGGCTATTGCTGGAGCTATTGCTGCAGGGTATTCAAATATCTTTGTAACTGCACCGAGCCCTGAGAACTTGAAAACCTTGTTCGAATTTGTTTGCAAGGGTTTGGATGCATTGGATTATAAGGAACATTTAGATTATGATGTGGAGAAAAGTTCTAACCCTGCGATGAAGAAAGCAACTCTAAAGATCAACATATTCAAGCAGCACAGACAAACAATTCAGTATATCCAGCCCCATGAGCATGAAAAACTTTCCCAAGTTGAGTTATTGGTTGTTGATGAGGCTGCTGCTATTCCACTTCCAGTGGTGAAGTCTTTGCTTGGCCCTTATCTGGTCTTCCTTTCATCTACTGTCAATGGCTATGAAGGTACTGGTCGGTCTCTGTCTCTGAAGCTTCTACAGCAATTGGAAGAGCAAAGCCAGATGTCTGCTAATGGCCCTATATCTGGTCGACTTTTCAAAAAGATAGAATTAAAAGAATCAATCAGATATGCTTCTGGTGACCCAGTTGAATCCTGGCTTGGCGGTTTACTTTGTTTGGATATCACCAATTCCATTCCTAAGCTTAACGGGTTACCTGCACCTAATGAATGTGATCTCTACTATGTGAACCGTGATACACTTTTTTCATATCATAAAGATAGTGAGATGTTCTTACAGAGAATGATGGCGCTATATGTTGCCTCTCACTACAAGAATTCTCCAAATGATTTGCAACTAATGGCTGATGCTCCAGCGCATCACTTGTTCGTATTGCTTGGTCCTGTTGACGAGTCAAAAAATCAACTTCCTGATATTTTGTGTGTTGTTCAGGTGAGCCTGGAGGGACAGATTTCTCGTAAATCTGCAATCAAAAGTTTAAGTGATGGTCATCAGCCTTCTGGTGATCAGCTACCATGGAAGTTCTGTGAGCAATTTCAGGACACAGTTTTTCCCACTCTTTCAGGAGCTCGCATTGTTAGAATTGCTACCCATCCAAGTGCCATGAAGATTGGTTATGGTTCACAAGCTGTAGAACTATTGACAAGGTACTATGAAGGACAGTTCGCTCCTATTTCCGAAACGGATGTCGAAGAAGTTGAGGCGCCAGCTGTCAGTGTGATTGAAGCTGCCAAGAAGGTTTCATTGCTAGAGGAAACTATAAAACCCAGAACAGATCTTCCCCATTTGTTGGTACATCTTCGTGAAAGACGACCAGAGAAACTTCATTACATCGGTGTCTCCTTTGGGCTTACCTTGGACCTTTTCCGTTTTTGGAGTAAACATAAATTTGCTCCATTCTATATTGGGCATATTCCAAGTGCTGTGACGGGTGAGCACACATGTATGGTCCTGAAATCGTTGAACAGTGATGACCTTGAAGTTAGTGATTTTCATGCATTTTACCTAGATTTCAGGCGAAGGTTTCTCAGACTATTAGGTGTTAGTTTCCAGGCGATGGATTATAGGCTCGCAATGAGCATCTTAGATCCGAAGATCAATTTCAAAGAGCTAGAACCAACATCAAAAACCTCAAATGGATTCTTAAAGTCGACTAAAGATTTCTTCTCGCCTTATGATATGAAGCGACTGGAAGCATATACAAACCATCTTGCTGACTTTCATATGATATTGGATCTTGTTCGTACCATTTCAGATCTCTATTTTCAAGAAAAACTTCCCGTAACATTGTCATATGCTCAAGCTTCAATTTTGCTGTGCATTGGCCTGCAAAGTCGAGATATCTCCTATATTGAGGGGGTGATGAAATTAGAAAGGCAGCAGATATTGTCACTGTTTATAAAAGTTATCAAGAAGGTCTACAAATATTTGTACTCTGTTGCATCTGAGGAGATTCAGTCAACCTTTCCTCAACCAAAAGATACTGTGATGGAACCTCACAAAATCTCTGTCGATGAGGATCTCAACAATGCTGCTAGAGAAGTTGAGAATCAAATGAGATCCAAGGCAGAGCAATCATCAAACCCCAATGAAGATGCATTAGATCTTGCATTATTTCGAGAATATGCAATTGAGGATGAAGATGCAGAGTTTGAGAATGCTCTGCAGAATGGTAAACAGATACCAAAGGATGGTGTTATTAGTGTGAAATCAAGTAGAAAAGAAAAAGAGGAGCGTGGAAAACATAGAGAGAGTGACAAGAGTGGAAACAGACGAGGTAGAGATGAGCATGGCTCCACCTCGAAGTCAAAAAAGAAGAGGAAATCTTCACACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000049 GO:0000154 GO:0002097 GO:0002101 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008080 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0022613 GO:0030490 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0051391 GO:0051392 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1904812 GO:1990882 GO:1990883 GO:1990884 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

DUF1726 GNAT_acetyltr_2 Helicase_RecD tRNA_bind_2

Protein Analysis

1033

Amino Acids

116.46

Weight (kDa)

7.36

Isoelectric Point (pI)

45.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TmcA_N	PF08351	1 - 200	8e-20	tRNA(Met) cytidine acetyltransferase TmcA, N-terminal
NAT10_TcmA_helicase	PF05127	281 - 475	1.1e-56	RNA cytidine acetyltransferase NAT10/TcmA, helicase domain
GNAT_acetyltr_2	PF13718	515 - 743	2.5e-95	GNAT acetyltransferase 2
tRNA_bind_2	PF13725	753 - 915	4.8e-56	Possible tRNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005040)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10490 AT1G10490 AT3G57940 AT3G57940
fragaria_vesca	FvH4_1g22910 FvH4_1g22910 FvH4_1g22910 FvH4_1g22910 FvH4_1g22910 FvH4_1g22910 FvH4_1g22910 FvH4_1g22910
malus_domestica	MD05G1028000.v1.1 MD10G1028600.v1.1
prunus_persica	Prupe.6G169200_v2.0.a1
pyrus_communis	pycom05g02010 pycom10g01860
rosa_chinensis	RchiOBHm_Chr2g0117351
rosa_laevigata	RLG00000018344
rosa_multiflora	Rmu_co7970672.1_g000001 Rmu_sc0004436.1_g000001 Rmu_sc0013504.1_g000001
rosa_roxburghii	Rroxscaffold_2G00126550
rosa_rugosa	Rorug02G0212300 Rorug02G0212400
rosa_samantha	Rh2AG267400 Rh2BG279800 Rh2DG274500 Rh2DG293800
rosa_wichuraiana	Rw2G021170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1002, 2663
AarI	CACCTGC	1 cut(s)	211
Acc36I	ACCTGC	2 cut(s)	211, 1468
AccB1I	GGYRCC	1 cut(s)	1966
AccB7I	CCANNNNNTGG	3 cut(s)	2053, 2320, 2954
AccBSI	CCGCTC	1 cut(s)	66
AccI	GTMKAC	5 cut(s)	15, 361, 1333, 2414, 2682
AciI	CCGC	4 cut(s)	64, 297, 429, 1407
AclWI	GGATC	6 cut(s)	263, 714, 2345, 2505, 2790, 2817
AcoI	YGGCCR	2 cut(s)	538, 856
AcsI	RAATTY	3 cut(s)	968, 1579, 2150
AcuI	CTGAAG	3 cut(s)	350, 693, 1292
AcvI	CACGTG	1 cut(s)	98
AcyI	GRCGYC	2 cut(s)	48, 1967
AfaI	GTAC	7 cut(s)	317, 832, 1252, 1913, 2058, 2509, 2696
AfiI	CCNNNNNNNGG	7 cut(s)	262, 529, 1213, 1328, 2053, 2320, 2954
AflIII	ACRYGT	1 cut(s)	2204
AjnI	CCWGG	5 cut(s)	528, 774, 1397, 1701, 2313
AjuI	GAANNNNNNNTTGG	2 cut(s)	1386, 1418
AloI	GAACNNNNNNTCC	2 cut(s)	2026, 2058
Alw21I	GWGCWC	3 cut(s)	192, 1834, 2202
Alw26I	GTCTC	4 cut(s)	407, 1266, 1272, 2107
AlwI	GGATC	6 cut(s)	263, 714, 2345, 2505, 2790, 2817
Ama87I	CYCGRG	1 cut(s)	257
AoxI	GGCC	9 cut(s)	152, 244, 378, 538, 742, 856, 1204, 1318, 2587
ApoI	RAATTY	3 cut(s)	968, 1579, 2150
ArsI	GACNNNNNNTTYG	4 cut(s)	1935, 1967, 2757, 2789
Asp700I	GAANNNNTTC	1 cut(s)	2538
AspLEI	GCGC	4 cut(s)	24, 1555, 1621, 1969
AspS9I	GGNCC	7 cut(s)	244, 743, 1205, 1319, 1643, 2122, 2212
AsuHPI	GGTGA	9 cut(s)	235, 460, 1201, 1394, 1420, 1708, 1778, 2207, 2635
AsuII	TTCGAA	1 cut(s)	966
AvaI	CYCGRG	1 cut(s)	257
AvaII	GGWCC	3 cut(s)	1643, 2122, 2212
BanI	GGYRCC	1 cut(s)	1966
BanII	GRGCYC	3 cut(s)	192, 944, 1834
BauI	CACGAG	1 cut(s)	852
BbrPI	CACGTG	1 cut(s)	98
BbsI	GAAGAC	1 cut(s)	1210
Bbv12I	GWGCWC	3 cut(s)	192, 1834, 2202
BccI	CCATC	7 cut(s)	1543, 1742, 1863, 2314, 2478, 2746, 2948
BceAI	ACGGC	2 cut(s)	525, 843
BciT130I	CCWGG	5 cut(s)	530, 776, 1399, 1703, 2315
BclI	TGATCA	1 cut(s)	1768
BcoDI	GTCTC	4 cut(s)	407, 1266, 1272, 2107
BfaI	CTAG	6 cut(s)	398, 402, 2012, 2270, 2375, 2799
BfmI	CTRYAG	4 cut(s)	906, 1280, 1893, 2927
BfoI	RGCGCY	2 cut(s)	1556, 1970
BfuAI	ACCTGC	2 cut(s)	211, 1468
BglII	AGATCT	3 cut(s)	2038, 2518, 2866
BlpI	GCTNAGC	3 cut(s)	128, 191, 216
BmcAI	AGTACT	1 cut(s)	832
Bme1390I	CCNGG	5 cut(s)	530, 776, 1399, 1703, 2315
Bme18I	GGWCC	3 cut(s)	1643, 2122, 2212
BmeT110I	CYCGRG	1 cut(s)	257
BmgT120I	GGNCC	7 cut(s)	244, 743, 1205, 1319, 1643, 2122, 2212
BmiI	GGNNCC	4 cut(s)	245, 1968, 2757, 3058
BmrFI	CCNGG	5 cut(s)	530, 776, 1399, 1703, 2315
BmrI	ACTGGG	2 cut(s)	644, 1382
BmuI	ACTGGG	2 cut(s)	644, 1382
BpiI	GAAGAC	1 cut(s)	1210
BplI	GAGNNNNNCTC	2 cut(s)	3041, 3073
BpmI	CTGGAG	3 cut(s)	915, 1599, 1724
Bpu10I	CCTNAGC	1 cut(s)	1443
Bpu1102I	GCTNAGC	3 cut(s)	128, 191, 216
Bpu14I	TTCGAA	1 cut(s)	966
BpuEI	CTTGAG	2 cut(s)	206, 2547
BsaAI	YACGTR	1 cut(s)	98
BsaBI	GATNNNNATC	2 cut(s)	1752, 2781
BsaHI	GRCGYC	2 cut(s)	48, 1967
BsaI	GGTCTC	2 cut(s)	407, 1266
BsaJI	CCNNGG	8 cut(s)	417, 483, 528, 775, 859, 1778, 2118, 2826
BsaXI	ACNNNNNCTCC	2 cut(s)	2705, 2735
Bsc4I	CCNNNNNNNGG	7 cut(s)	262, 529, 1213, 1328, 2053, 2320, 2954
Bse1I	ACTGG	8 cut(s)	541, 620, 650, 656, 1184, 1258, 1388, 2457
Bse3DI	GCAATG	4 cut(s)	49, 139, 2006, 2343
Bse8I	GATNNNNATC	2 cut(s)	1752, 2781
BseBI	CCWGG	5 cut(s)	530, 776, 1399, 1703, 2315
BseDI	CCNNGG	8 cut(s)	417, 483, 528, 775, 859, 1778, 2118, 2826
BseGI	GGATG	9 cut(s)	24, 499, 604, 808, 994, 1855, 1954, 2905, 2959
BseJI	GATNNNNATC	2 cut(s)	1752, 2781
BseLI	CCNNNNNNNGG	7 cut(s)	262, 529, 1213, 1328, 2053, 2320, 2954
BseMI	GCAATG	4 cut(s)	49, 139, 2006, 2343
BseMII	CTCAG	5 cut(s)	142, 205, 936, 2305, 2700
BseNI	ACTGG	8 cut(s)	541, 620, 650, 656, 1184, 1258, 1388, 2457
BseRI	GAGGAG	2 cut(s)	2726, 3008
BsgI	GTGCAG	3 cut(s)	858, 918, 1446
BshFI	GGCC	9 cut(s)	154, 246, 380, 540, 744, 858, 1206, 1320, 2589
BshNI	GGYRCC	1 cut(s)	1966
BsiHKAI	GWGCWC	3 cut(s)	192, 1834, 2202
BsiHKCI	CYCGRG	1 cut(s)	257
BslFI	GGGAC	1 cut(s)	1722
BslI	CCNNNNNNNGG	7 cut(s)	262, 529, 1213, 1328, 2053, 2320, 2954
BsmAI	GTCTC	4 cut(s)	407, 1266, 1272, 2107
BsmFI	GGGAC	1 cut(s)	1722
BsmI	GAATGC	1 cut(s)	2926
BsnI	GGCC	9 cut(s)	154, 246, 380, 540, 744, 858, 1206, 1320, 2589
Bso31I	GGTCTC	2 cut(s)	407, 1266
BsoBI	CYCGRG	1 cut(s)	257
Bsp119I	TTCGAA	1 cut(s)	966
Bsp1286I	GDGCHC	4 cut(s)	192, 944, 1834, 2202
Bsp1407I	TGTACA	1 cut(s)	315
Bsp1720I	GCTNAGC	3 cut(s)	128, 191, 216
Bsp19I	CCATGG	2 cut(s)	483, 1778
BspACI	CCGC	4 cut(s)	64, 297, 429, 1407
BspANI	GGCC	9 cut(s)	154, 246, 380, 540, 744, 858, 1206, 1320, 2589
BspCNI	CTCAG	5 cut(s)	141, 204, 937, 2304, 2701
BspLI	GGNNCC	4 cut(s)	245, 1968, 2757, 3058
BspMAI	CTGCAG	2 cut(s)	910, 2931
BspMI	ACCTGC	2 cut(s)	211, 1468
BspPI	GGATC	6 cut(s)	263, 714, 2345, 2505, 2790, 2817
BspQI	GCTCTTC	1 cut(s)	1287
BspT104I	TTCGAA	1 cut(s)	966
BspT107I	GGYRCC	1 cut(s)	1966
BspTNI	GGTCTC	2 cut(s)	407, 1266
BsrBI	CCGCTC	1 cut(s)	66
BsrDI	GCAATG	4 cut(s)	49, 139, 2006, 2343
BsrGI	TGTACA	1 cut(s)	315
BsrI	ACTGG	8 cut(s)	541, 620, 650, 656, 1184, 1258, 1388, 2457
BssECI	CCNNGG	8 cut(s)	417, 483, 528, 775, 859, 1778, 2118, 2826
BssNAI	GTATAC	1 cut(s)	362
BssNI	GRCGYC	2 cut(s)	48, 1967
BssSI	CACGAG	1 cut(s)	852
BssT1I	CCWWGG	4 cut(s)	483, 1778, 2118, 2826
Bst1107I	GTATAC	1 cut(s)	362
Bst2BI	CACGAG	1 cut(s)	852
Bst2UI	CCWGG	5 cut(s)	530, 776, 1399, 1703, 2315
Bst6I	CTCTTC	2 cut(s)	1287, 3074
BstACI	GRCGYC	2 cut(s)	48, 1967
BstAUI	TGTACA	1 cut(s)	315
BstBAI	YACGTR	1 cut(s)	98
BstBI	TTCGAA	1 cut(s)	966
BstC8I	GCNNGC	7 cut(s)	248, 767, 846, 1834, 1971, 2334, 2591
BstDEI	CTNAG	9 cut(s)	128, 191, 216, 722, 945, 1443, 2291, 2347, 2709
BstDSI	CCRYGG	4 cut(s)	417, 483, 859, 1778
BstEII	GGTNACC	2 cut(s)	1382, 1455
BstF5I	GGATG	9 cut(s)	24, 499, 604, 808, 994, 1855, 1954, 2905, 2959
BstH2I	RGCGCY	2 cut(s)	1556, 1970
BstHHI	GCGC	4 cut(s)	24, 1555, 1621, 1969
BstMAI	GTCTC	4 cut(s)	407, 1266, 1272, 2107
BstMWI	GCNNNNNNNGC	4 cut(s)	845, 905, 1120, 1282
BstNI	CCWGG	5 cut(s)	530, 776, 1399, 1703, 2315
BstNSI	RCATGY	2 cut(s)	588, 2208
BstPI	GGTNACC	2 cut(s)	1382, 1455
BstSCI	CCNGG	5 cut(s)	528, 774, 1397, 1701, 2313
BstSFI	CTRYAG	4 cut(s)	906, 1280, 1893, 2927
BstV2I	GAAGAC	1 cut(s)	1210
BstX2I	RGATCY	8 cut(s)	706, 2038, 2350, 2497, 2518, 2782, 2822, 2866
BstXI	CCANNNNNNTGG	2 cut(s)	490, 536
BstYI	RGATCY	8 cut(s)	706, 2038, 2350, 2497, 2518, 2782, 2822, 2866
BstZ17I	GTATAC	1 cut(s)	362
BsuRI	GGCC	9 cut(s)	154, 246, 380, 540, 744, 858, 1206, 1320, 2589
BtgI	CCRYGG	4 cut(s)	417, 483, 859, 1778
BtgZI	GCGATG	2 cut(s)	1061, 2333
BtsCI	GGATG	9 cut(s)	24, 499, 604, 808, 994, 1855, 1954, 2905, 2959
BtsIMutI	CAGTG	5 cut(s)	657, 1191, 1984, 2236, 2654
BveI	ACCTGC	2 cut(s)	211, 1468
Cac8I	GCNNGC	7 cut(s)	248, 767, 846, 1834, 1971, 2334, 2591
CfoI	GCGC	4 cut(s)	24, 1555, 1621, 1969
Cfr13I	GGNCC	7 cut(s)	244, 743, 1205, 1319, 1643, 2122, 2212
CseI	GACGC	1 cut(s)	37
Csp6I	GTAC	7 cut(s)	316, 831, 1251, 1912, 2057, 2508, 2695
CviQI	GTAC	7 cut(s)	316, 831, 1251, 1912, 2057, 2508, 2695
DdeI	CTNAG	9 cut(s)	128, 191, 216, 722, 945, 1443, 2291, 2347, 2709
DinI	GGCGCC	1 cut(s)	1968
EaeI	YGGCCR	2 cut(s)	538, 856
Eam1104I	CTCTTC	2 cut(s)	1287, 3074
EarI	CTCTTC	2 cut(s)	1287, 3074
EciI	GGCGGA	1 cut(s)	444
Ecl136II	GAGCTC	2 cut(s)	190, 1832
Eco130I	CCWWGG	4 cut(s)	483, 1778, 2118, 2826
Eco147I	AGGCCT	2 cut(s)	154, 380
Eco24I	GRGCYC	3 cut(s)	192, 944, 1834
Eco31I	GGTCTC	2 cut(s)	407, 1266
Eco32I	GATATC	3 cut(s)	681, 1426, 2605
Eco47I	GGWCC	3 cut(s)	1643, 2122, 2212
Eco53kI	GAGCTC	2 cut(s)	190, 1832
Eco57I	CTGAAG	3 cut(s)	350, 693, 1292
Eco72I	CACGTG	1 cut(s)	98
Eco88I	CYCGRG	1 cut(s)	257
Eco91I	GGTNACC	2 cut(s)	1382, 1455
EcoICRI	GAGCTC	2 cut(s)	190, 1832
EcoO109I	RGGNCCY	1 cut(s)	244
EcoO65I	GGTNACC	2 cut(s)	1382, 1455
EcoRI	GAATTC	1 cut(s)	1579
EcoRII	CCWGG	5 cut(s)	528, 774, 1397, 1701, 2313
EcoRV	GATATC	3 cut(s)	681, 1426, 2605
EcoT14I	CCWWGG	4 cut(s)	483, 1778, 2118, 2826
EcoT22I	ATGCAT	3 cut(s)	994, 2263, 2863
EcoT38I	GRGCYC	3 cut(s)	192, 944, 1834
EgeI	GGCGCC	1 cut(s)	1968
EheI	GGCGCC	1 cut(s)	1968
ErhI	CCWWGG	4 cut(s)	483, 1778, 2118, 2826
FalI	AAGNNNNNCTT	2 cut(s)	2523, 2555
FaqI	GGGAC	1 cut(s)	1722
FauNDI	CATATG	2 cut(s)	2487, 2557
FbaI	TGATCA	1 cut(s)	1768
FblI	GTMKAC	5 cut(s)	15, 361, 1333, 2414, 2682
FokI	GGATG	9 cut(s)	11, 506, 611, 815, 1001, 1842, 1961, 2912, 2966
FriOI	GRGCYC	3 cut(s)	192, 944, 1834
FspBI	CTAG	6 cut(s)	398, 402, 2012, 2270, 2375, 2799
GlaI	GCGC	4 cut(s)	23, 1554, 1620, 1968
GsuI	CTGGAG	3 cut(s)	915, 1599, 1724
HaeII	RGCGCY	2 cut(s)	1556, 1970
HaeIII	GGCC	9 cut(s)	154, 246, 380, 540, 744, 858, 1206, 1320, 2589
HgaI	GACGC	1 cut(s)	37
HhaI	GCGC	4 cut(s)	24, 1555, 1621, 1969
Hin1I	GRCGYC	2 cut(s)	48, 1967
Hin6I	GCGC	4 cut(s)	22, 1553, 1619, 1967
HinP1I	GCGC	4 cut(s)	22, 1553, 1619, 1967
HincII	GTYRAC	6 cut(s)	16, 661, 1334, 1651, 2415, 2724
HindII	GTYRAC	6 cut(s)	16, 661, 1334, 1651, 2415, 2724
HindIII	AAGCTT	4 cut(s)	182, 1274, 1445, 2565
HpaI	GTTAAC	1 cut(s)	661
HphI	GGTGA	9 cut(s)	235, 460, 1201, 1394, 1420, 1708, 1778, 2207, 2635
Hpy99I	CGWCG	1 cut(s)	20
HpyCH4IV	ACGT	3 cut(s)	97, 211, 305
HpyF10VI	GCNNNNNNNGC	4 cut(s)	845, 905, 1120, 1282
HpyF3I	CTNAG	9 cut(s)	128, 191, 216, 722, 945, 1443, 2291, 2347, 2709
HpySE526I	ACGT	3 cut(s)	97, 211, 305
Hsp92I	GRCGYC	2 cut(s)	48, 1967
HspAI	GCGC	4 cut(s)	22, 1553, 1619, 1967
KasI	GGCGCC	1 cut(s)	1966
Ksp22I	TGATCA	1 cut(s)	1768
KspAI	GTTAAC	1 cut(s)	661
LguI	GCTCTTC	1 cut(s)	1287
LmnI	GCTCC	8 cut(s)	71, 896, 1618, 1829, 1936, 2161, 2995, 3062
MaeI	CTAG	6 cut(s)	398, 402, 2012, 2270, 2375, 2799
MaeII	ACGT	3 cut(s)	97, 211, 305
MbiI	CCGCTC	1 cut(s)	66
MfeI	CAATTG	2 cut(s)	1286, 2892
MflI	RGATCY	8 cut(s)	706, 2038, 2350, 2497, 2518, 2782, 2822, 2866
MhlI	GDGCHC	4 cut(s)	192, 944, 1834, 2202
Mly113I	GGCGCC	1 cut(s)	1967
MlyI	GAGTC	3 cut(s)	662, 695, 1664
Mph1103I	ATGCAT	3 cut(s)	994, 2263, 2863
MroXI	GAANNNNTTC	1 cut(s)	2538
MseI	TTAA	7 cut(s)	546, 660, 749, 1355, 1449, 1742, 2408
MslI	CAYNNNNRTG	5 cut(s)	488, 1122, 1860, 2064, 2207
MspA1I	CMGCKG	3 cut(s)	297, 872, 1973
MspR9I	CCNGG	5 cut(s)	530, 776, 1399, 1703, 2315
MunI	CAATTG	2 cut(s)	1286, 2892
Mva1269I	GAATGC	1 cut(s)	2926
MvaI	CCWGG	5 cut(s)	530, 776, 1399, 1703, 2315
MwoI	GCNNNNNNNGC	4 cut(s)	845, 905, 1120, 1282
NarI	GGCGCC	1 cut(s)	1967
NcoI	CCATGG	2 cut(s)	483, 1778
NdeI	CATATG	2 cut(s)	2487, 2557
NlaIV	GGNNCC	4 cut(s)	245, 1968, 2757, 3058
NmuCI	GTSAC	8 cut(s)	93, 98, 197, 301, 1382, 2188, 2652, 3017
NsiI	ATGCAT	3 cut(s)	994, 2263, 2863
NspI	RCATGY	2 cut(s)	588, 2208
NspV	TTCGAA	1 cut(s)	966
PaqCI	CACCTGC	1 cut(s)	211
PceI	AGGCCT	2 cut(s)	154, 380
PciI	ACATGT	1 cut(s)	2204
PciSI	GCTCTTC	1 cut(s)	1287
PcsI	WCGNNNNNNNCGW	1 cut(s)	2071
PctI	GAATGC	1 cut(s)	2926
PdmI	GAANNNNTTC	1 cut(s)	2538
PfeI	GAWTC	9 cut(s)	112, 323, 391, 518, 1361, 1394, 2403, 2716, 2812
PflMI	CCANNNNNTGG	3 cut(s)	2053, 2320, 2954
PleI	GAGTC	3 cut(s)	662, 694, 1663
PluTI	GGCGCC	1 cut(s)	1970
PmaCI	CACGTG	1 cut(s)	98
PmlI	CACGTG	1 cut(s)	98
PpsI	GAGTC	3 cut(s)	662, 694, 1663
Ppu21I	YACGTR	1 cut(s)	98
PscI	ACATGT	1 cut(s)	2204
PsiI	TTATAA	2 cut(s)	1002, 2663
Psp124BI	GAGCTC	2 cut(s)	192, 1834
Psp6I	CCWGG	5 cut(s)	528, 774, 1397, 1701, 2313
PspCI	CACGTG	1 cut(s)	98
PspEI	GGTNACC	2 cut(s)	1382, 1455
PspGI	CCWGG	5 cut(s)	528, 774, 1397, 1701, 2313
PspN4I	GGNNCC	4 cut(s)	245, 1968, 2757, 3058
PspPI	GGNCC	7 cut(s)	244, 743, 1205, 1319, 1643, 2122, 2212
PstI	CTGCAG	2 cut(s)	910, 2931
PsuI	RGATCY	8 cut(s)	706, 2038, 2350, 2497, 2518, 2782, 2822, 2866
PvuII	CAGCTG	2 cut(s)	872, 1973
RsaI	GTAC	7 cut(s)	317, 832, 1252, 1913, 2058, 2509, 2696
RsaNI	GTAC	7 cut(s)	316, 831, 1251, 1912, 2057, 2508, 2695
RseI	CAYNNNNRTG	5 cut(s)	488, 1122, 1860, 2064, 2207
SacI	GAGCTC	2 cut(s)	192, 1834
SalI	GTCGAC	3 cut(s)	14, 1332, 2413
SapI	GCTCTTC	1 cut(s)	1287
SaqAI	TTAA	7 cut(s)	546, 660, 749, 1355, 1449, 1742, 2408
Sau96I	GGNCC	7 cut(s)	244, 743, 1205, 1319, 1643, 2122, 2212
ScaI	AGTACT	1 cut(s)	832
SchI	GAGTC	3 cut(s)	662, 695, 1664
ScrFI	CCNGG	5 cut(s)	530, 776, 1399, 1703, 2315
SduI	GDGCHC	4 cut(s)	192, 944, 1834, 2202
SfcI	CTRYAG	4 cut(s)	906, 1280, 1893, 2927
SfoI	GGCGCC	1 cut(s)	1968
SfuI	TTCGAA	1 cut(s)	966
SinI	GGWCC	3 cut(s)	1643, 2122, 2212
SmiMI	CAYNNNNRTG	5 cut(s)	488, 1122, 1860, 2064, 2207
SmlI	CTYRAG	2 cut(s)	185, 2562
SmoI	CTYRAG	2 cut(s)	185, 2562
SseBI	AGGCCT	2 cut(s)	154, 380
SsiI	CCGC	4 cut(s)	64, 297, 429, 1407
SspDI	GGCGCC	1 cut(s)	1966
SspI	AATATT	3 cut(s)	613, 810, 2690
SspMI	CTAG	6 cut(s)	398, 402, 2012, 2270, 2375, 2799
SstI	GAGCTC	2 cut(s)	192, 1834
StuI	AGGCCT	2 cut(s)	154, 380
StyD4I	CCNGG	5 cut(s)	528, 774, 1397, 1701, 2313
StyI	CCWWGG	4 cut(s)	483, 1778, 2118, 2826
TaiI	ACGT	3 cut(s)	100, 214, 308
TaqII	GACCGA	1 cut(s)	1248
TatI	WGTACW	3 cut(s)	315, 830, 2694
TfiI	GAWTC	9 cut(s)	112, 323, 391, 518, 1361, 1394, 2403, 2716, 2812
Tru1I	TTAA	7 cut(s)	546, 660, 749, 1355, 1449, 1742, 2408
Tru9I	TTAA	7 cut(s)	546, 660, 749, 1355, 1449, 1742, 2408
TscAI	CASTG	5 cut(s)	657, 1191, 1984, 2236, 2661
TseFI	GTSAC	8 cut(s)	93, 98, 197, 301, 1382, 2188, 2652, 3017
Tsp45I	GTSAC	8 cut(s)	93, 98, 197, 301, 1382, 2188, 2652, 3017
TspGWI	ACGGA	2 cut(s)	1961, 2120
TspRI	CASTG	5 cut(s)	657, 1191, 1984, 2236, 2661
Van91I	CCANNNNNTGG	3 cut(s)	2053, 2320, 2954
VpaK11BI	GGWCC	3 cut(s)	1643, 2122, 2212
XapI	RAATTY	3 cut(s)	968, 1579, 2150
XceI	RCATGY	2 cut(s)	588, 2208
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1395
XmiI	GTMKAC	5 cut(s)	15, 361, 1333, 2414, 2682
XmnI	GAANNNNTTC	1 cut(s)	2538
XspI	CTAG	6 cut(s)	398, 402, 2012, 2270, 2375, 2799
ZrmI	AGTACT	1 cut(s)	832
Zsp2I	ATGCAT	3 cut(s)	994, 2263, 2863

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.