Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0005040

Physical Location & Seq

Genomic Coordinates Reverse (-)

2298046 .. 2308576

Gene Structure 10531 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g02010.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2718 bp

ATGTGTATACTTCAGGATTTTGAGGCCTTGACTCCAAATCTACTAGCAAGAACAATAGAGACGGTGGAGGGAGGTGGACTAGTCATATTGTTGCTTCGTTCTCTAACCTCACTCACTAACCTCTACACCATGGTTATGGATGTTCATGATAGGTTTCGAACTGAATCCCATTCTAAGGCTACTGGACGTTTTAACGAGCGTTTCTTATTATCACTTGCGTCATGCAAATCATGTGCAGTAATGGATGATGAGCTGAATATTTTACCAATTTCATCTCATGTGAGGTCAATTACCCCAGTTCCAGTGAAAGAGGACTCTGAAGGGATATCAGAGTCACAAAGGGAACTGAAGGATCTAAAAGAGCAGCTGAGCGATGCCTTTCCTGTTGGCCCTTTAATAAAGAAATGTTGTACGTTGGACCAGGGAAATGCTGTTGCTACATTTCTTGATGCAATCTTGGACAAGACACTCCGAAGTACTGTTGCCTTGCTTGCTGCTCGAGGCCGTGGAAAATCGGCTGCACTTGGTTTGTCAATTTCCGGAGCTATTGCTGCAGGGTATTCAAATATATTTGTAACTGCACCCAGCCCTGAGAACTTAAGAACCTTGTTTGAATTTGTTTGCAAGGGTTTTGATCAACTGGACTATAAGGAACATATAGATTATGATGTACAGAAAAGTAGCGACCCTTCGTTGAAGAAAGCAACTGTACAGATCAATATATACAAGCAGCACAGACAAACAATTCAGTATATACGGCCACATGAGCATGAAAAGCTTTCCCAAGTTGAACTGTTGGTTGTTGATGAAGCAGCTGCTATTCCACTACCAGTAGTGAAGTCTTTGCTTGGTCCTTATCTGGTCTTCCTTTCATCTACTGTTAATGGCTATGAAGGTACTGGTCGGTCTTTGTCCCTAAAACTTCTACAGCAATTGGAAGAGCAAAGCCAAGTGTCTGCTAAAGGGCCTACATCTGGTCGTCTTTTCAAAAAGATAGAATTGAAAGAATCAATCAGATATGCTTCTGGTGATCCGATTGAATCCTGGCTTCATGGTTTACTTTGCTTGGATATCACAAATTATATCCCTAAACTTAACGGGTTACCTGCACCCAGTGAGTGTGATCTGTACTACGTTAACCGTGATACGCTTTTTTCATATCATAAAGATAGCGAGTTGTTCTTACAGCGGATGATGGCTCTATATGTTGCCTCCCACTACAAAAATTCTCCAAATGATTTGCAACTAATGGCTGATGCCCCGGCTCACCACTTGTTTGTGCTACTTGGCCCTGTTGATGAGTCAAAAAATCAGCTTCCTGATATTTTGTGTGTCATTCAGGTCTGCCTTGAGGGAAAGATCTCTCGTGAATCTGCAATGAAAAGTTTAAGCGATGGTCATCAGCCATCCGGTGACCAGATACCATGGAAATTCTGTGAGCAATTTCAGGACACGGTTTTTCCCAGTCTTTCAGGTGCTCGGATTGTACGAATTGCTACACATCCAAGTGCCATGAAGATTGGATATGGATCACAAGCAGTGGAACTATTGACAAGGTACTACGAAGGACAGTTTGCTCCTATTTCTGAACTGGACGTTGAAGATGTTGAGACTCCCCCACTCAGAGTCACAGAAGCTGCTGAGAAGGTTTCATTGCTGGAAGAAAGTATAAAACCTAGAACAGATCGTCCTCATTTGCTCGTTCATCTTCGTGAAAGGCGACCAGAGAAGCTCCATTATATTGGTGTCTCCTTTGGGCTTACCTTGGACCTTTTCAGATTTTGGTGGAAACATAAGTTTGCTCCATTCTATATTGGACATATTCCAAGTGCTGTGACCGGGGAGCATACGTGTATGGTCCTCAAATCTTTGAAGAATGATGAACTTGAAACCAGTGATTTTCGTCCATTCTACCTAGATTTCAGGAGAAGATTTTTGAGACTATTGGGTTATAGTTTTCGTACAATGGATTATAGGCTCGCTATGAGCATCTTAGATCCTAAGATCAATTACAAGGATGTAGAACCGAAATCGTCTACTGCAGATGGATTCTTACGGTCTATCACAGACTTACTTTCGCCTTATGATATGAAGCGACTGGAGGCCTACACCAGCAGTCTTGCTGACTTTCATATGATTTTGGATCTTGTTCCAACGCTTTCACATCTGTATTTCCAAGAGAAACTTCCGGTGACATTGACAGGTGCCCAGGCTTCCATATTGCTTTGCATTGGCTTACAGAATCAAGATATCTCCTATATTGAGGGGTTGATGAAACTGGAAAGGCAGCAAATATTGTCTCTGTTTATAAAAGTTATGAAAAAGTTTCACAAATATCTATACGCTATTGCATCTGAGGGCCTCGGGTCAACCTTGCCTAAACCAAAAGAAACTCTCTTGGAACCTCACAAAATCTCCGTTGACGATGATCTCAATGATGCTGCAAGAAAAGTTGAGGATGGGATGAGATCCAACTCGGAGGGGTCATTAGATCCCAAGTTGCTTCAACAGTACGCGATTGGGGACAGAGACGCAGACTTTGAGAATGCATTACAGAATAGCGGTGCAAACTTACCGGCTGGTGGTCTTGTTAGCGTGAAATCAAGTAGACACAAAATGGATAAAGGAAAACAGAGGGAGAATCACAAGAGTGGGGAAAAGCGACGTAAAAATGAGCATGGCTCCAACTCAAAGTCCAACAAAAAGAAGAAACATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000049 GO:0000154 GO:0002097 GO:0002101 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008080 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0022613 GO:0030490 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0051391 GO:0051392 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1904812 GO:1990882 GO:1990883 GO:1990884 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

DUF1726 GNAT_acetyltr_2 Helicase_RecD tRNA_bind_2

Protein Analysis

906

Amino Acids

101.72

Weight (kDa)

6.99

Isoelectric Point (pI)

47.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005040)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10490 AT1G10490 AT3G57940 AT3G57940
fragaria_vesca	FvH4_1g22910 FvH4_1g22910 FvH4_1g22910 FvH4_1g22910 FvH4_1g22910 FvH4_1g22910 FvH4_1g22910 FvH4_1g22910
malus_domestica	MD05G1028000.v1.1 MD10G1028600.v1.1
prunus_persica	Prupe.6G169200_v2.0.a1
pyrus_communis	pycom05g02010 pycom10g01860
rosa_chinensis	RchiOBHm_Chr2g0117351
rosa_laevigata	RLG00000018344
rosa_multiflora	Rmu_co7970672.1_g000001 Rmu_sc0004436.1_g000001 Rmu_sc0013504.1_g000001
rosa_roxburghii	Rroxscaffold_2G00126550
rosa_rugosa	Rorug02G0212300 Rorug02G0212400
rosa_samantha	Rh2AG267400 Rh2BG279800 Rh2DG274500 Rh2DG293800
rosa_wichuraiana	Rw2G021170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2309
Acc36I	ACCTGC	1 cut(s)	1114
AccB1I	GGYRCC	1 cut(s)	2204
AccI	GTMKAC	3 cut(s)	7, 2036, 2608
AccII	CGCG	1 cut(s)	2516
AccIII	TCCGGA	1 cut(s)	539
AciI	CCGC	2 cut(s)	1189, 2562
AclWI	GGATC	7 cut(s)	360, 1025, 1537, 1991, 2151, 2463, 2486
AcoI	YGGCCR	1 cut(s)	758
AcsI	RAATTY	3 cut(s)	614, 1225, 1430
AcuI	CTGAAG	2 cut(s)	339, 368
AdeI	CACNNNGTG	1 cut(s)	1115
AfiI	CCNNNNNNNGG	3 cut(s)	175, 974, 2582
AflII	CTTAAG	1 cut(s)	598
AflIII	ACRYGT	1 cut(s)	1850
AhlI	ACTAGT	1 cut(s)	79
AjnI	CCWGG	3 cut(s)	420, 1043, 2208
AjuI	GAANNNNNNNTTGG	2 cut(s)	2169, 2201
AleI	CACNNNNGTG	1 cut(s)	2649
AloI	GAACNNNNNNTCC	2 cut(s)	1672, 1704
AluBI	AGCT	8 cut(s)	253, 367, 545, 778, 815, 1315, 1637, 1732
AluI	AGCT	8 cut(s)	253, 367, 545, 778, 815, 1315, 1637, 1732
Alw21I	GWGCWC	1 cut(s)	1480
Alw26I	GTCTC	6 cut(s)	53, 1604, 1753, 1933, 2304, 2523
AlwI	GGATC	7 cut(s)	360, 1025, 1537, 1991, 2151, 2463, 2486
AlwNI	CAGNNNCTG	1 cut(s)	1637
Ama87I	CYCGRG	2 cut(s)	498, 2363
Aor13HI	TCCGGA	1 cut(s)	539
AoxI	GGCC	8 cut(s)	24, 388, 502, 758, 965, 1288, 2103, 2359
ApoI	RAATTY	3 cut(s)	614, 1225, 1430
ArsI	GACNNNNNNTTYG	2 cut(s)	2522, 2554
AspS9I	GGNCC	8 cut(s)	389, 418, 851, 965, 1289, 1768, 1858, 2359
AsuC2I	CCSGG	2 cut(s)	1262, 1840
AsuHPI	GGTGA	4 cut(s)	1040, 1259, 1424, 2203
AsuII	TTCGAA	1 cut(s)	157
AvaI	CYCGRG	2 cut(s)	498, 2363
AvaII	GGWCC	4 cut(s)	418, 851, 1768, 1858
BaeGI	GKGCMC	1 cut(s)	2209
BanI	GGYRCC	1 cut(s)	2204
BarI	GAAGNNNNNNTAC	2 cut(s)	673, 705
BauI	CACGAG	1 cut(s)	1365
BbsI	GAAGAC	1 cut(s)	856
Bbv12I	GWGCWC	1 cut(s)	1480
BccI	CCATC	5 cut(s)	1189, 1388, 1414, 2039, 2453
BceAI	ACGGC	2 cut(s)	489, 773
BciT130I	CCWGG	3 cut(s)	422, 1045, 2210
BclI	TGATCA	1 cut(s)	634
BcnI	CCSGG	2 cut(s)	1262, 1840
BcoDI	GTCTC	6 cut(s)	53, 1604, 1753, 1933, 2304, 2523
BcuI	ACTAGT	1 cut(s)	79
BfaI	CTAG	4 cut(s)	44, 80, 1677, 1916
BfmI	CTRYAG	3 cut(s)	552, 926, 2040
BfrI	CTTAAG	1 cut(s)	598
BfuAI	ACCTGC	1 cut(s)	1114
BglII	AGATCT	1 cut(s)	1359
BlpI	GCTNAGC	1 cut(s)	368
BmcAI	AGTACT	1 cut(s)	478
Bme1390I	CCNGG	5 cut(s)	422, 1045, 1262, 1840, 2210
Bme18I	GGWCC	4 cut(s)	418, 851, 1768, 1858
BmeT110I	CYCGRG	2 cut(s)	498, 2363
BmgT120I	GGNCC	8 cut(s)	389, 418, 851, 965, 1289, 1768, 1858, 2359
BmiI	GGNNCC	3 cut(s)	2206, 2403, 2683
BmrFI	CCNGG	5 cut(s)	422, 1045, 1262, 1840, 2210
BmrI	ACTGGG	3 cut(s)	290, 1107, 1458
BmsI	GCATC	6 cut(s)	364, 439, 1246, 1998, 2360, 2428
BmuI	ACTGGG	3 cut(s)	290, 1107, 1458
BpiI	GAAGAC	1 cut(s)	856
BplI	GAGNNNNNCTC	2 cut(s)	2666, 2698
BpmI	CTGGAG	1 cut(s)	2120
Bpu1102I	GCTNAGC	1 cut(s)	368
Bpu14I	TTCGAA	1 cut(s)	157
BpuEI	CTTGAG	1 cut(s)	1370
BpuMI	CCSGG	2 cut(s)	1262, 1840
BsaAI	YACGTR	1 cut(s)	1851
BsaBI	GATNNNNATC	2 cut(s)	1398, 1528
BsaJI	CCNNGG	9 cut(s)	129, 421, 505, 1260, 1424, 1764, 1839, 2208, 2362
BsaWI	WCCGGW	3 cut(s)	539, 1409, 2188
BsaXI	ACNNNNNCTCC	4 cut(s)	1835, 1865, 2399, 2429
Bsc4I	CCNNNNNNNGG	3 cut(s)	175, 974, 2582
Bse118I	RCCGGY	1 cut(s)	2575
Bse3DI	GCAATG	2 cut(s)	1383, 1652
Bse8I	GATNNNNATC	2 cut(s)	1398, 1528
BseAI	TCCGGA	1 cut(s)	539
BseBI	CCWGG	3 cut(s)	422, 1045, 2210
BseDI	CCNNGG	9 cut(s)	129, 421, 505, 1260, 1424, 1764, 1839, 2208, 2362
BseGI	GGATG	8 cut(s)	145, 250, 1197, 1406, 1501, 2023, 2464, 2469
BseJI	GATNNNNATC	2 cut(s)	1398, 1528
BseLI	CCNNNNNNNGG	3 cut(s)	175, 974, 2582
BseMI	GCAATG	2 cut(s)	1383, 1652
BseMII	CTCAG	5 cut(s)	359, 582, 1632, 1636, 2346
BseSI	GKGCMC	1 cut(s)	2209
BseYI	CCCAGC	1 cut(s)	584
BsgI	GTGCAG	4 cut(s)	255, 504, 564, 1092
Bsh1236I	CGCG	1 cut(s)	2516
BshFI	GGCC	8 cut(s)	26, 390, 504, 760, 967, 1290, 2105, 2361
BshNI	GGYRCC	1 cut(s)	2204
BsiHKAI	GWGCWC	1 cut(s)	1480
BsiHKCI	CYCGRG	2 cut(s)	498, 2363
BsiSI	CCGG	6 cut(s)	540, 1262, 1410, 1839, 2189, 2576
BslFI	GGGAC	2 cut(s)	898, 2537
BslI	CCNNNNNNNGG	3 cut(s)	175, 974, 2582
BsmAI	GTCTC	6 cut(s)	53, 1604, 1753, 1933, 2304, 2523
BsmBI	CGTCTC	2 cut(s)	53, 2523
BsmFI	GGGAC	2 cut(s)	898, 2537
BsmI	GAATGC	1 cut(s)	2551
BsnI	GGCC	8 cut(s)	26, 390, 504, 760, 967, 1290, 2105, 2361
BsoBI	CYCGRG	2 cut(s)	498, 2363
Bsp119I	TTCGAA	1 cut(s)	157
Bsp1286I	GDGCHC	2 cut(s)	1480, 2209
Bsp13I	TCCGGA	1 cut(s)	539
Bsp1407I	TGTACA	2 cut(s)	670, 709
Bsp1720I	GCTNAGC	1 cut(s)	368
Bsp19I	CCATGG	2 cut(s)	129, 1424
BspACI	CCGC	2 cut(s)	1189, 2562
BspANI	GGCC	8 cut(s)	26, 390, 504, 760, 967, 1290, 2105, 2361
BspCNI	CTCAG	5 cut(s)	360, 583, 1633, 1635, 2347
BspEI	TCCGGA	1 cut(s)	539
BspFNI	CGCG	1 cut(s)	2516
BspHI	TCATGA	1 cut(s)	145
BspLI	GGNNCC	3 cut(s)	2206, 2403, 2683
BspMAI	CTGCAG	2 cut(s)	556, 2044
BspMI	ACCTGC	1 cut(s)	1114
BspPI	GGATC	7 cut(s)	360, 1025, 1537, 1991, 2151, 2463, 2486
BspQI	GCTCTTC	1 cut(s)	933
BspT104I	TTCGAA	1 cut(s)	157
BspT107I	GGYRCC	1 cut(s)	2204
BspTI	CTTAAG	1 cut(s)	598
BsrDI	GCAATG	2 cut(s)	1383, 1652
BsrFI	RCCGGY	1 cut(s)	2575
BsrGI	TGTACA	2 cut(s)	670, 709
BssAI	RCCGGY	1 cut(s)	2575
BssECI	CCNNGG	9 cut(s)	129, 421, 505, 1260, 1424, 1764, 1839, 2208, 2362
BssNAI	GTATAC	1 cut(s)	8
BssSI	CACGAG	1 cut(s)	1365
BssT1I	CCWWGG	3 cut(s)	129, 1424, 1764
Bst1107I	GTATAC	1 cut(s)	8
Bst2BI	CACGAG	1 cut(s)	1365
Bst2UI	CCWGG	3 cut(s)	422, 1045, 2210
Bst6I	CTCTTC	1 cut(s)	933
BstAFI	CTTAAG	1 cut(s)	598
BstAUI	TGTACA	2 cut(s)	670, 709
BstBAI	YACGTR	1 cut(s)	1851
BstBI	TTCGAA	1 cut(s)	157
BstC8I	GCNNGC	2 cut(s)	492, 1980
BstDEI	CTNAG	8 cut(s)	174, 368, 591, 1622, 1641, 1993, 2001, 2355
BstDSI	CCRYGG	3 cut(s)	129, 505, 1424
BstEII	GGTNACC	2 cut(s)	1101, 1412
BstF5I	GGATG	8 cut(s)	145, 250, 1197, 1406, 1501, 2023, 2464, 2469
BstFNI	CGCG	1 cut(s)	2516
BstMAI	GTCTC	6 cut(s)	53, 1604, 1753, 1933, 2304, 2523
BstMWI	GCNNNNNNNGC	4 cut(s)	491, 551, 766, 775
BstNI	CCWGG	3 cut(s)	422, 1045, 2210
BstPI	GGTNACC	2 cut(s)	1101, 1412
BstSCI	CCNGG	5 cut(s)	420, 1043, 1260, 1838, 2208
BstSFI	CTRYAG	3 cut(s)	552, 926, 2040
BstSLI	GKGCMC	1 cut(s)	2209
BstUI	CGCG	1 cut(s)	2516
BstV2I	GAAGAC	1 cut(s)	856
BstX2I	RGATCY	6 cut(s)	352, 1359, 1996, 2143, 2468, 2491
BstXI	CCANNNNNNTGG	2 cut(s)	136, 1742
BstYI	RGATCY	6 cut(s)	352, 1359, 1996, 2143, 2468, 2491
BstZ17I	GTATAC	1 cut(s)	8
BsuRI	GGCC	8 cut(s)	26, 390, 504, 760, 967, 1290, 2105, 2361
BtgI	CCRYGG	3 cut(s)	129, 505, 1424
BtgZI	GCGATG	2 cut(s)	387, 1407
BtsCI	GGATG	8 cut(s)	145, 250, 1197, 1406, 1501, 2023, 2464, 2469
BtsI	GCAGTG	1 cut(s)	1545
BtsIMutI	CAGTG	4 cut(s)	309, 1120, 1545, 1900
BveI	ACCTGC	1 cut(s)	1114
Cac8I	GCNNGC	2 cut(s)	492, 1980
CaiI	CAGNNNCTG	1 cut(s)	1637
CciI	TCATGA	1 cut(s)	145
Cfr10I	RCCGGY	1 cut(s)	2575
Cfr13I	GGNCC	8 cut(s)	389, 418, 851, 965, 1289, 1768, 1858, 2359
CseI	GACGC	2 cut(s)	207, 2540
DdeI	CTNAG	8 cut(s)	174, 368, 591, 1622, 1641, 1993, 2001, 2355
DraIII	CACNNNGTG	1 cut(s)	1115
EaeI	YGGCCR	1 cut(s)	758
Eam1104I	CTCTTC	1 cut(s)	933
EarI	CTCTTC	1 cut(s)	933
Eco130I	CCWWGG	3 cut(s)	129, 1424, 1764
Eco147I	AGGCCT	2 cut(s)	26, 2105
Eco32I	GATATC	3 cut(s)	327, 1072, 2251
Eco47I	GGWCC	4 cut(s)	418, 851, 1768, 1858
Eco57I	CTGAAG	2 cut(s)	339, 368
Eco88I	CYCGRG	2 cut(s)	498, 2363
Eco91I	GGTNACC	2 cut(s)	1101, 1412
EcoO109I	RGGNCCY	2 cut(s)	965, 2359
EcoO65I	GGTNACC	2 cut(s)	1101, 1412
EcoRII	CCWGG	3 cut(s)	420, 1043, 2208
EcoRV	GATATC	3 cut(s)	327, 1072, 2251
EcoT14I	CCWWGG	3 cut(s)	129, 1424, 1764
EcoT22I	ATGCAT	1 cut(s)	2551
ErhI	CCWWGG	3 cut(s)	129, 1424, 1764
Esp3I	CGTCTC	2 cut(s)	53, 2523
FalI	AAGNNNNNCTT	2 cut(s)	2169, 2201
FaqI	GGGAC	2 cut(s)	898, 2537
FauNDI	CATATG	1 cut(s)	2133
FbaI	TGATCA	1 cut(s)	634
FblI	GTMKAC	3 cut(s)	7, 2036, 2608
FokI	GGATG	8 cut(s)	152, 257, 1204, 1393, 1488, 2030, 2471, 2476
FspBI	CTAG	4 cut(s)	44, 80, 1677, 1916
GsaI	CCCAGC	1 cut(s)	588
GsuI	CTGGAG	1 cut(s)	2120
HaeIII	GGCC	8 cut(s)	26, 390, 504, 760, 967, 1290, 2105, 2361
HapII	CCGG	6 cut(s)	540, 1262, 1410, 1839, 2189, 2576
HgaI	GACGC	2 cut(s)	207, 2540
HincII	GTYRAC	3 cut(s)	1138, 2370, 2422
HindII	GTYRAC	3 cut(s)	1138, 2370, 2422
HindIII	AAGCTT	1 cut(s)	776
HpaI	GTTAAC	1 cut(s)	1138
HpaII	CCGG	6 cut(s)	540, 1262, 1410, 1839, 2189, 2576
HphI	GGTGA	4 cut(s)	1040, 1259, 1424, 2203
Hpy166II	GTNNAC	8 cut(s)	8, 77, 1058, 1138, 2037, 2370, 2422, 2609
Hpy8I	GTNNAC	8 cut(s)	8, 77, 1058, 1138, 2037, 2370, 2422, 2609
Hpy99I	CGWCG	1 cut(s)	2667
HpyAV	CCTTC	6 cut(s)	314, 343, 699, 887, 1559, 1639
HpyCH4IV	ACGT	6 cut(s)	187, 413, 1134, 1596, 1850, 2665
HpyF10VI	GCNNNNNNNGC	4 cut(s)	491, 551, 766, 775
HpyF3I	CTNAG	8 cut(s)	174, 368, 591, 1622, 1641, 1993, 2001, 2355
HpySE526I	ACGT	6 cut(s)	187, 413, 1134, 1596, 1850, 2665
Kpn2I	TCCGGA	1 cut(s)	539
Ksp22I	TGATCA	1 cut(s)	634
KspAI	GTTAAC	1 cut(s)	1138
LguI	GCTCTTC	1 cut(s)	933
LmnI	GCTCC	6 cut(s)	542, 1582, 1737, 1807, 1843, 2687
LweI	GCATC	6 cut(s)	364, 439, 1246, 1998, 2360, 2428
MaeI	CTAG	4 cut(s)	44, 80, 1677, 1916
MaeII	ACGT	6 cut(s)	187, 413, 1134, 1596, 1850, 2665
MaeIII	GTNAC	7 cut(s)	333, 574, 1101, 1412, 1627, 1834, 2191
MboII	GAAGA	9 cut(s)	709, 856, 950, 1528, 1613, 1673, 1700, 1885, 1941
MfeI	CAATTG	1 cut(s)	932
MflI	RGATCY	6 cut(s)	352, 1359, 1996, 2143, 2468, 2491
MhlI	GDGCHC	2 cut(s)	1480, 2209
MlyI	GAGTC	6 cut(s)	25, 308, 341, 1310, 1606, 1635
MmeI	TCCRAC	4 cut(s)	396, 2177, 2496, 2709
Mph1103I	ATGCAT	1 cut(s)	2551
MroI	TCCGGA	1 cut(s)	539
MseI	TTAA	7 cut(s)	192, 395, 599, 882, 1095, 1137, 1388
MslI	CAYNNNNRTG	5 cut(s)	134, 768, 1506, 1710, 2649
MspA1I	CMGCKG	3 cut(s)	367, 815, 1189
MspCI	CTTAAG	1 cut(s)	598
MspI	CCGG	6 cut(s)	540, 1262, 1410, 1839, 2189, 2576
MspR9I	CCNGG	5 cut(s)	422, 1045, 1262, 1840, 2210
MunI	CAATTG	1 cut(s)	932
Mva1269I	GAATGC	1 cut(s)	2551
MvaI	CCWGG	3 cut(s)	422, 1045, 2210
MvnI	CGCG	1 cut(s)	2516
MwoI	GCNNNNNNNGC	4 cut(s)	491, 551, 766, 775
NciI	CCSGG	2 cut(s)	1262, 1840
NcoI	CCATGG	2 cut(s)	129, 1424
NdeI	CATATG	1 cut(s)	2133
NlaIV	GGNNCC	3 cut(s)	2206, 2403, 2683
NmuCI	GTSAC	5 cut(s)	333, 1412, 1627, 1834, 2191
NsiI	ATGCAT	1 cut(s)	2551
NspV	TTCGAA	1 cut(s)	157
OliI	CACNNNNGTG	1 cut(s)	2649
PaeR7I	CTCGAG	1 cut(s)	498
PagI	TCATGA	1 cut(s)	145
PceI	AGGCCT	2 cut(s)	26, 2105
PciSI	GCTCTTC	1 cut(s)	933
PcsI	WCGNNNNNNNCGW	2 cut(s)	1486, 1717
PctI	GAATGC	1 cut(s)	2551
PfeI	GAWTC	7 cut(s)	164, 1007, 1040, 1370, 2049, 2242, 2641
PleI	GAGTC	6 cut(s)	25, 308, 340, 1309, 1606, 1634
PpsI	GAGTC	6 cut(s)	25, 308, 340, 1309, 1606, 1634
Ppu21I	YACGTR	1 cut(s)	1851
PsiI	TTATAA	1 cut(s)	2309
Psp6I	CCWGG	3 cut(s)	420, 1043, 2208
PspEI	GGTNACC	2 cut(s)	1101, 1412
PspFI	CCCAGC	1 cut(s)	584
PspGI	CCWGG	3 cut(s)	420, 1043, 2208
PspN4I	GGNNCC	3 cut(s)	2206, 2403, 2683
PspPI	GGNCC	8 cut(s)	389, 418, 851, 965, 1289, 1768, 1858, 2359
PspXI	VCTCGAGB	1 cut(s)	498
PstI	CTGCAG	2 cut(s)	556, 2044
PstNI	CAGNNNCTG	1 cut(s)	1637
PsuI	RGATCY	6 cut(s)	352, 1359, 1996, 2143, 2468, 2491
PvuII	CAGCTG	2 cut(s)	367, 815
RseI	CAYNNNNRTG	5 cut(s)	134, 768, 1506, 1710, 2649
SapI	GCTCTTC	1 cut(s)	933
SaqAI	TTAA	7 cut(s)	192, 395, 599, 882, 1095, 1137, 1388
Sau96I	GGNCC	8 cut(s)	389, 418, 851, 965, 1289, 1768, 1858, 2359
ScaI	AGTACT	1 cut(s)	478
SchI	GAGTC	6 cut(s)	25, 308, 341, 1310, 1606, 1635
ScrFI	CCNGG	5 cut(s)	422, 1045, 1262, 1840, 2210
SduI	GDGCHC	2 cut(s)	1480, 2209
SfaNI	GCATC	6 cut(s)	364, 439, 1246, 1998, 2360, 2428
SfcI	CTRYAG	3 cut(s)	552, 926, 2040
Sfr274I	CTCGAG	1 cut(s)	498
SfuI	TTCGAA	1 cut(s)	157
SinI	GGWCC	4 cut(s)	418, 851, 1768, 1858
SlaI	CTCGAG	1 cut(s)	498
SmiMI	CAYNNNNRTG	5 cut(s)	134, 768, 1506, 1710, 2649
SmlI	CTYRAG	3 cut(s)	498, 598, 1349
SmoI	CTYRAG	3 cut(s)	498, 598, 1349
SpeI	ACTAGT	1 cut(s)	79
SseBI	AGGCCT	2 cut(s)	26, 2105
SsiI	CCGC	2 cut(s)	1189, 2562
SspI	AATATT	2 cut(s)	259, 2295
SspMI	CTAG	4 cut(s)	44, 80, 1677, 1916
StuI	AGGCCT	2 cut(s)	26, 2105
StyD4I	CCNGG	5 cut(s)	420, 1043, 1260, 1838, 2208
StyI	CCWWGG	3 cut(s)	129, 1424, 1764
TaiI	ACGT	6 cut(s)	190, 416, 1137, 1599, 1853, 2668
TaqI	TCGA	2 cut(s)	157, 499
TaqII	GACCGA	1 cut(s)	894
TatI	WGTACW	4 cut(s)	476, 670, 709, 1128
TfiI	GAWTC	7 cut(s)	164, 1007, 1040, 1370, 2049, 2242, 2641
Tru1I	TTAA	7 cut(s)	192, 395, 599, 882, 1095, 1137, 1388
Tru9I	TTAA	7 cut(s)	192, 395, 599, 882, 1095, 1137, 1388
TscAI	CASTG	4 cut(s)	309, 1120, 1545, 1900
TseFI	GTSAC	5 cut(s)	333, 1412, 1627, 1834, 2191
Tsp45I	GTSAC	5 cut(s)	333, 1412, 1627, 1834, 2191
TspGWI	ACGGA	1 cut(s)	2407
TspRI	CASTG	4 cut(s)	309, 1120, 1545, 1900
Vha464I	CTTAAG	1 cut(s)	598
VpaK11BI	GGWCC	4 cut(s)	418, 851, 1768, 1858
XapI	RAATTY	3 cut(s)	614, 1225, 1430
XhoI	CTCGAG	1 cut(s)	498
XmiI	GTMKAC	3 cut(s)	7, 2036, 2608
XspI	CTAG	4 cut(s)	44, 80, 1677, 1916
ZrmI	AGTACT	1 cut(s)	478
Zsp2I	ATGCAT	1 cut(s)	2551

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.