Rorug02G0212300

RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
20124024 .. 20129344
5321 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0212300.1

Sequence Viewer

Length: 1071 bp
ATGATTGAATCATTATATTGGGATCGCTTCTACCAACGATCTGGATCGCGACCGTATTGTGTTCTGGGTCGTGCAATTCGGGTCTCGGTACGGAGGCCAAGCCAGCGAACCCGGTCCATAAGTCTGTCGTACTCCAGGAATTTGTATATTTGTGGGTTTCTTTGTAGACTTCACAATAACAAAACGATTTTTATGACAGAGAACATGCAAGACCCGGCTCAACATAGCCGTATACAAGGTGATGCTGCAAATCTAAGTGGTGGTAAGGATCAAAATTCCTTATCATTGGAACGTGTCACTGAACAACATTTACTACCGAACGAACAGAAGAAGACACTACTTGAAAAACTTCAAGGTACAAGCTGGGATACCATACATGTAATCTCATGTGTGATTGCAGTCTCAGTTGATCCTTTGTTCTTTTACCTTCCGATCGTTGATGAGAAAATCAAGTGCCTTGGAGTGGACAAAAATTTGAGGATTGCTGCTCTTCTTTTGCGCGCGTTCACTGATATTGCTTTCATCCTGAACATTTTCTATCAAATTAAAAATGTCACCGAAAATGTACAGTCTAGAGCAAAGTCGATTAATAATAATCTTAAGAATAACGAAAAAGGAAAGCAGGTTTCACAATCCAAACGAGATTCAAGAGTTTGGTTCGCTAAGGAATTAGCTCGAAAGATGCCATGGCACTCAATTACGATTGACATTCTTGCGGTTCTCCCGATCCCACAAGTGCTAATGGCTGTTTTCTTCAAAATGAGAAGCTCCAAATATCTGGGCCGAAGAAAGATTATTGATGTCTTTCTTCTTGCCCAATATTTGCCAAGGATTTATCGTATGCATCACTCGTCAATGAAACTTAAGCAAAAGAAGGGACCATGGATCAGGGGTGCATTATATTTTTTCTTGTACATCCTCGCCAGTCATGCCCTAGCTGCCATTGGCGAAGGGGCTAACAATTTCACTGCTCTTCCAGCAATTAAGCAAGCAAGGAAGCAATCAGAAGTTTCTCCTCCTTACTATCAGATACCGACCAAAGCAAGGTACAAGCAATTCACAGCAAAATAA

Protein Analysis

356

Amino Acids

41.06

Weight (kDa)

10.14

Isoelectric Point (pI)

49.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01050
fragaria_vesca FvH4_1g24181 FvH4_1g28741 FvH4_1g29781 FvH4_2g00621 FvH4_2g04885 FvH4_2g11953 FvH4_2g11954 FvH4_2g12001 FvH4_2g12002 FvH4_2g12222 FvH4_2g12223 FvH4_2g38351 FvH4_3g04401 FvH4_3g31330 FvH4_3g33091 FvH4_4g11461 FvH4_5g27993 FvH4_5g27994 FvH4_5g28072 FvH4_5g28231 FvH4_5g28591 FvH4_5g34261 FvH4_6g18162 FvH4_6g25500 FvH4_6g25561 FvH4_6g25792 FvH4_6g27602 FvH4_6g46881
malus_domestica MD03G1019700.v1.1
prunus_persica Prupe.1G055400_v2.0.a1 Prupe.1G179200_v2.0.a1 Prupe.1G208200_v2.0.a1 Prupe.1G231200_v2.0.a1 Prupe.2G044900_v2.0.a1 Prupe.2G055100_v2.0.a1 Prupe.2G097600_v2.0.a1 Prupe.2G114200_v2.0.a1 Prupe.3G109000_v2.0.a1 Prupe.3G109300_v2.0.a1 Prupe.3G109600_v2.0.a1 Prupe.4G246900_v2.0.a1 Prupe.5G026400_v2.0.a1
pyrus_communis pycom05g17130 pycom07g06820 pycom07g18590 pycom07g22730 pycom12401g00120 pycom12401g00180 pycom420g00470
rosa_chinensis RchiOBHm_Chr1g0342591 RchiOBHm_Chr1g0342601 RchiOBHm_Chr1g0342611 RchiOBHm_Chr1g0351011 RchiOBHm_Chr2g0146151 RchiOBHm_Chr2g0171821 RchiOBHm_Chr3g0492921 RchiOBHm_Chr3g0492931 RchiOBHm_Chr4g0406871 RchiOBHm_Chr4g0426311 RchiOBHm_Chr5g0020721 RchiOBHm_Chr5g0050111 RchiOBHm_Chr5g0051681 RchiOBHm_Chr5g0053531 RchiOBHm_Chr5g0054841 RchiOBHm_Chr5g0055061 RchiOBHm_Chr5g0055071 RchiOBHm_Chr6g0248911 RchiOBHm_Chr6g0291741 RchiOBHm_Chr7g0187781 RchiOBHm_Chr7g0220081 RchiOBHm_Chr7g0224391 RchiOBHm_Chr7g0235221
rosa_laevigata RLG00000002133 RLG00000002402 RLG00000002736 RLG00000011046 RLG00000013214 RLG00000016550 RLG00000021669 RLG00000022948 RLG00000023691 RLG00000024682 RLG00000027826 RLG00000029734 RLG00000029831 RLG00000030305 RLG00000037042
rosa_multiflora Rmu_co7992532.1_g000001 Rmu_co8021462.1_g000001 Rmu_co8229237.1_g000001 Rmu_co8281571.1_g000001 Rmu_co8326451.1_g000001 Rmu_co8359553.1_g000001 Rmu_co8372117.1_g000001 Rmu_co8427177.1_g000001 Rmu_co8474063.1_g000002 Rmu_sc0000007.1_g000020 Rmu_sc0000173.1_g000002 Rmu_sc0000367.1_g000086 Rmu_sc0000367.1_g000088 Rmu_sc0000559.1_g000002 Rmu_sc0000733.1_g000014 Rmu_sc0000745.1_g000006 Rmu_sc0000791.1_g000046 Rmu_sc0000791.1_g000049 Rmu_sc0000824.1_g000010 Rmu_sc0000824.1_g000011 Rmu_sc0000834.1_g000009 Rmu_sc0000834.1_g000011 Rmu_sc0000911.1_g000020 Rmu_sc0000935.1_g000034 Rmu_sc0000935.1_g000051 Rmu_sc0000935.1_g000053 Rmu_sc0001000.1_g000005 Rmu_sc0001000.1_g000006 Rmu_sc0001150.1_g000004 Rmu_sc0001227.1_g000002 Rmu_sc0001322.1_g000018 Rmu_sc0001343.1_g000001 Rmu_sc0001356.1_g000004 Rmu_sc0001356.1_g000005 Rmu_sc0001363.1_g000007 Rmu_sc0001463.1_g000012 Rmu_sc0001484.1_g000023 Rmu_sc0001516.1_g000003 Rmu_sc0001516.1_g000005 Rmu_sc0001619.1_g000005 Rmu_sc0001648.1_g000032 Rmu_sc0001648.1_g000035 Rmu_sc0001694.1_g000008 Rmu_sc0001809.1_g000023 Rmu_sc0002093.1_g000027 Rmu_sc0002231.1_g000004 Rmu_sc0002245.1_g000001 Rmu_sc0002245.1_g000003 Rmu_sc0002354.1_g000045 Rmu_sc0002354.1_g000048 Rmu_sc0002368.1_g000014 Rmu_sc0002368.1_g000016 Rmu_sc0002368.1_g000017 Rmu_sc0002401.1_g000030 Rmu_sc0002487.1_g000012 Rmu_sc0002798.1_g000028 Rmu_sc0002923.1_g000012 Rmu_sc0002960.1_g000002 Rmu_sc0003033.1_g000072 Rmu_sc0003133.1_g000015 Rmu_sc0003168.1_g000007 Rmu_sc0003945.1_g000002 Rmu_sc0003945.1_g000004 Rmu_sc0003945.1_g000005 Rmu_sc0003979.1_g000004 Rmu_sc0004005.1_g000007 Rmu_sc0004059.1_g000018 Rmu_sc0004064.1_g000001 Rmu_sc0004083.1_g000007 Rmu_sc0004083.1_g000008 Rmu_sc0004354.1_g000033 Rmu_sc0004368.1_g000035 Rmu_sc0004483.1_g000032 Rmu_sc0004646.1_g000012 Rmu_sc0005014.1_g000006 Rmu_sc0005016.1_g000046 Rmu_sc0005016.1_g000051 Rmu_sc0005033.1_g000005 Rmu_sc0005033.1_g000007 Rmu_sc0005065.1_g000002 Rmu_sc0005065.1_g000004 Rmu_sc0005168.1_g000012 Rmu_sc0005238.1_g000001 Rmu_sc0005365.1_g000012 Rmu_sc0005631.1_g000005 Rmu_sc0005704.1_g000013 Rmu_sc0005704.1_g000014 Rmu_sc0005781.1_g000030 Rmu_sc0005789.1_g000016 Rmu_sc0006185.1_g000001 Rmu_sc0006185.1_g000002 Rmu_sc0006266.1_g000044 Rmu_sc0006561.1_g000018 Rmu_sc0006695.1_g000016 Rmu_sc0007739.1_g000022 Rmu_sc0008050.1_g000013 Rmu_sc0008169.1_g000006 Rmu_sc0008855.1_g000006 Rmu_sc0009298.1_g000002 Rmu_sc0009495.1_g000005 Rmu_sc0010608.1_g000003 Rmu_sc0010958.1_g000005 Rmu_sc0011506.1_g000001 Rmu_sc0011790.1_g000002 Rmu_sc0011790.1_g000003 Rmu_sc0012042.1_g000004 Rmu_sc0012042.1_g000005 Rmu_sc0012140.1_g000020 Rmu_sc0012726.1_g000005 Rmu_sc0012746.1_g000023 Rmu_sc0013193.1_g000002 Rmu_sc0013193.1_g000003 Rmu_sc0017997.1_g000001 Rmu_sc0021401.1_g000001 Rmu_sc0025959.1_g000001 Rmu_sc0026403.1_g000003 Rmu_sc0028616.1_g000002 Rmu_sc0029801.1_g000002 Rmu_sc0032453.1_g000001 Rmu_sc0033672.1_g000002 Rmu_sc0034553.1_g000001 Rmu_sc0036883.1_g000001 Rmu_ssc0000096.1_g000001 Rmu_ssc0000158.1_g000031 Rmu_ssc0000291.1_g000034 Rmu_ssc0000381.1_g000026 Rmu_ssc0000387.1_g000010 Rmu_ssc0000474.1_g000002 Rmu_ssc0000474.1_g000004
rosa_roxburghii Rroxscaffold_1G00020090 Rroxscaffold_1G00020100 Rroxscaffold_1G00022940 Rroxscaffold_1G00044600 Rroxscaffold_1G00054420 Rroxscaffold_1G00054430 Rroxscaffold_1G00056440 Rroxscaffold_2G00090180 Rroxscaffold_2G00101250 Rroxscaffold_2G00110600 Rroxscaffold_2G00152800 Rroxscaffold_4G00320370 Rroxscaffold_4G00320640 Rroxscaffold_4G00322420 Rroxscaffold_4G00324670 Rroxscaffold_5G00332760 Rroxscaffold_5G00345010 Rroxscaffold_5G00345020 Rroxscaffold_5G00355470 Rroxscaffold_5G00385520 Rroxscaffold_6G00394610 Rroxscaffold_6G00394700 Rroxscaffold_7G00164190 Rroxscaffold_7G00182750 Rroxscaffold_7G00183540 Rroxscaffold_7G00203520 Rroxscaffold_7G00211630
rosa_rugosa Rorug01G0041400 Rorug01G0041500 Rorug01G0065300 Rorug01G0065300 Rorug01G0069700 Rorug01G0069800 Rorug01G0070300 Rorug01G0072300 Rorug01G0072900 Rorug01G0093100 Rorug01G0147100.1 Rorug01G0196900 Rorug01G0259700 Rorug02G0162000 Rorug02G0182700 Rorug02G0212300 Rorug02G0214700 Rorug02G0229900 Rorug02G0246100 Rorug02G0257400 Rorug02G0259100 Rorug02G0341400 Rorug02G0341500 Rorug02G0341700 Rorug02G0341800 Rorug02G0355600 Rorug02G0386100 Rorug02G0386100 Rorug02G0387000 Rorug02G0387100 Rorug02G0388400 Rorug02G0388500 Rorug02G0429100 Rorug02G0429100 Rorug02G0455300 Rorug02G0634400 Rorug03G0163200 Rorug03G0198500 Rorug03G0199600 Rorug03G0204000 Rorug03G0265600 Rorug03G0266100 Rorug03G0266200 Rorug03G0280600 Rorug03G0348200 Rorug03G0349700 Rorug03G0349800 Rorug04G0020200 Rorug04G0073700 Rorug04G0215000 Rorug04G0426100 Rorug05G0064200 Rorug05G0064300 Rorug05G0265700 Rorug05G0287400 Rorug05G0287500 Rorug05G0287500 Rorug05G0405000 Rorug05G0525700 Rorug05G0525800 Rorug05G0588200 Rorug06G0038200 Rorug06G0057900 Rorug06G0058000 Rorug06G0058500 Rorug06G0058600 Rorug06G0116700 Rorug06G0159300.1 Rorug06G0159400 Rorug06G0174700 Rorug06G0375500 Rorug07G0091400 Rorug07G0094900 Rorug07G0108100 Rorug07G0140700 Rorug07G0140700 Rorug07G0207100 Rorug07G0207100 Rorug07G0207200 Rorug07G0287300
rosa_samantha Rh1AG100100 Rh1AG104500 Rh1BG150700 Rh1BG237700 Rh1BG334000 Rh1CG090000 Rh1CG100100 Rh1CG347300 Rh1DG090500 Rh1DG096100 Rh1DG107400 Rh1DG182500 Rh1DG265700 Rh1DG365200 Rh2BG256800 Rh2BG361300 Rh2BG468600 Rh2BG549800 Rh2CG270900 Rh2DG276700 Rh2DG276800 Rh2DG377700 Rh2DG477900 Rh3AG161200 Rh3BG138800 Rh3BG185700 Rh3BG269600 Rh3CG176000 Rh4AG006100 Rh4AG216700 Rh4AG355800 Rh4CG108600 Rh5AG141700 Rh5AG480000 Rh5BG014500 Rh5BG134600 Rh5BG295400 Rh5BG552900 Rh5CG058600 Rh5CG286400 Rh5CG350900 Rh5CG575800 Rh5DG004300 Rh5DG254600 Rh5DG356500 Rh6AG106500 Rh6AG191100 Rh6AG224700 Rh6BG074700 Rh6BG181400 Rh6BG352200 Rh6BG408400 Rh6BG453600 Rh6CG047400 Rh6CG172200 Rh6CG189400 Rh6CG515800 Rh6DG042900 Rh6DG163400 Rh7AG089300 Rh7AG227400 Rh7AG275600 Rh7AG375100 Rh7AG460900 Rh7AG485200 Rh7BG146100 Rh7BG354300 Rh7CG077100 Rh7CG294500 Rh7CG393800 Rh7DG041700 Rh7DG062700 Rh7DG091700 Rh7DG178900 Rh7DG192300 Rh7DG297000 Rh7DG403600 Rh7DG411800
rosa_wichuraiana Rw0G007100 Rw0G011430 Rw1G003580 Rw1G004040 Rw1G005880 Rw1G009860 Rw1G009990 Rw1G012190 Rw1G012200 Rw1G013740 Rw1G013750 Rw1G016710 Rw1G021050 Rw2G023790 Rw2G028810 Rw2G035890 Rw2G036250 Rw4G008880 Rw4G014380 Rw4G014390 Rw4G016020 Rw4G037160 Rw5G010060 Rw5G030620 Rw5G033840 Rw5G049840 Rw5G049850 Rw6G003450 Rw6G015080 Rw7G019640 Rw7G024060 Rw7G024070 Rw7G029090 Rw7G037010 Rw7G039170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 613
AccI GTMKAC 2 cut(s) 166, 232
AccII CGCG 3 cut(s) 49, 501, 503
AciI CCGC 1 cut(s) 716
AclWI GGATC 6 cut(s) 30, 52, 276, 404, 721, 893
AcsI RAATTY 3 cut(s) 139, 274, 472
AfaI GTAC 6 cut(s) 90, 131, 358, 567, 914, 1049
AfiI CCNNNNNNNGG 2 cut(s) 463, 1044
AflII CTTAAG 2 cut(s) 599, 863
AflIII ACRYGT 2 cut(s) 292, 376
AgsI TTSAA 5 cut(s) 8, 344, 353, 648, 757
AjnI CCWGG 1 cut(s) 134
AluBI AGCT 4 cut(s) 363, 674, 768, 938
AluI AGCT 4 cut(s) 363, 674, 768, 938
Alw26I GTCTC 2 cut(s) 88, 406
AlwI GGATC 6 cut(s) 30, 52, 276, 404, 721, 893
AoxI GGCC 2 cut(s) 95, 781
ApeKI GCWGC 3 cut(s) 245, 485, 938
ApoI RAATTY 3 cut(s) 139, 274, 472
AseI ATTAAT 1 cut(s) 588
Asp700I GAANNNNTTC 2 cut(s) 348, 533
AspLEI GCGC 2 cut(s) 501, 503
AspS9I GGNCC 3 cut(s) 114, 781, 878
AsuC2I CCSGG 2 cut(s) 112, 215
AsuHPI GGTGA 2 cut(s) 251, 547
AvaII GGWCC 2 cut(s) 114, 878
BbsI GAAGAC 1 cut(s) 338
BbvI GCAGC 3 cut(s) 232, 472, 925
BceAI ACGGC 1 cut(s) 213
BciT130I CCWGG 1 cut(s) 136
BciVI GTATCC 1 cut(s) 361
BcnI CCSGG 2 cut(s) 112, 215
BcoDI GTCTC 2 cut(s) 88, 406
BfaI CTAG 2 cut(s) 573, 935
BfrI CTTAAG 2 cut(s) 599, 863
BfuAI ACCTGC 1 cut(s) 613
BfuI GTATCC 1 cut(s) 361
BisI GCNGC 3 cut(s) 246, 486, 939
BlsI GCNGC 3 cut(s) 247, 487, 940
Bme1390I CCNGG 3 cut(s) 112, 136, 215
Bme18I GGWCC 2 cut(s) 114, 878
BmgT120I GGNCC 3 cut(s) 114, 781, 878
BmiI GGNNCC 1 cut(s) 879
BmrFI CCNGG 3 cut(s) 112, 136, 215
BmsI GCATC 3 cut(s) 232, 672, 853
BpiI GAAGAC 1 cut(s) 338
BpmI CTGGAG 1 cut(s) 118
Bpu10I CCTNAGC 1 cut(s) 663
BpuMI CCSGG 2 cut(s) 112, 215
BsaBI GATNNNNATC 1 cut(s) 43
BsaI GGTCTC 1 cut(s) 88
BsaJI CCNNGG 4 cut(s) 457, 686, 827, 881
Bsc4I CCNNNNNNNGG 2 cut(s) 463, 1044
Bse1I ACTGG 1 cut(s) 924
Bse8I GATNNNNATC 1 cut(s) 43
BseBI CCWGG 1 cut(s) 136
BseDI CCNNGG 4 cut(s) 457, 686, 827, 881
BseGI GGATG 2 cut(s) 522, 915
BseJI GATNNNNATC 1 cut(s) 43
BseLI CCNNNNNNNGG 2 cut(s) 463, 1044
BseMII CTCAG 1 cut(s) 417
BseNI ACTGG 1 cut(s) 924
BsePI GCGCGC 1 cut(s) 499
BseRI GAGGAG 1 cut(s) 1005
BseXI GCAGC 3 cut(s) 232, 472, 925
BseYI CCCAGC 1 cut(s) 363
Bsh1236I CGCG 3 cut(s) 49, 501, 503
Bsh1285I CGRYCG 2 cut(s) 53, 435
BshFI GGCC 2 cut(s) 97, 783
BsiEI CGRYCG 2 cut(s) 53, 435
BsiSI CCGG 2 cut(s) 112, 215
BslFI GGGAC 1 cut(s) 891
BslI CCNNNNNNNGG 2 cut(s) 463, 1044
BsmAI GTCTC 2 cut(s) 88, 406
BsmFI GGGAC 1 cut(s) 891
BsnI GGCC 2 cut(s) 97, 783
Bso31I GGTCTC 1 cut(s) 88
Bsp1407I TGTACA 2 cut(s) 565, 912
Bsp143I GATC 8 cut(s) 22, 38, 44, 268, 409, 432, 726, 885
Bsp19I CCATGG 2 cut(s) 686, 881
Bsp68I TCGCGA 1 cut(s) 49
BspACI CCGC 1 cut(s) 716
BspANI GGCC 2 cut(s) 97, 783
BspCNI CTCAG 1 cut(s) 416
BspFNI CGCG 3 cut(s) 49, 501, 503
BspLI GGNNCC 1 cut(s) 879
BspMI ACCTGC 1 cut(s) 613
BspPI GGATC 6 cut(s) 30, 52, 276, 404, 721, 893
BspQI GCTCTTC 2 cut(s) 495, 978
BspTI CTTAAG 2 cut(s) 599, 863
BspTNI GGTCTC 1 cut(s) 88
BsrGI TGTACA 2 cut(s) 565, 912
BsrI ACTGG 1 cut(s) 924
BssECI CCNNGG 4 cut(s) 457, 686, 827, 881
BssHII GCGCGC 1 cut(s) 499
BssMI GATC 8 cut(s) 22, 38, 44, 268, 409, 432, 726, 885
BssNAI GTATAC 1 cut(s) 233
BssT1I CCWWGG 4 cut(s) 457, 686, 827, 881
Bst1107I GTATAC 1 cut(s) 233
Bst2UI CCWGG 1 cut(s) 136
Bst4CI ACNGT 2 cut(s) 54, 570
Bst6I CTCTTC 2 cut(s) 495, 978
BstAFI CTTAAG 2 cut(s) 599, 863
BstAUI TGTACA 2 cut(s) 565, 912
BstC8I GCNNGC 3 cut(s) 104, 501, 990
BstDEI CTNAG 3 cut(s) 254, 403, 663
BstDSI CCRYGG 2 cut(s) 686, 881
BstF5I GGATG 2 cut(s) 522, 915
BstFNI CGCG 3 cut(s) 49, 501, 503
BstHHI GCGC 2 cut(s) 501, 503
BstKTI GATC 8 cut(s) 25, 41, 47, 271, 412, 435, 729, 888
BstMAI GTCTC 2 cut(s) 88, 406
BstMBI GATC 8 cut(s) 22, 38, 44, 268, 409, 432, 726, 885
BstMCI CGRYCG 2 cut(s) 53, 435
BstMWI GCNNNNNNNGC 4 cut(s) 103, 929, 938, 977
BstNI CCWGG 1 cut(s) 136
BstNSI RCATGY 2 cut(s) 208, 380
BstSCI CCNGG 3 cut(s) 110, 134, 213
BstUI CGCG 3 cut(s) 49, 501, 503
BstV1I GCAGC 3 cut(s) 232, 472, 925
BstV2I GAAGAC 1 cut(s) 338
BstXI CCANNNNNNTGG 2 cut(s) 41, 778
BstZ17I GTATAC 1 cut(s) 233
BsuI GTATCC 1 cut(s) 361
BsuRI GGCC 2 cut(s) 97, 783
BtgI CCRYGG 2 cut(s) 686, 881
BtsCI GGATG 2 cut(s) 522, 915
BtsI GCAGTG 1 cut(s) 966
BtsIMutI CAGTG 3 cut(s) 297, 507, 966
BtuMI TCGCGA 1 cut(s) 49
BveI ACCTGC 1 cut(s) 613
Cac8I GCNNGC 3 cut(s) 104, 501, 990
CfoI GCGC 2 cut(s) 501, 503
Cfr13I GGNCC 3 cut(s) 114, 781, 878
Csp6I GTAC 6 cut(s) 89, 130, 357, 566, 913, 1048
CviAII CATG 6 cut(s) 205, 377, 387, 687, 882, 929
CviQI GTAC 6 cut(s) 89, 130, 357, 566, 913, 1048
DdeI CTNAG 3 cut(s) 254, 403, 663
DpnI GATC 8 cut(s) 24, 40, 46, 270, 411, 434, 728, 887
DpnII GATC 8 cut(s) 22, 38, 44, 268, 409, 432, 726, 885
Eam1104I CTCTTC 2 cut(s) 495, 978
EarI CTCTTC 2 cut(s) 495, 978
Eco130I CCWWGG 4 cut(s) 457, 686, 827, 881
Eco31I GGTCTC 1 cut(s) 88
Eco47I GGWCC 2 cut(s) 114, 878
EcoRII CCWGG 1 cut(s) 134
EcoT14I CCWWGG 4 cut(s) 457, 686, 827, 881
EcoT22I ATGCAT 1 cut(s) 846
ErhI CCWWGG 4 cut(s) 457, 686, 827, 881
FaeI CATG 6 cut(s) 208, 380, 390, 690, 885, 932
FaqI GGGAC 1 cut(s) 891
FatI CATG 6 cut(s) 204, 376, 386, 686, 881, 928
FblI GTMKAC 2 cut(s) 166, 232
Fnu4HI GCNGC 3 cut(s) 246, 486, 939
FokI GGATG 2 cut(s) 509, 902
Fsp4HI GCNGC 3 cut(s) 246, 486, 939
FspBI CTAG 2 cut(s) 573, 935
GlaI GCGC 2 cut(s) 500, 502
GluI GCNGC 3 cut(s) 246, 486, 939
GsaI CCCAGC 1 cut(s) 367
GsuI CTGGAG 1 cut(s) 118
HaeIII GGCC 2 cut(s) 97, 783
HapII CCGG 2 cut(s) 112, 215
HhaI GCGC 2 cut(s) 501, 503
Hin1II CATG 6 cut(s) 208, 380, 390, 690, 885, 932
Hin6I GCGC 2 cut(s) 499, 501
HinP1I GCGC 2 cut(s) 499, 501
HinfI GANTC 2 cut(s) 8, 644
HpaII CCGG 2 cut(s) 112, 215
HphI GGTGA 2 cut(s) 251, 547
Hpy166II GTNNAC 4 cut(s) 167, 233, 466, 507
Hpy188I TCNGA 3 cut(s) 432, 1006, 1029
Hpy188III TCNNGA 6 cut(s) 42, 48, 526, 573, 648, 724
Hpy8I GTNNAC 4 cut(s) 167, 233, 466, 507
HpyAV CCTTC 3 cut(s) 437, 868, 944
HpyCH4III ACNGT 2 cut(s) 54, 570
HpyCH4IV ACGT 1 cut(s) 292
HpyCH4V TGCA 6 cut(s) 74, 208, 248, 398, 844, 896
HpyF10VI GCNNNNNNNGC 4 cut(s) 103, 929, 938, 977
HpyF3I CTNAG 3 cut(s) 254, 403, 663
HpySE526I ACGT 1 cut(s) 292
Hsp92II CATG 6 cut(s) 208, 380, 390, 690, 885, 932
HspAI GCGC 2 cut(s) 499, 501
Kzo9I GATC 8 cut(s) 22, 38, 44, 268, 409, 432, 726, 885
LguI GCTCTTC 2 cut(s) 495, 978
LmnI GCTCC 1 cut(s) 773
Lsp1109I GCAGC 3 cut(s) 232, 472, 925
LweI GCATC 3 cut(s) 232, 672, 853
MaeI CTAG 2 cut(s) 573, 935
MaeII ACGT 1 cut(s) 292
MaeIII GTNAC 2 cut(s) 295, 553
MalI GATC 8 cut(s) 24, 40, 46, 270, 411, 434, 728, 887
MboI GATC 8 cut(s) 22, 38, 44, 268, 409, 432, 726, 885
MboII GAAGA 7 cut(s) 340, 343, 482, 745, 798, 800, 965
MnlI CCTC 4 cut(s) 87, 471, 929, 1026
Mph1103I ATGCAT 1 cut(s) 846
MroXI GAANNNNTTC 2 cut(s) 348, 533
MseI TTAA 5 cut(s) 546, 588, 600, 864, 984
MspCI CTTAAG 2 cut(s) 599, 863
MspI CCGG 2 cut(s) 112, 215
MspR9I CCNGG 3 cut(s) 112, 136, 215
MvaI CCWGG 1 cut(s) 136
MvnI CGCG 3 cut(s) 49, 501, 503
MwoI GCNNNNNNNGC 4 cut(s) 103, 929, 938, 977
NciI CCSGG 2 cut(s) 112, 215
NcoI CCATGG 2 cut(s) 686, 881
NdeII GATC 8 cut(s) 22, 38, 44, 268, 409, 432, 726, 885
NlaIII CATG 6 cut(s) 208, 380, 390, 690, 885, 932
NlaIV GGNNCC 1 cut(s) 879
NmuCI GTSAC 2 cut(s) 295, 553
NruI TCGCGA 1 cut(s) 49
NsiI ATGCAT 1 cut(s) 846
NspI RCATGY 2 cut(s) 208, 380
PauI GCGCGC 1 cut(s) 499
PciI ACATGT 1 cut(s) 376
PciSI GCTCTTC 2 cut(s) 495, 978
PdmI GAANNNNTTC 2 cut(s) 348, 533
PfeI GAWTC 2 cut(s) 8, 644
PfoI TCCNGGA 1 cut(s) 134
PkrI GCNGC 3 cut(s) 247, 487, 940
Ple19I CGATCG 1 cut(s) 435
PscI ACATGT 1 cut(s) 376
PshBI ATTAAT 1 cut(s) 588
Psp6I CCWGG 1 cut(s) 134
PspFI CCCAGC 1 cut(s) 363
PspGI CCWGG 1 cut(s) 134
PspN4I GGNNCC 1 cut(s) 879
PspPI GGNCC 3 cut(s) 114, 781, 878
PsrI GAACNNNNNNTAC 2 cut(s) 294, 326
PteI GCGCGC 1 cut(s) 499
PvuI CGATCG 1 cut(s) 435
RruI TCGCGA 1 cut(s) 49
RsaI GTAC 6 cut(s) 90, 131, 358, 567, 914, 1049
RsaNI GTAC 6 cut(s) 89, 130, 357, 566, 913, 1048
SapI GCTCTTC 2 cut(s) 495, 978
SaqAI TTAA 5 cut(s) 546, 588, 600, 864, 984
SatI GCNGC 3 cut(s) 246, 486, 939
Sau3AI GATC 8 cut(s) 22, 38, 44, 268, 409, 432, 726, 885
Sau96I GGNCC 3 cut(s) 114, 781, 878
ScrFI CCNGG 3 cut(s) 112, 136, 215
SfaNI GCATC 3 cut(s) 232, 672, 853
SinI GGWCC 2 cut(s) 114, 878
SmlI CTYRAG 2 cut(s) 599, 863
SmoI CTYRAG 2 cut(s) 599, 863
SsiI CCGC 1 cut(s) 716
SspI AATATT 1 cut(s) 821
SspMI CTAG 2 cut(s) 573, 935
StyD4I CCNGG 3 cut(s) 110, 134, 213
StyI CCWWGG 4 cut(s) 457, 686, 827, 881
TaaI ACNGT 2 cut(s) 54, 570
TaiI ACGT 1 cut(s) 295
TaqI TCGA 2 cut(s) 584, 676
TatI WGTACW 2 cut(s) 565, 912
TfiI GAWTC 2 cut(s) 8, 644
Tru1I TTAA 5 cut(s) 546, 588, 600, 864, 984
Tru9I TTAA 5 cut(s) 546, 588, 600, 864, 984
TscAI CASTG 3 cut(s) 304, 514, 973
TseFI GTSAC 2 cut(s) 295, 553
TseI GCWGC 3 cut(s) 245, 485, 938
Tsp45I GTSAC 2 cut(s) 295, 553
TspDTI ATGAA 2 cut(s) 511, 872
TspGWI ACGGA 1 cut(s) 106
TspRI CASTG 3 cut(s) 304, 514, 973
Vha464I CTTAAG 2 cut(s) 599, 863
VpaK11BI GGWCC 2 cut(s) 114, 878
VspI ATTAAT 1 cut(s) 588
XapI RAATTY 3 cut(s) 139, 274, 472
XbaI TCTAGA 1 cut(s) 572
XceI RCATGY 2 cut(s) 208, 380
XmiI GTMKAC 2 cut(s) 166, 232
XmnI GAANNNNTTC 2 cut(s) 348, 533
XspI CTAG 2 cut(s) 573, 935
Zsp2I ATGCAT 1 cut(s) 846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.