Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 283 |
| AfaI | GTAC | 1 cut(s) | 217 |
| AflIII | ACRYGT | 1 cut(s) | 242 |
| AluBI | AGCT | 2 cut(s) | 122, 159 |
| AluI | AGCT | 2 cut(s) | 122, 159 |
| Alw21I | GWGCWC | 1 cut(s) | 14 |
| Ama87I | CYCGRG | 1 cut(s) | 39 |
| ApoI | RAATTY | 1 cut(s) | 283 |
| AvaI | CYCGRG | 1 cut(s) | 39 |
| Bbv12I | GWGCWC | 1 cut(s) | 14 |
| BccI | CCATC | 1 cut(s) | 43 |
| BciVI | GTATCC | 1 cut(s) | 124 |
| BfaI | CTAG | 2 cut(s) | 102, 219 |
| BfmI | CTRYAG | 1 cut(s) | 288 |
| BfuI | GTATCC | 1 cut(s) | 124 |
| BmcAI | AGTACT | 1 cut(s) | 217 |
| BmeT110I | CYCGRG | 1 cut(s) | 39 |
| BmsI | GCATC | 1 cut(s) | 160 |
| BsaAI | YACGTR | 1 cut(s) | 243 |
| BsiHKAI | GWGCWC | 1 cut(s) | 14 |
| BsiHKCI | CYCGRG | 1 cut(s) | 39 |
| BsoBI | CYCGRG | 1 cut(s) | 39 |
| Bsp1286I | GDGCHC | 1 cut(s) | 14 |
| Bst6I | CTCTTC | 1 cut(s) | 39 |
| BstBAI | YACGTR | 1 cut(s) | 243 |
| BstNSI | RCATGY | 1 cut(s) | 61 |
| BstSFI | CTRYAG | 1 cut(s) | 288 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 124 |
| BsuI | GTATCC | 1 cut(s) | 124 |
| BtsI | GCAGTG | 1 cut(s) | 180 |
| BtsIMutI | CAGTG | 1 cut(s) | 180 |
| Csp6I | GTAC | 1 cut(s) | 216 |
| CviAII | CATG | 2 cut(s) | 58, 71 |
| CviJI | RGCY | 4 cut(s) | 27, 122, 147, 159 |
| CviKI_1 | RGCY | 4 cut(s) | 27, 122, 147, 159 |
| CviQI | GTAC | 1 cut(s) | 216 |
| Eam1104I | CTCTTC | 1 cut(s) | 39 |
| EarI | CTCTTC | 1 cut(s) | 39 |
| Eco88I | CYCGRG | 1 cut(s) | 39 |
| FaeI | CATG | 2 cut(s) | 61, 74 |
| FaiI | YATR | 4 cut(s) | 24, 59, 72, 164 |
| FatI | CATG | 2 cut(s) | 57, 70 |
| FspBI | CTAG | 2 cut(s) | 102, 219 |
| Hin1II | CATG | 2 cut(s) | 61, 74 |
| HindIII | AAGCTT | 1 cut(s) | 120 |
| Hpy188I | TCNGA | 1 cut(s) | 97 |
| Hpy188III | TCNNGA | 3 cut(s) | 39, 41, 136 |
| HpyCH4IV | ACGT | 2 cut(s) | 129, 242 |
| HpyCH4V | TGCA | 2 cut(s) | 22, 173 |
| HpySE526I | ACGT | 2 cut(s) | 129, 242 |
| Hsp92II | CATG | 2 cut(s) | 61, 74 |
| LpnPI | CCDG | 2 cut(s) | 138, 171 |
| LweI | GCATC | 1 cut(s) | 160 |
| MaeI | CTAG | 2 cut(s) | 102, 219 |
| MaeII | ACGT | 2 cut(s) | 129, 242 |
| MboII | GAAGA | 1 cut(s) | 56 |
| MhlI | GDGCHC | 1 cut(s) | 14 |
| MluCI | AATT | 5 cut(s) | 5, 15, 64, 205, 283 |
| NlaIII | CATG | 2 cut(s) | 61, 74 |
| NspI | RCATGY | 1 cut(s) | 61 |
| PaeR7I | CTCGAG | 1 cut(s) | 39 |
| PflFI | GACNNNGTC | 1 cut(s) | 131 |
| Ppu21I | YACGTR | 1 cut(s) | 243 |
| PsyI | GACNNNGTC | 1 cut(s) | 131 |
| RsaI | GTAC | 1 cut(s) | 217 |
| RsaNI | GTAC | 1 cut(s) | 216 |
| ScaI | AGTACT | 1 cut(s) | 217 |
| SduI | GDGCHC | 1 cut(s) | 14 |
| SetI | ASST | 5 cut(s) | 103, 124, 132, 161, 245 |
| SfaNI | GCATC | 1 cut(s) | 160 |
| SfcI | CTRYAG | 1 cut(s) | 288 |
| Sfr274I | CTCGAG | 1 cut(s) | 39 |
| SlaI | CTCGAG | 1 cut(s) | 39 |
| SmlI | CTYRAG | 1 cut(s) | 39 |
| SmoI | CTYRAG | 1 cut(s) | 39 |
| Sse9I | AATT | 5 cut(s) | 5, 15, 64, 205, 283 |
| SspMI | CTAG | 2 cut(s) | 102, 219 |
| TaiI | ACGT | 2 cut(s) | 132, 245 |
| TaqI | TCGA | 2 cut(s) | 40, 274 |
| TasI | AATT | 5 cut(s) | 5, 15, 64, 205, 283 |
| TatI | WGTACW | 1 cut(s) | 215 |
| TscAI | CASTG | 1 cut(s) | 180 |
| TspDTI | ATGAA | 3 cut(s) | 17, 59, 151 |
| TspRI | CASTG | 1 cut(s) | 180 |
| Tth111I | GACNNNGTC | 1 cut(s) | 131 |
| XapI | RAATTY | 1 cut(s) | 283 |
| XceI | RCATGY | 1 cut(s) | 61 |
| XhoI | CTCGAG | 1 cut(s) | 39 |
| XspI | CTAG | 2 cut(s) | 102, 219 |
| ZrmI | AGTACT | 1 cut(s) | 217 |