Rorug07G0091400

acid phosphatase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000041
Physical Location & Seq
Forward (+)
7153288 .. 7156553
3266 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0091400.1

Sequence Viewer

Length: 1227 bp
ATGGGGAGCCATCGGAGAACATCTGAGACGTCGTCAAGGGCGGAGCTCCGGTCAAAGCTCACAAGAGTCGTACGAGGCCACGAACAAATGAAGACCGCTTTCCACCAACTGAAATCTCAGATCCAAATCGGCCTTCTCCAGGCCGAAGACGTCTTCGCGTCTCTGGCAATTCCGTTGATGAAGCTCTTAGGTCTCAAGACGGTGGAGATGGCGACGGAGGGCCGATTCACCTCCTTCATCATCCAAACAGATTCCGATTTGAGTTCTCAGTATCAGAATTTCGGAGCCGGATCTGGACCGTCGGGTCGGTCAGATCAGAACCGTCAGTGTGCGAAGATAGAGATCTACGCCGCCAAAGCGGCGGTGGCCGGCGATTTGGTAATCGAGAAGCAAAAAGATCAGCTGATTCAACTGGTTCGGATCCTGAAGCAAATCGAGTCCCAAGTCAACAATCGGCAGAGCCACATGGTCGAAACCCTAGCCAATCGCCGCCATTCCCTTCGCAAATTCTTCCAGAGAGCGATCGCCTACTTATCCACCGTTGACCGCGTTGACCAACGGGGGTTCCAGGTGGCGGTGCTGAACCTCCTCCGGGAAATTTTCAACGAAGTGAGTGCGGTTTTGGGGTCCGTGGAGGCTGACGTGGAGGACCTGGTGGAGAATTTGGCTGAGAAAATGTGTGAGCCAATGGTGGAATACGTGGAGGGGGTTAAGGCTGATTTGAGAAATGGGACTTGCTTGGGCCTAGTGGGCTTGGTGAAGGAGATGGCCAGGGCGGCGGGGGATTCGAGGGCGGAGCTGGAGGCGGCGAGGAATAAGGCCACGGTGGCAGAAGAGAGCAGAGCTGAGGCTATGAGGAGGCTCAGGGAATCAGAAGAATATGTGAGGAAATTGAAGGAATGCTTCAAGTTCTTGCCAGAGCCTAGTAAAGCATCCACCAAAGTAACCAAAGCCTGTGCTTTACATAAGATTTTAGGCATGGAGAAAGATCAAGCCCACGATGAGAAGCTGTTATGGGAGCTATTGGAAAAGAAGAGAAAGTATCAAACTCCAGAGAGTCCACTTGGACCCAGAGAGCTGCTTCCCCTTCATCAGTCCAAGCGCCAAAAGGCAACACGTGTAAAGCCACAAGTTGGTAGCAGCGCGTATTCACAGCGTTCAAGAACCCCACGTTTGGTGGCTGCTCGGATACCCTTGGGCTCATCCCCTTCAGTGACAATTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2 DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

408

Amino Acids

45.71

Weight (kDa)

9.57

Isoelectric Point (pI)

50.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01050
fragaria_vesca FvH4_1g24181 FvH4_1g28741 FvH4_1g29781 FvH4_2g00621 FvH4_2g04885 FvH4_2g11953 FvH4_2g11954 FvH4_2g12001 FvH4_2g12002 FvH4_2g12222 FvH4_2g12223 FvH4_2g38351 FvH4_3g04401 FvH4_3g31330 FvH4_3g33091 FvH4_4g11461 FvH4_5g27993 FvH4_5g27994 FvH4_5g28072 FvH4_5g28231 FvH4_5g28591 FvH4_5g34261 FvH4_6g18162 FvH4_6g25500 FvH4_6g25561 FvH4_6g25792 FvH4_6g27602 FvH4_6g46881
malus_domestica MD03G1019700.v1.1
prunus_persica Prupe.1G055400_v2.0.a1 Prupe.1G179200_v2.0.a1 Prupe.1G208200_v2.0.a1 Prupe.1G231200_v2.0.a1 Prupe.2G044900_v2.0.a1 Prupe.2G055100_v2.0.a1 Prupe.2G097600_v2.0.a1 Prupe.2G114200_v2.0.a1 Prupe.3G109000_v2.0.a1 Prupe.3G109300_v2.0.a1 Prupe.3G109600_v2.0.a1 Prupe.4G246900_v2.0.a1 Prupe.5G026400_v2.0.a1
pyrus_communis pycom05g17130 pycom07g06820 pycom07g18590 pycom07g22730 pycom12401g00120 pycom12401g00180 pycom420g00470
rosa_chinensis RchiOBHm_Chr1g0342591 RchiOBHm_Chr1g0342601 RchiOBHm_Chr1g0342611 RchiOBHm_Chr1g0351011 RchiOBHm_Chr2g0146151 RchiOBHm_Chr2g0171821 RchiOBHm_Chr3g0492921 RchiOBHm_Chr3g0492931 RchiOBHm_Chr4g0406871 RchiOBHm_Chr4g0426311 RchiOBHm_Chr5g0020721 RchiOBHm_Chr5g0050111 RchiOBHm_Chr5g0051681 RchiOBHm_Chr5g0053531 RchiOBHm_Chr5g0054841 RchiOBHm_Chr5g0055061 RchiOBHm_Chr5g0055071 RchiOBHm_Chr6g0248911 RchiOBHm_Chr6g0291741 RchiOBHm_Chr7g0187781 RchiOBHm_Chr7g0220081 RchiOBHm_Chr7g0224391 RchiOBHm_Chr7g0235221
rosa_laevigata RLG00000002133 RLG00000002402 RLG00000002736 RLG00000011046 RLG00000013214 RLG00000016550 RLG00000021669 RLG00000022948 RLG00000023691 RLG00000024682 RLG00000027826 RLG00000029734 RLG00000029831 RLG00000030305 RLG00000037042
rosa_multiflora Rmu_co7992532.1_g000001 Rmu_co8021462.1_g000001 Rmu_co8229237.1_g000001 Rmu_co8281571.1_g000001 Rmu_co8326451.1_g000001 Rmu_co8359553.1_g000001 Rmu_co8372117.1_g000001 Rmu_co8427177.1_g000001 Rmu_co8474063.1_g000002 Rmu_sc0000007.1_g000020 Rmu_sc0000173.1_g000002 Rmu_sc0000367.1_g000086 Rmu_sc0000367.1_g000088 Rmu_sc0000559.1_g000002 Rmu_sc0000733.1_g000014 Rmu_sc0000745.1_g000006 Rmu_sc0000791.1_g000046 Rmu_sc0000791.1_g000049 Rmu_sc0000824.1_g000010 Rmu_sc0000824.1_g000011 Rmu_sc0000834.1_g000009 Rmu_sc0000834.1_g000011 Rmu_sc0000911.1_g000020 Rmu_sc0000935.1_g000034 Rmu_sc0000935.1_g000051 Rmu_sc0000935.1_g000053 Rmu_sc0001000.1_g000005 Rmu_sc0001000.1_g000006 Rmu_sc0001150.1_g000004 Rmu_sc0001227.1_g000002 Rmu_sc0001322.1_g000018 Rmu_sc0001343.1_g000001 Rmu_sc0001356.1_g000004 Rmu_sc0001356.1_g000005 Rmu_sc0001363.1_g000007 Rmu_sc0001463.1_g000012 Rmu_sc0001484.1_g000023 Rmu_sc0001516.1_g000003 Rmu_sc0001516.1_g000005 Rmu_sc0001619.1_g000005 Rmu_sc0001648.1_g000032 Rmu_sc0001648.1_g000035 Rmu_sc0001694.1_g000008 Rmu_sc0001809.1_g000023 Rmu_sc0002093.1_g000027 Rmu_sc0002231.1_g000004 Rmu_sc0002245.1_g000001 Rmu_sc0002245.1_g000003 Rmu_sc0002354.1_g000045 Rmu_sc0002354.1_g000048 Rmu_sc0002368.1_g000014 Rmu_sc0002368.1_g000016 Rmu_sc0002368.1_g000017 Rmu_sc0002401.1_g000030 Rmu_sc0002487.1_g000012 Rmu_sc0002798.1_g000028 Rmu_sc0002923.1_g000012 Rmu_sc0002960.1_g000002 Rmu_sc0003033.1_g000072 Rmu_sc0003133.1_g000015 Rmu_sc0003168.1_g000007 Rmu_sc0003945.1_g000002 Rmu_sc0003945.1_g000004 Rmu_sc0003945.1_g000005 Rmu_sc0003979.1_g000004 Rmu_sc0004005.1_g000007 Rmu_sc0004059.1_g000018 Rmu_sc0004064.1_g000001 Rmu_sc0004083.1_g000007 Rmu_sc0004083.1_g000008 Rmu_sc0004354.1_g000033 Rmu_sc0004368.1_g000035 Rmu_sc0004483.1_g000032 Rmu_sc0004646.1_g000012 Rmu_sc0005014.1_g000006 Rmu_sc0005016.1_g000046 Rmu_sc0005016.1_g000051 Rmu_sc0005033.1_g000005 Rmu_sc0005033.1_g000007 Rmu_sc0005065.1_g000002 Rmu_sc0005065.1_g000004 Rmu_sc0005168.1_g000012 Rmu_sc0005238.1_g000001 Rmu_sc0005365.1_g000012 Rmu_sc0005631.1_g000005 Rmu_sc0005704.1_g000013 Rmu_sc0005704.1_g000014 Rmu_sc0005781.1_g000030 Rmu_sc0005789.1_g000016 Rmu_sc0006185.1_g000001 Rmu_sc0006185.1_g000002 Rmu_sc0006266.1_g000044 Rmu_sc0006561.1_g000018 Rmu_sc0006695.1_g000016 Rmu_sc0007739.1_g000022 Rmu_sc0008050.1_g000013 Rmu_sc0008169.1_g000006 Rmu_sc0008855.1_g000006 Rmu_sc0009298.1_g000002 Rmu_sc0009495.1_g000005 Rmu_sc0010608.1_g000003 Rmu_sc0010958.1_g000005 Rmu_sc0011506.1_g000001 Rmu_sc0011790.1_g000002 Rmu_sc0011790.1_g000003 Rmu_sc0012042.1_g000004 Rmu_sc0012042.1_g000005 Rmu_sc0012140.1_g000020 Rmu_sc0012726.1_g000005 Rmu_sc0012746.1_g000023 Rmu_sc0013193.1_g000002 Rmu_sc0013193.1_g000003 Rmu_sc0017997.1_g000001 Rmu_sc0021401.1_g000001 Rmu_sc0025959.1_g000001 Rmu_sc0026403.1_g000003 Rmu_sc0028616.1_g000002 Rmu_sc0029801.1_g000002 Rmu_sc0032453.1_g000001 Rmu_sc0033672.1_g000002 Rmu_sc0034553.1_g000001 Rmu_sc0036883.1_g000001 Rmu_ssc0000096.1_g000001 Rmu_ssc0000158.1_g000031 Rmu_ssc0000291.1_g000034 Rmu_ssc0000381.1_g000026 Rmu_ssc0000387.1_g000010 Rmu_ssc0000474.1_g000002 Rmu_ssc0000474.1_g000004
rosa_roxburghii Rroxscaffold_1G00020090 Rroxscaffold_1G00020100 Rroxscaffold_1G00022940 Rroxscaffold_1G00044600 Rroxscaffold_1G00054420 Rroxscaffold_1G00054430 Rroxscaffold_1G00056440 Rroxscaffold_2G00090180 Rroxscaffold_2G00101250 Rroxscaffold_2G00110600 Rroxscaffold_2G00152800 Rroxscaffold_4G00320370 Rroxscaffold_4G00320640 Rroxscaffold_4G00322420 Rroxscaffold_4G00324670 Rroxscaffold_5G00332760 Rroxscaffold_5G00345010 Rroxscaffold_5G00345020 Rroxscaffold_5G00355470 Rroxscaffold_5G00385520 Rroxscaffold_6G00394610 Rroxscaffold_6G00394700 Rroxscaffold_7G00164190 Rroxscaffold_7G00182750 Rroxscaffold_7G00183540 Rroxscaffold_7G00203520 Rroxscaffold_7G00211630
rosa_rugosa Rorug01G0041400 Rorug01G0041500 Rorug01G0065300 Rorug01G0065300 Rorug01G0069700 Rorug01G0069800 Rorug01G0070300 Rorug01G0072300 Rorug01G0072900 Rorug01G0093100 Rorug01G0147100.1 Rorug01G0196900 Rorug01G0259700 Rorug02G0162000 Rorug02G0182700 Rorug02G0212300 Rorug02G0214700 Rorug02G0229900 Rorug02G0246100 Rorug02G0257400 Rorug02G0259100 Rorug02G0341400 Rorug02G0341500 Rorug02G0341700 Rorug02G0341800 Rorug02G0355600 Rorug02G0386100 Rorug02G0386100 Rorug02G0387000 Rorug02G0387100 Rorug02G0388400 Rorug02G0388500 Rorug02G0429100 Rorug02G0429100 Rorug02G0455300 Rorug02G0634400 Rorug03G0163200 Rorug03G0198500 Rorug03G0199600 Rorug03G0204000 Rorug03G0265600 Rorug03G0266100 Rorug03G0266200 Rorug03G0280600 Rorug03G0348200 Rorug03G0349700 Rorug03G0349800 Rorug04G0020200 Rorug04G0073700 Rorug04G0215000 Rorug04G0426100 Rorug05G0064200 Rorug05G0064300 Rorug05G0265700 Rorug05G0287400 Rorug05G0287500 Rorug05G0287500 Rorug05G0405000 Rorug05G0525700 Rorug05G0525800 Rorug05G0588200 Rorug06G0038200 Rorug06G0057900 Rorug06G0058000 Rorug06G0058500 Rorug06G0058600 Rorug06G0116700 Rorug06G0159300.1 Rorug06G0159400 Rorug06G0174700 Rorug06G0375500 Rorug07G0091400 Rorug07G0094900 Rorug07G0108100 Rorug07G0140700 Rorug07G0140700 Rorug07G0207100 Rorug07G0207100 Rorug07G0207200 Rorug07G0287300
rosa_samantha Rh1AG100100 Rh1AG104500 Rh1BG150700 Rh1BG237700 Rh1BG334000 Rh1CG090000 Rh1CG100100 Rh1CG347300 Rh1DG090500 Rh1DG096100 Rh1DG107400 Rh1DG182500 Rh1DG265700 Rh1DG365200 Rh2BG256800 Rh2BG361300 Rh2BG468600 Rh2BG549800 Rh2CG270900 Rh2DG276700 Rh2DG276800 Rh2DG377700 Rh2DG477900 Rh3AG161200 Rh3BG138800 Rh3BG185700 Rh3BG269600 Rh3CG176000 Rh4AG006100 Rh4AG216700 Rh4AG355800 Rh4CG108600 Rh5AG141700 Rh5AG480000 Rh5BG014500 Rh5BG134600 Rh5BG295400 Rh5BG552900 Rh5CG058600 Rh5CG286400 Rh5CG350900 Rh5CG575800 Rh5DG004300 Rh5DG254600 Rh5DG356500 Rh6AG106500 Rh6AG191100 Rh6AG224700 Rh6BG074700 Rh6BG181400 Rh6BG352200 Rh6BG408400 Rh6BG453600 Rh6CG047400 Rh6CG172200 Rh6CG189400 Rh6CG515800 Rh6DG042900 Rh6DG163400 Rh7AG089300 Rh7AG227400 Rh7AG275600 Rh7AG375100 Rh7AG460900 Rh7AG485200 Rh7BG146100 Rh7BG354300 Rh7CG077100 Rh7CG294500 Rh7CG393800 Rh7DG041700 Rh7DG062700 Rh7DG091700 Rh7DG178900 Rh7DG192300 Rh7DG297000 Rh7DG403600 Rh7DG411800
rosa_wichuraiana Rw0G007100 Rw0G011430 Rw1G003580 Rw1G004040 Rw1G005880 Rw1G009860 Rw1G009990 Rw1G012190 Rw1G012200 Rw1G013740 Rw1G013750 Rw1G016710 Rw1G021050 Rw2G023790 Rw2G028810 Rw2G035890 Rw2G036250 Rw4G008880 Rw4G014380 Rw4G014390 Rw4G016020 Rw4G037160 Rw5G010060 Rw5G030620 Rw5G033840 Rw5G049840 Rw5G049850 Rw6G003450 Rw6G015080 Rw7G019640 Rw7G024060 Rw7G024070 Rw7G029090 Rw7G037010 Rw7G039170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 303
AatII GACGTC 2 cut(s) 32, 153
AccB7I CCANNNNNTGG 1 cut(s) 1133
AccII CGCG 3 cut(s) 158, 549, 1145
AclWI GGATC 4 cut(s) 115, 298, 415, 428
AcoI YGGCCR 2 cut(s) 366, 768
AcsI RAATTY 4 cut(s) 277, 506, 597, 661
AcuI CTGAAG 2 cut(s) 446, 1194
AcvI CACGTG 1 cut(s) 1118
AcyI GRCGYC 2 cut(s) 29, 150
AfaI GTAC 1 cut(s) 72
AfiI CCNNNNNNNGG 5 cut(s) 139, 574, 592, 1133, 1174
AflIII ACRYGT 2 cut(s) 1115, 1117
AgsI TTSAA 5 cut(s) 410, 604, 895, 907, 1161
AjiI CACGTC 1 cut(s) 643
AjnI CCWGG 4 cut(s) 138, 567, 651, 770
AjuI GAANNNNNNNTTGG 2 cut(s) 117, 149
AluBI AGCT 9 cut(s) 46, 58, 184, 403, 799, 845, 1009, 1021, 1078
AluI AGCT 9 cut(s) 46, 58, 184, 403, 799, 845, 1009, 1021, 1078
Alw21I GWGCWC 1 cut(s) 48
Alw26I GTCTC 3 cut(s) 20, 165, 197
AlwI GGATC 4 cut(s) 115, 298, 415, 428
AoxI GGCC 8 cut(s) 76, 130, 141, 220, 366, 742, 768, 819
ApeKI GCWGC 3 cut(s) 1078, 1140, 1181
ApoI RAATTY 4 cut(s) 277, 506, 597, 661
AsiSI GCGATCGC 1 cut(s) 525
AspLEI GCGC 2 cut(s) 1104, 1145
AspS9I GGNCC 6 cut(s) 220, 296, 627, 649, 742, 1067
AsuC2I CCSGG 1 cut(s) 593
AsuHPI GGTGA 2 cut(s) 220, 769
AvaII GGWCC 4 cut(s) 296, 627, 649, 1067
BalI TGGCCA 1 cut(s) 770
BamHI GGATCC 1 cut(s) 420
BanII GRGCYC 2 cut(s) 48, 1202
BbrPI CACGTG 1 cut(s) 1118
BbsI GAAGAC 3 cut(s) 98, 145, 153
Bbv12I GWGCWC 1 cut(s) 48
BbvCI CCTCAGC 1 cut(s) 846
BbvI GCAGC 3 cut(s) 1065, 1152, 1168
BccI CCATC 3 cut(s) 18, 202, 760
BcgI CGANNNNNNTGC 2 cut(s) 596, 630
BciT130I CCWGG 4 cut(s) 140, 569, 653, 772
BciVI GTATCC 1 cut(s) 1182
BcnI CCSGG 1 cut(s) 593
BcoDI GTCTC 3 cut(s) 20, 165, 197
BfaI CTAG 3 cut(s) 479, 746, 924
BfoI RGCGCY 1 cut(s) 1105
BfuI GTATCC 1 cut(s) 1182
BglI GCCNNNNNGGC 4 cut(s) 359, 750, 776, 827
BglII AGATCT 1 cut(s) 342
BisI GCNGC 8 cut(s) 351, 360, 490, 777, 807, 1079, 1141, 1182
BlsI GCNGC 8 cut(s) 352, 361, 491, 778, 808, 1080, 1142, 1183
Bme1390I CCNGG 5 cut(s) 140, 569, 593, 653, 772
Bme18I GGWCC 4 cut(s) 296, 627, 649, 1067
BmgBI CACGTC 1 cut(s) 643
BmgT120I GGNCC 6 cut(s) 220, 296, 627, 649, 742, 1067
BmiI GGNNCC 6 cut(s) 8, 286, 422, 566, 628, 1069
BmrFI CCNGG 5 cut(s) 140, 569, 593, 653, 772
BmsI GCATC 1 cut(s) 941
BpiI GAAGAC 3 cut(s) 98, 145, 153
BpmI CTGGAG 3 cut(s) 122, 821, 1035
Bpu10I CCTNAGC 2 cut(s) 846, 863
BpuEI CTTGAG 1 cut(s) 179
BpuMI CCSGG 1 cut(s) 593
BsaAI YACGTR 2 cut(s) 700, 1118
BsaBI GATNNNNATC 2 cut(s) 125, 341
BsaHI GRCGYC 2 cut(s) 29, 150
BsaI GGTCTC 1 cut(s) 197
BsaJI CCNNGG 4 cut(s) 630, 771, 822, 1194
BsaWI WCCGGW 1 cut(s) 48
BsaXI ACNNNNNCTCC 2 cut(s) 35, 65
Bsc4I CCNNNNNNNGG 5 cut(s) 139, 574, 592, 1133, 1174
Bse118I RCCGGY 1 cut(s) 368
Bse1I ACTGG 1 cut(s) 417
Bse8I GATNNNNATC 2 cut(s) 125, 341
BseBI CCWGG 4 cut(s) 140, 569, 653, 772
BseDI CCNNGG 4 cut(s) 630, 771, 822, 1194
BseGI GGATG 3 cut(s) 240, 932, 1202
BseJI GATNNNNATC 2 cut(s) 125, 341
BseLI CCNNNNNNNGG 5 cut(s) 139, 574, 592, 1133, 1174
BseMII CTCAG 6 cut(s) 15, 131, 281, 660, 837, 877
BseNI ACTGG 1 cut(s) 417
BseRI GAGGAG 2 cut(s) 578, 871
BseXI GCAGC 3 cut(s) 1065, 1152, 1168
Bsh1236I CGCG 3 cut(s) 158, 549, 1145
Bsh1285I CGRYCG 1 cut(s) 525
BshFI GGCC 8 cut(s) 78, 132, 143, 222, 368, 744, 770, 821
BsiEI CGRYCG 1 cut(s) 525
BsiHKAI GWGCWC 1 cut(s) 48
BsiSI CCGG 4 cut(s) 49, 288, 369, 592
BsiWI CGTACG 1 cut(s) 70
BslFI GGGAC 2 cut(s) 424, 745
BslI CCNNNNNNNGG 5 cut(s) 139, 574, 592, 1133, 1174
BsmAI GTCTC 3 cut(s) 20, 165, 197
BsmBI CGTCTC 2 cut(s) 20, 165
BsmFI GGGAC 2 cut(s) 424, 745
BsmI GAATGC 1 cut(s) 905
BsnI GGCC 8 cut(s) 78, 132, 143, 222, 368, 744, 770, 821
Bso31I GGTCTC 1 cut(s) 197
Bsp1286I GDGCHC 2 cut(s) 48, 1202
Bsp143I GATC 8 cut(s) 120, 290, 313, 342, 397, 420, 522, 988
BspANI GGCC 8 cut(s) 78, 132, 143, 222, 368, 744, 770, 821
BspCNI CTCAG 6 cut(s) 16, 130, 280, 661, 838, 876
BspFNI CGCG 3 cut(s) 158, 549, 1145
BspLI GGNNCC 6 cut(s) 8, 286, 422, 566, 628, 1069
BspPI GGATC 4 cut(s) 115, 298, 415, 428
BspTNI GGTCTC 1 cut(s) 197
BsrFI RCCGGY 1 cut(s) 368
BsrI ACTGG 1 cut(s) 417
BssAI RCCGGY 1 cut(s) 368
BssECI CCNNGG 4 cut(s) 630, 771, 822, 1194
BssMI GATC 8 cut(s) 120, 290, 313, 342, 397, 420, 522, 988
BssNI GRCGYC 2 cut(s) 29, 150
BssT1I CCWWGG 1 cut(s) 1194
Bst2UI CCWGG 4 cut(s) 140, 569, 653, 772
Bst4CI ACNGT 5 cut(s) 202, 300, 323, 541, 826
Bst6I CTCTTC 2 cut(s) 828, 1028
BstACI GRCGYC 2 cut(s) 29, 150
BstBAI YACGTR 2 cut(s) 700, 1118
BstC8I GCNNGC 1 cut(s) 370
BstDEI CTNAG 7 cut(s) 24, 117, 187, 267, 669, 846, 863
BstDSI CCRYGG 2 cut(s) 630, 822
BstENI CCTNNNNNAGG 1 cut(s) 137
BstF5I GGATG 3 cut(s) 240, 932, 1202
BstFNI CGCG 3 cut(s) 158, 549, 1145
BstH2I RGCGCY 1 cut(s) 1105
BstHHI GCGC 2 cut(s) 1104, 1145
BstKTI GATC 8 cut(s) 123, 293, 316, 345, 400, 423, 525, 991
BstMAI GTCTC 3 cut(s) 20, 165, 197
BstMBI GATC 8 cut(s) 120, 290, 313, 342, 397, 420, 522, 988
BstMCI CGRYCG 1 cut(s) 525
BstMWI GCNNNNNNNGC 7 cut(s) 164, 356, 359, 365, 750, 776, 827
BstNI CCWGG 4 cut(s) 140, 569, 653, 772
BstSCI CCNGG 5 cut(s) 138, 567, 591, 651, 770
BstUI CGCG 3 cut(s) 158, 549, 1145
BstV1I GCAGC 3 cut(s) 1065, 1152, 1168
BstV2I GAAGAC 3 cut(s) 98, 145, 153
BstX2I RGATCY 4 cut(s) 120, 290, 342, 420
BstYI RGATCY 4 cut(s) 120, 290, 342, 420
BsuI GTATCC 1 cut(s) 1182
BsuRI GGCC 8 cut(s) 78, 132, 143, 222, 368, 744, 770, 821
BtgI CCRYGG 2 cut(s) 630, 822
BtrI CACGTC 1 cut(s) 643
BtsCI GGATG 3 cut(s) 240, 932, 1202
BtsIMutI CAGTG 2 cut(s) 332, 1218
Cac8I GCNNGC 1 cut(s) 370
CfoI GCGC 2 cut(s) 1104, 1145
Cfr10I RCCGGY 1 cut(s) 368
Cfr13I GGNCC 6 cut(s) 220, 296, 627, 649, 742, 1067
CseI GACGC 1 cut(s) 147
CsiI ACCWGGT 1 cut(s) 651
Csp6I GTAC 1 cut(s) 71
CviAII CATG 2 cut(s) 466, 979
CviQI GTAC 1 cut(s) 71
DdeI CTNAG 7 cut(s) 24, 117, 187, 267, 669, 846, 863
DpnI GATC 8 cut(s) 122, 292, 315, 344, 399, 422, 524, 990
DpnII GATC 8 cut(s) 120, 290, 313, 342, 397, 420, 522, 988
DrdI GACNNNNNNGTC 1 cut(s) 303
DseDI GACNNNNNNGTC 1 cut(s) 303
EaeI YGGCCR 2 cut(s) 366, 768
Eam1104I CTCTTC 2 cut(s) 828, 1028
EarI CTCTTC 2 cut(s) 828, 1028
EciI GGCGGA 2 cut(s) 56, 809
Ecl136II GAGCTC 1 cut(s) 46
Eco130I CCWWGG 1 cut(s) 1194
Eco24I GRGCYC 2 cut(s) 48, 1202
Eco31I GGTCTC 1 cut(s) 197
Eco47I GGWCC 4 cut(s) 296, 627, 649, 1067
Eco53kI GAGCTC 1 cut(s) 46
Eco57I CTGAAG 2 cut(s) 446, 1194
Eco72I CACGTG 1 cut(s) 1118
EcoICRI GAGCTC 1 cut(s) 46
EcoNI CCTNNNNNAGG 1 cut(s) 137
EcoO109I RGGNCCY 1 cut(s) 649
EcoRII CCWGG 4 cut(s) 138, 567, 651, 770
EcoT14I CCWWGG 1 cut(s) 1194
EcoT38I GRGCYC 2 cut(s) 48, 1202
ErhI CCWWGG 1 cut(s) 1194
Esp3I CGTCTC 2 cut(s) 20, 165
FaeI CATG 2 cut(s) 469, 982
FaiI YATR 6 cut(s) 467, 854, 882, 966, 980, 1015
FalI AAGNNNNNCTT 2 cut(s) 887, 919
FaqI GGGAC 2 cut(s) 424, 745
FatI CATG 2 cut(s) 465, 978
FauI CCCGC 1 cut(s) 772
Fnu4HI GCNGC 8 cut(s) 351, 360, 490, 777, 807, 1079, 1141, 1182
FokI GGATG 3 cut(s) 227, 919, 1189
FriOI GRGCYC 2 cut(s) 48, 1202
Fsp4HI GCNGC 8 cut(s) 351, 360, 490, 777, 807, 1079, 1141, 1182
FspBI CTAG 3 cut(s) 479, 746, 924
GlaI GCGC 2 cut(s) 1103, 1144
GluI GCNGC 8 cut(s) 351, 360, 490, 777, 807, 1079, 1141, 1182
GsuI CTGGAG 3 cut(s) 122, 821, 1035
HaeII RGCGCY 1 cut(s) 1105
HaeIII GGCC 8 cut(s) 78, 132, 143, 222, 368, 744, 770, 821
HapII CCGG 4 cut(s) 49, 288, 369, 592
HgaI GACGC 1 cut(s) 147
HhaI GCGC 2 cut(s) 1104, 1145
Hin1I GRCGYC 2 cut(s) 29, 150
Hin1II CATG 2 cut(s) 469, 982
Hin6I GCGC 2 cut(s) 1102, 1143
HinP1I GCGC 2 cut(s) 1102, 1143
HincII GTYRAC 3 cut(s) 448, 544, 553
HindII GTYRAC 3 cut(s) 448, 544, 553
HinfI GANTC 8 cut(s) 66, 225, 251, 406, 437, 785, 869, 1057
HpaII CCGG 4 cut(s) 49, 288, 369, 592
HphI GGTGA 2 cut(s) 220, 769
Hpy166II GTNNAC 4 cut(s) 448, 544, 553, 1061
Hpy188III TCNNGA 7 cut(s) 196, 294, 385, 424, 514, 1052, 1161
Hpy8I GTNNAC 4 cut(s) 448, 544, 553, 1061
Hpy99I CGWCG 3 cut(s) 34, 217, 304
HpyAV CCTTC 7 cut(s) 143, 244, 509, 754, 889, 1097, 1218
HpyCH4III ACNGT 5 cut(s) 202, 300, 323, 541, 826
HpyCH4IV ACGT 6 cut(s) 29, 150, 642, 699, 1117, 1171
HpyF10VI GCNNNNNNNGC 7 cut(s) 164, 356, 359, 365, 750, 776, 827
HpyF3I CTNAG 7 cut(s) 24, 117, 187, 267, 669, 846, 863
HpySE526I ACGT 6 cut(s) 29, 150, 642, 699, 1117, 1171
Hsp92I GRCGYC 2 cut(s) 29, 150
Hsp92II CATG 2 cut(s) 469, 982
HspAI GCGC 2 cut(s) 1102, 1143
KroI GCCGGC 1 cut(s) 368
KroNI GCCGGC 1 cut(s) 370
Kzo9I GATC 8 cut(s) 120, 290, 313, 342, 397, 420, 522, 988
LmnI GCTCC 6 cut(s) 6, 43, 51, 284, 796, 1018
Lsp1109I GCAGC 3 cut(s) 1065, 1152, 1168
LweI GCATC 1 cut(s) 941
MabI ACCWGGT 1 cut(s) 651
MaeI CTAG 3 cut(s) 479, 746, 924
MaeII ACGT 6 cut(s) 29, 150, 642, 699, 1117, 1171
MaeIII GTNAC 2 cut(s) 943, 1213
MalI GATC 8 cut(s) 122, 292, 315, 344, 399, 422, 524, 990
MboI GATC 8 cut(s) 120, 290, 313, 342, 397, 420, 522, 988
MboII GAAGA 8 cut(s) 103, 145, 158, 346, 502, 845, 887, 1045
MflI RGATCY 4 cut(s) 120, 290, 342, 420
MhlI GDGCHC 2 cut(s) 48, 1202
MlsI TGGCCA 1 cut(s) 770
MluCI AATT 7 cut(s) 168, 277, 506, 597, 661, 890, 1218
MluNI TGGCCA 1 cut(s) 770
MlyI GAGTC 3 cut(s) 75, 446, 1066
Mox20I TGGCCA 1 cut(s) 770
MroNI GCCGGC 1 cut(s) 368
MscI TGGCCA 1 cut(s) 770
MseI TTAA 1 cut(s) 711
Msp20I TGGCCA 1 cut(s) 770
MspA1I CMGCKG 1 cut(s) 403
MspI CCGG 4 cut(s) 49, 288, 369, 592
MspR9I CCNGG 5 cut(s) 140, 569, 593, 653, 772
Mva1269I GAATGC 1 cut(s) 905
MvaI CCWGG 4 cut(s) 140, 569, 653, 772
MvnI CGCG 3 cut(s) 158, 549, 1145
MwoI GCNNNNNNNGC 7 cut(s) 164, 356, 359, 365, 750, 776, 827
NaeI GCCGGC 1 cut(s) 370
NciI CCSGG 1 cut(s) 593
NdeII GATC 8 cut(s) 120, 290, 313, 342, 397, 420, 522, 988
NgoMIV GCCGGC 1 cut(s) 368
NlaIII CATG 2 cut(s) 469, 982
NlaIV GGNNCC 6 cut(s) 8, 286, 422, 566, 628, 1069
NmuCI GTSAC 1 cut(s) 1213
PctI GAATGC 1 cut(s) 905
PdiI GCCGGC 1 cut(s) 370
PfeI GAWTC 5 cut(s) 225, 251, 406, 785, 869
Pfl23II CGTACG 1 cut(s) 70
PflFI GACNNNGTC 1 cut(s) 31
PflMI CCANNNNNTGG 1 cut(s) 1133
PfoI TCCNGGA 1 cut(s) 591
PkrI GCNGC 8 cut(s) 352, 361, 491, 778, 808, 1080, 1142, 1183
Ple19I CGATCG 1 cut(s) 525
PleI GAGTC 3 cut(s) 74, 445, 1065
PmaCI CACGTG 1 cut(s) 1118
PmlI CACGTG 1 cut(s) 1118
PpsI GAGTC 3 cut(s) 74, 445, 1065
Ppu21I YACGTR 2 cut(s) 700, 1118
PpuMI RGGWCCY 1 cut(s) 649
Psp124BI GAGCTC 1 cut(s) 48
Psp5II RGGWCCY 1 cut(s) 649
Psp6I CCWGG 4 cut(s) 138, 567, 651, 770
PspCI CACGTG 1 cut(s) 1118
PspGI CCWGG 4 cut(s) 138, 567, 651, 770
PspLI CGTACG 1 cut(s) 70
PspN4I GGNNCC 6 cut(s) 8, 286, 422, 566, 628, 1069
PspPI GGNCC 6 cut(s) 220, 296, 627, 649, 742, 1067
PspPPI RGGWCCY 1 cut(s) 649
PsuI RGATCY 4 cut(s) 120, 290, 342, 420
PsyI GACNNNGTC 1 cut(s) 31
PvuI CGATCG 1 cut(s) 525
PvuII CAGCTG 1 cut(s) 403
RgaI GCGATCGC 1 cut(s) 525
RsaI GTAC 1 cut(s) 72
RsaNI GTAC 1 cut(s) 71
SacI GAGCTC 1 cut(s) 48
SaqAI TTAA 1 cut(s) 711
SatI GCNGC 8 cut(s) 351, 360, 490, 777, 807, 1079, 1141, 1182
Sau3AI GATC 8 cut(s) 120, 290, 313, 342, 397, 420, 522, 988
Sau96I GGNCC 6 cut(s) 220, 296, 627, 649, 742, 1067
SchI GAGTC 3 cut(s) 75, 446, 1066
ScrFI CCNGG 5 cut(s) 140, 569, 593, 653, 772
SduI GDGCHC 2 cut(s) 48, 1202
SexAI ACCWGGT 1 cut(s) 651
SfaAI GCGATCGC 1 cut(s) 525
SfaNI GCATC 1 cut(s) 941
SgfI GCGATCGC 1 cut(s) 525
SinI GGWCC 4 cut(s) 296, 627, 649, 1067
SmlI CTYRAG 1 cut(s) 194
SmoI CTYRAG 1 cut(s) 194
Sse9I AATT 7 cut(s) 168, 277, 506, 597, 661, 890, 1218
SspMI CTAG 3 cut(s) 479, 746, 924
SstI GAGCTC 1 cut(s) 48
StyD4I CCNGG 5 cut(s) 138, 567, 591, 651, 770
StyI CCWWGG 1 cut(s) 1194
TaaI ACNGT 5 cut(s) 202, 300, 323, 541, 826
TaiI ACGT 6 cut(s) 32, 153, 645, 702, 1120, 1174
TaqI TCGA 4 cut(s) 384, 435, 471, 788
TaqII GACCGA 1 cut(s) 297
TasI AATT 7 cut(s) 168, 277, 506, 597, 661, 890, 1218
TauI GCSGC 5 cut(s) 353, 362, 492, 779, 809
TfiI GAWTC 5 cut(s) 225, 251, 406, 785, 869
Tru1I TTAA 1 cut(s) 711
Tru9I TTAA 1 cut(s) 711
TscAI CASTG 2 cut(s) 332, 1218
TseFI GTSAC 1 cut(s) 1213
TseI GCWGC 3 cut(s) 1078, 1140, 1181
Tsp45I GTSAC 1 cut(s) 1213
TspDTI ATGAA 4 cut(s) 104, 194, 226, 1079
TspGWI ACGGA 3 cut(s) 162, 230, 619
TspRI CASTG 2 cut(s) 332, 1218
Tth111I GACNNNGTC 1 cut(s) 31
Van91I CCANNNNNTGG 1 cut(s) 1133
VpaK11BI GGWCC 4 cut(s) 296, 627, 649, 1067
XagI CCTNNNNNAGG 1 cut(s) 137
XapI RAATTY 4 cut(s) 277, 506, 597, 661
XcmI CCANNNNNNNNNTGG 1 cut(s) 361
XspI CTAG 3 cut(s) 479, 746, 924
ZraI GACGTC 2 cut(s) 30, 151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.