Rorug03G0266200

Domain of unknown function (DUF4283)

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
26078292 .. 26093473
15182 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0266200.1

Sequence Viewer

Length: 2271 bp
ATGATGGTTGAGGATCTAGGTGTGGAAGCGAAGGAAGCAGCGGTTCGGGAGGTTGCGAAGCTGTTGCCTCTGCCGGAGCTCCTTCAGTCTATTTCTTCCATCAAGGCCGATTACATTGCTCGCCAACAGGCAAATGATGCACAACTTAGTACAATGGTTGCCGAGCAGGTAGAACAAGCACAAGCTGGGCTGGAATCACTGTCCTTATCTCAAAAATCAATAAACCAACTCCGTGAAAACTTTGTTTCTATTGAAAAGCTGTGTCAAGAATGCCAAACTTTGATTGAAAACCATGATCAGATAAAGCTTCTCAGCAATGCAAGAAATAACTTGAATACAACCTTAAAGGATGTTGAGGGTATGATGTCAATCTCTGTTGAAGCCTCTGAGGCTCGGGCATCTTTAAGTGATGATAAAGAACTCATTAATACATATGAGAGGTTAACAGCTCTTGATGGAAAGCGGAGGTTTGCATTAGCAGCTGCAGGATCTCACAAGGAAGAGGTTGGCAGGCTAAGAGAATATTTTGAAGATGTTGATAAGACCTGGGAGACATTTGAGAAGACATTATGGAGCCACATTTCCAACTTCTATAAACTTTCCAAAGAAAGCCCGCAAACTCTGGTGCGTGCTTTAAGGGTTGTTGAAATGCAAGAAATCCTTGACTATCAACTTGCTGAAGAAGCAGCTGAGGCTGAGGGAGGCGGTGCCATGGCATCAATTGCCAATCCTCGTAGAACTTCCAAAAAAACTACCACAGCAATAGCTTCTTCGAGAAATCTGACGCAGCAGAAACTGAATGTACAAGGCAAAGGCTACAAGGACAAATGCTATGAGCAAATTAGGAAGACTGTTGAAGGACGATTCAACAAGCTACTGACAGAGCTTTGTTATGAGGATCTTAAAGCAGCACTAGAGGAAGCTCGAGCGATTGGAGAAGAGCTTGGAGATATATACGACCATGTAGCCCCTTGTTTTCCCCCCAGATATGAAATATTCCAACTCATGGTCAATCTGTATACCGAGAGATTCGTTCAAATGCTTAGATTACTCAGTGACAGGGCAAATGAAATGACGAACATAGAGATCTTAAAGGTAACTGGTTGGGTAGTTGAATACCAAGAAAATATGATTGGGCTTGGTGTTGATGAATCTCTTGCTCAAGTATGTTCTGAGAGTGGTTCCATGGATCCCCTTATGAATTCCTATGTGGAGAGAATGCAAGCTACGACAAGGAAATGGTACTTGAATATCTTGGAGGCTGATAAGGTACAGCCACCGAAGAAAACAGAAGATGGGAAGCTATATACGCCAGCTGCTGTTGATTTATTCAGGATCCTTGGAGAGCAAGTGCAAATTGTTCGCGATAATAGCACAGAGCTCATGCTTTACAGAATTGCTTTAGCAATTATCCAGGTAATGATTGATTTTCAAGCTGCTGAAAGGAAGAGACTTGAGGAACCTGCTTCAGAAGTTGGTTTGGAACCTTTATGTGCGATGATTAACAACAATCTACGCTGCTATGATCTCGCAATGGAGCTAAGTAATAGCACTTTGGAAGCTCTTCCCCAAAACTATGCTGAGCAGGTTAACTTTGAAGATACATGCAAAGGTTTCCTAGAGGTTGCAAAGGAAGCTGTGCATCAAACCGTCAGTGTTATTTTTGAAGATCCCGGAGTGCAGGATTTACTTGTGAAGCTCTATCAGAAGGAGTGGTGCGAGGGACAGGTTACTGAGTATCTTGTTGCAACGTTTGGTGATTATTTTACCGATGTAAAGATGTACATTGAAGAAAGATCATTTAGGAGATTTGTTGAGGCTTGTCTGGAGGAAACTGTGGTTGTTTATGTTGATCATCTTCTCTCACAGAAAAACTACATAAAGGAAGAGACCATTGAAAGGATGAGACTAGATGAAGAGGTTCTCATGGACTTTTTTAGGGAGTATTTAAGTGTTTCTAAAGTAGAAAACAGAGTCAGTATACTGAGTGATTTGAGAGAACTTGCTTCAGCAGAGAGCCTGGATACATTCACACTGATTTACACAAATATTCTCGAACATCAACCTGATTGTCCGCCTGAGGTCGTGGAGAAGCTTGTTGCACTGCGAGAAGGCATACCGCGAAAGGATGCCAAGGAGGTTGTACAAGAGTGCAAAGAGATATATGAGAATTCTCTCGTCAATGGAACCCCTGCCAAAGCAGGGTTTGTATTTCCAAGAGTTAAGTGCTTATCGTCTGCCAAGGCATCAATATGGCGAAAGCTAACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

756

Amino Acids

86.1

Weight (kDa)

4.86

Isoelectric Point (pI)

39.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sec6 PF06046 176 - 708 6.1e-122 Exocyst complex component Sec6
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01050
fragaria_vesca FvH4_1g24181 FvH4_1g28741 FvH4_1g29781 FvH4_2g00621 FvH4_2g04885 FvH4_2g11953 FvH4_2g11954 FvH4_2g12001 FvH4_2g12002 FvH4_2g12222 FvH4_2g12223 FvH4_2g38351 FvH4_3g04401 FvH4_3g31330 FvH4_3g33091 FvH4_4g11461 FvH4_5g27993 FvH4_5g27994 FvH4_5g28072 FvH4_5g28231 FvH4_5g28591 FvH4_5g34261 FvH4_6g18162 FvH4_6g25500 FvH4_6g25561 FvH4_6g25792 FvH4_6g27602 FvH4_6g46881
malus_domestica MD03G1019700.v1.1
prunus_persica Prupe.1G055400_v2.0.a1 Prupe.1G179200_v2.0.a1 Prupe.1G208200_v2.0.a1 Prupe.1G231200_v2.0.a1 Prupe.2G044900_v2.0.a1 Prupe.2G055100_v2.0.a1 Prupe.2G097600_v2.0.a1 Prupe.2G114200_v2.0.a1 Prupe.3G109000_v2.0.a1 Prupe.3G109300_v2.0.a1 Prupe.3G109600_v2.0.a1 Prupe.4G246900_v2.0.a1 Prupe.5G026400_v2.0.a1
pyrus_communis pycom05g17130 pycom07g06820 pycom07g18590 pycom07g22730 pycom12401g00120 pycom12401g00180 pycom420g00470
rosa_chinensis RchiOBHm_Chr1g0342591 RchiOBHm_Chr1g0342601 RchiOBHm_Chr1g0342611 RchiOBHm_Chr1g0351011 RchiOBHm_Chr2g0146151 RchiOBHm_Chr2g0171821 RchiOBHm_Chr3g0492921 RchiOBHm_Chr3g0492931 RchiOBHm_Chr4g0406871 RchiOBHm_Chr4g0426311 RchiOBHm_Chr5g0020721 RchiOBHm_Chr5g0050111 RchiOBHm_Chr5g0051681 RchiOBHm_Chr5g0053531 RchiOBHm_Chr5g0054841 RchiOBHm_Chr5g0055061 RchiOBHm_Chr5g0055071 RchiOBHm_Chr6g0248911 RchiOBHm_Chr6g0291741 RchiOBHm_Chr7g0187781 RchiOBHm_Chr7g0220081 RchiOBHm_Chr7g0224391 RchiOBHm_Chr7g0235221
rosa_laevigata RLG00000002133 RLG00000002402 RLG00000002736 RLG00000011046 RLG00000013214 RLG00000016550 RLG00000021669 RLG00000022948 RLG00000023691 RLG00000024682 RLG00000027826 RLG00000029734 RLG00000029831 RLG00000030305 RLG00000037042
rosa_multiflora Rmu_co7992532.1_g000001 Rmu_co8021462.1_g000001 Rmu_co8229237.1_g000001 Rmu_co8281571.1_g000001 Rmu_co8326451.1_g000001 Rmu_co8359553.1_g000001 Rmu_co8372117.1_g000001 Rmu_co8427177.1_g000001 Rmu_co8474063.1_g000002 Rmu_sc0000007.1_g000020 Rmu_sc0000173.1_g000002 Rmu_sc0000367.1_g000086 Rmu_sc0000367.1_g000088 Rmu_sc0000559.1_g000002 Rmu_sc0000733.1_g000014 Rmu_sc0000745.1_g000006 Rmu_sc0000791.1_g000046 Rmu_sc0000791.1_g000049 Rmu_sc0000824.1_g000010 Rmu_sc0000824.1_g000011 Rmu_sc0000834.1_g000009 Rmu_sc0000834.1_g000011 Rmu_sc0000911.1_g000020 Rmu_sc0000935.1_g000034 Rmu_sc0000935.1_g000051 Rmu_sc0000935.1_g000053 Rmu_sc0001000.1_g000005 Rmu_sc0001000.1_g000006 Rmu_sc0001150.1_g000004 Rmu_sc0001227.1_g000002 Rmu_sc0001322.1_g000018 Rmu_sc0001343.1_g000001 Rmu_sc0001356.1_g000004 Rmu_sc0001356.1_g000005 Rmu_sc0001363.1_g000007 Rmu_sc0001463.1_g000012 Rmu_sc0001484.1_g000023 Rmu_sc0001516.1_g000003 Rmu_sc0001516.1_g000005 Rmu_sc0001619.1_g000005 Rmu_sc0001648.1_g000032 Rmu_sc0001648.1_g000035 Rmu_sc0001694.1_g000008 Rmu_sc0001809.1_g000023 Rmu_sc0002093.1_g000027 Rmu_sc0002231.1_g000004 Rmu_sc0002245.1_g000001 Rmu_sc0002245.1_g000003 Rmu_sc0002354.1_g000045 Rmu_sc0002354.1_g000048 Rmu_sc0002368.1_g000014 Rmu_sc0002368.1_g000016 Rmu_sc0002368.1_g000017 Rmu_sc0002401.1_g000030 Rmu_sc0002487.1_g000012 Rmu_sc0002798.1_g000028 Rmu_sc0002923.1_g000012 Rmu_sc0002960.1_g000002 Rmu_sc0003033.1_g000072 Rmu_sc0003133.1_g000015 Rmu_sc0003168.1_g000007 Rmu_sc0003945.1_g000002 Rmu_sc0003945.1_g000004 Rmu_sc0003945.1_g000005 Rmu_sc0003979.1_g000004 Rmu_sc0004005.1_g000007 Rmu_sc0004059.1_g000018 Rmu_sc0004064.1_g000001 Rmu_sc0004083.1_g000007 Rmu_sc0004083.1_g000008 Rmu_sc0004354.1_g000033 Rmu_sc0004368.1_g000035 Rmu_sc0004483.1_g000032 Rmu_sc0004646.1_g000012 Rmu_sc0005014.1_g000006 Rmu_sc0005016.1_g000046 Rmu_sc0005016.1_g000051 Rmu_sc0005033.1_g000005 Rmu_sc0005033.1_g000007 Rmu_sc0005065.1_g000002 Rmu_sc0005065.1_g000004 Rmu_sc0005168.1_g000012 Rmu_sc0005238.1_g000001 Rmu_sc0005365.1_g000012 Rmu_sc0005631.1_g000005 Rmu_sc0005704.1_g000013 Rmu_sc0005704.1_g000014 Rmu_sc0005781.1_g000030 Rmu_sc0005789.1_g000016 Rmu_sc0006185.1_g000001 Rmu_sc0006185.1_g000002 Rmu_sc0006266.1_g000044 Rmu_sc0006561.1_g000018 Rmu_sc0006695.1_g000016 Rmu_sc0007739.1_g000022 Rmu_sc0008050.1_g000013 Rmu_sc0008169.1_g000006 Rmu_sc0008855.1_g000006 Rmu_sc0009298.1_g000002 Rmu_sc0009495.1_g000005 Rmu_sc0010608.1_g000003 Rmu_sc0010958.1_g000005 Rmu_sc0011506.1_g000001 Rmu_sc0011790.1_g000002 Rmu_sc0011790.1_g000003 Rmu_sc0012042.1_g000004 Rmu_sc0012042.1_g000005 Rmu_sc0012140.1_g000020 Rmu_sc0012726.1_g000005 Rmu_sc0012746.1_g000023 Rmu_sc0013193.1_g000002 Rmu_sc0013193.1_g000003 Rmu_sc0017997.1_g000001 Rmu_sc0021401.1_g000001 Rmu_sc0025959.1_g000001 Rmu_sc0026403.1_g000003 Rmu_sc0028616.1_g000002 Rmu_sc0029801.1_g000002 Rmu_sc0032453.1_g000001 Rmu_sc0033672.1_g000002 Rmu_sc0034553.1_g000001 Rmu_sc0036883.1_g000001 Rmu_ssc0000096.1_g000001 Rmu_ssc0000158.1_g000031 Rmu_ssc0000291.1_g000034 Rmu_ssc0000381.1_g000026 Rmu_ssc0000387.1_g000010 Rmu_ssc0000474.1_g000002 Rmu_ssc0000474.1_g000004
rosa_roxburghii Rroxscaffold_1G00020090 Rroxscaffold_1G00020100 Rroxscaffold_1G00022940 Rroxscaffold_1G00044600 Rroxscaffold_1G00054420 Rroxscaffold_1G00054430 Rroxscaffold_1G00056440 Rroxscaffold_2G00090180 Rroxscaffold_2G00101250 Rroxscaffold_2G00110600 Rroxscaffold_2G00152800 Rroxscaffold_4G00320370 Rroxscaffold_4G00320640 Rroxscaffold_4G00322420 Rroxscaffold_4G00324670 Rroxscaffold_5G00332760 Rroxscaffold_5G00345010 Rroxscaffold_5G00345020 Rroxscaffold_5G00355470 Rroxscaffold_5G00385520 Rroxscaffold_6G00394610 Rroxscaffold_6G00394700 Rroxscaffold_7G00164190 Rroxscaffold_7G00182750 Rroxscaffold_7G00183540 Rroxscaffold_7G00203520 Rroxscaffold_7G00211630
rosa_rugosa Rorug01G0041400 Rorug01G0041500 Rorug01G0065300 Rorug01G0065300 Rorug01G0069700 Rorug01G0069800 Rorug01G0070300 Rorug01G0072300 Rorug01G0072900 Rorug01G0093100 Rorug01G0147100.1 Rorug01G0196900 Rorug01G0259700 Rorug02G0162000 Rorug02G0182700 Rorug02G0212300 Rorug02G0214700 Rorug02G0229900 Rorug02G0246100 Rorug02G0257400 Rorug02G0259100 Rorug02G0341400 Rorug02G0341500 Rorug02G0341700 Rorug02G0341800 Rorug02G0355600 Rorug02G0386100 Rorug02G0386100 Rorug02G0387000 Rorug02G0387100 Rorug02G0388400 Rorug02G0388500 Rorug02G0429100 Rorug02G0429100 Rorug02G0455300 Rorug02G0634400 Rorug03G0163200 Rorug03G0198500 Rorug03G0199600 Rorug03G0204000 Rorug03G0265600 Rorug03G0266100 Rorug03G0266200 Rorug03G0280600 Rorug03G0348200 Rorug03G0349700 Rorug03G0349800 Rorug04G0020200 Rorug04G0073700 Rorug04G0215000 Rorug04G0426100 Rorug05G0064200 Rorug05G0064300 Rorug05G0265700 Rorug05G0287400 Rorug05G0287500 Rorug05G0287500 Rorug05G0405000 Rorug05G0525700 Rorug05G0525800 Rorug05G0588200 Rorug06G0038200 Rorug06G0057900 Rorug06G0058000 Rorug06G0058500 Rorug06G0058600 Rorug06G0116700 Rorug06G0159300.1 Rorug06G0159400 Rorug06G0174700 Rorug06G0375500 Rorug07G0091400 Rorug07G0094900 Rorug07G0108100 Rorug07G0140700 Rorug07G0140700 Rorug07G0207100 Rorug07G0207100 Rorug07G0207200 Rorug07G0287300
rosa_samantha Rh1AG100100 Rh1AG104500 Rh1BG150700 Rh1BG237700 Rh1BG334000 Rh1CG090000 Rh1CG100100 Rh1CG347300 Rh1DG090500 Rh1DG096100 Rh1DG107400 Rh1DG182500 Rh1DG265700 Rh1DG365200 Rh2BG256800 Rh2BG361300 Rh2BG468600 Rh2BG549800 Rh2CG270900 Rh2DG276700 Rh2DG276800 Rh2DG377700 Rh2DG477900 Rh3AG161200 Rh3BG138800 Rh3BG185700 Rh3BG269600 Rh3CG176000 Rh4AG006100 Rh4AG216700 Rh4AG355800 Rh4CG108600 Rh5AG141700 Rh5AG480000 Rh5BG014500 Rh5BG134600 Rh5BG295400 Rh5BG552900 Rh5CG058600 Rh5CG286400 Rh5CG350900 Rh5CG575800 Rh5DG004300 Rh5DG254600 Rh5DG356500 Rh6AG106500 Rh6AG191100 Rh6AG224700 Rh6BG074700 Rh6BG181400 Rh6BG352200 Rh6BG408400 Rh6BG453600 Rh6CG047400 Rh6CG172200 Rh6CG189400 Rh6CG515800 Rh6DG042900 Rh6DG163400 Rh7AG089300 Rh7AG227400 Rh7AG275600 Rh7AG375100 Rh7AG460900 Rh7AG485200 Rh7BG146100 Rh7BG354300 Rh7CG077100 Rh7CG294500 Rh7CG393800 Rh7DG041700 Rh7DG062700 Rh7DG091700 Rh7DG178900 Rh7DG192300 Rh7DG297000 Rh7DG403600 Rh7DG411800
rosa_wichuraiana Rw0G007100 Rw0G011430 Rw1G003580 Rw1G004040 Rw1G005880 Rw1G009860 Rw1G009990 Rw1G012190 Rw1G012200 Rw1G013740 Rw1G013750 Rw1G016710 Rw1G021050 Rw2G023790 Rw2G028810 Rw2G035890 Rw2G036250 Rw4G008880 Rw4G014380 Rw4G014390 Rw4G016020 Rw4G037160 Rw5G010060 Rw5G030620 Rw5G033840 Rw5G049840 Rw5G049850 Rw6G003450 Rw6G015080 Rw7G019640 Rw7G024060 Rw7G024070 Rw7G029090 Rw7G037010 Rw7G039170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 157, 1471, 1576
AccB1I GGYRCC 1 cut(s) 707
AccB7I CCANNNNNTGG 1 cut(s) 1006
AccI GTMKAC 2 cut(s) 1019, 1981
AccII CGCG 2 cut(s) 1365, 2122
AciI CCGC 6 cut(s) 41, 463, 614, 705, 2075, 2120
AclI AACGTT 1 cut(s) 1751
AclWI GGATC 8 cut(s) 21, 496, 906, 1184, 1197, 1330, 1343, 1664
AcsI RAATTY 2 cut(s) 1201, 2170
AcuI CTGAAG 4 cut(s) 68, 699, 1452, 1992
AfaI GTAC 6 cut(s) 151, 804, 1244, 1272, 1784, 2145
AfiI CCNNNNNNNGG 3 cut(s) 1006, 1899, 2202
AjnI CCWGG 3 cut(s) 545, 1413, 2019
AjuI GAANNNNNNNTTGG 2 cut(s) 1116, 1148
Alw21I GWGCWC 2 cut(s) 81, 1383
Alw26I GTCTC 4 cut(s) 545, 1444, 1883, 1900
AlwI GGATC 8 cut(s) 21, 496, 906, 1184, 1197, 1330, 1343, 1664
AlwNI CAGNNNCTG 2 cut(s) 796, 1319
Ama87I CYCGRG 2 cut(s) 393, 924
AoxI GGCC 1 cut(s) 105
ApeKI GCWGC 9 cut(s) 38, 479, 482, 686, 787, 908, 1316, 1436, 1518
ApoI RAATTY 2 cut(s) 1201, 2170
AseI ATTAAT 1 cut(s) 426
Asp700I GAANNNNTTC 2 cut(s) 1563, 1920
AsuC2I CCSGG 1 cut(s) 1674
AsuHPI GGTGA 1 cut(s) 1769
AvaI CYCGRG 2 cut(s) 393, 924
AxyI CCTNAGG 1 cut(s) 2079
BamHI GGATCC 2 cut(s) 1189, 1335
BanI GGYRCC 1 cut(s) 707
BanII GRGCYC 2 cut(s) 81, 1383
BbsI GAAGAC 2 cut(s) 569, 854
Bbv12I GWGCWC 2 cut(s) 81, 1383
BbvCI CCTCAGC 2 cut(s) 690, 696
BbvI GCAGC 9 cut(s) 50, 469, 491, 698, 799, 920, 1303, 1423, 1505
BccI CCATC 3 cut(s) 107, 449, 1289
BcgI CGANNNNNNTGC 6 cut(s) 46, 80, 98, 132, 1343, 1377
BciT130I CCWGG 3 cut(s) 547, 1415, 2021
BciVI GTATCC 1 cut(s) 2017
BclI TGATCA 2 cut(s) 295, 1852
BcnI CCSGG 1 cut(s) 1674
BcoDI GTCTC 4 cut(s) 545, 1444, 1883, 1900
BfaI CTAG 4 cut(s) 17, 914, 1619, 1910
BfmI CTRYAG 1 cut(s) 483
BfuAI ACCTGC 3 cut(s) 157, 1471, 1576
BfuI GTATCC 1 cut(s) 2017
BglI GCCNNNNNGGC 1 cut(s) 389
BglII AGATCT 1 cut(s) 1086
BisI GCNGC 9 cut(s) 39, 480, 483, 687, 788, 909, 1317, 1437, 1519
BlpI GCTNAGC 1 cut(s) 1581
BlsI GCNGC 9 cut(s) 40, 481, 484, 688, 789, 910, 1318, 1438, 1520
Bme1390I CCNGG 4 cut(s) 547, 1415, 1674, 2021
BmeT110I CYCGRG 2 cut(s) 393, 924
BmiI GGNNCC 8 cut(s) 575, 709, 1183, 1191, 1337, 1461, 1485, 2188
BmrFI CCNGG 4 cut(s) 547, 1415, 1674, 2021
BmsI GCATC 6 cut(s) 127, 407, 725, 1651, 2119, 2255
BpiI GAAGAC 2 cut(s) 569, 854
BpmI CTGGAG 1 cut(s) 1847
Bpu10I CCTNAGC 2 cut(s) 690, 696
Bpu1102I GCTNAGC 1 cut(s) 1581
BpuEI CTTGAG 2 cut(s) 1146, 1475
BpuMI CCSGG 1 cut(s) 1674
BsaBI GATNNNNATC 1 cut(s) 368
BsaI GGTCTC 1 cut(s) 1883
BsaJI CCNNGG 6 cut(s) 546, 711, 1185, 1339, 2133, 2241
BsaXI ACNNNNNCTCC 2 cut(s) 1335, 1365
Bsc4I CCNNNNNNNGG 3 cut(s) 1006, 1899, 2202
Bse1I ACTGG 1 cut(s) 1105
Bse21I CCTNAGG 1 cut(s) 2079
Bse3DI GCAATG 3 cut(s) 114, 322, 1539
Bse8I GATNNNNATC 1 cut(s) 368
BseBI CCWGG 3 cut(s) 547, 1415, 2021
BseDI CCNNGG 6 cut(s) 546, 711, 1185, 1339, 2133, 2241
BseGI GGATG 3 cut(s) 355, 1908, 2134
BseJI GATNNNNATC 1 cut(s) 368
BseLI CCNNNNNNNGG 3 cut(s) 1006, 1899, 2202
BseMI GCAATG 3 cut(s) 114, 322, 1539
BseNI ACTGG 1 cut(s) 1105
BseXI GCAGC 9 cut(s) 50, 469, 491, 698, 799, 920, 1303, 1423, 1505
BseYI CCCAGC 1 cut(s) 185
BsgI GTGCAG 1 cut(s) 1700
Bsh1236I CGCG 2 cut(s) 1365, 2122
BshFI GGCC 1 cut(s) 107
BshNI GGYRCC 1 cut(s) 707
BsiHKAI GWGCWC 2 cut(s) 81, 1383
BsiHKCI CYCGRG 2 cut(s) 393, 924
BsiSI CCGG 2 cut(s) 74, 1674
BslFI GGGAC 1 cut(s) 1737
BslI CCNNNNNNNGG 3 cut(s) 1006, 1899, 2202
BsmAI GTCTC 4 cut(s) 545, 1444, 1883, 1900
BsmFI GGGAC 1 cut(s) 1737
BsmI GAATGC 2 cut(s) 275, 1224
BsnI GGCC 1 cut(s) 107
Bso31I GGTCTC 1 cut(s) 1883
BsoBI CYCGRG 2 cut(s) 393, 924
Bsp1286I GDGCHC 2 cut(s) 81, 1383
Bsp1407I TGTACA 3 cut(s) 802, 1782, 2143
Bsp1720I GCTNAGC 1 cut(s) 1581
Bsp19I CCATGG 2 cut(s) 711, 1185
Bsp68I TCGCGA 1 cut(s) 1365
BspACI CCGC 6 cut(s) 41, 463, 614, 705, 2075, 2120
BspANI GGCC 1 cut(s) 107
BspFNI CGCG 2 cut(s) 1365, 2122
BspLI GGNNCC 8 cut(s) 575, 709, 1183, 1191, 1337, 1461, 1485, 2188
BspMAI CTGCAG 1 cut(s) 487
BspMI ACCTGC 3 cut(s) 157, 1471, 1576
BspPI GGATC 8 cut(s) 21, 496, 906, 1184, 1197, 1330, 1343, 1664
BspQI GCTCTTC 2 cut(s) 933, 1569
BspT107I GGYRCC 1 cut(s) 707
BspTNI GGTCTC 1 cut(s) 1883
BsrDI GCAATG 3 cut(s) 114, 322, 1539
BsrGI TGTACA 3 cut(s) 802, 1782, 2143
BsrI ACTGG 1 cut(s) 1105
BssECI CCNNGG 6 cut(s) 546, 711, 1185, 1339, 2133, 2241
BssNAI GTATAC 2 cut(s) 1020, 1982
BssT1I CCWWGG 5 cut(s) 711, 1185, 1339, 2133, 2241
Bst1107I GTATAC 2 cut(s) 1020, 1982
Bst2UI CCWGG 3 cut(s) 547, 1415, 2021
Bst4CI ACNGT 4 cut(s) 201, 853, 1651, 1837
Bst6I CTCTTC 6 cut(s) 495, 933, 1442, 1569, 1881, 1911
BstAPI GCANNNNNTGC 2 cut(s) 137, 722
BstAUI TGTACA 3 cut(s) 802, 1782, 2143
BstC8I GCNNGC 6 cut(s) 121, 512, 614, 630, 1224, 1314
BstDSI CCRYGG 2 cut(s) 711, 1185
BstF5I GGATG 3 cut(s) 355, 1908, 2134
BstFNI CGCG 2 cut(s) 1365, 2122
BstMAI GTCTC 4 cut(s) 545, 1444, 1883, 1900
BstNI CCWGG 3 cut(s) 547, 1415, 2021
BstNSI RCATGY 1 cut(s) 1608
BstSCI CCNGG 4 cut(s) 545, 1413, 1672, 2019
BstSFI CTRYAG 1 cut(s) 483
BstUI CGCG 2 cut(s) 1365, 2122
BstV1I GCAGC 9 cut(s) 50, 469, 491, 698, 799, 920, 1303, 1423, 1505
BstV2I GAAGAC 2 cut(s) 569, 854
BstX2I RGATCY 7 cut(s) 13, 488, 898, 1086, 1189, 1335, 1669
BstYI RGATCY 7 cut(s) 13, 488, 898, 1086, 1189, 1335, 1669
BstZ17I GTATAC 2 cut(s) 1020, 1982
Bsu36I CCTNAGG 1 cut(s) 2079
BsuI GTATCC 1 cut(s) 2017
BsuRI GGCC 1 cut(s) 107
BtgI CCRYGG 2 cut(s) 711, 1185
BtgZI GCGATG 1 cut(s) 1511
BtsCI GGATG 3 cut(s) 355, 1908, 2134
BtsI GCAGTG 1 cut(s) 2102
BtsIMutI CAGTG 5 cut(s) 197, 1060, 1660, 2033, 2102
BtuMI TCGCGA 1 cut(s) 1365
BveI ACCTGC 3 cut(s) 157, 1471, 1576
Cac8I GCNNGC 6 cut(s) 121, 512, 614, 630, 1224, 1314
CaiI CAGNNNCTG 2 cut(s) 796, 1319
CseI GACGC 1 cut(s) 793
Csp6I GTAC 6 cut(s) 150, 803, 1243, 1271, 1783, 2144
CviAII CATG 8 cut(s) 293, 712, 962, 1006, 1186, 1384, 1605, 1927
CviQI GTAC 6 cut(s) 150, 803, 1243, 1271, 1783, 2144
Eam1104I CTCTTC 6 cut(s) 495, 933, 1442, 1569, 1881, 1911
EarI CTCTTC 6 cut(s) 495, 933, 1442, 1569, 1881, 1911
EciI GGCGGA 1 cut(s) 2064
Ecl136II GAGCTC 2 cut(s) 79, 1381
Eco130I CCWWGG 5 cut(s) 711, 1185, 1339, 2133, 2241
Eco24I GRGCYC 2 cut(s) 81, 1383
Eco31I GGTCTC 1 cut(s) 1883
Eco53kI GAGCTC 2 cut(s) 79, 1381
Eco57I CTGAAG 4 cut(s) 68, 699, 1452, 1992
Eco81I CCTNAGG 1 cut(s) 2079
Eco88I CYCGRG 2 cut(s) 393, 924
EcoICRI GAGCTC 2 cut(s) 79, 1381
EcoRI GAATTC 2 cut(s) 1201, 2170
EcoRII CCWGG 3 cut(s) 545, 1413, 2019
EcoT14I CCWWGG 5 cut(s) 711, 1185, 1339, 2133, 2241
EcoT38I GRGCYC 2 cut(s) 81, 1383
ErhI CCWWGG 5 cut(s) 711, 1185, 1339, 2133, 2241
FaeI CATG 8 cut(s) 296, 715, 965, 1009, 1189, 1387, 1608, 1930
FalI AAGNNNNNCTT 2 cut(s) 645, 677
FaqI GGGAC 1 cut(s) 1737
FatI CATG 8 cut(s) 292, 711, 961, 1005, 1185, 1383, 1604, 1926
FauI CCCGC 1 cut(s) 621
FauNDI CATATG 1 cut(s) 433
FbaI TGATCA 2 cut(s) 295, 1852
FblI GTMKAC 2 cut(s) 1019, 1981
Fnu4HI GCNGC 9 cut(s) 39, 480, 483, 687, 788, 909, 1317, 1437, 1519
FokI GGATG 3 cut(s) 362, 1915, 2141
FriOI GRGCYC 2 cut(s) 81, 1383
Fsp4HI GCNGC 9 cut(s) 39, 480, 483, 687, 788, 909, 1317, 1437, 1519
FspBI CTAG 4 cut(s) 17, 914, 1619, 1910
GluI GCNGC 9 cut(s) 39, 480, 483, 687, 788, 909, 1317, 1437, 1519
GsaI CCCAGC 1 cut(s) 189
GsuI CTGGAG 1 cut(s) 1847
HaeIII GGCC 1 cut(s) 107
HapII CCGG 2 cut(s) 74, 1674
HgaI GACGC 1 cut(s) 793
Hin1II CATG 8 cut(s) 296, 715, 965, 1009, 1189, 1387, 1608, 1930
HincII GTYRAC 2 cut(s) 444, 1591
HindII GTYRAC 2 cut(s) 444, 1591
HindIII AAGCTT 2 cut(s) 305, 2093
HinfI GANTC 5 cut(s) 194, 864, 1029, 1151, 1974
HpaI GTTAAC 2 cut(s) 444, 1591
HpaII CCGG 2 cut(s) 74, 1674
HphI GGTGA 1 cut(s) 1769
Hpy166II GTNNAC 4 cut(s) 444, 1020, 1591, 1982
Hpy188I TCNGA 6 cut(s) 300, 388, 783, 1174, 1471, 1707
Hpy188III TCNNGA 8 cut(s) 47, 266, 452, 774, 1333, 1364, 1826, 2054
Hpy8I GTNNAC 4 cut(s) 444, 1020, 1591, 1982
HpyAV CCTTC 5 cut(s) 25, 92, 851, 1702, 2105
HpyCH4III ACNGT 4 cut(s) 201, 853, 1651, 1837
HpyCH4IV ACGT 1 cut(s) 1751
HpySE526I ACGT 1 cut(s) 1751
Hsp92II CATG 8 cut(s) 296, 715, 965, 1009, 1189, 1387, 1608, 1930
Ksp22I TGATCA 2 cut(s) 295, 1852
KspAI GTTAAC 2 cut(s) 444, 1591
LguI GCTCTTC 2 cut(s) 933, 1569
LmnI GCTCC 4 cut(s) 76, 84, 573, 1537
Lsp1109I GCAGC 9 cut(s) 50, 469, 491, 698, 799, 920, 1303, 1423, 1505
LweI GCATC 6 cut(s) 127, 407, 725, 1651, 2119, 2255
MaeI CTAG 4 cut(s) 17, 914, 1619, 1910
MaeII ACGT 1 cut(s) 1751
MaeIII GTNAC 3 cut(s) 1055, 1096, 1729
MfeI CAATTG 1 cut(s) 720
MflI RGATCY 7 cut(s) 13, 488, 898, 1086, 1189, 1335, 1669
MhlI GDGCHC 2 cut(s) 81, 1383
MluCI AATT 7 cut(s) 720, 840, 1201, 1356, 1395, 1407, 2170
MlyI GAGTC 1 cut(s) 1983
MmeI TCCRAC 2 cut(s) 609, 1024
MroXI GAANNNNTTC 2 cut(s) 1563, 1920
MslI CAYNNNNRTG 1 cut(s) 2251
MspA1I CMGCKG 4 cut(s) 41, 482, 689, 1316
MspI CCGG 2 cut(s) 74, 1674
MspR9I CCNGG 4 cut(s) 547, 1415, 1674, 2021
MunI CAATTG 1 cut(s) 720
Mva1269I GAATGC 2 cut(s) 275, 1224
MvaI CCWGG 3 cut(s) 547, 1415, 2021
MvnI CGCG 2 cut(s) 1365, 2122
NciI CCSGG 1 cut(s) 1674
NcoI CCATGG 2 cut(s) 711, 1185
NdeI CATATG 1 cut(s) 433
NlaIII CATG 8 cut(s) 296, 715, 965, 1009, 1189, 1387, 1608, 1930
NlaIV GGNNCC 8 cut(s) 575, 709, 1183, 1191, 1337, 1461, 1485, 2188
NmeAIII GCCGAG 1 cut(s) 187
NmuCI GTSAC 1 cut(s) 1055
NruI TCGCGA 1 cut(s) 1365
NspI RCATGY 1 cut(s) 1608
PaeR7I CTCGAG 1 cut(s) 924
PciSI GCTCTTC 2 cut(s) 933, 1569
PctI GAATGC 2 cut(s) 275, 1224
PdmI GAANNNNTTC 2 cut(s) 1563, 1920
PfeI GAWTC 4 cut(s) 194, 864, 1029, 1151
PflMI CCANNNNNTGG 1 cut(s) 1006
PfoI TCCNGGA 1 cut(s) 1672
PkrI GCNGC 9 cut(s) 40, 481, 484, 688, 789, 910, 1318, 1438, 1520
PleI GAGTC 1 cut(s) 1982
PpsI GAGTC 1 cut(s) 1982
PshBI ATTAAT 1 cut(s) 426
Psp124BI GAGCTC 2 cut(s) 81, 1383
Psp1406I AACGTT 1 cut(s) 1751
Psp6I CCWGG 3 cut(s) 545, 1413, 2019
PspFI CCCAGC 1 cut(s) 185
PspGI CCWGG 3 cut(s) 545, 1413, 2019
PspN4I GGNNCC 8 cut(s) 575, 709, 1183, 1191, 1337, 1461, 1485, 2188
PspXI VCTCGAGB 1 cut(s) 924
PstI CTGCAG 1 cut(s) 487
PstNI CAGNNNCTG 2 cut(s) 796, 1319
PsuI RGATCY 7 cut(s) 13, 488, 898, 1086, 1189, 1335, 1669
PvuII CAGCTG 3 cut(s) 482, 689, 1316
RruI TCGCGA 1 cut(s) 1365
RsaI GTAC 6 cut(s) 151, 804, 1244, 1272, 1784, 2145
RsaNI GTAC 6 cut(s) 150, 803, 1243, 1271, 1783, 2144
RseI CAYNNNNRTG 1 cut(s) 2251
SacI GAGCTC 2 cut(s) 81, 1383
SapI GCTCTTC 2 cut(s) 933, 1569
SatI GCNGC 9 cut(s) 39, 480, 483, 687, 788, 909, 1317, 1437, 1519
SchI GAGTC 1 cut(s) 1983
ScrFI CCNGG 4 cut(s) 547, 1415, 1674, 2021
SduI GDGCHC 2 cut(s) 81, 1383
SfaNI GCATC 6 cut(s) 127, 407, 725, 1651, 2119, 2255
SfcI CTRYAG 1 cut(s) 483
Sfr274I CTCGAG 1 cut(s) 924
SlaI CTCGAG 1 cut(s) 924
SmiMI CAYNNNNRTG 1 cut(s) 2251
SmlI CTYRAG 3 cut(s) 924, 1161, 1454
SmoI CTYRAG 3 cut(s) 924, 1161, 1454
Sse9I AATT 7 cut(s) 720, 840, 1201, 1356, 1395, 1407, 2170
SsiI CCGC 6 cut(s) 41, 463, 614, 705, 2075, 2120
SspI AATATT 3 cut(s) 524, 996, 2050
SspMI CTAG 4 cut(s) 17, 914, 1619, 1910
SstI GAGCTC 2 cut(s) 81, 1383
StyD4I CCNGG 4 cut(s) 545, 1413, 1672, 2019
StyI CCWWGG 5 cut(s) 711, 1185, 1339, 2133, 2241
TaaI ACNGT 4 cut(s) 201, 853, 1651, 1837
TaiI ACGT 1 cut(s) 1754
TaqI TCGA 3 cut(s) 773, 925, 2055
TasI AATT 7 cut(s) 720, 840, 1201, 1356, 1395, 1407, 2170
TatI WGTACW 4 cut(s) 149, 802, 1782, 2143
TfiI GAWTC 4 cut(s) 194, 864, 1029, 1151
TscAI CASTG 5 cut(s) 204, 1060, 1660, 2040, 2109
TseFI GTSAC 1 cut(s) 1055
TseI GCWGC 9 cut(s) 38, 479, 482, 686, 787, 908, 1316, 1436, 1518
Tsp45I GTSAC 1 cut(s) 1055
TspDTI ATGAA 5 cut(s) 1005, 1083, 1164, 1214, 1929
TspGWI ACGGA 1 cut(s) 221
TspRI CASTG 5 cut(s) 204, 1060, 1660, 2040, 2109
Van91I CCANNNNNTGG 1 cut(s) 1006
VspI ATTAAT 1 cut(s) 426
XapI RAATTY 2 cut(s) 1201, 2170
XceI RCATGY 1 cut(s) 1608
XhoI CTCGAG 1 cut(s) 924
XmiI GTMKAC 2 cut(s) 1019, 1981
XmnI GAANNNNTTC 2 cut(s) 1563, 1920
XspI CTAG 4 cut(s) 17, 914, 1619, 1910
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.