Rorug06G0174700

Plant self-incompatibility protein S1

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
27261192 .. 27264845
3654 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0174700.1

Sequence Viewer

Length: 2028 bp
ATGTGGGATTCAGAGACTGAGTCTGTTGGAGGCAGAGATTATGGCAATGGAGTTCTTGGTTTAAGCAAGCAGAGTGTTAAGACTGATGGGTTTGAGCTAAAAGGCAATTCTTGGTATGTTGCAACTGATATCTCAAGTGACCTGTTGGTTCAAGTTGGACAAGTCAATTTTCACTTGCATAAGTATCCCCTGCTGTCAAGGAGTGGAAAGATCAACAGAATCATGTATGAATTACGAGACCCGGACTTGAGTAAGATTGTTTTGGATGACCTTCCTGGTGGACCCAAGGCTTTTGAGCTAGCTGCAAAGTTCTGCTATGGAATTGCTGTTGATCTTACAGCAGCCAATATATCAGGCCTTAGATGTGCTGCAGAGTTCCTTGAAATGACAGAAGACTTGGAAGAAGGCAATCTTATTTTCAAAACCGAAGCATTTCTCAGCTATGTGGTTTTGTCGTCGTGGAGAGACTCCATAGTGGTGTTGAAAAGTTGTGAGAAGCTCTCACCATGGGCTGAAAACCTCCAAATTGTTCGAAGATGTAGCGAGTCCATTGCTTGGAAAGCTTGTGCCAATCCAAAAGGGATACGATGGGCATACACTGGTAAGCCTCCAAAAGTTTCAAGCCCAACTTGGAATGACATGAAAGACTCAAGTCCAAGTAGAAACCAGCAAGTTCCTCCTGATTGGTGGTTTGAAGATGCTTCAATTCTTCGCATTGACCATTACGTCAGGGTTATTACTGCTATTAAGGTAAAGGGGATGAGATTTGAACTGATTGGAGCTGCAATAATGCACTATGCAGCTAAATGGCTCCCTGGTATGATAACTGATGGCTCGGGGGCAGCCGATGAAGGAAGCAACGCCAGCAATAGTAATACTGGTAATAATACTGGGAGCAGATGGAAGGGTGGACTCCACCTGATTGTGGCTGGAACTAAAGATGAGCCTTCACCTGTTCAGGCCAAAGATCAACGTATGATCATTGAGAGCCTTATTAGCATAATTCCTCCGCAGAAGGATAGTGTTTCATGCAGCTTCCTTCTTCGACTTTTGAGAATGGCAAACATGTTGAAAGTAGCACCTGCACTGGTTACAGAGTTGGAAAAACGGGTGGGAATGCAGTTCGAACAGGCTACATTGGCAGATCTTCTTATTCCTTCTTACAATAAGAATGAAACTATGTATGATGTGGATCTTGTTCAGAGGCTTCTGGAGCATTTTCTCGTTCAAGAACAGACTGAAATTTCAAGTCCAAGCCAACAATCTTTTATTGAAAAACACTACGATGGAACTCAAAGGGGTACAGGCCCAAATGCTAAGATGAGGGTAGCTAGGCTTGTTGATAGTTATCTTACAGAGGTGTCAAGAGATAGAAGTCTTTCCCTAACAAAGTTTCAGGTACTGGCAGAAGCTTTGCCTGAATCTGCAAGAATATGTGATGATGGACTTTATAGAGCAATTGATTCATATCTCAAGGCCCATCCAACACTCTCTGAGCATGAAAGGAAGAGGCTCTGCAGGGTGATGGATTGCCAAAAGCTATCAATTGATGCTTGCATGCATGCTGCACAAAATGAAAGGCTCCCATTAAGAGTGGTGGTGCAAGTCCTTTTCTCTGAACAAGTGAAGATAAGCAATGCATTAGCCAACAATGCCCTTAAAGAAGCCGGAGACTCTCACTATCAGCCCATGGTTTCAAATCGGAAAACACTACTTGAAGGGACCCCACAATCCTTCCAAGAAGGATGGGCAGCAGCTAAGAAGGACATCAACACTGTAAAGTTTGAACTGGAGAGCGTAAAAGCCAAGTACCTCGAGCTCCAGAATGACATGGAAAACTTACAGCGACAGTTCGAAAAGATGTCAAAGCAGAAACACACGTCGGCATGGAGCAGCGGGTGGAAGAAACTCAGCAAACTCACTAAGACTACAACTTTTGAGAACCAGAACATTGGGCCTGAGCATCCATCAGCTGCTGCTGAACAGACAACAAAAACACCTAGGAGGTGGAGGAATTCCATTTCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

675

Amino Acids

75.69

Weight (kDa)

8.15

Isoelectric Point (pI)

48.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 228 - 519 3.5e-99 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01050
fragaria_vesca FvH4_1g24181 FvH4_1g28741 FvH4_1g29781 FvH4_2g00621 FvH4_2g04885 FvH4_2g11953 FvH4_2g11954 FvH4_2g12001 FvH4_2g12002 FvH4_2g12222 FvH4_2g12223 FvH4_2g38351 FvH4_3g04401 FvH4_3g31330 FvH4_3g33091 FvH4_4g11461 FvH4_5g27993 FvH4_5g27994 FvH4_5g28072 FvH4_5g28231 FvH4_5g28591 FvH4_5g34261 FvH4_6g18162 FvH4_6g25500 FvH4_6g25561 FvH4_6g25792 FvH4_6g27602 FvH4_6g46881
malus_domestica MD03G1019700.v1.1
prunus_persica Prupe.1G055400_v2.0.a1 Prupe.1G179200_v2.0.a1 Prupe.1G208200_v2.0.a1 Prupe.1G231200_v2.0.a1 Prupe.2G044900_v2.0.a1 Prupe.2G055100_v2.0.a1 Prupe.2G097600_v2.0.a1 Prupe.2G114200_v2.0.a1 Prupe.3G109000_v2.0.a1 Prupe.3G109300_v2.0.a1 Prupe.3G109600_v2.0.a1 Prupe.4G246900_v2.0.a1 Prupe.5G026400_v2.0.a1
pyrus_communis pycom05g17130 pycom07g06820 pycom07g18590 pycom07g22730 pycom12401g00120 pycom12401g00180 pycom420g00470
rosa_chinensis RchiOBHm_Chr1g0342591 RchiOBHm_Chr1g0342601 RchiOBHm_Chr1g0342611 RchiOBHm_Chr1g0351011 RchiOBHm_Chr2g0146151 RchiOBHm_Chr2g0171821 RchiOBHm_Chr3g0492921 RchiOBHm_Chr3g0492931 RchiOBHm_Chr4g0406871 RchiOBHm_Chr4g0426311 RchiOBHm_Chr5g0020721 RchiOBHm_Chr5g0050111 RchiOBHm_Chr5g0051681 RchiOBHm_Chr5g0053531 RchiOBHm_Chr5g0054841 RchiOBHm_Chr5g0055061 RchiOBHm_Chr5g0055071 RchiOBHm_Chr6g0248911 RchiOBHm_Chr6g0291741 RchiOBHm_Chr7g0187781 RchiOBHm_Chr7g0220081 RchiOBHm_Chr7g0224391 RchiOBHm_Chr7g0235221
rosa_laevigata RLG00000002133 RLG00000002402 RLG00000002736 RLG00000011046 RLG00000013214 RLG00000016550 RLG00000021669 RLG00000022948 RLG00000023691 RLG00000024682 RLG00000027826 RLG00000029734 RLG00000029831 RLG00000030305 RLG00000037042
rosa_multiflora Rmu_co7992532.1_g000001 Rmu_co8021462.1_g000001 Rmu_co8229237.1_g000001 Rmu_co8281571.1_g000001 Rmu_co8326451.1_g000001 Rmu_co8359553.1_g000001 Rmu_co8372117.1_g000001 Rmu_co8427177.1_g000001 Rmu_co8474063.1_g000002 Rmu_sc0000007.1_g000020 Rmu_sc0000173.1_g000002 Rmu_sc0000367.1_g000086 Rmu_sc0000367.1_g000088 Rmu_sc0000559.1_g000002 Rmu_sc0000733.1_g000014 Rmu_sc0000745.1_g000006 Rmu_sc0000791.1_g000046 Rmu_sc0000791.1_g000049 Rmu_sc0000824.1_g000010 Rmu_sc0000824.1_g000011 Rmu_sc0000834.1_g000009 Rmu_sc0000834.1_g000011 Rmu_sc0000911.1_g000020 Rmu_sc0000935.1_g000034 Rmu_sc0000935.1_g000051 Rmu_sc0000935.1_g000053 Rmu_sc0001000.1_g000005 Rmu_sc0001000.1_g000006 Rmu_sc0001150.1_g000004 Rmu_sc0001227.1_g000002 Rmu_sc0001322.1_g000018 Rmu_sc0001343.1_g000001 Rmu_sc0001356.1_g000004 Rmu_sc0001356.1_g000005 Rmu_sc0001363.1_g000007 Rmu_sc0001463.1_g000012 Rmu_sc0001484.1_g000023 Rmu_sc0001516.1_g000003 Rmu_sc0001516.1_g000005 Rmu_sc0001619.1_g000005 Rmu_sc0001648.1_g000032 Rmu_sc0001648.1_g000035 Rmu_sc0001694.1_g000008 Rmu_sc0001809.1_g000023 Rmu_sc0002093.1_g000027 Rmu_sc0002231.1_g000004 Rmu_sc0002245.1_g000001 Rmu_sc0002245.1_g000003 Rmu_sc0002354.1_g000045 Rmu_sc0002354.1_g000048 Rmu_sc0002368.1_g000014 Rmu_sc0002368.1_g000016 Rmu_sc0002368.1_g000017 Rmu_sc0002401.1_g000030 Rmu_sc0002487.1_g000012 Rmu_sc0002798.1_g000028 Rmu_sc0002923.1_g000012 Rmu_sc0002960.1_g000002 Rmu_sc0003033.1_g000072 Rmu_sc0003133.1_g000015 Rmu_sc0003168.1_g000007 Rmu_sc0003945.1_g000002 Rmu_sc0003945.1_g000004 Rmu_sc0003945.1_g000005 Rmu_sc0003979.1_g000004 Rmu_sc0004005.1_g000007 Rmu_sc0004059.1_g000018 Rmu_sc0004064.1_g000001 Rmu_sc0004083.1_g000007 Rmu_sc0004083.1_g000008 Rmu_sc0004354.1_g000033 Rmu_sc0004368.1_g000035 Rmu_sc0004483.1_g000032 Rmu_sc0004646.1_g000012 Rmu_sc0005014.1_g000006 Rmu_sc0005016.1_g000046 Rmu_sc0005016.1_g000051 Rmu_sc0005033.1_g000005 Rmu_sc0005033.1_g000007 Rmu_sc0005065.1_g000002 Rmu_sc0005065.1_g000004 Rmu_sc0005168.1_g000012 Rmu_sc0005238.1_g000001 Rmu_sc0005365.1_g000012 Rmu_sc0005631.1_g000005 Rmu_sc0005704.1_g000013 Rmu_sc0005704.1_g000014 Rmu_sc0005781.1_g000030 Rmu_sc0005789.1_g000016 Rmu_sc0006185.1_g000001 Rmu_sc0006185.1_g000002 Rmu_sc0006266.1_g000044 Rmu_sc0006561.1_g000018 Rmu_sc0006695.1_g000016 Rmu_sc0007739.1_g000022 Rmu_sc0008050.1_g000013 Rmu_sc0008169.1_g000006 Rmu_sc0008855.1_g000006 Rmu_sc0009298.1_g000002 Rmu_sc0009495.1_g000005 Rmu_sc0010608.1_g000003 Rmu_sc0010958.1_g000005 Rmu_sc0011506.1_g000001 Rmu_sc0011790.1_g000002 Rmu_sc0011790.1_g000003 Rmu_sc0012042.1_g000004 Rmu_sc0012042.1_g000005 Rmu_sc0012140.1_g000020 Rmu_sc0012726.1_g000005 Rmu_sc0012746.1_g000023 Rmu_sc0013193.1_g000002 Rmu_sc0013193.1_g000003 Rmu_sc0017997.1_g000001 Rmu_sc0021401.1_g000001 Rmu_sc0025959.1_g000001 Rmu_sc0026403.1_g000003 Rmu_sc0028616.1_g000002 Rmu_sc0029801.1_g000002 Rmu_sc0032453.1_g000001 Rmu_sc0033672.1_g000002 Rmu_sc0034553.1_g000001 Rmu_sc0036883.1_g000001 Rmu_ssc0000096.1_g000001 Rmu_ssc0000158.1_g000031 Rmu_ssc0000291.1_g000034 Rmu_ssc0000381.1_g000026 Rmu_ssc0000387.1_g000010 Rmu_ssc0000474.1_g000002 Rmu_ssc0000474.1_g000004
rosa_roxburghii Rroxscaffold_1G00020090 Rroxscaffold_1G00020100 Rroxscaffold_1G00022940 Rroxscaffold_1G00044600 Rroxscaffold_1G00054420 Rroxscaffold_1G00054430 Rroxscaffold_1G00056440 Rroxscaffold_2G00090180 Rroxscaffold_2G00101250 Rroxscaffold_2G00110600 Rroxscaffold_2G00152800 Rroxscaffold_4G00320370 Rroxscaffold_4G00320640 Rroxscaffold_4G00322420 Rroxscaffold_4G00324670 Rroxscaffold_5G00332760 Rroxscaffold_5G00345010 Rroxscaffold_5G00345020 Rroxscaffold_5G00355470 Rroxscaffold_5G00385520 Rroxscaffold_6G00394610 Rroxscaffold_6G00394700 Rroxscaffold_7G00164190 Rroxscaffold_7G00182750 Rroxscaffold_7G00183540 Rroxscaffold_7G00203520 Rroxscaffold_7G00211630
rosa_rugosa Rorug01G0041400 Rorug01G0041500 Rorug01G0065300 Rorug01G0065300 Rorug01G0069700 Rorug01G0069800 Rorug01G0070300 Rorug01G0072300 Rorug01G0072900 Rorug01G0093100 Rorug01G0147100.1 Rorug01G0196900 Rorug01G0259700 Rorug02G0162000 Rorug02G0182700 Rorug02G0212300 Rorug02G0214700 Rorug02G0229900 Rorug02G0246100 Rorug02G0257400 Rorug02G0259100 Rorug02G0341400 Rorug02G0341500 Rorug02G0341700 Rorug02G0341800 Rorug02G0355600 Rorug02G0386100 Rorug02G0386100 Rorug02G0387000 Rorug02G0387100 Rorug02G0388400 Rorug02G0388500 Rorug02G0429100 Rorug02G0429100 Rorug02G0455300 Rorug02G0634400 Rorug03G0163200 Rorug03G0198500 Rorug03G0199600 Rorug03G0204000 Rorug03G0265600 Rorug03G0266100 Rorug03G0266200 Rorug03G0280600 Rorug03G0348200 Rorug03G0349700 Rorug03G0349800 Rorug04G0020200 Rorug04G0073700 Rorug04G0215000 Rorug04G0426100 Rorug05G0064200 Rorug05G0064300 Rorug05G0265700 Rorug05G0287400 Rorug05G0287500 Rorug05G0287500 Rorug05G0405000 Rorug05G0525700 Rorug05G0525800 Rorug05G0588200 Rorug06G0038200 Rorug06G0057900 Rorug06G0058000 Rorug06G0058500 Rorug06G0058600 Rorug06G0116700 Rorug06G0159300.1 Rorug06G0159400 Rorug06G0174700 Rorug06G0375500 Rorug07G0091400 Rorug07G0094900 Rorug07G0108100 Rorug07G0140700 Rorug07G0140700 Rorug07G0207100 Rorug07G0207100 Rorug07G0207200 Rorug07G0287300
rosa_samantha Rh1AG100100 Rh1AG104500 Rh1BG150700 Rh1BG237700 Rh1BG334000 Rh1CG090000 Rh1CG100100 Rh1CG347300 Rh1DG090500 Rh1DG096100 Rh1DG107400 Rh1DG182500 Rh1DG265700 Rh1DG365200 Rh2BG256800 Rh2BG361300 Rh2BG468600 Rh2BG549800 Rh2CG270900 Rh2DG276700 Rh2DG276800 Rh2DG377700 Rh2DG477900 Rh3AG161200 Rh3BG138800 Rh3BG185700 Rh3BG269600 Rh3CG176000 Rh4AG006100 Rh4AG216700 Rh4AG355800 Rh4CG108600 Rh5AG141700 Rh5AG480000 Rh5BG014500 Rh5BG134600 Rh5BG295400 Rh5BG552900 Rh5CG058600 Rh5CG286400 Rh5CG350900 Rh5CG575800 Rh5DG004300 Rh5DG254600 Rh5DG356500 Rh6AG106500 Rh6AG191100 Rh6AG224700 Rh6BG074700 Rh6BG181400 Rh6BG352200 Rh6BG408400 Rh6BG453600 Rh6CG047400 Rh6CG172200 Rh6CG189400 Rh6CG515800 Rh6DG042900 Rh6DG163400 Rh7AG089300 Rh7AG227400 Rh7AG275600 Rh7AG375100 Rh7AG460900 Rh7AG485200 Rh7BG146100 Rh7BG354300 Rh7CG077100 Rh7CG294500 Rh7CG393800 Rh7DG041700 Rh7DG062700 Rh7DG091700 Rh7DG178900 Rh7DG192300 Rh7DG297000 Rh7DG403600 Rh7DG411800
rosa_wichuraiana Rw0G007100 Rw0G011430 Rw1G003580 Rw1G004040 Rw1G005880 Rw1G009860 Rw1G009990 Rw1G012190 Rw1G012200 Rw1G013740 Rw1G013750 Rw1G016710 Rw1G021050 Rw2G023790 Rw2G028810 Rw2G035890 Rw2G036250 Rw4G008880 Rw4G014380 Rw4G014390 Rw4G016020 Rw4G037160 Rw5G010060 Rw5G030620 Rw5G033840 Rw5G049840 Rw5G049850 Rw6G003450 Rw6G015080 Rw7G019640 Rw7G024060 Rw7G024070 Rw7G029090 Rw7G037010 Rw7G039170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1090
AasI GACNNNNNNGTC 1 cut(s) 725
Acc36I ACCTGC 1 cut(s) 1090
AccB7I CCANNNNNTGG 1 cut(s) 555
AciI CCGC 2 cut(s) 1010, 1896
AclWI GGATC 1 cut(s) 1200
AcsI RAATTY 2 cut(s) 1242, 2014
AfaI GTAC 3 cut(s) 1303, 1401, 1811
AfiI CCNNNNNNNGG 2 cut(s) 555, 925
AflIII ACRYGT 2 cut(s) 1065, 1878
AjiI CACGTC 1 cut(s) 1881
AjnI CCWGG 2 cut(s) 274, 814
Alw21I GWGCWC 1 cut(s) 1821
Alw26I GTCTC 4 cut(s) 8, 231, 459, 1665
AlwI GGATC 1 cut(s) 1200
AlwNI CAGNNNCTG 3 cut(s) 17, 1402, 1976
Ama87I CYCGRG 2 cut(s) 835, 1814
AoxI GGCC 5 cut(s) 355, 960, 1306, 1476, 1955
ApoI RAATTY 2 cut(s) 1242, 2014
Asp700I GAANNNNTTC 2 cut(s) 432, 1378
AspA2I CCTAGG 1 cut(s) 2000
AspS9I GGNCC 5 cut(s) 281, 1307, 1477, 1722, 1955
AsuC2I CCSGG 1 cut(s) 242
AsuHPI GGTGA 3 cut(s) 495, 942, 1534
AsuII TTCGAA 3 cut(s) 532, 1125, 1854
AsuNHI GCTAGC 1 cut(s) 298
AvaI CYCGRG 2 cut(s) 835, 1814
AvaII GGWCC 2 cut(s) 281, 1722
AvrII CCTAGG 1 cut(s) 2000
BanII GRGCYC 1 cut(s) 1821
BbsI GAAGAC 1 cut(s) 399
Bbv12I GWGCWC 1 cut(s) 1821
BcgI CGANNNNNNTGC 2 cut(s) 533, 567
BciT130I CCWGG 2 cut(s) 276, 816
BciVI GTATCC 2 cut(s) 195, 576
BclI TGATCA 1 cut(s) 978
BcnI CCSGG 1 cut(s) 242
BcoDI GTCTC 4 cut(s) 8, 231, 459, 1665
BfaI CTAG 4 cut(s) 299, 1332, 2001, 2026
BfmI CTRYAG 2 cut(s) 369, 1516
BfuAI ACCTGC 1 cut(s) 1090
BfuI GTATCC 2 cut(s) 195, 576
BglII AGATCT 1 cut(s) 1144
BlnI CCTAGG 1 cut(s) 2000
Bme1390I CCNGG 3 cut(s) 242, 276, 816
Bme18I GGWCC 2 cut(s) 281, 1722
BmeT110I CYCGRG 2 cut(s) 835, 1814
BmgBI CACGTC 1 cut(s) 1881
BmgT120I GGNCC 5 cut(s) 281, 1307, 1477, 1722, 1955
BmiI GGNNCC 5 cut(s) 283, 812, 1583, 1723, 1724
BmrFI CCNGG 3 cut(s) 242, 276, 816
BmrI ACTGGG 1 cut(s) 900
BmsI GCATC 3 cut(s) 688, 1540, 1972
BmtI GCTAGC 1 cut(s) 302
BmuI ACTGGG 1 cut(s) 900
BoxI GACNNNNGTC 1 cut(s) 651
BpiI GAAGAC 1 cut(s) 399
BplI GAGNNNNNCTC 2 cut(s) 485, 517
BpmI CTGGAG 3 cut(s) 1232, 1805, 1811
Bpu10I CCTNAGC 1 cut(s) 1959
Bpu14I TTCGAA 3 cut(s) 532, 1125, 1854
BpuEI CTTGAG 4 cut(s) 118, 268, 634, 1457
BpuMI CCSGG 1 cut(s) 242
BsaBI GATNNNNATC 3 cut(s) 1191, 1347, 1467
BsaI GGTCTC 1 cut(s) 231
BsaJI CCNNGG 5 cut(s) 285, 506, 814, 1689, 2000
Bsc4I CCNNNNNNNGG 2 cut(s) 555, 925
Bse1I ACTGG 6 cut(s) 604, 883, 895, 1092, 1407, 1794
Bse3DI GCAATG 3 cut(s) 52, 549, 1642
Bse8I GATNNNNATC 3 cut(s) 1191, 1347, 1467
BseBI CCWGG 2 cut(s) 276, 816
BseDI CCNNGG 5 cut(s) 285, 506, 814, 1689, 2000
BseGI GGATG 5 cut(s) 271, 765, 1480, 1751, 1963
BseJI GATNNNNATC 3 cut(s) 1191, 1347, 1467
BseLI CCNNNNNNNGG 2 cut(s) 555, 925
BseMI GCAATG 3 cut(s) 52, 549, 1642
BseMII CTCAG 5 cut(s) 9, 451, 1485, 1924, 1950
BseNI ACTGG 6 cut(s) 604, 883, 895, 1092, 1407, 1794
BsgI GTGCAG 2 cut(s) 1068, 1551
BshFI GGCC 5 cut(s) 357, 962, 1308, 1478, 1957
BsiHKAI GWGCWC 1 cut(s) 1821
BsiHKCI CYCGRG 2 cut(s) 835, 1814
BsiSI CCGG 2 cut(s) 242, 1668
BslFI GGGAC 1 cut(s) 1735
BslI CCNNNNNNNGG 2 cut(s) 555, 925
BsmAI GTCTC 4 cut(s) 8, 231, 459, 1665
BsmFI GGGAC 1 cut(s) 1735
BsmI GAATGC 1 cut(s) 1122
BsnI GGCC 5 cut(s) 357, 962, 1308, 1478, 1957
Bso31I GGTCTC 1 cut(s) 231
BsoBI CYCGRG 2 cut(s) 835, 1814
Bsp119I TTCGAA 3 cut(s) 532, 1125, 1854
Bsp1286I GDGCHC 1 cut(s) 1821
Bsp143I GATC 6 cut(s) 210, 331, 967, 978, 1144, 1192
Bsp19I CCATGG 2 cut(s) 506, 1689
BspACI CCGC 2 cut(s) 1010, 1896
BspANI GGCC 5 cut(s) 357, 962, 1308, 1478, 1957
BspCNI CTCAG 5 cut(s) 10, 450, 1486, 1923, 1951
BspLI GGNNCC 5 cut(s) 283, 812, 1583, 1723, 1724
BspMAI CTGCAG 2 cut(s) 373, 1520
BspMI ACCTGC 1 cut(s) 1090
BspOI GCTAGC 1 cut(s) 302
BspPI GGATC 1 cut(s) 1200
BspT104I TTCGAA 3 cut(s) 532, 1125, 1854
BspTNI GGTCTC 1 cut(s) 231
BsrDI GCAATG 3 cut(s) 52, 549, 1642
BsrI ACTGG 6 cut(s) 604, 883, 895, 1092, 1407, 1794
BssECI CCNNGG 5 cut(s) 285, 506, 814, 1689, 2000
BssMI GATC 6 cut(s) 210, 331, 967, 978, 1144, 1192
BssT1I CCWWGG 4 cut(s) 285, 506, 1689, 2000
Bst2UI CCWGG 2 cut(s) 276, 816
Bst4CI ACNGT 2 cut(s) 1777, 1851
Bst6I CTCTTC 1 cut(s) 1502
BstBI TTCGAA 3 cut(s) 532, 1125, 1854
BstC8I GCNNGC 6 cut(s) 68, 300, 865, 1555, 1559, 1563
BstDEI CTNAG 9 cut(s) 18, 359, 437, 1317, 1494, 1758, 1910, 1923, 1959
BstDSI CCRYGG 2 cut(s) 506, 1689
BstF5I GGATG 5 cut(s) 271, 765, 1480, 1751, 1963
BstKTI GATC 6 cut(s) 213, 334, 970, 981, 1147, 1195
BstMAI GTCTC 4 cut(s) 8, 231, 459, 1665
BstMBI GATC 6 cut(s) 210, 331, 967, 978, 1144, 1192
BstMWI GCNNNNNNNGC 6 cut(s) 560, 864, 996, 1139, 1213, 1652
BstNI CCWGG 2 cut(s) 276, 816
BstNSI RCATGY 3 cut(s) 1069, 1561, 1565
BstPAI GACNNNNGTC 1 cut(s) 651
BstSCI CCNGG 3 cut(s) 240, 274, 814
BstSFI CTRYAG 2 cut(s) 369, 1516
BstV2I GAAGAC 1 cut(s) 399
BstX2I RGATCY 2 cut(s) 1144, 1192
BstXI CCANNNNNNTGG 1 cut(s) 1952
BstYI RGATCY 2 cut(s) 1144, 1192
BsuI GTATCC 2 cut(s) 195, 576
BsuRI GGCC 5 cut(s) 357, 962, 1308, 1478, 1957
BtgI CCRYGG 2 cut(s) 506, 1689
BtrI CACGTC 1 cut(s) 1881
BtsCI GGATG 5 cut(s) 271, 765, 1480, 1751, 1963
BtsIMutI CAGTG 3 cut(s) 597, 1085, 1773
BveI ACCTGC 1 cut(s) 1090
Cac8I GCNNGC 6 cut(s) 68, 300, 865, 1555, 1559, 1563
CaiI CAGNNNCTG 3 cut(s) 17, 1402, 1976
Cfr13I GGNCC 5 cut(s) 281, 1307, 1477, 1722, 1955
Csp6I GTAC 3 cut(s) 1302, 1400, 1810
CviQI GTAC 3 cut(s) 1302, 1400, 1810
DdeI CTNAG 9 cut(s) 18, 359, 437, 1317, 1494, 1758, 1910, 1923, 1959
DpnI GATC 6 cut(s) 212, 333, 969, 980, 1146, 1194
DpnII GATC 6 cut(s) 210, 331, 967, 978, 1144, 1192
DrdI GACNNNNNNGTC 1 cut(s) 725
DseDI GACNNNNNNGTC 1 cut(s) 725
Eam1104I CTCTTC 1 cut(s) 1502
EarI CTCTTC 1 cut(s) 1502
Ecl136II GAGCTC 1 cut(s) 1819
Eco130I CCWWGG 4 cut(s) 285, 506, 1689, 2000
Eco147I AGGCCT 1 cut(s) 357
Eco24I GRGCYC 1 cut(s) 1821
Eco31I GGTCTC 1 cut(s) 231
Eco32I GATATC 1 cut(s) 130
Eco47I GGWCC 2 cut(s) 281, 1722
Eco53kI GAGCTC 1 cut(s) 1819
Eco88I CYCGRG 2 cut(s) 835, 1814
EcoICRI GAGCTC 1 cut(s) 1819
EcoO109I RGGNCCY 1 cut(s) 1722
EcoRI GAATTC 1 cut(s) 2014
EcoRII CCWGG 2 cut(s) 274, 814
EcoRV GATATC 1 cut(s) 130
EcoT14I CCWWGG 4 cut(s) 285, 506, 1689, 2000
EcoT22I ATGCAT 2 cut(s) 1563, 1642
EcoT38I GRGCYC 1 cut(s) 1821
ErhI CCWWGG 4 cut(s) 285, 506, 1689, 2000
FalI AAGNNNNNCTT 4 cut(s) 396, 428, 613, 645
FaqI GGGAC 1 cut(s) 1735
FauI CCCGC 1 cut(s) 1889
FbaI TGATCA 1 cut(s) 978
FokI GGATG 5 cut(s) 278, 772, 1467, 1758, 1950
FriOI GRGCYC 1 cut(s) 1821
FspBI CTAG 4 cut(s) 299, 1332, 2001, 2026
GsuI CTGGAG 3 cut(s) 1232, 1805, 1811
HaeIII GGCC 5 cut(s) 357, 962, 1308, 1478, 1957
HapII CCGG 2 cut(s) 242, 1668
HindIII AAGCTT 2 cut(s) 561, 1410
HpaII CCGG 2 cut(s) 242, 1668
HphI GGTGA 3 cut(s) 495, 942, 1534
Hpy166II GTNNAC 2 cut(s) 281, 911
Hpy188I TCNGA 5 cut(s) 13, 1203, 1495, 1618, 1704
Hpy188III TCNNGA 5 cut(s) 680, 1211, 1229, 1365, 1822
Hpy8I GTNNAC 2 cut(s) 281, 911
Hpy99I CGWCG 2 cut(s) 460, 1885
HpyCH4III ACNGT 2 cut(s) 1777, 1851
HpyCH4IV ACGT 3 cut(s) 726, 973, 1880
HpyF10VI GCNNNNNNNGC 6 cut(s) 560, 864, 996, 1139, 1213, 1652
HpyF3I CTNAG 9 cut(s) 18, 359, 437, 1317, 1494, 1758, 1910, 1923, 1959
HpySE526I ACGT 3 cut(s) 726, 973, 1880
KflI GGGWCCC 1 cut(s) 1722
Ksp22I TGATCA 1 cut(s) 978
Kzo9I GATC 6 cut(s) 210, 331, 967, 978, 1144, 1192
LmnI GCTCC 7 cut(s) 779, 816, 894, 1213, 1587, 1824, 1890
LweI GCATC 3 cut(s) 688, 1540, 1972
MaeI CTAG 4 cut(s) 299, 1332, 2001, 2026
MaeII ACGT 3 cut(s) 726, 973, 1880
MaeIII GTNAC 2 cut(s) 137, 1090
MalI GATC 6 cut(s) 212, 333, 969, 980, 1146, 1194
MboI GATC 6 cut(s) 210, 331, 967, 978, 1144, 1192
MfeI CAATTG 2 cut(s) 1458, 1545
MflI RGATCY 2 cut(s) 1144, 1192
MhlI GDGCHC 1 cut(s) 1821
MlyI GAGTC 6 cut(s) 29, 461, 554, 641, 906, 1667
MmeI TCCRAC 4 cut(s) 7, 136, 1080, 1508
Mph1103I ATGCAT 2 cut(s) 1563, 1642
MroXI GAANNNNTTC 2 cut(s) 432, 1378
MseI TTAA 5 cut(s) 62, 78, 747, 1589, 1659
MslI CAYNNNNRTG 2 cut(s) 476, 1284
MspA1I CMGCKG 2 cut(s) 1896, 1973
MspI CCGG 2 cut(s) 242, 1668
MspR9I CCNGG 3 cut(s) 242, 276, 816
MunI CAATTG 2 cut(s) 1458, 1545
Mva1269I GAATGC 1 cut(s) 1122
MvaI CCWGG 2 cut(s) 276, 816
MwoI GCNNNNNNNGC 6 cut(s) 560, 864, 996, 1139, 1213, 1652
NciI CCSGG 1 cut(s) 242
NcoI CCATGG 2 cut(s) 506, 1689
NdeII GATC 6 cut(s) 210, 331, 967, 978, 1144, 1192
NheI GCTAGC 1 cut(s) 298
NlaIV GGNNCC 5 cut(s) 283, 812, 1583, 1723, 1724
NmuCI GTSAC 1 cut(s) 137
NsiI ATGCAT 2 cut(s) 1563, 1642
NspI RCATGY 3 cut(s) 1069, 1561, 1565
NspV TTCGAA 3 cut(s) 532, 1125, 1854
PaeI GCATGC 2 cut(s) 1561, 1565
PaeR7I CTCGAG 1 cut(s) 1814
PaqCI CACCTGC 1 cut(s) 1090
PceI AGGCCT 1 cut(s) 357
PciI ACATGT 1 cut(s) 1065
PctI GAATGC 1 cut(s) 1122
PdmI GAANNNNTTC 2 cut(s) 432, 1378
PfeI GAWTC 4 cut(s) 8, 219, 1421, 1463
PflFI GACNNNGTC 1 cut(s) 19
PflMI CCANNNNNTGG 1 cut(s) 555
PleI GAGTC 6 cut(s) 28, 461, 553, 641, 906, 1667
PpsI GAGTC 6 cut(s) 28, 461, 553, 641, 906, 1667
PpuMI RGGWCCY 1 cut(s) 1722
PscI ACATGT 1 cut(s) 1065
PshAI GACNNNNGTC 1 cut(s) 651
Psp124BI GAGCTC 1 cut(s) 1821
Psp5II RGGWCCY 1 cut(s) 1722
Psp6I CCWGG 2 cut(s) 274, 814
PspGI CCWGG 2 cut(s) 274, 814
PspN4I GGNNCC 5 cut(s) 283, 812, 1583, 1723, 1724
PspPI GGNCC 5 cut(s) 281, 1307, 1477, 1722, 1955
PspPPI RGGWCCY 1 cut(s) 1722
PspXI VCTCGAGB 1 cut(s) 1814
PstI CTGCAG 2 cut(s) 373, 1520
PstNI CAGNNNCTG 3 cut(s) 17, 1402, 1976
PsuI RGATCY 2 cut(s) 1144, 1192
PsyI GACNNNGTC 1 cut(s) 19
PvuII CAGCTG 1 cut(s) 1973
RsaI GTAC 3 cut(s) 1303, 1401, 1811
RsaNI GTAC 3 cut(s) 1302, 1400, 1810
RseI CAYNNNNRTG 2 cut(s) 476, 1284
SacI GAGCTC 1 cut(s) 1821
SaqAI TTAA 5 cut(s) 62, 78, 747, 1589, 1659
Sau3AI GATC 6 cut(s) 210, 331, 967, 978, 1144, 1192
Sau96I GGNCC 5 cut(s) 281, 1307, 1477, 1722, 1955
SchI GAGTC 6 cut(s) 29, 461, 554, 641, 906, 1667
ScrFI CCNGG 3 cut(s) 242, 276, 816
SduI GDGCHC 1 cut(s) 1821
SfaNI GCATC 3 cut(s) 688, 1540, 1972
SfcI CTRYAG 2 cut(s) 369, 1516
Sfr274I CTCGAG 1 cut(s) 1814
SfuI TTCGAA 3 cut(s) 532, 1125, 1854
SinI GGWCC 2 cut(s) 281, 1722
SlaI CTCGAG 1 cut(s) 1814
SmiMI CAYNNNNRTG 2 cut(s) 476, 1284
SmlI CTYRAG 5 cut(s) 133, 247, 649, 1472, 1814
SmoI CTYRAG 5 cut(s) 133, 247, 649, 1472, 1814
SphI GCATGC 2 cut(s) 1561, 1565
SseBI AGGCCT 1 cut(s) 357
SsiI CCGC 2 cut(s) 1010, 1896
SspMI CTAG 4 cut(s) 299, 1332, 2001, 2026
SstI GAGCTC 1 cut(s) 1821
StuI AGGCCT 1 cut(s) 357
StyD4I CCNGG 3 cut(s) 240, 274, 814
StyI CCWWGG 4 cut(s) 285, 506, 1689, 2000
TaaI ACNGT 2 cut(s) 1777, 1851
TaiI ACGT 3 cut(s) 729, 976, 1883
TaqI TCGA 5 cut(s) 532, 1045, 1125, 1815, 1854
TfiI GAWTC 4 cut(s) 8, 219, 1421, 1463
Tru1I TTAA 5 cut(s) 62, 78, 747, 1589, 1659
Tru9I TTAA 5 cut(s) 62, 78, 747, 1589, 1659
TscAI CASTG 3 cut(s) 604, 1092, 1780
TseFI GTSAC 1 cut(s) 137
Tsp45I GTSAC 1 cut(s) 137
TspDTI ATGAA 8 cut(s) 243, 656, 864, 1017, 1188, 1455, 1515, 1590
TspRI CASTG 3 cut(s) 604, 1092, 1780
Tth111I GACNNNGTC 1 cut(s) 19
Van91I CCANNNNNTGG 1 cut(s) 555
VpaK11BI GGWCC 2 cut(s) 281, 1722
XapI RAATTY 2 cut(s) 1242, 2014
XceI RCATGY 3 cut(s) 1069, 1561, 1565
XhoI CTCGAG 1 cut(s) 1814
XmaJI CCTAGG 1 cut(s) 2000
XmnI GAANNNNTTC 2 cut(s) 432, 1378
XspI CTAG 4 cut(s) 299, 1332, 2001, 2026
Zsp2I ATGCAT 2 cut(s) 1563, 1642
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.