AT2G01050

Encoded by

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0000041
Physical Location & Seq
Reverse (-)
68337 .. 69884
1548 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G01050.1

Sequence Viewer

Length: 1548 bp
ATGCTTGACGTCGGAGAAAAGGGGCGTCCACCAGGGGATCCTCCGGATAAGTTGGAGTCGTGGGCTACGAAAGTGAAGGGTAGTGCTGGGGGAGGTATCTTGAAACCAGAAGACGTGATTGATGATGAGTTTGTGAGGGAGCGGGTGGGGCTGGAGTTTCCAGATGGTGAGGACGAGGAGCCAGTTATTACCATTGGTGAGGAGGTGTTGGAAGCCATGAATGGGCTTTGGAAGAAGTGTATGATAGTGAAGGTGCTTGGGAGCCAGATTCCGATCTCGGTGTTGAATCGCAAGCTAAGGGAGCTTTGGAAACCGTCGGGAGTGATGACAGTGATGGATTTGCCCCGCCAGTTTTTCATGATTAGGTTTGAACTGGAAGAGGAGTATATGGCTGCTTTAACCGGAGGTCCATGGAGAGTTCTTGGGAACTATCTGTTGGTCCAAGACTGGTCGTCAAGGTTTGATCCGTTGAGGGATGATATTGTGACTACCCCGGTGTGGGTTAGATTATCGAATATCCCGTATAACTACTATCATCGGTGTTTACTCATGGAGATTGCTCGTGGGTTGGGTAGACCACTCAAGGTTGATATGAATACGATTAACTTTGACAAGGGTCGTTTTGCTCGAGTGTGTATTGAGGTTAACTTAGCAAAACCTTTAAAAGGGACTGTGCTAATCAATGGGGATAGATACTTCGTAGCATATGAAGGACTGTCTAAAATCTGTTCTTCGTGTGGTATTTACGGTCATTTGGTTCATTCTTGTCCAAGAAATGTGGTGGTGAAAGTTTCGGCTGGGGCAGAGACGGTTACGGATAGAGCTGTGGTGCCTGTTGGGATGGAGGGAGATGACGGGTTCACAGTGGTTCAACGCACCGCTAGACGGCCGGCGGCACCGGTGCAGAAGATGGTGTTTGCGGTGGGTGCGTCTGGTGGTAGGTCAAAACAGAGGTTAAGGGAACTCCCTAAAAATCAGGGGGTGGATCTCGCAAATCGATTTGGTGGATTGGATGGTAATGGTGATTTGCCTGATTTAAGGGAAGTTGCCATTACAGAAGGGCCAAATAAGGAAAATGAATATCATGGGAGGAATGTGGGGAAGGTTATGGGTGTCCCACTAGTTAAGGAAGCTCGGGGTTCTACGCAGATGGAGAAAGGGAAAGGCGGGAGTAAAGGTGGTTTTAAATGGAAGCGTAATGGAGGGATGAAGGCTTTGGAGCCCATTGGGCCAAAACAGAAACATGGGGCCGCAAATAAGCCTGCTAGGGGATTAATATTTGGGCCTACTAAAGATGCAAACTCAGTACCAGTTGGGGAGGATTTGTTATCCAACGGGAAGCGACTGCGTGTGGAACAAAGAGATGTTGGGAGACCAGGTGGTGTGTATTCAAGTGCGATGGGTTCGCATGCCCATGAGGCTAGTTTCGACTTGGATTCATCGTCGACTTTGTCTCAGCGGTTCCAGCGGGAGGATTTGATGTCTGAAATAGCTGTTGTGAGTCATGAAGGATCGGAAGTGGGGAATTCCAGTGAGGGAATGGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

515

Amino Acids

56.34

Weight (kDa)

8.36

Isoelectric Point (pI)

35.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 74 - 156 7.9e-20 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01050
fragaria_vesca FvH4_1g24181 FvH4_1g28741 FvH4_1g29781 FvH4_2g00621 FvH4_2g04885 FvH4_2g11953 FvH4_2g11954 FvH4_2g12001 FvH4_2g12002 FvH4_2g12222 FvH4_2g12223 FvH4_2g38351 FvH4_3g04401 FvH4_3g31330 FvH4_3g33091 FvH4_4g11461 FvH4_5g27993 FvH4_5g27994 FvH4_5g28072 FvH4_5g28231 FvH4_5g28591 FvH4_5g34261 FvH4_6g18162 FvH4_6g25500 FvH4_6g25561 FvH4_6g25792 FvH4_6g27602 FvH4_6g46881
malus_domestica MD03G1019700.v1.1
prunus_persica Prupe.1G055400_v2.0.a1 Prupe.1G179200_v2.0.a1 Prupe.1G208200_v2.0.a1 Prupe.1G231200_v2.0.a1 Prupe.2G044900_v2.0.a1 Prupe.2G055100_v2.0.a1 Prupe.2G097600_v2.0.a1 Prupe.2G114200_v2.0.a1 Prupe.3G109000_v2.0.a1 Prupe.3G109300_v2.0.a1 Prupe.3G109600_v2.0.a1 Prupe.4G246900_v2.0.a1 Prupe.5G026400_v2.0.a1
pyrus_communis pycom05g17130 pycom07g06820 pycom07g18590 pycom07g22730 pycom12401g00120 pycom12401g00180 pycom420g00470
rosa_chinensis RchiOBHm_Chr1g0342591 RchiOBHm_Chr1g0342601 RchiOBHm_Chr1g0342611 RchiOBHm_Chr1g0351011 RchiOBHm_Chr2g0146151 RchiOBHm_Chr2g0171821 RchiOBHm_Chr3g0492921 RchiOBHm_Chr3g0492931 RchiOBHm_Chr4g0406871 RchiOBHm_Chr4g0426311 RchiOBHm_Chr5g0020721 RchiOBHm_Chr5g0050111 RchiOBHm_Chr5g0051681 RchiOBHm_Chr5g0053531 RchiOBHm_Chr5g0054841 RchiOBHm_Chr5g0055061 RchiOBHm_Chr5g0055071 RchiOBHm_Chr6g0248911 RchiOBHm_Chr6g0291741 RchiOBHm_Chr7g0187781 RchiOBHm_Chr7g0220081 RchiOBHm_Chr7g0224391 RchiOBHm_Chr7g0235221
rosa_laevigata RLG00000002133 RLG00000002402 RLG00000002736 RLG00000011046 RLG00000013214 RLG00000016550 RLG00000021669 RLG00000022948 RLG00000023691 RLG00000024682 RLG00000027826 RLG00000029734 RLG00000029831 RLG00000030305 RLG00000037042
rosa_multiflora Rmu_co7992532.1_g000001 Rmu_co8021462.1_g000001 Rmu_co8229237.1_g000001 Rmu_co8281571.1_g000001 Rmu_co8326451.1_g000001 Rmu_co8359553.1_g000001 Rmu_co8372117.1_g000001 Rmu_co8427177.1_g000001 Rmu_co8474063.1_g000002 Rmu_sc0000007.1_g000020 Rmu_sc0000173.1_g000002 Rmu_sc0000367.1_g000086 Rmu_sc0000367.1_g000088 Rmu_sc0000559.1_g000002 Rmu_sc0000733.1_g000014 Rmu_sc0000745.1_g000006 Rmu_sc0000791.1_g000046 Rmu_sc0000791.1_g000049 Rmu_sc0000824.1_g000010 Rmu_sc0000824.1_g000011 Rmu_sc0000834.1_g000009 Rmu_sc0000834.1_g000011 Rmu_sc0000911.1_g000020 Rmu_sc0000935.1_g000034 Rmu_sc0000935.1_g000051 Rmu_sc0000935.1_g000053 Rmu_sc0001000.1_g000005 Rmu_sc0001000.1_g000006 Rmu_sc0001150.1_g000004 Rmu_sc0001227.1_g000002 Rmu_sc0001322.1_g000018 Rmu_sc0001343.1_g000001 Rmu_sc0001356.1_g000004 Rmu_sc0001356.1_g000005 Rmu_sc0001363.1_g000007 Rmu_sc0001463.1_g000012 Rmu_sc0001484.1_g000023 Rmu_sc0001516.1_g000003 Rmu_sc0001516.1_g000005 Rmu_sc0001619.1_g000005 Rmu_sc0001648.1_g000032 Rmu_sc0001648.1_g000035 Rmu_sc0001694.1_g000008 Rmu_sc0001809.1_g000023 Rmu_sc0002093.1_g000027 Rmu_sc0002231.1_g000004 Rmu_sc0002245.1_g000001 Rmu_sc0002245.1_g000003 Rmu_sc0002354.1_g000045 Rmu_sc0002354.1_g000048 Rmu_sc0002368.1_g000014 Rmu_sc0002368.1_g000016 Rmu_sc0002368.1_g000017 Rmu_sc0002401.1_g000030 Rmu_sc0002487.1_g000012 Rmu_sc0002798.1_g000028 Rmu_sc0002923.1_g000012 Rmu_sc0002960.1_g000002 Rmu_sc0003033.1_g000072 Rmu_sc0003133.1_g000015 Rmu_sc0003168.1_g000007 Rmu_sc0003945.1_g000002 Rmu_sc0003945.1_g000004 Rmu_sc0003945.1_g000005 Rmu_sc0003979.1_g000004 Rmu_sc0004005.1_g000007 Rmu_sc0004059.1_g000018 Rmu_sc0004064.1_g000001 Rmu_sc0004083.1_g000007 Rmu_sc0004083.1_g000008 Rmu_sc0004354.1_g000033 Rmu_sc0004368.1_g000035 Rmu_sc0004483.1_g000032 Rmu_sc0004646.1_g000012 Rmu_sc0005014.1_g000006 Rmu_sc0005016.1_g000046 Rmu_sc0005016.1_g000051 Rmu_sc0005033.1_g000005 Rmu_sc0005033.1_g000007 Rmu_sc0005065.1_g000002 Rmu_sc0005065.1_g000004 Rmu_sc0005168.1_g000012 Rmu_sc0005238.1_g000001 Rmu_sc0005365.1_g000012 Rmu_sc0005631.1_g000005 Rmu_sc0005704.1_g000013 Rmu_sc0005704.1_g000014 Rmu_sc0005781.1_g000030 Rmu_sc0005789.1_g000016 Rmu_sc0006185.1_g000001 Rmu_sc0006185.1_g000002 Rmu_sc0006266.1_g000044 Rmu_sc0006561.1_g000018 Rmu_sc0006695.1_g000016 Rmu_sc0007739.1_g000022 Rmu_sc0008050.1_g000013 Rmu_sc0008169.1_g000006 Rmu_sc0008855.1_g000006 Rmu_sc0009298.1_g000002 Rmu_sc0009495.1_g000005 Rmu_sc0010608.1_g000003 Rmu_sc0010958.1_g000005 Rmu_sc0011506.1_g000001 Rmu_sc0011790.1_g000002 Rmu_sc0011790.1_g000003 Rmu_sc0012042.1_g000004 Rmu_sc0012042.1_g000005 Rmu_sc0012140.1_g000020 Rmu_sc0012726.1_g000005 Rmu_sc0012746.1_g000023 Rmu_sc0013193.1_g000002 Rmu_sc0013193.1_g000003 Rmu_sc0017997.1_g000001 Rmu_sc0021401.1_g000001 Rmu_sc0025959.1_g000001 Rmu_sc0026403.1_g000003 Rmu_sc0028616.1_g000002 Rmu_sc0029801.1_g000002 Rmu_sc0032453.1_g000001 Rmu_sc0033672.1_g000002 Rmu_sc0034553.1_g000001 Rmu_sc0036883.1_g000001 Rmu_ssc0000096.1_g000001 Rmu_ssc0000158.1_g000031 Rmu_ssc0000291.1_g000034 Rmu_ssc0000381.1_g000026 Rmu_ssc0000387.1_g000010 Rmu_ssc0000474.1_g000002 Rmu_ssc0000474.1_g000004
rosa_roxburghii Rroxscaffold_1G00020090 Rroxscaffold_1G00020100 Rroxscaffold_1G00022940 Rroxscaffold_1G00044600 Rroxscaffold_1G00054420 Rroxscaffold_1G00054430 Rroxscaffold_1G00056440 Rroxscaffold_2G00090180 Rroxscaffold_2G00101250 Rroxscaffold_2G00110600 Rroxscaffold_2G00152800 Rroxscaffold_4G00320370 Rroxscaffold_4G00320640 Rroxscaffold_4G00322420 Rroxscaffold_4G00324670 Rroxscaffold_5G00332760 Rroxscaffold_5G00345010 Rroxscaffold_5G00345020 Rroxscaffold_5G00355470 Rroxscaffold_5G00385520 Rroxscaffold_6G00394610 Rroxscaffold_6G00394700 Rroxscaffold_7G00164190 Rroxscaffold_7G00182750 Rroxscaffold_7G00183540 Rroxscaffold_7G00203520 Rroxscaffold_7G00211630
rosa_rugosa Rorug01G0041400 Rorug01G0041500 Rorug01G0065300 Rorug01G0065300 Rorug01G0069700 Rorug01G0069800 Rorug01G0070300 Rorug01G0072300 Rorug01G0072900 Rorug01G0093100 Rorug01G0147100.1 Rorug01G0196900 Rorug01G0259700 Rorug02G0162000 Rorug02G0182700 Rorug02G0212300 Rorug02G0214700 Rorug02G0229900 Rorug02G0246100 Rorug02G0257400 Rorug02G0259100 Rorug02G0341400 Rorug02G0341500 Rorug02G0341700 Rorug02G0341800 Rorug02G0355600 Rorug02G0386100 Rorug02G0386100 Rorug02G0387000 Rorug02G0387100 Rorug02G0388400 Rorug02G0388500 Rorug02G0429100 Rorug02G0429100 Rorug02G0455300 Rorug02G0634400 Rorug03G0163200 Rorug03G0198500 Rorug03G0199600 Rorug03G0204000 Rorug03G0265600 Rorug03G0266100 Rorug03G0266200 Rorug03G0280600 Rorug03G0348200 Rorug03G0349700 Rorug03G0349800 Rorug04G0020200 Rorug04G0073700 Rorug04G0215000 Rorug04G0426100 Rorug05G0064200 Rorug05G0064300 Rorug05G0265700 Rorug05G0287400 Rorug05G0287500 Rorug05G0287500 Rorug05G0405000 Rorug05G0525700 Rorug05G0525800 Rorug05G0588200 Rorug06G0038200 Rorug06G0057900 Rorug06G0058000 Rorug06G0058500 Rorug06G0058600 Rorug06G0116700 Rorug06G0159300.1 Rorug06G0159400 Rorug06G0174700 Rorug06G0375500 Rorug07G0091400 Rorug07G0094900 Rorug07G0108100 Rorug07G0140700 Rorug07G0140700 Rorug07G0207100 Rorug07G0207100 Rorug07G0207200 Rorug07G0287300
rosa_samantha Rh1AG100100 Rh1AG104500 Rh1BG150700 Rh1BG237700 Rh1BG334000 Rh1CG090000 Rh1CG100100 Rh1CG347300 Rh1DG090500 Rh1DG096100 Rh1DG107400 Rh1DG182500 Rh1DG265700 Rh1DG365200 Rh2BG256800 Rh2BG361300 Rh2BG468600 Rh2BG549800 Rh2CG270900 Rh2DG276700 Rh2DG276800 Rh2DG377700 Rh2DG477900 Rh3AG161200 Rh3BG138800 Rh3BG185700 Rh3BG269600 Rh3CG176000 Rh4AG006100 Rh4AG216700 Rh4AG355800 Rh4CG108600 Rh5AG141700 Rh5AG480000 Rh5BG014500 Rh5BG134600 Rh5BG295400 Rh5BG552900 Rh5CG058600 Rh5CG286400 Rh5CG350900 Rh5CG575800 Rh5DG004300 Rh5DG254600 Rh5DG356500 Rh6AG106500 Rh6AG191100 Rh6AG224700 Rh6BG074700 Rh6BG181400 Rh6BG352200 Rh6BG408400 Rh6BG453600 Rh6CG047400 Rh6CG172200 Rh6CG189400 Rh6CG515800 Rh6DG042900 Rh6DG163400 Rh7AG089300 Rh7AG227400 Rh7AG275600 Rh7AG375100 Rh7AG460900 Rh7AG485200 Rh7BG146100 Rh7BG354300 Rh7CG077100 Rh7CG294500 Rh7CG393800 Rh7DG041700 Rh7DG062700 Rh7DG091700 Rh7DG178900 Rh7DG192300 Rh7DG297000 Rh7DG403600 Rh7DG411800
rosa_wichuraiana Rw0G007100 Rw0G011430 Rw1G003580 Rw1G004040 Rw1G005880 Rw1G009860 Rw1G009990 Rw1G012190 Rw1G012200 Rw1G013740 Rw1G013750 Rw1G016710 Rw1G021050 Rw2G023790 Rw2G028810 Rw2G035890 Rw2G036250 Rw4G008880 Rw4G014380 Rw4G014390 Rw4G016020 Rw4G037160 Rw5G010060 Rw5G030620 Rw5G033840 Rw5G049840 Rw5G049850 Rw6G003450 Rw6G015080 Rw7G019640 Rw7G024060 Rw7G024070 Rw7G029090 Rw7G037010 Rw7G039170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 12
AccB1I GGYRCC 2 cut(s) 829, 895
AccBSI CCGCTC 1 cut(s) 142
AccI GTMKAC 2 cut(s) 574, 1445
AccIII TCCGGA 1 cut(s) 43
AciI CCGC 9 cut(s) 142, 346, 879, 893, 920, 1167, 1251, 1459, 1468
AclWI GGATC 5 cut(s) 32, 45, 458, 993, 1519
AcoI YGGCCR 1 cut(s) 887
AcsI RAATTY 1 cut(s) 1525
AcyI GRCGYC 2 cut(s) 9, 25
AfaI GTAC 1 cut(s) 1308
AfiI CCNNNNNNNGG 7 cut(s) 222, 498, 499, 665, 885, 1268, 1471
AgeI ACCGGT 1 cut(s) 898
AgsI TTSAA 5 cut(s) 103, 286, 371, 872, 1392
AhdI GACNNNNNGTC 1 cut(s) 451
AhlI ACTAGT 1 cut(s) 1120
AjiI CACGTC 1 cut(s) 115
AjnI CCWGG 2 cut(s) 31, 1375
AjuI GAANNNNNNNTTGG 2 cut(s) 419, 451
AluBI AGCT 5 cut(s) 295, 304, 824, 1133, 1493
AluI AGCT 5 cut(s) 295, 304, 824, 1133, 1493
Alw26I GTCTC 3 cut(s) 800, 1366, 1458
AlwI GGATC 5 cut(s) 32, 45, 458, 993, 1519
Ama87I CYCGRG 2 cut(s) 627, 1134
Aor13HI TCCGGA 1 cut(s) 43
AoxI GGCC 5 cut(s) 887, 1061, 1229, 1248, 1283
ApeKI GCWGC 1 cut(s) 392
ApoI RAATTY 1 cut(s) 1525
AseI ATTAAT 1 cut(s) 1274
AsiGI ACCGGT 1 cut(s) 898
AspS9I GGNCC 6 cut(s) 407, 439, 1061, 1229, 1248, 1283
AsuC2I CCSGG 1 cut(s) 494
AsuHPI GGTGA 4 cut(s) 179, 209, 796, 1034
AvaI CYCGRG 2 cut(s) 627, 1134
AvaII GGWCC 2 cut(s) 407, 439
BamHI GGATCC 1 cut(s) 37
BanI GGYRCC 2 cut(s) 829, 895
BanII GRGCYC 1 cut(s) 1224
BauI CACGAG 1 cut(s) 561
BbsI GAAGAC 1 cut(s) 117
BbvI GCAGC 1 cut(s) 379
BccI CCATC 7 cut(s) 158, 328, 835, 904, 1007, 1144, 1393
BceAI ACGGC 1 cut(s) 902
BciT130I CCWGG 2 cut(s) 33, 1377
BcnI CCSGG 1 cut(s) 494
BcoDI GTCTC 3 cut(s) 800, 1366, 1458
BcuI ACTAGT 1 cut(s) 1120
BfaI CTAG 4 cut(s) 882, 1121, 1266, 1422
BglI GCCNNNNNGGC 2 cut(s) 1228, 1418
BisI GCNGC 3 cut(s) 393, 894, 1251
BlsI GCNGC 3 cut(s) 394, 895, 1252
Bme1390I CCNGG 3 cut(s) 33, 494, 1377
Bme18I GGWCC 2 cut(s) 407, 439
BmeRI GACNNNNNGTC 1 cut(s) 451
BmeT110I CYCGRG 2 cut(s) 627, 1134
BmgBI CACGTC 1 cut(s) 115
BmgT120I GGNCC 6 cut(s) 407, 439, 1061, 1229, 1248, 1283
BmiI GGNNCC 8 cut(s) 39, 180, 263, 831, 897, 1221, 1249, 1463
BmrFI CCNGG 3 cut(s) 33, 494, 1377
BmsI GCATC 1 cut(s) 1285
BoxI GACNNNNGTC 1 cut(s) 615
BpiI GAAGAC 1 cut(s) 117
BpmI CTGGAG 1 cut(s) 173
Bpu10I CCTNAGC 1 cut(s) 296
BpuEI CTTGAG 1 cut(s) 566
BpuMI CCSGG 1 cut(s) 494
Bsa29I ATCGAT 1 cut(s) 997
BsaBI GATNNNNATC 1 cut(s) 272
BsaHI GRCGYC 2 cut(s) 9, 25
BsaI GGTCTC 1 cut(s) 1366
BsaJI CCNNGG 3 cut(s) 32, 410, 492
BsaWI WCCGGW 3 cut(s) 43, 401, 898
BsaXI ACNNNNNCTCC 6 cut(s) 1162, 1192, 1310, 1340, 1363, 1393
Bsc4I CCNNNNNNNGG 7 cut(s) 222, 498, 499, 665, 885, 1268, 1471
Bse118I RCCGGY 2 cut(s) 889, 898
Bse1I ACTGG 6 cut(s) 182, 349, 378, 452, 1310, 1530
Bse8I GATNNNNATC 1 cut(s) 272
BseAI TCCGGA 1 cut(s) 43
BseBI CCWGG 2 cut(s) 33, 1377
BseCI ATCGAT 1 cut(s) 997
BseDI CCNNGG 3 cut(s) 32, 410, 492
BseGI GGATG 4 cut(s) 481, 846, 1018, 1212
BseJI GATNNNNATC 1 cut(s) 272
BseLI CCNNNNNNNGG 7 cut(s) 222, 498, 499, 665, 885, 1268, 1471
BseMII CTCAG 2 cut(s) 1317, 1469
BseNI ACTGG 6 cut(s) 182, 349, 378, 452, 1310, 1530
BseRI GAGGAG 3 cut(s) 191, 215, 395
BseX3I CGGCCG 1 cut(s) 887
BseXI GCAGC 1 cut(s) 379
BseYI CCCAGC 2 cut(s) 86, 797
BsgI GTGCAG 1 cut(s) 923
Bsh1285I CGRYCG 1 cut(s) 890
BshFI GGCC 5 cut(s) 889, 1063, 1231, 1250, 1285
BshNI GGYRCC 2 cut(s) 829, 895
BshTI ACCGGT 1 cut(s) 898
BshVI ATCGAT 1 cut(s) 997
BsiEI CGRYCG 1 cut(s) 890
BsiHKCI CYCGRG 2 cut(s) 627, 1134
BsiSI CCGG 5 cut(s) 44, 402, 494, 890, 899
BslFI GGGAC 2 cut(s) 682, 1100
BslI CCNNNNNNNGG 7 cut(s) 222, 498, 499, 665, 885, 1268, 1471
BsmAI GTCTC 3 cut(s) 800, 1366, 1458
BsmBI CGTCTC 1 cut(s) 800
BsmFI GGGAC 2 cut(s) 682, 1100
BsnI GGCC 5 cut(s) 889, 1063, 1231, 1250, 1285
Bso31I GGTCTC 1 cut(s) 1366
BsoBI CYCGRG 2 cut(s) 627, 1134
Bsp1286I GDGCHC 1 cut(s) 1224
Bsp13I TCCGGA 1 cut(s) 43
Bsp143I GATC 5 cut(s) 37, 273, 463, 985, 1511
Bsp19I CCATGG 1 cut(s) 410
BspACI CCGC 9 cut(s) 142, 346, 879, 893, 920, 1167, 1251, 1459, 1468
BspANI GGCC 5 cut(s) 889, 1063, 1231, 1250, 1285
BspCNI CTCAG 2 cut(s) 1316, 1468
BspDI ATCGAT 1 cut(s) 997
BspEI TCCGGA 1 cut(s) 43
BspHI TCATGA 2 cut(s) 357, 1504
BspLI GGNNCC 8 cut(s) 39, 180, 263, 831, 897, 1221, 1249, 1463
BspPI GGATC 5 cut(s) 32, 45, 458, 993, 1519
BspT107I GGYRCC 2 cut(s) 829, 895
BspTNI GGTCTC 1 cut(s) 1366
BsrBI CCGCTC 1 cut(s) 142
BsrFI RCCGGY 2 cut(s) 889, 898
BsrI ACTGG 6 cut(s) 182, 349, 378, 452, 1310, 1530
BssAI RCCGGY 2 cut(s) 889, 898
BssECI CCNNGG 3 cut(s) 32, 410, 492
BssMI GATC 5 cut(s) 37, 273, 463, 985, 1511
BssNI GRCGYC 2 cut(s) 9, 25
BssSI CACGAG 1 cut(s) 561
BssT1I CCWWGG 1 cut(s) 410
Bst2BI CACGAG 1 cut(s) 561
Bst2UI CCWGG 2 cut(s) 33, 1377
Bst4CI ACNGT 7 cut(s) 315, 331, 673, 717, 749, 811, 865
Bst6I CTCTTC 1 cut(s) 372
BstACI GRCGYC 2 cut(s) 9, 25
BstC8I GCNNGC 4 cut(s) 293, 891, 1263, 1410
BstDEI CTNAG 4 cut(s) 296, 649, 1303, 1455
BstDSI CCRYGG 1 cut(s) 410
BstENI CCTNNNNNAGG 1 cut(s) 663
BstF5I GGATG 4 cut(s) 481, 846, 1018, 1212
BstKTI GATC 5 cut(s) 40, 276, 466, 988, 1514
BstMAI GTCTC 3 cut(s) 800, 1366, 1458
BstMBI GATC 5 cut(s) 37, 273, 463, 985, 1511
BstMCI CGRYCG 1 cut(s) 890
BstMWI GCNNNNNNNGC 6 cut(s) 148, 301, 926, 1228, 1418, 1465
BstNI CCWGG 2 cut(s) 33, 1377
BstNSI RCATGY 1 cut(s) 1412
BstPAI GACNNNNGTC 1 cut(s) 615
BstSCI CCNGG 3 cut(s) 31, 492, 1375
BstV1I GCAGC 1 cut(s) 379
BstV2I GAAGAC 1 cut(s) 117
BstX2I RGATCY 2 cut(s) 37, 985
BstYI RGATCY 2 cut(s) 37, 985
BstZI CGGCCG 1 cut(s) 887
Bsu15I ATCGAT 1 cut(s) 997
BsuRI GGCC 5 cut(s) 889, 1063, 1231, 1250, 1285
BsuTUI ATCGAT 1 cut(s) 997
BtgI CCRYGG 1 cut(s) 410
BtgZI GCGATG 1 cut(s) 1412
BtrI CACGTC 1 cut(s) 115
BtsCI GGATG 4 cut(s) 481, 846, 1018, 1212
BtsIMutI CAGTG 3 cut(s) 336, 870, 1537
Cac8I GCNNGC 4 cut(s) 293, 891, 1263, 1410
CciI TCATGA 2 cut(s) 357, 1504
Cfr10I RCCGGY 2 cut(s) 889, 898
Cfr13I GGNCC 6 cut(s) 407, 439, 1061, 1229, 1248, 1283
ClaI ATCGAT 1 cut(s) 997
CseI GACGC 2 cut(s) 14, 918
CsiI ACCWGGT 1 cut(s) 1375
Csp6I GTAC 1 cut(s) 1307
CspAI ACCGGT 1 cut(s) 898
CspCI CAANNNNNGTGG 2 cut(s) 759, 794
CviQI GTAC 1 cut(s) 1307
DdeI CTNAG 4 cut(s) 296, 649, 1303, 1455
DpnI GATC 5 cut(s) 39, 275, 465, 987, 1513
DpnII GATC 5 cut(s) 37, 273, 463, 985, 1511
DraI TTTAAA 2 cut(s) 663, 1186
DriI GACNNNNNGTC 1 cut(s) 451
EaeI YGGCCR 1 cut(s) 887
EagI CGGCCG 1 cut(s) 887
Eam1104I CTCTTC 1 cut(s) 372
Eam1105I GACNNNNNGTC 1 cut(s) 451
EarI CTCTTC 1 cut(s) 372
EclXI CGGCCG 1 cut(s) 887
Eco130I CCWWGG 1 cut(s) 410
Eco24I GRGCYC 1 cut(s) 1224
Eco31I GGTCTC 1 cut(s) 1366
Eco47I GGWCC 2 cut(s) 407, 439
Eco52I CGGCCG 1 cut(s) 887
Eco88I CYCGRG 2 cut(s) 627, 1134
EcoNI CCTNNNNNAGG 1 cut(s) 663
EcoRI GAATTC 1 cut(s) 1525
EcoRII CCWGG 2 cut(s) 31, 1375
EcoT14I CCWWGG 1 cut(s) 410
EcoT38I GRGCYC 1 cut(s) 1224
ErhI CCWWGG 1 cut(s) 410
Esp3I CGTCTC 1 cut(s) 800
FaqI GGGAC 2 cut(s) 682, 1100
FauI CCCGC 4 cut(s) 135, 353, 1160, 1461
FauNDI CATATG 1 cut(s) 706
FblI GTMKAC 2 cut(s) 574, 1445
Fnu4HI GCNGC 3 cut(s) 393, 894, 1251
FokI GGATG 4 cut(s) 488, 853, 1025, 1219
FriOI GRGCYC 1 cut(s) 1224
Fsp4HI GCNGC 3 cut(s) 393, 894, 1251
FspBI CTAG 4 cut(s) 882, 1121, 1266, 1422
GluI GCNGC 3 cut(s) 393, 894, 1251
GsaI CCCAGC 2 cut(s) 90, 801
GsuI CTGGAG 1 cut(s) 173
HaeIII GGCC 5 cut(s) 889, 1063, 1231, 1250, 1285
HapII CCGG 5 cut(s) 44, 402, 494, 890, 899
HgaI GACGC 2 cut(s) 14, 918
Hin1I GRCGYC 2 cut(s) 9, 25
HincII GTYRAC 2 cut(s) 646, 1446
HindII GTYRAC 2 cut(s) 646, 1446
HinfI GANTC 5 cut(s) 56, 268, 286, 1436, 1501
HpaI GTTAAC 1 cut(s) 646
HpaII CCGG 5 cut(s) 44, 402, 494, 890, 899
HphI GGTGA 4 cut(s) 179, 209, 796, 1034
Hpy166II GTNNAC 6 cut(s) 29, 545, 575, 646, 861, 1446
Hpy188I TCNGA 4 cut(s) 14, 273, 1486, 1516
Hpy188III TCNNGA 6 cut(s) 44, 100, 161, 318, 358, 1505
Hpy8I GTNNAC 6 cut(s) 29, 545, 575, 646, 861, 1446
Hpy99I CGWCG 3 cut(s) 14, 319, 1447
HpyAV CCTTC 7 cut(s) 70, 244, 704, 1052, 1096, 1204, 1502
HpyCH4III ACNGT 7 cut(s) 315, 331, 673, 717, 749, 811, 865
HpyCH4IV ACGT 2 cut(s) 9, 114
HpyCH4V TGCA 2 cut(s) 904, 1298
HpyF10VI GCNNNNNNNGC 6 cut(s) 148, 301, 926, 1228, 1418, 1465
HpyF3I CTNAG 4 cut(s) 296, 649, 1303, 1455
HpySE526I ACGT 2 cut(s) 9, 114
Hsp92I GRCGYC 2 cut(s) 9, 25
Kpn2I TCCGGA 1 cut(s) 43
KroI GCCGGC 1 cut(s) 889
KroNI GCCGGC 1 cut(s) 891
KspAI GTTAAC 1 cut(s) 646
Kzo9I GATC 5 cut(s) 37, 273, 463, 985, 1511
LmnI GCTCC 5 cut(s) 139, 178, 261, 301, 1219
Lsp1109I GCAGC 1 cut(s) 379
LweI GCATC 1 cut(s) 1285
MabI ACCWGGT 1 cut(s) 1375
MaeI CTAG 4 cut(s) 882, 1121, 1266, 1422
MaeII ACGT 2 cut(s) 9, 114
MaeIII GTNAC 2 cut(s) 484, 811
MalI GATC 5 cut(s) 39, 275, 465, 987, 1513
MbiI CCGCTC 1 cut(s) 142
MboI GATC 5 cut(s) 37, 273, 463, 985, 1511
MboII GAAGA 5 cut(s) 122, 244, 389, 723, 919
MflI RGATCY 2 cut(s) 37, 985
MhlI GDGCHC 1 cut(s) 1224
MluCI AATT 1 cut(s) 1525
MlyI GAGTC 2 cut(s) 65, 1510
MmeI TCCRAC 3 cut(s) 33, 189, 1356
MroI TCCGGA 1 cut(s) 43
MroNI GCCGGC 1 cut(s) 889
MseI TTAA 9 cut(s) 398, 603, 645, 662, 956, 1037, 1125, 1185, 1274
MslI CAYNNNNRTG 1 cut(s) 1413
MspA1I CMGCKG 2 cut(s) 1459, 1468
MspI CCGG 5 cut(s) 44, 402, 494, 890, 899
MspR9I CCNGG 3 cut(s) 33, 494, 1377
MvaI CCWGG 2 cut(s) 33, 1377
MwoI GCNNNNNNNGC 6 cut(s) 148, 301, 926, 1228, 1418, 1465
NaeI GCCGGC 1 cut(s) 891
NciI CCSGG 1 cut(s) 494
NcoI CCATGG 1 cut(s) 410
NdeI CATATG 1 cut(s) 706
NdeII GATC 5 cut(s) 37, 273, 463, 985, 1511
NgoMIV GCCGGC 1 cut(s) 889
NlaIV GGNNCC 8 cut(s) 39, 180, 263, 831, 897, 1221, 1249, 1463
NmuCI GTSAC 1 cut(s) 484
NspI RCATGY 1 cut(s) 1412
PaeI GCATGC 1 cut(s) 1412
PaeR7I CTCGAG 1 cut(s) 627
PagI TCATGA 2 cut(s) 357, 1504
PcsI WCGNNNNNNNCGW 3 cut(s) 65, 518, 625
PdiI GCCGGC 1 cut(s) 891
PfeI GAWTC 3 cut(s) 268, 286, 1436
PflFI GACNNNGTC 1 cut(s) 1450
PinAI ACCGGT 1 cut(s) 898
PkrI GCNGC 3 cut(s) 394, 895, 1252
PleI GAGTC 2 cut(s) 64, 1509
PpsI GAGTC 2 cut(s) 64, 1509
PshAI GACNNNNGTC 1 cut(s) 615
PshBI ATTAAT 1 cut(s) 1274
Psp6I CCWGG 2 cut(s) 31, 1375
PspFI CCCAGC 2 cut(s) 86, 797
PspGI CCWGG 2 cut(s) 31, 1375
PspN4I GGNNCC 8 cut(s) 39, 180, 263, 831, 897, 1221, 1249, 1463
PspPI GGNCC 6 cut(s) 407, 439, 1061, 1229, 1248, 1283
PspXI VCTCGAGB 1 cut(s) 627
PsuI RGATCY 2 cut(s) 37, 985
PsyI GACNNNGTC 1 cut(s) 1450
RsaI GTAC 1 cut(s) 1308
RsaNI GTAC 1 cut(s) 1307
RseI CAYNNNNRTG 1 cut(s) 1413
SalI GTCGAC 1 cut(s) 1444
SaqAI TTAA 9 cut(s) 398, 603, 645, 662, 956, 1037, 1125, 1185, 1274
SatI GCNGC 3 cut(s) 393, 894, 1251
Sau3AI GATC 5 cut(s) 37, 273, 463, 985, 1511
Sau96I GGNCC 6 cut(s) 407, 439, 1061, 1229, 1248, 1283
SchI GAGTC 2 cut(s) 65, 1510
ScrFI CCNGG 3 cut(s) 33, 494, 1377
SduI GDGCHC 1 cut(s) 1224
SexAI ACCWGGT 1 cut(s) 1375
SfaNI GCATC 1 cut(s) 1285
Sfr274I CTCGAG 1 cut(s) 627
SgrAI CRCCGGYG 1 cut(s) 898
SinI GGWCC 2 cut(s) 407, 439
SlaI CTCGAG 1 cut(s) 627
SmiMI CAYNNNNRTG 1 cut(s) 1413
SmlI CTYRAG 2 cut(s) 581, 627
SmoI CTYRAG 2 cut(s) 581, 627
SpeI ACTAGT 1 cut(s) 1120
SphI GCATGC 1 cut(s) 1412
Sse9I AATT 1 cut(s) 1525
SsiI CCGC 9 cut(s) 142, 346, 879, 893, 920, 1167, 1251, 1459, 1468
SspI AATATT 1 cut(s) 1278
SspMI CTAG 4 cut(s) 882, 1121, 1266, 1422
StyD4I CCNGG 3 cut(s) 31, 492, 1375
StyI CCWWGG 1 cut(s) 410
TaaI ACNGT 7 cut(s) 315, 331, 673, 717, 749, 811, 865
TaiI ACGT 2 cut(s) 12, 117
TaqI TCGA 5 cut(s) 512, 628, 997, 1428, 1445
TasI AATT 1 cut(s) 1525
TauI GCSGC 2 cut(s) 896, 1253
TfiI GAWTC 3 cut(s) 268, 286, 1436
Tru1I TTAA 9 cut(s) 398, 603, 645, 662, 956, 1037, 1125, 1185, 1274
Tru9I TTAA 9 cut(s) 398, 603, 645, 662, 956, 1037, 1125, 1185, 1274
TscAI CASTG 3 cut(s) 336, 870, 1537
TseFI GTSAC 1 cut(s) 484
TseI GCWGC 1 cut(s) 392
Tsp45I GTSAC 1 cut(s) 484
TspDTI ATGAA 9 cut(s) 233, 346, 608, 723, 749, 1092, 1223, 1428, 1521
TspGWI ACGGA 2 cut(s) 456, 830
TspRI CASTG 3 cut(s) 336, 870, 1537
Tth111I GACNNNGTC 1 cut(s) 1450
VpaK11BI GGWCC 2 cut(s) 407, 439
VspI ATTAAT 1 cut(s) 1274
XagI CCTNNNNNAGG 1 cut(s) 663
XapI RAATTY 1 cut(s) 1525
XceI RCATGY 1 cut(s) 1412
XcmI CCANNNNNNNNNTGG 1 cut(s) 1537
XhoI CTCGAG 1 cut(s) 627
XmiI GTMKAC 2 cut(s) 574, 1445
XspI CTAG 4 cut(s) 882, 1121, 1266, 1422
ZraI GACGTC 1 cut(s) 10
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.