Rmu_ssc0000291.1_g000034

acid phosphatase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000291.1
OG0000041
Physical Location & Seq
Reverse (-)
158674 .. 161919
3246 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000291.1_g000034.1.cds

Sequence Viewer

Length: 2565 bp
atgttggatcttgggtttcaaggtcctaactttacttggattagtggacgtgtaaaagagaggctggacagagctttctgcaatggagattggagattggcttttcctgaaggctttgtccatcacctccctaagatgaagtctgatcattgccctatccttttgcaactttcttctaatgtgcatatggatcctaaccttaggcctttcagattccaagccatgtggttgaaacatactgattatactgagtttataaatggtgctctaaaagtttggaattcgaatgtttctgggaacgtttttagaaagaaaagaagactccttgctcggttaaatggtattcaatgcgccttggctcataacaataatccttttcttctacaacttgaagagcagttgataagagaatatgaaacaattagagaccaggaagcgatgttttggcagcaaaaatctcgtgataagtggttgaaagagggtgataataatactagtttctttcaccttactactatggttagaagaagaaggaataaagtggaggggttattggatgatgatggtgtcctctgtactgaagctaccaccttaaaaaccattgcttcaggttatttccaaaaactcttttctcactcctcatctagaatgtctaggtttgttattccttatttatttccttcccttgatgaccatgataatttatggttgaagagaggggtctccgatacggagattcaaagtgctttgtttagtattggtggattaaaatcccctggtgctgatggctttcctgcaattttttatcagaaacattggaacctttgtagtaatgaaatgattggtttggtgaaatatgatttgatccttttttctgaggctagtagcagccaggctaaagttctaaaaaagtgtcttgacttattttgtgaactttctggacaagaggtgagttttgaaaaatcagttctatattgttctcctaatgtggctaatgcaaaagctttggcaattagcagactttgtggctctactctaactacggatatgggtaagtatctggggatgccattgattcactctagaataactaaacacacttatgcctctgttgttgagaaggttcaaaacggattggcaggatggaaaagtaaggtgctgaatatggcaggtagactcacactgattcagactgtgtcttccacaattcccatctacataatgcaaactgcaaagttaccaaagtttacacgtgaaactcttgataagctgaatagagacttcctttggggtagtactgaggggcacaagaaggttcaccttactaattgggacctaatatgcagacctaaaagtgttagtggtcttggtattaaaaagacctcaatgatgaatcaagccatgctctctaaaattggctggaggttgatgcaacctggagaaggaatgtggcaggatgtcttacagatgaagtatttgaagaaagattcatgccttgaccctacttacaaaaatccatctagatgttcgagaacttggaggagcatcagttttggtgtggagttattacgaaagggtttaatttggcgggttgacgatggtcaaagaatctccttctggtttgataaatggctacattgtggccatcttgctggtcatgattcctcccctactaccatggattctcaattcaaggttagtaatacttggaaccaagatggatgggatgtgaattttcttaagagtcactttaatgctgatattgttaaccaaattctcagcattcctgatggttttttgaatagtggtcctgatatgagaatttggagtgaagcgtcaaatgggaaattttctgtcaagtcagcttaccttgcccttattaaggaggaagaattctccagttataaatggaagtgcatttggagtatttctattcctcccaaactcaaaacttttgcttggcttgtgtcccatggaaaaattttaactaatgtggagaggactaagagatgttttactaccgtgtctacttgccctatttgtcacaagtacccagaaactttaactcatctccttagggactgttctagagctatggaggtgtggaaaaaggtcatttgtttggacaagataagtcgagctcttagccttaattggtggggctggtttgcagcaaatattcactgcaatgattattgctataatggtttgcagtggaatagcatcttcatatatacatgctggtatttgtggaaatggagaaataaatcaatttttgatgaagaatttaaaatgccatttacaccttggaaagttatagtggatgccacatctgaatggcaatctgctcaaggaaaaaagaatgatgaattgaatttttctatcattgagctggagtggaagtgccaagatgatggttggttcaaactcaatgttgatggggctaggaaagcacagtcttgtcgtataggagctggtggtgttttgagagatcacaaaggaaattggatttgtagcttctgtgctagcctcggtgttggccaggtgattgaggctgaaacttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2 DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

854

Amino Acids

98.29

Weight (kDa)

9.15

Isoelectric Point (pI)

35.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01050
fragaria_vesca FvH4_1g24181 FvH4_1g28741 FvH4_1g29781 FvH4_2g00621 FvH4_2g04885 FvH4_2g11953 FvH4_2g11954 FvH4_2g12001 FvH4_2g12002 FvH4_2g12222 FvH4_2g12223 FvH4_2g38351 FvH4_3g04401 FvH4_3g31330 FvH4_3g33091 FvH4_4g11461 FvH4_5g27993 FvH4_5g27994 FvH4_5g28072 FvH4_5g28231 FvH4_5g28591 FvH4_5g34261 FvH4_6g18162 FvH4_6g25500 FvH4_6g25561 FvH4_6g25792 FvH4_6g27602 FvH4_6g46881
malus_domestica MD03G1019700.v1.1
prunus_persica Prupe.1G055400_v2.0.a1 Prupe.1G179200_v2.0.a1 Prupe.1G208200_v2.0.a1 Prupe.1G231200_v2.0.a1 Prupe.2G044900_v2.0.a1 Prupe.2G055100_v2.0.a1 Prupe.2G097600_v2.0.a1 Prupe.2G114200_v2.0.a1 Prupe.3G109000_v2.0.a1 Prupe.3G109300_v2.0.a1 Prupe.3G109600_v2.0.a1 Prupe.4G246900_v2.0.a1 Prupe.5G026400_v2.0.a1
pyrus_communis pycom05g17130 pycom07g06820 pycom07g18590 pycom07g22730 pycom12401g00120 pycom12401g00180 pycom420g00470
rosa_chinensis RchiOBHm_Chr1g0342591 RchiOBHm_Chr1g0342601 RchiOBHm_Chr1g0342611 RchiOBHm_Chr1g0351011 RchiOBHm_Chr2g0146151 RchiOBHm_Chr2g0171821 RchiOBHm_Chr3g0492921 RchiOBHm_Chr3g0492931 RchiOBHm_Chr4g0406871 RchiOBHm_Chr4g0426311 RchiOBHm_Chr5g0020721 RchiOBHm_Chr5g0050111 RchiOBHm_Chr5g0051681 RchiOBHm_Chr5g0053531 RchiOBHm_Chr5g0054841 RchiOBHm_Chr5g0055061 RchiOBHm_Chr5g0055071 RchiOBHm_Chr6g0248911 RchiOBHm_Chr6g0291741 RchiOBHm_Chr7g0187781 RchiOBHm_Chr7g0220081 RchiOBHm_Chr7g0224391 RchiOBHm_Chr7g0235221
rosa_laevigata RLG00000002133 RLG00000002402 RLG00000002736 RLG00000011046 RLG00000013214 RLG00000016550 RLG00000021669 RLG00000022948 RLG00000023691 RLG00000024682 RLG00000027826 RLG00000029734 RLG00000029831 RLG00000030305 RLG00000037042
rosa_multiflora Rmu_co7992532.1_g000001 Rmu_co8021462.1_g000001 Rmu_co8229237.1_g000001 Rmu_co8281571.1_g000001 Rmu_co8326451.1_g000001 Rmu_co8359553.1_g000001 Rmu_co8372117.1_g000001 Rmu_co8427177.1_g000001 Rmu_co8474063.1_g000002 Rmu_sc0000007.1_g000020 Rmu_sc0000173.1_g000002 Rmu_sc0000367.1_g000086 Rmu_sc0000367.1_g000088 Rmu_sc0000559.1_g000002 Rmu_sc0000733.1_g000014 Rmu_sc0000745.1_g000006 Rmu_sc0000791.1_g000046 Rmu_sc0000791.1_g000049 Rmu_sc0000824.1_g000010 Rmu_sc0000824.1_g000011 Rmu_sc0000834.1_g000009 Rmu_sc0000834.1_g000011 Rmu_sc0000911.1_g000020 Rmu_sc0000935.1_g000034 Rmu_sc0000935.1_g000051 Rmu_sc0000935.1_g000053 Rmu_sc0001000.1_g000005 Rmu_sc0001000.1_g000006 Rmu_sc0001150.1_g000004 Rmu_sc0001227.1_g000002 Rmu_sc0001322.1_g000018 Rmu_sc0001343.1_g000001 Rmu_sc0001356.1_g000004 Rmu_sc0001356.1_g000005 Rmu_sc0001363.1_g000007 Rmu_sc0001463.1_g000012 Rmu_sc0001484.1_g000023 Rmu_sc0001516.1_g000003 Rmu_sc0001516.1_g000005 Rmu_sc0001619.1_g000005 Rmu_sc0001648.1_g000032 Rmu_sc0001648.1_g000035 Rmu_sc0001694.1_g000008 Rmu_sc0001809.1_g000023 Rmu_sc0002093.1_g000027 Rmu_sc0002231.1_g000004 Rmu_sc0002245.1_g000001 Rmu_sc0002245.1_g000003 Rmu_sc0002354.1_g000045 Rmu_sc0002354.1_g000048 Rmu_sc0002368.1_g000014 Rmu_sc0002368.1_g000016 Rmu_sc0002368.1_g000017 Rmu_sc0002401.1_g000030 Rmu_sc0002487.1_g000012 Rmu_sc0002798.1_g000028 Rmu_sc0002923.1_g000012 Rmu_sc0002960.1_g000002 Rmu_sc0003033.1_g000072 Rmu_sc0003133.1_g000015 Rmu_sc0003168.1_g000007 Rmu_sc0003945.1_g000002 Rmu_sc0003945.1_g000004 Rmu_sc0003945.1_g000005 Rmu_sc0003979.1_g000004 Rmu_sc0004005.1_g000007 Rmu_sc0004059.1_g000018 Rmu_sc0004064.1_g000001 Rmu_sc0004083.1_g000007 Rmu_sc0004083.1_g000008 Rmu_sc0004354.1_g000033 Rmu_sc0004368.1_g000035 Rmu_sc0004483.1_g000032 Rmu_sc0004646.1_g000012 Rmu_sc0005014.1_g000006 Rmu_sc0005016.1_g000046 Rmu_sc0005016.1_g000051 Rmu_sc0005033.1_g000005 Rmu_sc0005033.1_g000007 Rmu_sc0005065.1_g000002 Rmu_sc0005065.1_g000004 Rmu_sc0005168.1_g000012 Rmu_sc0005238.1_g000001 Rmu_sc0005365.1_g000012 Rmu_sc0005631.1_g000005 Rmu_sc0005704.1_g000013 Rmu_sc0005704.1_g000014 Rmu_sc0005781.1_g000030 Rmu_sc0005789.1_g000016 Rmu_sc0006185.1_g000001 Rmu_sc0006185.1_g000002 Rmu_sc0006266.1_g000044 Rmu_sc0006561.1_g000018 Rmu_sc0006695.1_g000016 Rmu_sc0007739.1_g000022 Rmu_sc0008050.1_g000013 Rmu_sc0008169.1_g000006 Rmu_sc0008855.1_g000006 Rmu_sc0009298.1_g000002 Rmu_sc0009495.1_g000005 Rmu_sc0010608.1_g000003 Rmu_sc0010958.1_g000005 Rmu_sc0011506.1_g000001 Rmu_sc0011790.1_g000002 Rmu_sc0011790.1_g000003 Rmu_sc0012042.1_g000004 Rmu_sc0012042.1_g000005 Rmu_sc0012140.1_g000020 Rmu_sc0012726.1_g000005 Rmu_sc0012746.1_g000023 Rmu_sc0013193.1_g000002 Rmu_sc0013193.1_g000003 Rmu_sc0017997.1_g000001 Rmu_sc0021401.1_g000001 Rmu_sc0025959.1_g000001 Rmu_sc0026403.1_g000003 Rmu_sc0028616.1_g000002 Rmu_sc0029801.1_g000002 Rmu_sc0032453.1_g000001 Rmu_sc0033672.1_g000002 Rmu_sc0034553.1_g000001 Rmu_sc0036883.1_g000001 Rmu_ssc0000096.1_g000001 Rmu_ssc0000158.1_g000031 Rmu_ssc0000291.1_g000034 Rmu_ssc0000381.1_g000026 Rmu_ssc0000387.1_g000010 Rmu_ssc0000474.1_g000002 Rmu_ssc0000474.1_g000004
rosa_roxburghii Rroxscaffold_1G00020090 Rroxscaffold_1G00020100 Rroxscaffold_1G00022940 Rroxscaffold_1G00044600 Rroxscaffold_1G00054420 Rroxscaffold_1G00054430 Rroxscaffold_1G00056440 Rroxscaffold_2G00090180 Rroxscaffold_2G00101250 Rroxscaffold_2G00110600 Rroxscaffold_2G00152800 Rroxscaffold_4G00320370 Rroxscaffold_4G00320640 Rroxscaffold_4G00322420 Rroxscaffold_4G00324670 Rroxscaffold_5G00332760 Rroxscaffold_5G00345010 Rroxscaffold_5G00345020 Rroxscaffold_5G00355470 Rroxscaffold_5G00385520 Rroxscaffold_6G00394610 Rroxscaffold_6G00394700 Rroxscaffold_7G00164190 Rroxscaffold_7G00182750 Rroxscaffold_7G00183540 Rroxscaffold_7G00203520 Rroxscaffold_7G00211630
rosa_rugosa Rorug01G0041400 Rorug01G0041500 Rorug01G0065300 Rorug01G0065300 Rorug01G0069700 Rorug01G0069800 Rorug01G0070300 Rorug01G0072300 Rorug01G0072900 Rorug01G0093100 Rorug01G0147100.1 Rorug01G0196900 Rorug01G0259700 Rorug02G0162000 Rorug02G0182700 Rorug02G0212300 Rorug02G0214700 Rorug02G0229900 Rorug02G0246100 Rorug02G0257400 Rorug02G0259100 Rorug02G0341400 Rorug02G0341500 Rorug02G0341700 Rorug02G0341800 Rorug02G0355600 Rorug02G0386100 Rorug02G0386100 Rorug02G0387000 Rorug02G0387100 Rorug02G0388400 Rorug02G0388500 Rorug02G0429100 Rorug02G0429100 Rorug02G0455300 Rorug02G0634400 Rorug03G0163200 Rorug03G0198500 Rorug03G0199600 Rorug03G0204000 Rorug03G0265600 Rorug03G0266100 Rorug03G0266200 Rorug03G0280600 Rorug03G0348200 Rorug03G0349700 Rorug03G0349800 Rorug04G0020200 Rorug04G0073700 Rorug04G0215000 Rorug04G0426100 Rorug05G0064200 Rorug05G0064300 Rorug05G0265700 Rorug05G0287400 Rorug05G0287500 Rorug05G0287500 Rorug05G0405000 Rorug05G0525700 Rorug05G0525800 Rorug05G0588200 Rorug06G0038200 Rorug06G0057900 Rorug06G0058000 Rorug06G0058500 Rorug06G0058600 Rorug06G0116700 Rorug06G0159300.1 Rorug06G0159400 Rorug06G0174700 Rorug06G0375500 Rorug07G0091400 Rorug07G0094900 Rorug07G0108100 Rorug07G0140700 Rorug07G0140700 Rorug07G0207100 Rorug07G0207100 Rorug07G0207200 Rorug07G0287300
rosa_samantha Rh1AG100100 Rh1AG104500 Rh1BG150700 Rh1BG237700 Rh1BG334000 Rh1CG090000 Rh1CG100100 Rh1CG347300 Rh1DG090500 Rh1DG096100 Rh1DG107400 Rh1DG182500 Rh1DG265700 Rh1DG365200 Rh2BG256800 Rh2BG361300 Rh2BG468600 Rh2BG549800 Rh2CG270900 Rh2DG276700 Rh2DG276800 Rh2DG377700 Rh2DG477900 Rh3AG161200 Rh3BG138800 Rh3BG185700 Rh3BG269600 Rh3CG176000 Rh4AG006100 Rh4AG216700 Rh4AG355800 Rh4CG108600 Rh5AG141700 Rh5AG480000 Rh5BG014500 Rh5BG134600 Rh5BG295400 Rh5BG552900 Rh5CG058600 Rh5CG286400 Rh5CG350900 Rh5CG575800 Rh5DG004300 Rh5DG254600 Rh5DG356500 Rh6AG106500 Rh6AG191100 Rh6AG224700 Rh6BG074700 Rh6BG181400 Rh6BG352200 Rh6BG408400 Rh6BG453600 Rh6CG047400 Rh6CG172200 Rh6CG189400 Rh6CG515800 Rh6DG042900 Rh6DG163400 Rh7AG089300 Rh7AG227400 Rh7AG275600 Rh7AG375100 Rh7AG460900 Rh7AG485200 Rh7BG146100 Rh7BG354300 Rh7CG077100 Rh7CG294500 Rh7CG393800 Rh7DG041700 Rh7DG062700 Rh7DG091700 Rh7DG178900 Rh7DG192300 Rh7DG297000 Rh7DG403600 Rh7DG411800
rosa_wichuraiana Rw0G007100 Rw0G011430 Rw1G003580 Rw1G004040 Rw1G005880 Rw1G009860 Rw1G009990 Rw1G012190 Rw1G012200 Rw1G013740 Rw1G013750 Rw1G016710 Rw1G021050 Rw2G023790 Rw2G028810 Rw2G035890 Rw2G036250 Rw4G008880 Rw4G014380 Rw4G014390 Rw4G016020 Rw4G037160 Rw5G010060 Rw5G030620 Rw5G033840 Rw5G049840 Rw5G049850 Rw6G003450 Rw6G015080 Rw7G019640 Rw7G024060 Rw7G024070 Rw7G029090 Rw7G037010 Rw7G039170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 257, 1905
Acc36I ACCTGC 1 cut(s) 1160
AccI GTMKAC 2 cut(s) 1174, 2027
AciI CCGC 1 cut(s) 1588
AclI AACGTT 1 cut(s) 300
AclWI GGATC 4 cut(s) 15, 185, 198, 859
AcoI YGGCCR 2 cut(s) 1642, 2539
AcsI RAATTY 9 cut(s) 280, 1732, 1773, 1821, 1847, 1892, 1980, 2285, 2374
AcuI CTGAAG 3 cut(s) 129, 591, 600
AcvI CACGTG 1 cut(s) 1253
AfaI GTAC 3 cut(s) 577, 1297, 2051
AfiI CCNNNNNNNGG 2 cut(s) 1442, 1882
AflII CTTAAG 1 cut(s) 1739
AflIII ACRYGT 2 cut(s) 49, 1250
AhlI ACTAGT 1 cut(s) 494
AjiI CACGTC 1 cut(s) 50
AjnI CCWGG 5 cut(s) 429, 775, 891, 1435, 2541
Alw21I GWGCWC 2 cut(s) 268, 2143
Alw26I GTCTC 3 cut(s) 420, 727, 1272
AlwI GGATC 4 cut(s) 15, 185, 198, 859
AoxI GGCC 3 cut(s) 203, 1642, 2539
ApeKI GCWGC 3 cut(s) 448, 888, 2171
ApoI RAATTY 9 cut(s) 280, 1732, 1773, 1821, 1847, 1892, 1980, 2285, 2374
AspLEI GCGC 1 cut(s) 353
AspS9I GGNCC 3 cut(s) 23, 1333, 1808
AsuHPI GGTGA 7 cut(s) 116, 494, 497, 862, 961, 1310, 2557
AsuII TTCGAA 1 cut(s) 284
AsuNHI GCTAGC 1 cut(s) 2525
AvaII GGWCC 3 cut(s) 23, 1333, 1808
AxyI CCTNAGG 2 cut(s) 200, 2075
BaeGI GKGCMC 1 cut(s) 1308
BalI TGGCCA 2 cut(s) 1644, 2541
BamHI GGATCC 1 cut(s) 190
BanII GRGCYC 1 cut(s) 2143
BauI CACGAG 1 cut(s) 459
BbrPI CACGTG 1 cut(s) 1253
BbsI GAAGAC 2 cut(s) 325, 1191
Bbv12I GWGCWC 2 cut(s) 268, 2143
BbvI GCAGC 3 cut(s) 460, 900, 2183
BcgI CGANNNNNNTGC 2 cut(s) 440, 474
BciT130I CCWGG 5 cut(s) 431, 777, 893, 1437, 2543
BclI TGATCA 1 cut(s) 145
BcoDI GTCTC 3 cut(s) 420, 727, 1272
BcuI ACTAGT 1 cut(s) 494
BfaI CTAG 9 cut(s) 495, 645, 654, 882, 1083, 1521, 2088, 2445, 2526
BfrI CTTAAG 1 cut(s) 1739
BfuAI ACCTGC 1 cut(s) 1160
BisI GCNGC 3 cut(s) 449, 889, 2172
BlsI GCNGC 3 cut(s) 450, 890, 2173
BmcAI AGTACT 1 cut(s) 1297
Bme1390I CCNGG 5 cut(s) 431, 777, 893, 1437, 2543
Bme18I GGWCC 3 cut(s) 23, 1333, 1808
BmgBI CACGTC 1 cut(s) 50
BmgT120I GGNCC 3 cut(s) 23, 1333, 1808
BmiI GGNNCC 4 cut(s) 192, 821, 1334, 1712
BmrFI CCNGG 5 cut(s) 431, 777, 893, 1437, 2543
BmsI GCATC 5 cut(s) 1056, 1419, 1554, 2232, 2314
BmtI GCTAGC 1 cut(s) 2529
BoxI GACNNNNGTC 1 cut(s) 1599
BpiI GAAGAC 2 cut(s) 325, 1191
BpmI CTGGAG 4 cut(s) 1441, 1458, 1882, 2414
Bpu14I TTCGAA 1 cut(s) 284
BpuEI CTTGAG 1 cut(s) 2334
BsaAI YACGTR 1 cut(s) 1253
BsaBI GATNNNNATC 1 cut(s) 769
BsaI GGTCTC 2 cut(s) 420, 727
BsaJI CCNNGG 6 cut(s) 354, 775, 1677, 1972, 2306, 2530
BsaXI ACNNNNNCTCC 4 cut(s) 1534, 1564, 2387, 2417
Bsc4I CCNNNNNNNGG 2 cut(s) 1442, 1882
Bse1I ACTGG 1 cut(s) 1899
Bse21I CCTNAGG 2 cut(s) 200, 2075
Bse3DI GCAATG 4 cut(s) 88, 148, 600, 2194
Bse8I GATNNNNATC 1 cut(s) 769
BseBI CCWGG 5 cut(s) 431, 777, 893, 1437, 2543
BseDI CCNNGG 6 cut(s) 354, 775, 1677, 1972, 2306, 2530
BseGI GGATG 7 cut(s) 562, 1071, 1148, 1462, 1727, 1732, 2329
BseJI GATNNNNATC 1 cut(s) 769
BseLI CCNNNNNNNGG 2 cut(s) 1442, 1882
BseMI GCAATG 4 cut(s) 88, 148, 600, 2194
BseMII CTCAG 4 cut(s) 240, 867, 1290, 1792
BseNI ACTGG 1 cut(s) 1899
BseRI GAGGAG 2 cut(s) 628, 1555
BseSI GKGCMC 1 cut(s) 1308
BseXI GCAGC 3 cut(s) 460, 900, 2183
BshFI GGCC 3 cut(s) 205, 1644, 2541
BsiHKAI GWGCWC 2 cut(s) 268, 2143
BslFI GGGAC 3 cut(s) 1346, 1954, 2093
BslI CCNNNNNNNGG 2 cut(s) 1442, 1882
BsmAI GTCTC 3 cut(s) 420, 727, 1272
BsmFI GGGAC 3 cut(s) 1346, 1954, 2093
BsmI GAATGC 1 cut(s) 1782
BsnI GGCC 3 cut(s) 205, 1644, 2541
Bso31I GGTCTC 2 cut(s) 420, 727
Bsp119I TTCGAA 1 cut(s) 284
Bsp1286I GDGCHC 3 cut(s) 268, 1308, 2143
Bsp143I GATC 5 cut(s) 7, 145, 190, 864, 2491
Bsp19I CCATGG 2 cut(s) 1677, 1972
BspACI CCGC 1 cut(s) 1588
BspANI GGCC 3 cut(s) 205, 1644, 2541
BspCNI CTCAG 4 cut(s) 241, 868, 1291, 1791
BspHI TCATGA 1 cut(s) 1657
BspLI GGNNCC 4 cut(s) 192, 821, 1334, 1712
BspMI ACCTGC 1 cut(s) 1160
BspOI GCTAGC 1 cut(s) 2529
BspPI GGATC 4 cut(s) 15, 185, 198, 859
BspQI GCTCTTC 1 cut(s) 387
BspT104I TTCGAA 1 cut(s) 284
BspTI CTTAAG 1 cut(s) 1739
BspTNI GGTCTC 2 cut(s) 420, 727
BsrDI GCAATG 4 cut(s) 88, 148, 600, 2194
BsrI ACTGG 1 cut(s) 1899
BssECI CCNNGG 6 cut(s) 354, 775, 1677, 1972, 2306, 2530
BssMI GATC 5 cut(s) 7, 145, 190, 864, 2491
BssSI CACGAG 1 cut(s) 459
BssT1I CCWWGG 4 cut(s) 354, 1677, 1972, 2306
Bst2BI CACGAG 1 cut(s) 459
Bst2UI CCWGG 5 cut(s) 431, 777, 893, 1437, 2543
Bst4CI ACNGT 4 cut(s) 1195, 2023, 2084, 2457
Bst6I CTCTTC 2 cut(s) 387, 707
BstAFI CTTAAG 1 cut(s) 1739
BstBAI YACGTR 1 cut(s) 1253
BstBI TTCGAA 1 cut(s) 284
BstC8I GCNNGC 1 cut(s) 2527
BstDEI CTNAG 9 cut(s) 132, 200, 249, 876, 1299, 1778, 2004, 2075, 2144
BstDSI CCRYGG 2 cut(s) 1677, 1972
BstENI CCTNNNNNAGG 2 cut(s) 1440, 1880
BstF5I GGATG 7 cut(s) 562, 1071, 1148, 1462, 1727, 1732, 2329
BstHHI GCGC 1 cut(s) 353
BstKTI GATC 5 cut(s) 10, 148, 193, 867, 2494
BstMAI GTCTC 3 cut(s) 420, 727, 1272
BstMBI GATC 5 cut(s) 7, 145, 190, 864, 2491
BstMWI GCNNNNNNNGC 2 cut(s) 1871, 2450
BstNI CCWGG 5 cut(s) 431, 777, 893, 1437, 2543
BstNSI RCATGY 1 cut(s) 2241
BstPAI GACNNNNGTC 1 cut(s) 1599
BstSCI CCNGG 5 cut(s) 429, 775, 891, 1435, 2541
BstSLI GKGCMC 1 cut(s) 1308
BstV1I GCAGC 3 cut(s) 460, 900, 2183
BstV2I GAAGAC 2 cut(s) 325, 1191
BstX2I RGATCY 2 cut(s) 7, 190
BstXI CCANNNNNNTGG 2 cut(s) 1652, 2414
BstYI RGATCY 2 cut(s) 7, 190
Bsu36I CCTNAGG 2 cut(s) 200, 2075
BsuRI GGCC 3 cut(s) 205, 1644, 2541
BtgI CCRYGG 2 cut(s) 1677, 1972
BtgZI GCGATG 1 cut(s) 452
BtrI CACGTC 1 cut(s) 50
BtsCI GGATG 7 cut(s) 562, 1071, 1148, 1462, 1727, 1732, 2329
BtsI GCAGTG 2 cut(s) 2182, 2219
BtsIMutI CAGTG 3 cut(s) 1181, 2182, 2219
BveI ACCTGC 1 cut(s) 1160
Cac8I GCNNGC 1 cut(s) 2527
CciI TCATGA 1 cut(s) 1657
CfoI GCGC 1 cut(s) 353
Cfr13I GGNCC 3 cut(s) 23, 1333, 1808
CseI GACGC 1 cut(s) 1824
Csp6I GTAC 3 cut(s) 576, 1296, 2050
CspCI CAANNNNNGTGG 2 cut(s) 206, 241
CviAII CATG 8 cut(s) 223, 695, 1402, 1491, 1658, 1678, 1973, 2238
CviQI GTAC 3 cut(s) 576, 1296, 2050
DdeI CTNAG 9 cut(s) 132, 200, 249, 876, 1299, 1778, 2004, 2075, 2144
DpnI GATC 5 cut(s) 9, 147, 192, 866, 2493
DpnII GATC 5 cut(s) 7, 145, 190, 864, 2491
DraI TTTAAA 1 cut(s) 2290
EaeI YGGCCR 2 cut(s) 1642, 2539
Eam1104I CTCTTC 2 cut(s) 387, 707
EarI CTCTTC 2 cut(s) 387, 707
Ecl136II GAGCTC 1 cut(s) 2141
Eco130I CCWWGG 4 cut(s) 354, 1677, 1972, 2306
Eco147I AGGCCT 1 cut(s) 205
Eco24I GRGCYC 1 cut(s) 2143
Eco31I GGTCTC 2 cut(s) 420, 727
Eco47I GGWCC 3 cut(s) 23, 1333, 1808
Eco53kI GAGCTC 1 cut(s) 2141
Eco57I CTGAAG 3 cut(s) 129, 591, 600
Eco72I CACGTG 1 cut(s) 1253
Eco81I CCTNAGG 2 cut(s) 200, 2075
EcoICRI GAGCTC 1 cut(s) 2141
EcoNI CCTNNNNNAGG 2 cut(s) 1440, 1880
EcoO109I RGGNCCY 2 cut(s) 23, 1333
EcoRI GAATTC 2 cut(s) 280, 1892
EcoRII CCWGG 5 cut(s) 429, 775, 891, 1435, 2541
EcoT14I CCWWGG 4 cut(s) 354, 1677, 1972, 2306
EcoT38I GRGCYC 1 cut(s) 2143
ErhI CCWWGG 4 cut(s) 354, 1677, 1972, 2306
FaeI CATG 8 cut(s) 226, 698, 1405, 1494, 1661, 1681, 1976, 2241
FalI AAGNNNNNCTT 2 cut(s) 1733, 1765
FaqI GGGAC 3 cut(s) 1346, 1954, 2093
FatI CATG 8 cut(s) 222, 694, 1401, 1490, 1657, 1677, 1972, 2237
FauI CCCGC 1 cut(s) 1581
FauNDI CATATG 1 cut(s) 186
FbaI TGATCA 1 cut(s) 145
FblI GTMKAC 2 cut(s) 1174, 2027
Fnu4HI GCNGC 3 cut(s) 449, 889, 2172
FokI GGATG 7 cut(s) 569, 1078, 1155, 1469, 1734, 1739, 2336
FriOI GRGCYC 1 cut(s) 2143
Fsp4HI GCNGC 3 cut(s) 449, 889, 2172
FspBI CTAG 9 cut(s) 495, 645, 654, 882, 1083, 1521, 2088, 2445, 2526
GlaI GCGC 1 cut(s) 352
GluI GCNGC 3 cut(s) 449, 889, 2172
GsuI CTGGAG 4 cut(s) 1441, 1458, 1882, 2414
HaeIII GGCC 3 cut(s) 205, 1644, 2541
HgaI GACGC 1 cut(s) 1824
HhaI GCGC 1 cut(s) 353
Hin1II CATG 8 cut(s) 226, 698, 1405, 1494, 1661, 1681, 1976, 2241
Hin6I GCGC 1 cut(s) 351
HinP1I GCGC 1 cut(s) 351
HincII GTYRAC 2 cut(s) 1594, 1768
HindII GTYRAC 2 cut(s) 1594, 1768
HindIII AAGCTT 1 cut(s) 1002
HpaI GTTAAC 1 cut(s) 1768
HphI GGTGA 7 cut(s) 116, 494, 497, 862, 961, 1310, 2557
Hpy166II GTNNAC 8 cut(s) 47, 932, 1175, 1248, 1318, 1594, 1768, 2028
Hpy188I TCNGA 7 cut(s) 145, 212, 727, 810, 877, 1191, 2335
Hpy8I GTNNAC 8 cut(s) 47, 932, 1175, 1248, 1318, 1594, 1768, 2028
HpyAV CCTTC 7 cut(s) 104, 525, 690, 1114, 1306, 1436, 1624
HpyCH4III ACNGT 4 cut(s) 1195, 2023, 2084, 2457
HpyCH4IV ACGT 3 cut(s) 49, 300, 1252
HpyF10VI GCNNNNNNNGC 2 cut(s) 1871, 2450
HpyF3I CTNAG 9 cut(s) 132, 200, 249, 876, 1299, 1778, 2004, 2075, 2144
HpySE526I ACGT 3 cut(s) 49, 300, 1252
Hsp92II CATG 8 cut(s) 226, 698, 1405, 1494, 1661, 1681, 1976, 2241
HspAI GCGC 1 cut(s) 351
Ksp22I TGATCA 1 cut(s) 145
KspAI GTTAAC 1 cut(s) 1768
Kzo9I GATC 5 cut(s) 7, 145, 190, 864, 2491
LguI GCTCTTC 1 cut(s) 387
LmnI GCTCC 2 cut(s) 1542, 2471
Lsp1109I GCAGC 3 cut(s) 460, 900, 2183
LweI GCATC 5 cut(s) 1056, 1419, 1554, 2232, 2314
MaeI CTAG 9 cut(s) 495, 645, 654, 882, 1083, 1521, 2088, 2445, 2526
MaeII ACGT 3 cut(s) 49, 300, 1252
MaeIII GTNAC 3 cut(s) 1236, 1745, 2042
MalI GATC 5 cut(s) 9, 147, 192, 866, 2493
MboI GATC 5 cut(s) 7, 145, 190, 864, 2491
MflI RGATCY 2 cut(s) 7, 190
MhlI GDGCHC 3 cut(s) 268, 1308, 2143
MlsI TGGCCA 2 cut(s) 1644, 2541
MluNI TGGCCA 2 cut(s) 1644, 2541
MlyI GAGTC 3 cut(s) 315, 1170, 1753
Mox20I TGGCCA 2 cut(s) 1644, 2541
MscI TGGCCA 2 cut(s) 1644, 2541
MslI CAYNNNNRTG 5 cut(s) 1101, 1522, 1752, 2187, 2335
Msp20I TGGCCA 2 cut(s) 1644, 2541
MspCI CTTAAG 1 cut(s) 1739
MspR9I CCNGG 5 cut(s) 431, 777, 893, 1437, 2543
Mva1269I GAATGC 1 cut(s) 1782
MvaI CCWGG 5 cut(s) 431, 777, 893, 1437, 2543
MwoI GCNNNNNNNGC 2 cut(s) 1871, 2450
NcoI CCATGG 2 cut(s) 1677, 1972
NdeI CATATG 1 cut(s) 186
NdeII GATC 5 cut(s) 7, 145, 190, 864, 2491
NheI GCTAGC 1 cut(s) 2525
NlaIII CATG 8 cut(s) 226, 698, 1405, 1494, 1661, 1681, 1976, 2241
NlaIV GGNNCC 4 cut(s) 192, 821, 1334, 1712
NmuCI GTSAC 2 cut(s) 1745, 2042
NspI RCATGY 1 cut(s) 2241
NspV TTCGAA 1 cut(s) 284
PagI TCATGA 1 cut(s) 1657
PceI AGGCCT 1 cut(s) 205
PciSI GCTCTTC 1 cut(s) 387
PctI GAATGC 1 cut(s) 1782
PfeI GAWTC 9 cut(s) 213, 736, 1075, 1186, 1393, 1487, 1608, 1661, 1682
PflFI GACNNNGTC 1 cut(s) 1195
PkrI GCNGC 3 cut(s) 450, 890, 2173
PleI GAGTC 3 cut(s) 315, 1170, 1752
PmaCI CACGTG 1 cut(s) 1253
PmlI CACGTG 1 cut(s) 1253
PpsI GAGTC 3 cut(s) 315, 1170, 1752
Ppu21I YACGTR 1 cut(s) 1253
PpuMI RGGWCCY 2 cut(s) 23, 1333
PshAI GACNNNNGTC 1 cut(s) 1599
PsiI TTATAA 2 cut(s) 257, 1905
Psp124BI GAGCTC 1 cut(s) 2143
Psp1406I AACGTT 1 cut(s) 300
Psp5II RGGWCCY 2 cut(s) 23, 1333
Psp6I CCWGG 5 cut(s) 429, 775, 891, 1435, 2541
PspCI CACGTG 1 cut(s) 1253
PspGI CCWGG 5 cut(s) 429, 775, 891, 1435, 2541
PspN4I GGNNCC 4 cut(s) 192, 821, 1334, 1712
PspPI GGNCC 3 cut(s) 23, 1333, 1808
PspPPI RGGWCCY 2 cut(s) 23, 1333
PsuI RGATCY 2 cut(s) 7, 190
PsyI GACNNNGTC 1 cut(s) 1195
RsaI GTAC 3 cut(s) 577, 1297, 2051
RsaNI GTAC 3 cut(s) 576, 1296, 2050
RseI CAYNNNNRTG 5 cut(s) 1101, 1522, 1752, 2187, 2335
SacI GAGCTC 1 cut(s) 2143
SapI GCTCTTC 1 cut(s) 387
SatI GCNGC 3 cut(s) 449, 889, 2172
Sau3AI GATC 5 cut(s) 7, 145, 190, 864, 2491
Sau96I GGNCC 3 cut(s) 23, 1333, 1808
ScaI AGTACT 1 cut(s) 1297
SchI GAGTC 3 cut(s) 315, 1170, 1753
ScrFI CCNGG 5 cut(s) 431, 777, 893, 1437, 2543
SduI GDGCHC 3 cut(s) 268, 1308, 2143
SfaNI GCATC 5 cut(s) 1056, 1419, 1554, 2232, 2314
SfuI TTCGAA 1 cut(s) 284
SinI GGWCC 3 cut(s) 23, 1333, 1808
SmiMI CAYNNNNRTG 5 cut(s) 1101, 1522, 1752, 2187, 2335
SmlI CTYRAG 2 cut(s) 1739, 2349
SmoI CTYRAG 2 cut(s) 1739, 2349
SpeI ACTAGT 1 cut(s) 494
SseBI AGGCCT 1 cut(s) 205
SsiI CCGC 1 cut(s) 1588
SspI AATATT 1 cut(s) 2179
SspMI CTAG 9 cut(s) 495, 645, 654, 882, 1083, 1521, 2088, 2445, 2526
SstI GAGCTC 1 cut(s) 2143
StuI AGGCCT 1 cut(s) 205
StyD4I CCNGG 5 cut(s) 429, 775, 891, 1435, 2541
StyI CCWWGG 4 cut(s) 354, 1677, 1972, 2306
TaaI ACNGT 4 cut(s) 1195, 2023, 2084, 2457
TaiI ACGT 3 cut(s) 52, 303, 1255
TaqI TCGA 3 cut(s) 284, 1529, 2137
TatI WGTACW 2 cut(s) 575, 1295
TfiI GAWTC 9 cut(s) 213, 736, 1075, 1186, 1393, 1487, 1608, 1661, 1682
TscAI CASTG 3 cut(s) 1188, 2189, 2219
TseFI GTSAC 2 cut(s) 1745, 2042
TseI GCWGC 3 cut(s) 448, 888, 2171
Tsp45I GTSAC 2 cut(s) 1745, 2042
TspDTI ATGAA 9 cut(s) 152, 429, 849, 1406, 1479, 1484, 2218, 2295, 2382
TspGWI ACGGA 3 cut(s) 746, 1058, 1146
TspRI CASTG 3 cut(s) 1188, 2189, 2219
Tth111I GACNNNGTC 1 cut(s) 1195
Vha464I CTTAAG 1 cut(s) 1739
VpaK11BI GGWCC 3 cut(s) 23, 1333, 1808
XagI CCTNNNNNAGG 2 cut(s) 1440, 1880
XapI RAATTY 9 cut(s) 280, 1732, 1773, 1821, 1847, 1892, 1980, 2285, 2374
XbaI TCTAGA 4 cut(s) 644, 1082, 1520, 2087
XceI RCATGY 1 cut(s) 2241
XcmI CCANNNNNNNNNTGG 1 cut(s) 2304
XmiI GTMKAC 2 cut(s) 1174, 2027
XspI CTAG 9 cut(s) 495, 645, 654, 882, 1083, 1521, 2088, 2445, 2526
ZrmI AGTACT 1 cut(s) 1297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.