PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1894 |
| Acc36I | ACCTGC | 2 cut(s) | 1379, 1894 |
| AccB1I | GGYRCC | 1 cut(s) | 197 |
| AccI | GTMKAC | 3 cut(s) | 6, 924, 1846 |
| AccII | CGCG | 3 cut(s) | 60, 221, 772 |
| AclI | AACGTT | 2 cut(s) | 48, 2024 |
| AclWI | GGATC | 5 cut(s) | 194, 258, 2051, 2884, 3038 |
| AcoI | YGGCCR | 3 cut(s) | 202, 240, 285 |
| AcsI | RAATTY | 6 cut(s) | 107, 939, 1365, 1715, 1871, 3124 |
| AcuI | CTGAAG | 3 cut(s) | 311, 1133, 2607 |
| AdeI | CACNNNGTG | 1 cut(s) | 367 |
| AfaI | GTAC | 5 cut(s) | 56, 305, 1669, 2707, 2716 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 280, 863, 1510, 1517, 2763 |
| AflIII | ACRYGT | 1 cut(s) | 2610 |
| AhlI | ACTAGT | 1 cut(s) | 2870 |
| AjnI | CCWGG | 5 cut(s) | 75, 237, 306, 2003, 3046 |
| Alw21I | GWGCWC | 3 cut(s) | 402, 2627, 2828 |
| Alw26I | GTCTC | 2 cut(s) | 203, 363 |
| AlwI | GGATC | 5 cut(s) | 194, 258, 2051, 2884, 3038 |
| AoxI | GGCC | 5 cut(s) | 202, 240, 285, 386, 765 |
| ApeKI | GCWGC | 6 cut(s) | 508, 991, 994, 1372, 1592, 2922 |
| ApoI | RAATTY | 6 cut(s) | 107, 939, 1365, 1715, 1871, 3124 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1340, 1372 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2123 |
| AspLEI | GCGC | 2 cut(s) | 75, 774 |
| AspS9I | GGNCC | 5 cut(s) | 79, 386, 2000, 2462, 2675 |
| AsuC2I | CCSGG | 1 cut(s) | 1512 |
| AsuHPI | GGTGA | 6 cut(s) | 151, 388, 826, 1541, 1918, 2603 |
| AvaII | GGWCC | 4 cut(s) | 79, 2000, 2462, 2675 |
| AxyI | CCTNAGG | 1 cut(s) | 789 |
| BalI | TGGCCA | 2 cut(s) | 242, 287 |
| BanI | GGYRCC | 1 cut(s) | 197 |
| BanII | GRGCYC | 2 cut(s) | 2828, 2839 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1732, 1764 |
| BauI | CACGAG | 2 cut(s) | 68, 206 |
| Bbv12I | GWGCWC | 3 cut(s) | 402, 2627, 2828 |
| BbvCI | CCTCAGC | 1 cut(s) | 480 |
| BbvI | GCAGC | 6 cut(s) | 520, 981, 1003, 1359, 1579, 2909 |
| BccI | CCATC | 7 cut(s) | 129, 1597, 1911, 1991, 2345, 2564, 3073 |
| BceAI | ACGGC | 5 cut(s) | 58, 211, 263, 373, 379 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1525, 1559 |
| BciT130I | CCWGG | 5 cut(s) | 77, 239, 308, 2005, 3048 |
| BclI | TGATCA | 2 cut(s) | 2182, 2311 |
| BcnI | CCSGG | 1 cut(s) | 1512 |
| BcoDI | GTCTC | 2 cut(s) | 203, 363 |
| BcuI | ACTAGT | 1 cut(s) | 2870 |
| BfoI | RGCGCY | 1 cut(s) | 76 |
| BfuAI | ACCTGC | 2 cut(s) | 1379, 1894 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 284 |
| BglII | AGATCT | 1 cut(s) | 611 |
| BlpI | GCTNAGC | 2 cut(s) | 1579, 2934 |
| BmcAI | AGTACT | 1 cut(s) | 2707 |
| Bme1390I | CCNGG | 6 cut(s) | 77, 239, 308, 1512, 2005, 3048 |
| Bme18I | GGWCC | 4 cut(s) | 79, 2000, 2462, 2675 |
| BmgT120I | GGNCC | 5 cut(s) | 79, 386, 2000, 2462, 2675 |
| BmiI | GGNNCC | 7 cut(s) | 199, 387, 2002, 2463, 2676, 2838, 3063 |
| BmrFI | CCNGG | 6 cut(s) | 77, 239, 308, 1512, 2005, 3048 |
| BmrI | ACTGGG | 1 cut(s) | 689 |
| BmsI | GCATC | 5 cut(s) | 450, 592, 1533, 3012, 3067 |
| BmuI | ACTGGG | 1 cut(s) | 689 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1090, 1122 |
| BpmI | CTGGAG | 1 cut(s) | 329 |
| Bpu10I | CCTNAGC | 2 cut(s) | 480, 567 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1579, 2934 |
| BpuEI | CTTGAG | 3 cut(s) | 449, 2377, 3053 |
| BpuMI | CCSGG | 1 cut(s) | 1512 |
| BsaAI | YACGTR | 1 cut(s) | 1892 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2055, 2881 |
| BsaI | GGTCTC | 2 cut(s) | 203, 363 |
| BsaJI | CCNNGG | 3 cut(s) | 279, 2003, 2465 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 280, 863, 1510, 1517, 2763 |
| Bse118I | RCCGGY | 3 cut(s) | 200, 349, 548 |
| Bse1I | ACTGG | 5 cut(s) | 684, 690, 1028, 1118, 2773 |
| Bse21I | CCTNAGG | 1 cut(s) | 789 |
| Bse3DI | GCAATG | 1 cut(s) | 2581 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2055, 2881 |
| BseBI | CCWGG | 5 cut(s) | 77, 239, 308, 2005, 3048 |
| BseDI | CCNNGG | 3 cut(s) | 279, 2003, 2465 |
| BseJI | GATNNNNATC | 2 cut(s) | 2055, 2881 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 280, 863, 1510, 1517, 2763 |
| BseMI | GCAATG | 1 cut(s) | 2581 |
| BseMII | CTCAG | 6 cut(s) | 38, 471, 581, 1593, 1664, 1701 |
| BseNI | ACTGG | 5 cut(s) | 684, 690, 1028, 1118, 2773 |
| BseRI | GAGGAG | 2 cut(s) | 2579, 3050 |
| BseXI | GCAGC | 6 cut(s) | 520, 981, 1003, 1359, 1579, 2909 |
| BseYI | CCCAGC | 1 cut(s) | 2762 |
| BsgI | GTGCAG | 1 cut(s) | 1052 |
| Bsh1236I | CGCG | 3 cut(s) | 60, 221, 772 |
| BshFI | GGCC | 5 cut(s) | 204, 242, 287, 388, 767 |
| BshNI | GGYRCC | 1 cut(s) | 197 |
| BsiHKAI | GWGCWC | 3 cut(s) | 402, 2627, 2828 |
| BsiSI | CCGG | 5 cut(s) | 184, 201, 350, 549, 1511 |
| BslFI | GGGAC | 6 cut(s) | 134, 880, 1325, 1986, 2475, 2779 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 280, 863, 1510, 1517, 2763 |
| BsmAI | GTCTC | 2 cut(s) | 203, 363 |
| BsmFI | GGGAC | 6 cut(s) | 134, 880, 1325, 1986, 2475, 2779 |
| BsmI | GAATGC | 1 cut(s) | 1051 |
| BsnI | GGCC | 5 cut(s) | 204, 242, 287, 388, 767 |
| Bso31I | GGTCTC | 2 cut(s) | 203, 363 |
| Bsp1286I | GDGCHC | 4 cut(s) | 402, 2627, 2828, 2839 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1579, 2934 |
| Bsp19I | CCATGG | 1 cut(s) | 2465 |
| BspANI | GGCC | 5 cut(s) | 204, 242, 287, 388, 767 |
| BspCNI | CTCAG | 6 cut(s) | 37, 472, 580, 1592, 1663, 1702 |
| BspFNI | CGCG | 3 cut(s) | 60, 221, 772 |
| BspLI | GGNNCC | 7 cut(s) | 199, 387, 2002, 2463, 2676, 2838, 3063 |
| BspMI | ACCTGC | 2 cut(s) | 1379, 1894 |
| BspPI | GGATC | 5 cut(s) | 194, 258, 2051, 2884, 3038 |
| BspQI | GCTCTTC | 1 cut(s) | 2816 |
| BspT107I | GGYRCC | 1 cut(s) | 197 |
| BspTNI | GGTCTC | 2 cut(s) | 203, 363 |
| BsrDI | GCAATG | 1 cut(s) | 2581 |
| BsrFI | RCCGGY | 3 cut(s) | 200, 349, 548 |
| BsrI | ACTGG | 5 cut(s) | 684, 690, 1028, 1118, 2773 |
| BssAI | RCCGGY | 3 cut(s) | 200, 349, 548 |
| BssECI | CCNNGG | 3 cut(s) | 279, 2003, 2465 |
| BssSI | CACGAG | 2 cut(s) | 68, 206 |
| BssT1I | CCWWGG | 1 cut(s) | 2465 |
| Bst2BI | CACGAG | 2 cut(s) | 68, 206 |
| Bst2UI | CCWGG | 5 cut(s) | 77, 239, 308, 2005, 3048 |
| Bst4CI | ACNGT | 6 cut(s) | 139, 455, 1276, 1739, 2202, 2602 |
| Bst6I | CTCTTC | 5 cut(s) | 522, 855, 1753, 1965, 2816 |
| BstBAI | YACGTR | 1 cut(s) | 1892 |
| BstC8I | GCNNGC | 3 cut(s) | 30, 351, 2249 |
| BstDSI | CCRYGG | 2 cut(s) | 279, 2465 |
| BstFNI | CGCG | 3 cut(s) | 60, 221, 772 |
| BstH2I | RGCGCY | 1 cut(s) | 76 |
| BstHHI | GCGC | 2 cut(s) | 75, 774 |
| BstMAI | GTCTC | 2 cut(s) | 203, 363 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 284, 406, 1589 |
| BstNI | CCWGG | 5 cut(s) | 77, 239, 308, 2005, 3048 |
| BstNSI | RCATGY | 1 cut(s) | 2614 |
| BstSCI | CCNGG | 6 cut(s) | 75, 237, 306, 1510, 2003, 3046 |
| BstSNI | TACGTA | 1 cut(s) | 1892 |
| BstUI | CGCG | 3 cut(s) | 60, 221, 772 |
| BstV1I | GCAGC | 6 cut(s) | 520, 981, 1003, 1359, 1579, 2909 |
| BstX2I | RGATCY | 2 cut(s) | 250, 611 |
| BstYI | RGATCY | 2 cut(s) | 250, 611 |
| Bsu36I | CCTNAGG | 1 cut(s) | 789 |
| BsuRI | GGCC | 5 cut(s) | 204, 242, 287, 388, 767 |
| BtgI | CCRYGG | 2 cut(s) | 279, 2465 |
| BtsIMutI | CAGTG | 5 cut(s) | 430, 460, 697, 1035, 2441 |
| BveI | ACCTGC | 2 cut(s) | 1379, 1894 |
| Cac8I | GCNNGC | 3 cut(s) | 30, 351, 2249 |
| CfoI | GCGC | 2 cut(s) | 75, 774 |
| Cfr10I | RCCGGY | 3 cut(s) | 200, 349, 548 |
| Cfr13I | GGNCC | 5 cut(s) | 79, 386, 2000, 2462, 2675 |
| CseI | GACGC | 2 cut(s) | 49, 748 |
| Csp6I | GTAC | 5 cut(s) | 55, 304, 1668, 2706, 2715 |
| CviAII | CATG | 7 cut(s) | 559, 1760, 1876, 2048, 2466, 2611, 2732 |
| CviQI | GTAC | 5 cut(s) | 55, 304, 1668, 2706, 2715 |
| DraIII | CACNNNGTG | 1 cut(s) | 367 |
| EaeI | YGGCCR | 3 cut(s) | 202, 240, 285 |
| Eam1104I | CTCTTC | 5 cut(s) | 522, 855, 1753, 1965, 2816 |
| EarI | CTCTTC | 5 cut(s) | 522, 855, 1753, 1965, 2816 |
| EciI | GGCGGA | 2 cut(s) | 1489, 1536 |
| Ecl136II | GAGCTC | 1 cut(s) | 2826 |
| Eco105I | TACGTA | 1 cut(s) | 1892 |
| Eco130I | CCWWGG | 1 cut(s) | 2465 |
| Eco24I | GRGCYC | 2 cut(s) | 2828, 2839 |
| Eco31I | GGTCTC | 2 cut(s) | 203, 363 |
| Eco32I | GATATC | 2 cut(s) | 421, 1694 |
| Eco47I | GGWCC | 4 cut(s) | 79, 2000, 2462, 2675 |
| Eco53kI | GAGCTC | 1 cut(s) | 2826 |
| Eco57I | CTGAAG | 3 cut(s) | 311, 1133, 2607 |
| Eco81I | CCTNAGG | 1 cut(s) | 789 |
| EcoICRI | GAGCTC | 1 cut(s) | 2826 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2675 |
| EcoRI | GAATTC | 3 cut(s) | 1715, 1871, 3124 |
| EcoRII | CCWGG | 5 cut(s) | 75, 237, 306, 2003, 3046 |
| EcoRV | GATATC | 2 cut(s) | 421, 1694 |
| EcoT14I | CCWWGG | 1 cut(s) | 2465 |
| EcoT38I | GRGCYC | 2 cut(s) | 2828, 2839 |
| ErhI | CCWWGG | 1 cut(s) | 2465 |
| FaeI | CATG | 7 cut(s) | 562, 1763, 1879, 2051, 2469, 2614, 2735 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1949, 1981, 2226, 2258 |
| FaqI | GGGAC | 6 cut(s) | 134, 880, 1325, 1986, 2475, 2779 |
| FatI | CATG | 7 cut(s) | 558, 1759, 1875, 2047, 2465, 2610, 2731 |
| FauI | CCCGC | 2 cut(s) | 346, 512 |
| FbaI | TGATCA | 2 cut(s) | 2182, 2311 |
| FblI | GTMKAC | 3 cut(s) | 6, 924, 1846 |
| FriOI | GRGCYC | 2 cut(s) | 2828, 2839 |
| GlaI | GCGC | 2 cut(s) | 74, 773 |
| GsaI | CCCAGC | 1 cut(s) | 2766 |
| GsuI | CTGGAG | 1 cut(s) | 329 |
| HaeII | RGCGCY | 1 cut(s) | 76 |
| HaeIII | GGCC | 5 cut(s) | 204, 242, 287, 388, 767 |
| HapII | CCGG | 5 cut(s) | 184, 201, 350, 549, 1511 |
| HgaI | GACGC | 2 cut(s) | 49, 748 |
| HhaI | GCGC | 2 cut(s) | 75, 774 |
| Hin1II | CATG | 7 cut(s) | 562, 1763, 1879, 2051, 2469, 2614, 2735 |
| Hin6I | GCGC | 2 cut(s) | 73, 772 |
| HinP1I | GCGC | 2 cut(s) | 73, 772 |
| HincII | GTYRAC | 4 cut(s) | 7, 451, 1341, 1687 |
| HindII | GTYRAC | 4 cut(s) | 7, 451, 1341, 1687 |
| HindIII | AAGCTT | 3 cut(s) | 323, 1145, 1835 |
| HpaI | GTTAAC | 1 cut(s) | 451 |
| HpaII | CCGG | 5 cut(s) | 184, 201, 350, 549, 1511 |
| HphI | GGTGA | 6 cut(s) | 151, 388, 826, 1541, 1918, 2603 |
| Hpy166II | GTNNAC | 9 cut(s) | 7, 451, 816, 925, 1341, 1687, 1847, 2136, 3029 |
| Hpy8I | GTNNAC | 9 cut(s) | 7, 451, 816, 925, 1341, 1687, 1847, 2136, 3029 |
| Hpy99I | CGWCG | 4 cut(s) | 143, 887, 1489, 1540 |
| HpyCH4III | ACNGT | 6 cut(s) | 139, 455, 1276, 1739, 2202, 2602 |
| HpyCH4IV | ACGT | 6 cut(s) | 48, 534, 806, 1487, 1891, 2024 |
| HpyCH4V | TGCA | 8 cut(s) | 545, 997, 1033, 1546, 1627, 1664, 2560, 2815 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 284, 406, 1589 |
| HpySE526I | ACGT | 6 cut(s) | 48, 534, 806, 1487, 1891, 2024 |
| Hsp92II | CATG | 7 cut(s) | 562, 1763, 1879, 2051, 2469, 2614, 2735 |
| HspAI | GCGC | 2 cut(s) | 73, 772 |
| KroI | GCCGGC | 1 cut(s) | 349 |
| KroNI | GCCGGC | 1 cut(s) | 351 |
| Ksp22I | TGATCA | 2 cut(s) | 2182, 2311 |
| KspAI | GTTAAC | 1 cut(s) | 451 |
| LguI | GCTCTTC | 1 cut(s) | 2816 |
| LmnI | GCTCC | 6 cut(s) | 310, 397, 505, 1412, 2842, 2864 |
| Lsp1109I | GCAGC | 6 cut(s) | 520, 981, 1003, 1359, 1579, 2909 |
| LweI | GCATC | 5 cut(s) | 450, 592, 1533, 3012, 3067 |
| MaeII | ACGT | 6 cut(s) | 48, 534, 806, 1487, 1891, 2024 |
| MaeIII | GTNAC | 1 cut(s) | 1887 |
| MflI | RGATCY | 2 cut(s) | 250, 611 |
| MhlI | GDGCHC | 4 cut(s) | 402, 2627, 2828, 2839 |
| MlsI | TGGCCA | 2 cut(s) | 242, 287 |
| MluNI | TGGCCA | 2 cut(s) | 242, 287 |
| MlyI | GAGTC | 3 cut(s) | 16, 158, 2357 |
| MmeI | TCCRAC | 4 cut(s) | 393, 468, 579, 2880 |
| Mox20I | TGGCCA | 2 cut(s) | 242, 287 |
| MroNI | GCCGGC | 1 cut(s) | 349 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2123 |
| MscI | TGGCCA | 2 cut(s) | 242, 287 |
| MslI | CAYNNNNRTG | 2 cut(s) | 557, 690 |
| Msp20I | TGGCCA | 2 cut(s) | 242, 287 |
| MspA1I | CMGCKG | 4 cut(s) | 331, 409, 994, 1583 |
| MspI | CCGG | 5 cut(s) | 184, 201, 350, 549, 1511 |
| MspR9I | CCNGG | 6 cut(s) | 77, 239, 308, 1512, 2005, 3048 |
| Mva1269I | GAATGC | 1 cut(s) | 1051 |
| MvaI | CCWGG | 5 cut(s) | 77, 239, 308, 2005, 3048 |
| MvnI | CGCG | 3 cut(s) | 60, 221, 772 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 284, 406, 1589 |
| NaeI | GCCGGC | 1 cut(s) | 351 |
| NciI | CCSGG | 1 cut(s) | 1512 |
| NcoI | CCATGG | 1 cut(s) | 2465 |
| NgoMIV | GCCGGC | 1 cut(s) | 349 |
| NlaIII | CATG | 7 cut(s) | 562, 1763, 1879, 2051, 2469, 2614, 2735 |
| NlaIV | GGNNCC | 7 cut(s) | 199, 387, 2002, 2463, 2676, 2838, 3063 |
| NspI | RCATGY | 1 cut(s) | 2614 |
| PaqCI | CACCTGC | 1 cut(s) | 1894 |
| PciI | ACATGT | 1 cut(s) | 2610 |
| PciSI | GCTCTTC | 1 cut(s) | 2816 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 803 |
| PctI | GAATGC | 1 cut(s) | 1051 |
| PdiI | GCCGGC | 1 cut(s) | 351 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2123 |
| PfeI | GAWTC | 8 cut(s) | 574, 845, 1532, 1616, 1639, 1678, 2431, 3083 |
| PfoI | TCCNGGA | 1 cut(s) | 1510 |
| PleI | GAGTC | 3 cut(s) | 16, 158, 2356 |
| PpsI | GAGTC | 3 cut(s) | 16, 158, 2356 |
| Ppu21I | YACGTR | 1 cut(s) | 1892 |
| PpuMI | RGGWCCY | 1 cut(s) | 2675 |
| PscI | ACATGT | 1 cut(s) | 2610 |
| Psp124BI | GAGCTC | 1 cut(s) | 2828 |
| Psp1406I | AACGTT | 2 cut(s) | 48, 2024 |
| Psp5II | RGGWCCY | 1 cut(s) | 2675 |
| Psp6I | CCWGG | 5 cut(s) | 75, 237, 306, 2003, 3046 |
| PspFI | CCCAGC | 1 cut(s) | 2762 |
| PspGI | CCWGG | 5 cut(s) | 75, 237, 306, 2003, 3046 |
| PspN4I | GGNNCC | 7 cut(s) | 199, 387, 2002, 2463, 2676, 2838, 3063 |
| PspPI | GGNCC | 5 cut(s) | 79, 386, 2000, 2462, 2675 |
| PspPPI | RGGWCCY | 1 cut(s) | 2675 |
| PsuI | RGATCY | 2 cut(s) | 250, 611 |
| PvuII | CAGCTG | 3 cut(s) | 331, 994, 1583 |
| RsaI | GTAC | 5 cut(s) | 56, 305, 1669, 2707, 2716 |
| RsaNI | GTAC | 5 cut(s) | 55, 304, 1668, 2706, 2715 |
| RseI | CAYNNNNRTG | 2 cut(s) | 557, 690 |
| SacI | GAGCTC | 1 cut(s) | 2828 |
| SalI | GTCGAC | 1 cut(s) | 5 |
| SapI | GCTCTTC | 1 cut(s) | 2816 |
| Sau96I | GGNCC | 5 cut(s) | 79, 386, 2000, 2462, 2675 |
| ScaI | AGTACT | 1 cut(s) | 2707 |
| SchI | GAGTC | 3 cut(s) | 16, 158, 2357 |
| ScrFI | CCNGG | 6 cut(s) | 77, 239, 308, 1512, 2005, 3048 |
| SduI | GDGCHC | 4 cut(s) | 402, 2627, 2828, 2839 |
| SfaNI | GCATC | 5 cut(s) | 450, 592, 1533, 3012, 3067 |
| SinI | GGWCC | 4 cut(s) | 79, 2000, 2462, 2675 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 557, 690 |
| SmlI | CTYRAG | 3 cut(s) | 464, 2356, 3032 |
| SmoI | CTYRAG | 3 cut(s) | 464, 2356, 3032 |
| SnaBI | TACGTA | 1 cut(s) | 1892 |
| SpeI | ACTAGT | 1 cut(s) | 2870 |
| SstI | GAGCTC | 1 cut(s) | 2828 |
| StyD4I | CCNGG | 6 cut(s) | 75, 237, 306, 1510, 2003, 3046 |
| StyI | CCWWGG | 1 cut(s) | 2465 |
| TaaI | ACNGT | 6 cut(s) | 139, 455, 1276, 1739, 2202, 2602 |
| TaiI | ACGT | 6 cut(s) | 51, 537, 809, 1490, 1894, 2027 |
| TaqII | GACCGA | 1 cut(s) | 1704 |
| TatI | WGTACW | 2 cut(s) | 2705, 2714 |
| TauI | GCSGC | 7 cut(s) | 35, 224, 409, 592, 767, 777, 1521 |
| TfiI | GAWTC | 8 cut(s) | 574, 845, 1532, 1616, 1639, 1678, 2431, 3083 |
| TscAI | CASTG | 5 cut(s) | 430, 460, 697, 1035, 2441 |
| TseI | GCWGC | 6 cut(s) | 508, 991, 994, 1372, 1592, 2922 |
| TspDTI | ATGAA | 9 cut(s) | 842, 883, 951, 1670, 1781, 1864, 1994, 2078, 2858 |
| TspRI | CASTG | 5 cut(s) | 430, 460, 697, 1035, 2441 |
| VpaK11BI | GGWCC | 4 cut(s) | 79, 2000, 2462, 2675 |
| XapI | RAATTY | 6 cut(s) | 107, 939, 1365, 1715, 1871, 3124 |
| XbaI | TCTAGA | 2 cut(s) | 614, 2204 |
| XceI | RCATGY | 1 cut(s) | 2614 |
| XmiI | GTMKAC | 3 cut(s) | 6, 924, 1846 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2123 |
| ZrmI | AGTACT | 1 cut(s) | 2707 |