Rorug05G0588200

Acetyl-coenzyme A synthetase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
78655130 .. 78657391
2262 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0588200.1

Sequence Viewer

Length: 2235 bp
ATGGCTAATGCATTCATTTTCTTCTTACTCTTGATATTCTCTTCCAATATCATATTTGAAAACATTCATGCTTGCAACCAAACCGAACGCAGCTCTCTGCTGTTCTTAGCTCTCACTCTGTCTTCTCCTCAGTTGAATTGGACTTCTGCTGATTGTTGCAATTGGGAAGGCATTACTTGTAATCGAGATGGTTGGGTCACCCATTTGCAGTTACCCTCCAAAGGGCTCAAACTAAAAGGAGGTATTTTCCCCTCATCATCACTTGCAAATCTCACACATCTCACTCACTTGAATCTCTCCCACAATTCACTCTCTGGTTCTCTAGATCAAACTGAATTCTTCTTGTCCTTGAATGATCTCGAAATCCTAGATTTGAGCTATAACCTTCTTTTTGGAGTGTTACCATCTTCTCTACCATCCAGTCATATTCGGATGGTGGATCTTTCCAACAATCGTTTACATGGTGCAGTTTCATCTTCTTTTTTCCAACAAGCTTGGAATTTGACTAGTTTCAATGTCAGTAACAACACCTTTTCCGGTCCTATCCCATCCTCCATTTGTCGTCCTTCTTCTTCCTCGTTACGACACCTTGATTTTTCCTTCAATATGTTCAATGGTAGTATATCTTCTGGATTGGGGAAGTGTTCCAAACTGCAGGTCTTCCGTGCTGGTTACAATTACCTGTCAGGATCACTTCCAGAAGATATCTTTAATGCTACCACACTTGAAGAGATTTCACTACTTCGGAATTCATTGTATGGAGCAGTGAGTGATAGAATTTCCAACCTCACCAACCTTACAACCCTTGACCTCTCCTATAACCAATTGAGTGGTGTGCTCCCTCTCCATCTTGGGAAGCTCTCCAAGTTGAAATACATTCTCCTTGATTTCAACCATCTGGAAGGTTCATTCCCCCTATCTCTGATGAATTGCACAAACCTTGTTGAACTACGTATGGGAGCCAACAACTTCGGAGGTGATATCTCCATGCTCAATTTTTCCGAACTTAGCCAACTTAGTAAACTCGACTTGCGACAAAATAACTTCTTTGGTATCTTGCCGAGAAGCCTCTACTCGTGCAAGTTCTTGAAAGCAATTCGAGTGGCCTACAATAATCTAGAGGTTCAAATAGAGCCTGAAATTCTTTCATTGAAATCCCTGTCCTTCCTCTCACTTGGTATGAACAAACGTTTGACAAATATCAAAGAGGCAATGAGGATACTGATGGGTTGCAAACGCCTTGCAGTCCTATCATTACAATCCAGTTTTTTAGGTGAGGAAATGCCGAACAGTGTTGAAATGGCGGATTTTAATGGATTTCAAAATCTTCTACTTTTAGATTTGAATTCATGTAACCTTAGTGGTATAATTCCTTCATGGCTATCGAAGCTGAAAAAGTTACTGATCTTGGAACTGAATAACAACAGAATCACTGGCTCAATTCCAAGTTGGCTGGGGACTCTTCCAAGTTTGTATTTCTTAAACATGCAATTCAACCAACTTTCTGGAGAATTTCCAAAGGAATTGTGCACACTACCTATGTTAGTATCTGGACAAGCTGAAGCTCAAGTAGGTCGTATTTATGCTGAACTGCCTATTTACTACAGTCCTAGTGTGCATGCAGAACCTTTACAGTACAATTATATATTTTATACCCCATTTATACACCTAGGTCACAATTGCCTTAGTGGGAATATACCTATAGAGATTGGCCAAATGCAGCATCTCCAGCAGCTGGATCTTAGTGCTAACAACTTCTCCGGCAACATTCCAGACCAGATTTCTAACCTGAAGTATATTGAGGTACTGGATCTCTCCATGAACGATTTGTCTGGAAAAATCCCGGCGTCATTCACAGGTCTTAATTTCTTATCAAGATTCAATGTCTCGTACAATAATCTTGGAGGACCAATACCATCAAGCACCCAACTCCAAAGTTTCAATGCTTCTGCATTTGAGGGGAATCAACTTTGTGGTGCCCCACTTCAAAATAAGTGTCAGACAACAGAGGGTGCTGATGCACTTGATATGAGCACCCAAGATGCAGACACCAAGGAGCATCAAATTCCATGGTTTTATGTTTCTGTTGCACTTGGGTTCATTACAGGATTTTGGGGAGTCTGTGGTCCCTTGGTGCTTATGAGAAGGTGGAGGTATGCATATTACCATTTCCTAGACAGGTTCCATGTGATGATAGCAACGTGTATGGCAAGCATGAGGAGAAAGTTTGTTTAG

Protein Analysis

744

Amino Acids

82.99

Weight (kDa)

6.5

Isoelectric Point (pI)

42.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 241 - 300 7.1e-06 Leucine rich repeat
LRR_8 PF13855 442 - 501 7.2e-08 Leucine rich repeat
LRR_8 PF13855 575 - 634 2e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01050
fragaria_vesca FvH4_1g24181 FvH4_1g28741 FvH4_1g29781 FvH4_2g00621 FvH4_2g04885 FvH4_2g11953 FvH4_2g11954 FvH4_2g12001 FvH4_2g12002 FvH4_2g12222 FvH4_2g12223 FvH4_2g38351 FvH4_3g04401 FvH4_3g31330 FvH4_3g33091 FvH4_4g11461 FvH4_5g27993 FvH4_5g27994 FvH4_5g28072 FvH4_5g28231 FvH4_5g28591 FvH4_5g34261 FvH4_6g18162 FvH4_6g25500 FvH4_6g25561 FvH4_6g25792 FvH4_6g27602 FvH4_6g46881
malus_domestica MD03G1019700.v1.1
prunus_persica Prupe.1G055400_v2.0.a1 Prupe.1G179200_v2.0.a1 Prupe.1G208200_v2.0.a1 Prupe.1G231200_v2.0.a1 Prupe.2G044900_v2.0.a1 Prupe.2G055100_v2.0.a1 Prupe.2G097600_v2.0.a1 Prupe.2G114200_v2.0.a1 Prupe.3G109000_v2.0.a1 Prupe.3G109300_v2.0.a1 Prupe.3G109600_v2.0.a1 Prupe.4G246900_v2.0.a1 Prupe.5G026400_v2.0.a1
pyrus_communis pycom05g17130 pycom07g06820 pycom07g18590 pycom07g22730 pycom12401g00120 pycom12401g00180 pycom420g00470
rosa_chinensis RchiOBHm_Chr1g0342591 RchiOBHm_Chr1g0342601 RchiOBHm_Chr1g0342611 RchiOBHm_Chr1g0351011 RchiOBHm_Chr2g0146151 RchiOBHm_Chr2g0171821 RchiOBHm_Chr3g0492921 RchiOBHm_Chr3g0492931 RchiOBHm_Chr4g0406871 RchiOBHm_Chr4g0426311 RchiOBHm_Chr5g0020721 RchiOBHm_Chr5g0050111 RchiOBHm_Chr5g0051681 RchiOBHm_Chr5g0053531 RchiOBHm_Chr5g0054841 RchiOBHm_Chr5g0055061 RchiOBHm_Chr5g0055071 RchiOBHm_Chr6g0248911 RchiOBHm_Chr6g0291741 RchiOBHm_Chr7g0187781 RchiOBHm_Chr7g0220081 RchiOBHm_Chr7g0224391 RchiOBHm_Chr7g0235221
rosa_laevigata RLG00000002133 RLG00000002402 RLG00000002736 RLG00000011046 RLG00000013214 RLG00000016550 RLG00000021669 RLG00000022948 RLG00000023691 RLG00000024682 RLG00000027826 RLG00000029734 RLG00000029831 RLG00000030305 RLG00000037042
rosa_multiflora Rmu_co7992532.1_g000001 Rmu_co8021462.1_g000001 Rmu_co8229237.1_g000001 Rmu_co8281571.1_g000001 Rmu_co8326451.1_g000001 Rmu_co8359553.1_g000001 Rmu_co8372117.1_g000001 Rmu_co8427177.1_g000001 Rmu_co8474063.1_g000002 Rmu_sc0000007.1_g000020 Rmu_sc0000173.1_g000002 Rmu_sc0000367.1_g000086 Rmu_sc0000367.1_g000088 Rmu_sc0000559.1_g000002 Rmu_sc0000733.1_g000014 Rmu_sc0000745.1_g000006 Rmu_sc0000791.1_g000046 Rmu_sc0000791.1_g000049 Rmu_sc0000824.1_g000010 Rmu_sc0000824.1_g000011 Rmu_sc0000834.1_g000009 Rmu_sc0000834.1_g000011 Rmu_sc0000911.1_g000020 Rmu_sc0000935.1_g000034 Rmu_sc0000935.1_g000051 Rmu_sc0000935.1_g000053 Rmu_sc0001000.1_g000005 Rmu_sc0001000.1_g000006 Rmu_sc0001150.1_g000004 Rmu_sc0001227.1_g000002 Rmu_sc0001322.1_g000018 Rmu_sc0001343.1_g000001 Rmu_sc0001356.1_g000004 Rmu_sc0001356.1_g000005 Rmu_sc0001363.1_g000007 Rmu_sc0001463.1_g000012 Rmu_sc0001484.1_g000023 Rmu_sc0001516.1_g000003 Rmu_sc0001516.1_g000005 Rmu_sc0001619.1_g000005 Rmu_sc0001648.1_g000032 Rmu_sc0001648.1_g000035 Rmu_sc0001694.1_g000008 Rmu_sc0001809.1_g000023 Rmu_sc0002093.1_g000027 Rmu_sc0002231.1_g000004 Rmu_sc0002245.1_g000001 Rmu_sc0002245.1_g000003 Rmu_sc0002354.1_g000045 Rmu_sc0002354.1_g000048 Rmu_sc0002368.1_g000014 Rmu_sc0002368.1_g000016 Rmu_sc0002368.1_g000017 Rmu_sc0002401.1_g000030 Rmu_sc0002487.1_g000012 Rmu_sc0002798.1_g000028 Rmu_sc0002923.1_g000012 Rmu_sc0002960.1_g000002 Rmu_sc0003033.1_g000072 Rmu_sc0003133.1_g000015 Rmu_sc0003168.1_g000007 Rmu_sc0003945.1_g000002 Rmu_sc0003945.1_g000004 Rmu_sc0003945.1_g000005 Rmu_sc0003979.1_g000004 Rmu_sc0004005.1_g000007 Rmu_sc0004059.1_g000018 Rmu_sc0004064.1_g000001 Rmu_sc0004083.1_g000007 Rmu_sc0004083.1_g000008 Rmu_sc0004354.1_g000033 Rmu_sc0004368.1_g000035 Rmu_sc0004483.1_g000032 Rmu_sc0004646.1_g000012 Rmu_sc0005014.1_g000006 Rmu_sc0005016.1_g000046 Rmu_sc0005016.1_g000051 Rmu_sc0005033.1_g000005 Rmu_sc0005033.1_g000007 Rmu_sc0005065.1_g000002 Rmu_sc0005065.1_g000004 Rmu_sc0005168.1_g000012 Rmu_sc0005238.1_g000001 Rmu_sc0005365.1_g000012 Rmu_sc0005631.1_g000005 Rmu_sc0005704.1_g000013 Rmu_sc0005704.1_g000014 Rmu_sc0005781.1_g000030 Rmu_sc0005789.1_g000016 Rmu_sc0006185.1_g000001 Rmu_sc0006185.1_g000002 Rmu_sc0006266.1_g000044 Rmu_sc0006561.1_g000018 Rmu_sc0006695.1_g000016 Rmu_sc0007739.1_g000022 Rmu_sc0008050.1_g000013 Rmu_sc0008169.1_g000006 Rmu_sc0008855.1_g000006 Rmu_sc0009298.1_g000002 Rmu_sc0009495.1_g000005 Rmu_sc0010608.1_g000003 Rmu_sc0010958.1_g000005 Rmu_sc0011506.1_g000001 Rmu_sc0011790.1_g000002 Rmu_sc0011790.1_g000003 Rmu_sc0012042.1_g000004 Rmu_sc0012042.1_g000005 Rmu_sc0012140.1_g000020 Rmu_sc0012726.1_g000005 Rmu_sc0012746.1_g000023 Rmu_sc0013193.1_g000002 Rmu_sc0013193.1_g000003 Rmu_sc0017997.1_g000001 Rmu_sc0021401.1_g000001 Rmu_sc0025959.1_g000001 Rmu_sc0026403.1_g000003 Rmu_sc0028616.1_g000002 Rmu_sc0029801.1_g000002 Rmu_sc0032453.1_g000001 Rmu_sc0033672.1_g000002 Rmu_sc0034553.1_g000001 Rmu_sc0036883.1_g000001 Rmu_ssc0000096.1_g000001 Rmu_ssc0000158.1_g000031 Rmu_ssc0000291.1_g000034 Rmu_ssc0000381.1_g000026 Rmu_ssc0000387.1_g000010 Rmu_ssc0000474.1_g000002 Rmu_ssc0000474.1_g000004
rosa_roxburghii Rroxscaffold_1G00020090 Rroxscaffold_1G00020100 Rroxscaffold_1G00022940 Rroxscaffold_1G00044600 Rroxscaffold_1G00054420 Rroxscaffold_1G00054430 Rroxscaffold_1G00056440 Rroxscaffold_2G00090180 Rroxscaffold_2G00101250 Rroxscaffold_2G00110600 Rroxscaffold_2G00152800 Rroxscaffold_4G00320370 Rroxscaffold_4G00320640 Rroxscaffold_4G00322420 Rroxscaffold_4G00324670 Rroxscaffold_5G00332760 Rroxscaffold_5G00345010 Rroxscaffold_5G00345020 Rroxscaffold_5G00355470 Rroxscaffold_5G00385520 Rroxscaffold_6G00394610 Rroxscaffold_6G00394700 Rroxscaffold_7G00164190 Rroxscaffold_7G00182750 Rroxscaffold_7G00183540 Rroxscaffold_7G00203520 Rroxscaffold_7G00211630
rosa_rugosa Rorug01G0041400 Rorug01G0041500 Rorug01G0065300 Rorug01G0065300 Rorug01G0069700 Rorug01G0069800 Rorug01G0070300 Rorug01G0072300 Rorug01G0072900 Rorug01G0093100 Rorug01G0147100.1 Rorug01G0196900 Rorug01G0259700 Rorug02G0162000 Rorug02G0182700 Rorug02G0212300 Rorug02G0214700 Rorug02G0229900 Rorug02G0246100 Rorug02G0257400 Rorug02G0259100 Rorug02G0341400 Rorug02G0341500 Rorug02G0341700 Rorug02G0341800 Rorug02G0355600 Rorug02G0386100 Rorug02G0386100 Rorug02G0387000 Rorug02G0387100 Rorug02G0388400 Rorug02G0388500 Rorug02G0429100 Rorug02G0429100 Rorug02G0455300 Rorug02G0634400 Rorug03G0163200 Rorug03G0198500 Rorug03G0199600 Rorug03G0204000 Rorug03G0265600 Rorug03G0266100 Rorug03G0266200 Rorug03G0280600 Rorug03G0348200 Rorug03G0349700 Rorug03G0349800 Rorug04G0020200 Rorug04G0073700 Rorug04G0215000 Rorug04G0426100 Rorug05G0064200 Rorug05G0064300 Rorug05G0265700 Rorug05G0287400 Rorug05G0287500 Rorug05G0287500 Rorug05G0405000 Rorug05G0525700 Rorug05G0525800 Rorug05G0588200 Rorug06G0038200 Rorug06G0057900 Rorug06G0058000 Rorug06G0058500 Rorug06G0058600 Rorug06G0116700 Rorug06G0159300.1 Rorug06G0159400 Rorug06G0174700 Rorug06G0375500 Rorug07G0091400 Rorug07G0094900 Rorug07G0108100 Rorug07G0140700 Rorug07G0140700 Rorug07G0207100 Rorug07G0207100 Rorug07G0207200 Rorug07G0287300
rosa_samantha Rh1AG100100 Rh1AG104500 Rh1BG150700 Rh1BG237700 Rh1BG334000 Rh1CG090000 Rh1CG100100 Rh1CG347300 Rh1DG090500 Rh1DG096100 Rh1DG107400 Rh1DG182500 Rh1DG265700 Rh1DG365200 Rh2BG256800 Rh2BG361300 Rh2BG468600 Rh2BG549800 Rh2CG270900 Rh2DG276700 Rh2DG276800 Rh2DG377700 Rh2DG477900 Rh3AG161200 Rh3BG138800 Rh3BG185700 Rh3BG269600 Rh3CG176000 Rh4AG006100 Rh4AG216700 Rh4AG355800 Rh4CG108600 Rh5AG141700 Rh5AG480000 Rh5BG014500 Rh5BG134600 Rh5BG295400 Rh5BG552900 Rh5CG058600 Rh5CG286400 Rh5CG350900 Rh5CG575800 Rh5DG004300 Rh5DG254600 Rh5DG356500 Rh6AG106500 Rh6AG191100 Rh6AG224700 Rh6BG074700 Rh6BG181400 Rh6BG352200 Rh6BG408400 Rh6BG453600 Rh6CG047400 Rh6CG172200 Rh6CG189400 Rh6CG515800 Rh6DG042900 Rh6DG163400 Rh7AG089300 Rh7AG227400 Rh7AG275600 Rh7AG375100 Rh7AG460900 Rh7AG485200 Rh7BG146100 Rh7BG354300 Rh7CG077100 Rh7CG294500 Rh7CG393800 Rh7DG041700 Rh7DG062700 Rh7DG091700 Rh7DG178900 Rh7DG192300 Rh7DG297000 Rh7DG403600 Rh7DG411800
rosa_wichuraiana Rw0G007100 Rw0G011430 Rw1G003580 Rw1G004040 Rw1G005880 Rw1G009860 Rw1G009990 Rw1G012190 Rw1G012200 Rw1G013740 Rw1G013750 Rw1G016710 Rw1G021050 Rw2G023790 Rw2G028810 Rw2G035890 Rw2G036250 Rw4G008880 Rw4G014380 Rw4G014390 Rw4G016020 Rw4G037160 Rw5G010060 Rw5G030620 Rw5G033840 Rw5G049840 Rw5G049850 Rw6G003450 Rw6G015080 Rw7G019640 Rw7G024060 Rw7G024070 Rw7G029090 Rw7G037010 Rw7G039170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 646
AccB1I GGYRCC 1 cut(s) 1976
AccB7I CCANNNNNTGG 1 cut(s) 1735
AciI CCGC 1 cut(s) 1304
AclI AACGTT 1 cut(s) 1189
AclWI GGATC 4 cut(s) 447, 697, 1746, 1818
AcoI YGGCCR 1 cut(s) 1711
AcsI RAATTY 8 cut(s) 335, 499, 748, 777, 1140, 1345, 1511, 2064
AcuI CTGAAG 2 cut(s) 1581, 1811
AcyI GRCGYC 1 cut(s) 1847
AfaI GTAC 3 cut(s) 1637, 1806, 1892
AfiI CCNNNNNNNGG 3 cut(s) 221, 222, 1735
AflIII ACRYGT 1 cut(s) 2201
AhlI ACTAGT 1 cut(s) 506
AluBI AGCT 9 cut(s) 93, 110, 378, 494, 859, 1390, 1559, 1565, 1735
AluI AGCT 9 cut(s) 93, 110, 378, 494, 859, 1390, 1559, 1565, 1735
Alw21I GWGCWC 3 cut(s) 840, 1532, 2036
Alw26I GTCTC 1 cut(s) 1891
Alw44I GTGCAC 1 cut(s) 1528
AlwI GGATC 4 cut(s) 447, 697, 1746, 1818
AlwNI CAGNNNCTG 1 cut(s) 1735
AoxI GGCC 2 cut(s) 1104, 1711
ApaLI GTGCAC 1 cut(s) 1528
ApeKI GCWGC 3 cut(s) 90, 1720, 1732
ApoI RAATTY 8 cut(s) 335, 499, 748, 777, 1140, 1345, 1511, 2064
ArsI GACNNNNNNTTYG 4 cut(s) 642, 674, 1981, 2013
Asp700I GAANNNNTTC 1 cut(s) 63
AspA2I CCTAGG 1 cut(s) 1669
AspS9I GGNCC 3 cut(s) 539, 1907, 2126
AsuC2I CCSGG 1 cut(s) 1844
AsuHPI GGTGA 4 cut(s) 190, 781, 989, 1286
AvaII GGWCC 3 cut(s) 539, 1907, 2126
AvrII CCTAGG 1 cut(s) 1669
BaeGI GKGCMC 2 cut(s) 1532, 1981
BalI TGGCCA 1 cut(s) 1713
BanI GGYRCC 1 cut(s) 1976
BanII GRGCYC 1 cut(s) 228
BarI GAAGNNNNNNTAC 4 cut(s) 610, 642, 1357, 1389
BauI CACGAG 1 cut(s) 1075
BbsI GAAGAC 2 cut(s) 114, 652
Bbv12I GWGCWC 3 cut(s) 840, 1532, 2036
BbvI GCAGC 3 cut(s) 102, 1732, 1744
BccI CCATC 9 cut(s) 182, 412, 424, 427, 556, 855, 903, 1219, 1924
BciVI GTATCC 1 cut(s) 1212
BcnI CCSGG 1 cut(s) 1844
BcoDI GTCTC 1 cut(s) 1891
BcuI ACTAGT 1 cut(s) 506
BfaI CTAG 7 cut(s) 323, 368, 507, 1118, 1611, 1670, 2174
BfmI CTRYAG 3 cut(s) 653, 1603, 1701
BfuAI ACCTGC 1 cut(s) 646
BfuI GTATCC 1 cut(s) 1212
BisI GCNGC 3 cut(s) 91, 1721, 1733
BlnI CCTAGG 1 cut(s) 1669
BlsI GCNGC 3 cut(s) 92, 1722, 1734
Bme1390I CCNGG 1 cut(s) 1844
Bme18I GGWCC 3 cut(s) 539, 1907, 2126
BmgT120I GGNCC 3 cut(s) 539, 1907, 2126
BmiI GGNNCC 4 cut(s) 961, 1978, 2128, 2183
BmrFI CCNGG 1 cut(s) 1844
BmsI GCATC 4 cut(s) 1732, 2008, 2032, 2068
BpiI GAAGAC 2 cut(s) 114, 652
BpmI CTGGAG 2 cut(s) 1527, 1712
BpuEI CTTGAG 1 cut(s) 1551
BpuMI CCSGG 1 cut(s) 1844
BsaAI YACGTR 1 cut(s) 953
BsaHI GRCGYC 1 cut(s) 1847
BsaJI CCNNGG 4 cut(s) 1669, 2052, 2069, 2130
BsaWI WCCGGW 1 cut(s) 536
BsaXI ACNNNNNCTCC 2 cut(s) 1742, 1772
Bsc4I CCNNNNNNNGG 3 cut(s) 221, 222, 1735
Bse1I ACTGG 4 cut(s) 420, 1263, 1438, 1812
Bse3DI GCAATG 1 cut(s) 1218
BseDI CCNNGG 4 cut(s) 1669, 2052, 2069, 2130
BseGI GGATG 3 cut(s) 416, 438, 548
BseLI CCNNNNNNNGG 3 cut(s) 221, 222, 1735
BseMI GCAATG 1 cut(s) 1218
BseMII CTCAG 1 cut(s) 143
BseNI ACTGG 4 cut(s) 420, 1263, 1438, 1812
BseRI GAGGAG 2 cut(s) 117, 2233
BseSI GKGCMC 2 cut(s) 1532, 1981
BseXI GCAGC 3 cut(s) 102, 1732, 1744
BseYI CCCAGC 1 cut(s) 1453
BsgI GTGCAG 1 cut(s) 486
BshFI GGCC 2 cut(s) 1106, 1713
BshNI GGYRCC 1 cut(s) 1976
BsiHKAI GWGCWC 3 cut(s) 840, 1532, 2036
BsiSI CCGG 3 cut(s) 537, 1761, 1844
BslFI GGGAC 2 cut(s) 1471, 2112
BslI CCNNNNNNNGG 3 cut(s) 221, 222, 1735
BsmAI GTCTC 1 cut(s) 1891
BsmFI GGGAC 2 cut(s) 1471, 2112
BsmI GAATGC 1 cut(s) 11
BsnI GGCC 2 cut(s) 1106, 1713
Bsp1286I GDGCHC 5 cut(s) 228, 840, 1532, 1981, 2036
Bsp143I GATC 7 cut(s) 325, 355, 439, 689, 1404, 1738, 1810
Bsp19I CCATGG 1 cut(s) 2069
BspACI CCGC 1 cut(s) 1304
BspANI GGCC 2 cut(s) 1106, 1713
BspCNI CTCAG 1 cut(s) 142
BspLI GGNNCC 4 cut(s) 961, 1978, 2128, 2183
BspMAI CTGCAG 1 cut(s) 657
BspMI ACCTGC 1 cut(s) 646
BspPI GGATC 4 cut(s) 447, 697, 1746, 1818
BspT107I GGYRCC 1 cut(s) 1976
BsrDI GCAATG 1 cut(s) 1218
BsrI ACTGG 4 cut(s) 420, 1263, 1438, 1812
BssECI CCNNGG 4 cut(s) 1669, 2052, 2069, 2130
BssMI GATC 7 cut(s) 325, 355, 439, 689, 1404, 1738, 1810
BssNI GRCGYC 1 cut(s) 1847
BssSI CACGAG 1 cut(s) 1075
BssT1I CCWWGG 4 cut(s) 1669, 2052, 2069, 2130
Bst2BI CACGAG 1 cut(s) 1075
Bst4CI ACNGT 3 cut(s) 1292, 1607, 1635
Bst6I CTCTTC 3 cut(s) 46, 723, 1467
BstACI GRCGYC 1 cut(s) 1847
BstBAI YACGTR 1 cut(s) 953
BstC8I GCNNGC 3 cut(s) 73, 1620, 2212
BstDEI CTNAG 7 cut(s) 106, 129, 1007, 1016, 1358, 1685, 1742
BstDSI CCRYGG 1 cut(s) 2069
BstEII GGTNACC 1 cut(s) 196
BstF5I GGATG 3 cut(s) 416, 438, 548
BstKTI GATC 7 cut(s) 328, 358, 442, 692, 1407, 1741, 1813
BstMAI GTCTC 1 cut(s) 1891
BstMBI GATC 7 cut(s) 325, 355, 439, 689, 1404, 1738, 1810
BstMWI GCNNNNNNNGC 2 cut(s) 1387, 1729
BstNSI RCATGY 2 cut(s) 1489, 1622
BstPI GGTNACC 1 cut(s) 196
BstSCI CCNGG 1 cut(s) 1842
BstSFI CTRYAG 3 cut(s) 653, 1603, 1701
BstSLI GKGCMC 2 cut(s) 1532, 1981
BstSNI TACGTA 1 cut(s) 953
BstV1I GCAGC 3 cut(s) 102, 1732, 1744
BstV2I GAAGAC 2 cut(s) 114, 652
BstX2I RGATCY 3 cut(s) 439, 1738, 1810
BstXI CCANNNNNNTGG 2 cut(s) 830, 1505
BstYI RGATCY 3 cut(s) 439, 1738, 1810
BsuI GTATCC 1 cut(s) 1212
BsuRI GGCC 2 cut(s) 1106, 1713
BtgI CCRYGG 1 cut(s) 2069
BtsCI GGATG 3 cut(s) 416, 438, 548
BtsI GCAGTG 1 cut(s) 771
BtsIMutI CAGTG 3 cut(s) 771, 1297, 1431
BveI ACCTGC 1 cut(s) 646
Cac8I GCNNGC 3 cut(s) 73, 1620, 2212
CaiI CAGNNNCTG 1 cut(s) 1735
Cfr13I GGNCC 3 cut(s) 539, 1907, 2126
CseI GACGC 1 cut(s) 1836
Csp6I GTAC 3 cut(s) 1636, 1805, 1891
CspCI CAANNNNNGTGG 2 cut(s) 1083, 1118
CviQI GTAC 3 cut(s) 1636, 1805, 1891
DdeI CTNAG 7 cut(s) 106, 129, 1007, 1016, 1358, 1685, 1742
DpnI GATC 7 cut(s) 327, 357, 441, 691, 1406, 1740, 1812
DpnII GATC 7 cut(s) 325, 355, 439, 689, 1404, 1738, 1810
EaeI YGGCCR 1 cut(s) 1711
Eam1104I CTCTTC 3 cut(s) 46, 723, 1467
EarI CTCTTC 3 cut(s) 46, 723, 1467
EciI GGCGGA 1 cut(s) 1319
Eco105I TACGTA 1 cut(s) 953
Eco130I CCWWGG 4 cut(s) 1669, 2052, 2069, 2130
Eco24I GRGCYC 1 cut(s) 228
Eco32I GATATC 2 cut(s) 706, 982
Eco47I GGWCC 3 cut(s) 539, 1907, 2126
Eco57I CTGAAG 2 cut(s) 1581, 1811
Eco91I GGTNACC 1 cut(s) 196
EcoO65I GGTNACC 1 cut(s) 196
EcoRI GAATTC 3 cut(s) 335, 748, 1345
EcoRV GATATC 2 cut(s) 706, 982
EcoT14I CCWWGG 4 cut(s) 1669, 2052, 2069, 2130
EcoT22I ATGCAT 2 cut(s) 13, 2161
EcoT38I GRGCYC 1 cut(s) 228
ErhI CCWWGG 4 cut(s) 1669, 2052, 2069, 2130
FaqI GGGAC 2 cut(s) 1471, 2112
Fnu4HI GCNGC 3 cut(s) 91, 1721, 1733
FokI GGATG 3 cut(s) 403, 445, 535
FriOI GRGCYC 1 cut(s) 228
Fsp4HI GCNGC 3 cut(s) 91, 1721, 1733
FspBI CTAG 7 cut(s) 323, 368, 507, 1118, 1611, 1670, 2174
GluI GCNGC 3 cut(s) 91, 1721, 1733
GsaI CCCAGC 1 cut(s) 1457
GsuI CTGGAG 2 cut(s) 1527, 1712
HaeIII GGCC 2 cut(s) 1106, 1713
HapII CCGG 3 cut(s) 537, 1761, 1844
HgaI GACGC 1 cut(s) 1836
Hin1I GRCGYC 1 cut(s) 1847
HindIII AAGCTT 1 cut(s) 492
HinfI GANTC 6 cut(s) 292, 1428, 1459, 1878, 1963, 2118
HpaII CCGG 3 cut(s) 537, 1761, 1844
HphI GGTGA 4 cut(s) 190, 781, 989, 1286
Hpy166II GTNNAC 3 cut(s) 458, 1022, 1530
Hpy188I TCNGA 6 cut(s) 432, 747, 924, 974, 1003, 2001
Hpy8I GTNNAC 3 cut(s) 458, 1022, 1530
HpyAV CCTTC 8 cut(s) 161, 395, 576, 610, 896, 1174, 1383, 2139
HpyCH4III ACNGT 3 cut(s) 1292, 1607, 1635
HpyCH4IV ACGT 3 cut(s) 952, 1189, 2201
HpyF10VI GCNNNNNNNGC 2 cut(s) 1387, 1729
HpyF3I CTNAG 7 cut(s) 106, 129, 1007, 1016, 1358, 1685, 1742
HpySE526I ACGT 3 cut(s) 952, 1189, 2201
Hsp92I GRCGYC 1 cut(s) 1847
Kzo9I GATC 7 cut(s) 325, 355, 439, 689, 1404, 1738, 1810
LmnI GCTCC 4 cut(s) 761, 843, 959, 2056
Lsp1109I GCAGC 3 cut(s) 102, 1732, 1744
LweI GCATC 4 cut(s) 1732, 2008, 2032, 2068
MaeI CTAG 7 cut(s) 323, 368, 507, 1118, 1611, 1670, 2174
MaeII ACGT 3 cut(s) 952, 1189, 2201
MaeIII GTNAC 9 cut(s) 196, 210, 399, 521, 579, 671, 1352, 1398, 1673
MalI GATC 7 cut(s) 327, 357, 441, 691, 1406, 1740, 1812
MboI GATC 7 cut(s) 325, 355, 439, 689, 1404, 1738, 1810
MfeI CAATTG 3 cut(s) 160, 824, 1678
MflI RGATCY 3 cut(s) 439, 1738, 1810
MhlI GDGCHC 5 cut(s) 228, 840, 1532, 1981, 2036
MlsI TGGCCA 1 cut(s) 1713
MluNI TGGCCA 1 cut(s) 1713
MlyI GAGTC 2 cut(s) 1453, 2127
MmeI TCCRAC 3 cut(s) 471, 511, 807
Mox20I TGGCCA 1 cut(s) 1713
Mph1103I ATGCAT 2 cut(s) 13, 2161
MroXI GAANNNNTTC 1 cut(s) 63
MscI TGGCCA 1 cut(s) 1713
MseI TTAA 4 cut(s) 711, 1311, 1481, 1863
Msp20I TGGCCA 1 cut(s) 1713
MspA1I CMGCKG 1 cut(s) 1735
MspI CCGG 3 cut(s) 537, 1761, 1844
MspR9I CCNGG 1 cut(s) 1844
MunI CAATTG 3 cut(s) 160, 824, 1678
Mva1269I GAATGC 1 cut(s) 11
MwoI GCNNNNNNNGC 2 cut(s) 1387, 1729
NciI CCSGG 1 cut(s) 1844
NcoI CCATGG 1 cut(s) 2069
NdeII GATC 7 cut(s) 325, 355, 439, 689, 1404, 1738, 1810
NlaIV GGNNCC 4 cut(s) 961, 1978, 2128, 2183
NmeAIII GCCGAG 1 cut(s) 1086
NmuCI GTSAC 2 cut(s) 196, 1673
NsiI ATGCAT 2 cut(s) 13, 2161
NspI RCATGY 2 cut(s) 1489, 1622
PaeI GCATGC 1 cut(s) 1622
PctI GAATGC 1 cut(s) 11
PdmI GAANNNNTTC 1 cut(s) 63
PfeI GAWTC 4 cut(s) 292, 1428, 1878, 1963
PflMI CCANNNNNTGG 1 cut(s) 1735
PkrI GCNGC 3 cut(s) 92, 1722, 1734
PleI GAGTC 2 cut(s) 1453, 2126
PpsI GAGTC 2 cut(s) 1453, 2126
Ppu21I YACGTR 1 cut(s) 953
Psp1406I AACGTT 1 cut(s) 1189
PspEI GGTNACC 1 cut(s) 196
PspFI CCCAGC 1 cut(s) 1453
PspN4I GGNNCC 4 cut(s) 961, 1978, 2128, 2183
PspPI GGNCC 3 cut(s) 539, 1907, 2126
PstI CTGCAG 1 cut(s) 657
PstNI CAGNNNCTG 1 cut(s) 1735
PsuI RGATCY 3 cut(s) 439, 1738, 1810
PvuII CAGCTG 1 cut(s) 1735
RsaI GTAC 3 cut(s) 1637, 1806, 1892
RsaNI GTAC 3 cut(s) 1636, 1805, 1891
SaqAI TTAA 4 cut(s) 711, 1311, 1481, 1863
SatI GCNGC 3 cut(s) 91, 1721, 1733
Sau3AI GATC 7 cut(s) 325, 355, 439, 689, 1404, 1738, 1810
Sau96I GGNCC 3 cut(s) 539, 1907, 2126
SchI GAGTC 2 cut(s) 1453, 2127
ScrFI CCNGG 1 cut(s) 1844
SduI GDGCHC 5 cut(s) 228, 840, 1532, 1981, 2036
SfaNI GCATC 4 cut(s) 1732, 2008, 2032, 2068
SfcI CTRYAG 3 cut(s) 653, 1603, 1701
SinI GGWCC 3 cut(s) 539, 1907, 2126
SmlI CTYRAG 1 cut(s) 1566
SmoI CTYRAG 1 cut(s) 1566
SnaBI TACGTA 1 cut(s) 953
SpeI ACTAGT 1 cut(s) 506
SphI GCATGC 1 cut(s) 1622
SsiI CCGC 1 cut(s) 1304
SspMI CTAG 7 cut(s) 323, 368, 507, 1118, 1611, 1670, 2174
StyD4I CCNGG 1 cut(s) 1842
StyI CCWWGG 4 cut(s) 1669, 2052, 2069, 2130
TaaI ACNGT 3 cut(s) 1292, 1607, 1635
TaiI ACGT 3 cut(s) 955, 1192, 2204
TaqI TCGA 5 cut(s) 184, 360, 1026, 1099, 1385
TatI WGTACW 1 cut(s) 1635
TfiI GAWTC 4 cut(s) 292, 1428, 1878, 1963
Tru1I TTAA 4 cut(s) 711, 1311, 1481, 1863
Tru9I TTAA 4 cut(s) 711, 1311, 1481, 1863
TscAI CASTG 3 cut(s) 771, 1297, 1438
TseFI GTSAC 2 cut(s) 196, 1673
TseI GCWGC 3 cut(s) 90, 1720, 1732
Tsp45I GTSAC 2 cut(s) 196, 1673
TspGWI ACGGA 1 cut(s) 653
TspRI CASTG 3 cut(s) 771, 1297, 1438
Van91I CCANNNNNTGG 1 cut(s) 1735
VneI GTGCAC 1 cut(s) 1528
VpaK11BI GGWCC 3 cut(s) 539, 1907, 2126
XapI RAATTY 8 cut(s) 335, 499, 748, 777, 1140, 1345, 1511, 2064
XbaI TCTAGA 2 cut(s) 322, 1117
XceI RCATGY 2 cut(s) 1489, 1622
XmaJI CCTAGG 1 cut(s) 1669
XmnI GAANNNNTTC 1 cut(s) 63
XspI CTAG 7 cut(s) 323, 368, 507, 1118, 1611, 1670, 2174
Zsp2I ATGCAT 2 cut(s) 13, 2161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.