Ribonuclease H
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 72 |
| AfaI | GTAC | 1 cut(s) | 292 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 294 |
| AjnI | CCWGG | 1 cut(s) | 341 |
| AluBI | AGCT | 2 cut(s) | 28, 173 |
| AluI | AGCT | 2 cut(s) | 28, 173 |
| Alw26I | GTCTC | 1 cut(s) | 175 |
| ApoI | RAATTY | 1 cut(s) | 72 |
| AsuHPI | GGTGA | 1 cut(s) | 62 |
| BccI | CCATC | 2 cut(s) | 171, 350 |
| BciT130I | CCWGG | 1 cut(s) | 343 |
| BcoDI | GTCTC | 1 cut(s) | 175 |
| BfaI | CTAG | 1 cut(s) | 174 |
| Bme1390I | CCNGG | 1 cut(s) | 343 |
| BmrFI | CCNGG | 1 cut(s) | 343 |
| BpmI | CTGGAG | 1 cut(s) | 364 |
| BsaJI | CCNNGG | 1 cut(s) | 276 |
| BsaWI | WCCGGW | 1 cut(s) | 287 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 294 |
| BseBI | CCWGG | 1 cut(s) | 343 |
| BseDI | CCNNGG | 1 cut(s) | 276 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 294 |
| BsiSI | CCGG | 1 cut(s) | 288 |
| BslFI | GGGAC | 2 cut(s) | 104, 257 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 294 |
| BsmAI | GTCTC | 1 cut(s) | 175 |
| BsmFI | GGGAC | 2 cut(s) | 104, 257 |
| BssECI | CCNNGG | 1 cut(s) | 276 |
| BssT1I | CCWWGG | 1 cut(s) | 276 |
| Bst2UI | CCWGG | 1 cut(s) | 343 |
| Bst4CI | ACNGT | 1 cut(s) | 97 |
| BstC8I | GCNNGC | 1 cut(s) | 165 |
| BstDEI | CTNAG | 1 cut(s) | 108 |
| BstMAI | GTCTC | 1 cut(s) | 175 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 164 |
| BstNI | CCWGG | 1 cut(s) | 343 |
| BstSCI | CCNGG | 1 cut(s) | 341 |
| BtsIMutI | CAGTG | 1 cut(s) | 93 |
| Cac8I | GCNNGC | 1 cut(s) | 165 |
| Csp6I | GTAC | 1 cut(s) | 291 |
| CviAII | CATG | 2 cut(s) | 294, 311 |
| CviJI | RGCY | 7 cut(s) | 28, 123, 158, 173, 212, 317, 336 |
| CviKI_1 | RGCY | 7 cut(s) | 28, 123, 158, 173, 212, 317, 336 |
| CviQI | GTAC | 1 cut(s) | 291 |
| DdeI | CTNAG | 1 cut(s) | 108 |
| Eco130I | CCWWGG | 1 cut(s) | 276 |
| EcoRII | CCWGG | 1 cut(s) | 341 |
| EcoT14I | CCWWGG | 1 cut(s) | 276 |
| ErhI | CCWWGG | 1 cut(s) | 276 |
| FaeI | CATG | 2 cut(s) | 297, 314 |
| FaiI | YATR | 8 cut(s) | 8, 10, 83, 149, 161, 267, 295, 312 |
| FaqI | GGGAC | 2 cut(s) | 104, 257 |
| FatI | CATG | 2 cut(s) | 293, 310 |
| FspBI | CTAG | 1 cut(s) | 174 |
| GsuI | CTGGAG | 1 cut(s) | 364 |
| HapII | CCGG | 1 cut(s) | 288 |
| Hin1II | CATG | 2 cut(s) | 297, 314 |
| HinfI | GANTC | 4 cut(s) | 151, 183, 197, 260 |
| HpaII | CCGG | 1 cut(s) | 288 |
| HphI | GGTGA | 1 cut(s) | 62 |
| Hpy188III | TCNNGA | 1 cut(s) | 201 |
| Hpy99I | CGWCG | 1 cut(s) | 62 |
| HpyAV | CCTTC | 1 cut(s) | 245 |
| HpyCH4III | ACNGT | 1 cut(s) | 97 |
| HpyCH4V | TGCA | 1 cut(s) | 167 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 164 |
| HpyF3I | CTNAG | 1 cut(s) | 108 |
| Hsp92II | CATG | 2 cut(s) | 297, 314 |
| LpnPI | CCDG | 5 cut(s) | 140, 186, 301, 328, 355 |
| MaeI | CTAG | 1 cut(s) | 174 |
| MaeIII | GTNAC | 1 cut(s) | 50 |
| MboII | GAAGA | 2 cut(s) | 79, 314 |
| MluCI | AATT | 3 cut(s) | 72, 85, 216 |
| MlyI | GAGTC | 2 cut(s) | 177, 254 |
| MmeI | TCCRAC | 1 cut(s) | 331 |
| MseI | TTAA | 2 cut(s) | 132, 327 |
| MslI | CAYNNNNRTG | 1 cut(s) | 192 |
| MspI | CCGG | 1 cut(s) | 288 |
| MspR9I | CCNGG | 1 cut(s) | 343 |
| MvaI | CCWGG | 1 cut(s) | 343 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 164 |
| NlaIII | CATG | 2 cut(s) | 297, 314 |
| NmuCI | GTSAC | 1 cut(s) | 50 |
| PfeI | GAWTC | 2 cut(s) | 151, 197 |
| PleI | GAGTC | 2 cut(s) | 177, 254 |
| PpsI | GAGTC | 2 cut(s) | 177, 254 |
| Psp6I | CCWGG | 1 cut(s) | 341 |
| PspGI | CCWGG | 1 cut(s) | 341 |
| RsaI | GTAC | 1 cut(s) | 292 |
| RsaNI | GTAC | 1 cut(s) | 291 |
| RseI | CAYNNNNRTG | 1 cut(s) | 192 |
| SaqAI | TTAA | 2 cut(s) | 132, 327 |
| SchI | GAGTC | 2 cut(s) | 177, 254 |
| ScrFI | CCNGG | 1 cut(s) | 343 |
| SetI | ASST | 4 cut(s) | 30, 175, 237, 344 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 192 |
| Sse9I | AATT | 3 cut(s) | 72, 85, 216 |
| SspMI | CTAG | 1 cut(s) | 174 |
| StyD4I | CCNGG | 1 cut(s) | 341 |
| StyI | CCWWGG | 1 cut(s) | 276 |
| TaaI | ACNGT | 1 cut(s) | 97 |
| TasI | AATT | 3 cut(s) | 72, 85, 216 |
| TfiI | GAWTC | 2 cut(s) | 151, 197 |
| Tru1I | TTAA | 2 cut(s) | 132, 327 |
| Tru9I | TTAA | 2 cut(s) | 132, 327 |
| TscAI | CASTG | 1 cut(s) | 100 |
| TseFI | GTSAC | 1 cut(s) | 50 |
| Tsp45I | GTSAC | 1 cut(s) | 50 |
| TspDTI | ATGAA | 3 cut(s) | 65, 164, 299 |
| TspRI | CASTG | 1 cut(s) | 100 |
| XapI | RAATTY | 1 cut(s) | 72 |
| XspI | CTAG | 1 cut(s) | 174 |