Rmu_sc0004059.1_g000018

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004059.1
OG0000041
Physical Location & Seq
Reverse (-)
72157 .. 73917
1761 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004059.1_g000018.1.cds

Sequence Viewer

Length: 1761 bp
atgcgccttccccaaacccctcagccgttactacatcagaactccgattggctcgcagaccttaccttctccggcctctctccgggctctgtcaaggtattggtggtgacgccggctttggtgttatccgcccttccaccgggaagcggcggagcttgtgattcccaaatgctacaaaggaaacgaactaagaatggtggagatatcactacggatcttgaagcccttcacatggaggaccttgattctactatcaaggctggtctccctcacttctctgatgcgagctatgctagtaagctcaaaaacccagtcgatcgctacagtaagacgatgatggaggatttcgagttcaccaatgaggactgttcctacacccaaggcaagcacggccagaatatctctttctcagagaaggtacacaacaaacttgattatgattggcattgtgctgtggtggttaagctcatggataaaccaaactctacaaactcttttgatttcatgcttaaggggttaagaagaaagtggcaagtcaaagggggctggcaattaattgatctgcctaacgatttcttcattgttaagttcaacttagaggaagatatgaaccatgttctctgcggtggaccttggattttggctgggcagaccttaattgttaggaaatggaggcctgattttgaccctatgagtgagataattggtaaaatggctttatgggttagaatctgtggtctacctgtgaaatacttcaaggattacactgttggtaaaatagggaaaatgcttggtgatgttgttaaggtagatcaggtcactataggccaagatagagggaaatttgcccgagtctgtattgaaattgatcttaacaaacttcttaggccttttgttgaagtggaatctgtgacttacaatgttatatatgagggaatctctctaatatgctttgaatgtggttgttatggttatgccaaggataagtgcccttctattgttattgcccctagtgctccaaaccctgttaacaacattaatgatcacatcatggattctgctgaaaatgagggtttaaggcatgactctgatggccatgatgatcaggtttctgtgattaaggaagatatgggtccctggatgcttatgaacaataggaataagaagaaaagtattgaggctaatggtcctaagaaaaatgccaacaagagctctaggttcacagtgctgcaagatgaggctgctcctattgatgctgaacctgagactatccataacacttctgtaaaaacatcaactgtccccattgtgaaactctggaccagcttccaagagaaggagaagagtctgaataaggccacccctgccaaacctggctcgtctactgcttctaatgttactggtattggtacttctgcatctgaaagcctaaagactggtcctagagtcccaatgaaagatgtatctaatgttgagagcagcagtggctccaaaactactatgcaatatcaaagaaaatctaaaggtattatctcttctgttgccaaacaccagcctaacgttttcaaaaagctttcctttgaaaatgttgataatgtgtttgggaatggaatttctgcaatttttggtcactaccctcctaaggagagtatgttggaagctagaactgaatcatctatttctcaggcctctgattgttttgttgagaagacctttgctaacaatagcaatttgaccgatcatgacaaccagccttcctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

586

Amino Acids

64.94

Weight (kDa)

6.71

Isoelectric Point (pI)

39.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01050
fragaria_vesca FvH4_1g24181 FvH4_1g28741 FvH4_1g29781 FvH4_2g00621 FvH4_2g04885 FvH4_2g11953 FvH4_2g11954 FvH4_2g12001 FvH4_2g12002 FvH4_2g12222 FvH4_2g12223 FvH4_2g38351 FvH4_3g04401 FvH4_3g31330 FvH4_3g33091 FvH4_4g11461 FvH4_5g27993 FvH4_5g27994 FvH4_5g28072 FvH4_5g28231 FvH4_5g28591 FvH4_5g34261 FvH4_6g18162 FvH4_6g25500 FvH4_6g25561 FvH4_6g25792 FvH4_6g27602 FvH4_6g46881
malus_domestica MD03G1019700.v1.1
prunus_persica Prupe.1G055400_v2.0.a1 Prupe.1G179200_v2.0.a1 Prupe.1G208200_v2.0.a1 Prupe.1G231200_v2.0.a1 Prupe.2G044900_v2.0.a1 Prupe.2G055100_v2.0.a1 Prupe.2G097600_v2.0.a1 Prupe.2G114200_v2.0.a1 Prupe.3G109000_v2.0.a1 Prupe.3G109300_v2.0.a1 Prupe.3G109600_v2.0.a1 Prupe.4G246900_v2.0.a1 Prupe.5G026400_v2.0.a1
pyrus_communis pycom05g17130 pycom07g06820 pycom07g18590 pycom07g22730 pycom12401g00120 pycom12401g00180 pycom420g00470
rosa_chinensis RchiOBHm_Chr1g0342591 RchiOBHm_Chr1g0342601 RchiOBHm_Chr1g0342611 RchiOBHm_Chr1g0351011 RchiOBHm_Chr2g0146151 RchiOBHm_Chr2g0171821 RchiOBHm_Chr3g0492921 RchiOBHm_Chr3g0492931 RchiOBHm_Chr4g0406871 RchiOBHm_Chr4g0426311 RchiOBHm_Chr5g0020721 RchiOBHm_Chr5g0050111 RchiOBHm_Chr5g0051681 RchiOBHm_Chr5g0053531 RchiOBHm_Chr5g0054841 RchiOBHm_Chr5g0055061 RchiOBHm_Chr5g0055071 RchiOBHm_Chr6g0248911 RchiOBHm_Chr6g0291741 RchiOBHm_Chr7g0187781 RchiOBHm_Chr7g0220081 RchiOBHm_Chr7g0224391 RchiOBHm_Chr7g0235221
rosa_laevigata RLG00000002133 RLG00000002402 RLG00000002736 RLG00000011046 RLG00000013214 RLG00000016550 RLG00000021669 RLG00000022948 RLG00000023691 RLG00000024682 RLG00000027826 RLG00000029734 RLG00000029831 RLG00000030305 RLG00000037042
rosa_multiflora Rmu_co7992532.1_g000001 Rmu_co8021462.1_g000001 Rmu_co8229237.1_g000001 Rmu_co8281571.1_g000001 Rmu_co8326451.1_g000001 Rmu_co8359553.1_g000001 Rmu_co8372117.1_g000001 Rmu_co8427177.1_g000001 Rmu_co8474063.1_g000002 Rmu_sc0000007.1_g000020 Rmu_sc0000173.1_g000002 Rmu_sc0000367.1_g000086 Rmu_sc0000367.1_g000088 Rmu_sc0000559.1_g000002 Rmu_sc0000733.1_g000014 Rmu_sc0000745.1_g000006 Rmu_sc0000791.1_g000046 Rmu_sc0000791.1_g000049 Rmu_sc0000824.1_g000010 Rmu_sc0000824.1_g000011 Rmu_sc0000834.1_g000009 Rmu_sc0000834.1_g000011 Rmu_sc0000911.1_g000020 Rmu_sc0000935.1_g000034 Rmu_sc0000935.1_g000051 Rmu_sc0000935.1_g000053 Rmu_sc0001000.1_g000005 Rmu_sc0001000.1_g000006 Rmu_sc0001150.1_g000004 Rmu_sc0001227.1_g000002 Rmu_sc0001322.1_g000018 Rmu_sc0001343.1_g000001 Rmu_sc0001356.1_g000004 Rmu_sc0001356.1_g000005 Rmu_sc0001363.1_g000007 Rmu_sc0001463.1_g000012 Rmu_sc0001484.1_g000023 Rmu_sc0001516.1_g000003 Rmu_sc0001516.1_g000005 Rmu_sc0001619.1_g000005 Rmu_sc0001648.1_g000032 Rmu_sc0001648.1_g000035 Rmu_sc0001694.1_g000008 Rmu_sc0001809.1_g000023 Rmu_sc0002093.1_g000027 Rmu_sc0002231.1_g000004 Rmu_sc0002245.1_g000001 Rmu_sc0002245.1_g000003 Rmu_sc0002354.1_g000045 Rmu_sc0002354.1_g000048 Rmu_sc0002368.1_g000014 Rmu_sc0002368.1_g000016 Rmu_sc0002368.1_g000017 Rmu_sc0002401.1_g000030 Rmu_sc0002487.1_g000012 Rmu_sc0002798.1_g000028 Rmu_sc0002923.1_g000012 Rmu_sc0002960.1_g000002 Rmu_sc0003033.1_g000072 Rmu_sc0003133.1_g000015 Rmu_sc0003168.1_g000007 Rmu_sc0003945.1_g000002 Rmu_sc0003945.1_g000004 Rmu_sc0003945.1_g000005 Rmu_sc0003979.1_g000004 Rmu_sc0004005.1_g000007 Rmu_sc0004059.1_g000018 Rmu_sc0004064.1_g000001 Rmu_sc0004083.1_g000007 Rmu_sc0004083.1_g000008 Rmu_sc0004354.1_g000033 Rmu_sc0004368.1_g000035 Rmu_sc0004483.1_g000032 Rmu_sc0004646.1_g000012 Rmu_sc0005014.1_g000006 Rmu_sc0005016.1_g000046 Rmu_sc0005016.1_g000051 Rmu_sc0005033.1_g000005 Rmu_sc0005033.1_g000007 Rmu_sc0005065.1_g000002 Rmu_sc0005065.1_g000004 Rmu_sc0005168.1_g000012 Rmu_sc0005238.1_g000001 Rmu_sc0005365.1_g000012 Rmu_sc0005631.1_g000005 Rmu_sc0005704.1_g000013 Rmu_sc0005704.1_g000014 Rmu_sc0005781.1_g000030 Rmu_sc0005789.1_g000016 Rmu_sc0006185.1_g000001 Rmu_sc0006185.1_g000002 Rmu_sc0006266.1_g000044 Rmu_sc0006561.1_g000018 Rmu_sc0006695.1_g000016 Rmu_sc0007739.1_g000022 Rmu_sc0008050.1_g000013 Rmu_sc0008169.1_g000006 Rmu_sc0008855.1_g000006 Rmu_sc0009298.1_g000002 Rmu_sc0009495.1_g000005 Rmu_sc0010608.1_g000003 Rmu_sc0010958.1_g000005 Rmu_sc0011506.1_g000001 Rmu_sc0011790.1_g000002 Rmu_sc0011790.1_g000003 Rmu_sc0012042.1_g000004 Rmu_sc0012042.1_g000005 Rmu_sc0012140.1_g000020 Rmu_sc0012726.1_g000005 Rmu_sc0012746.1_g000023 Rmu_sc0013193.1_g000002 Rmu_sc0013193.1_g000003 Rmu_sc0017997.1_g000001 Rmu_sc0021401.1_g000001 Rmu_sc0025959.1_g000001 Rmu_sc0026403.1_g000003 Rmu_sc0028616.1_g000002 Rmu_sc0029801.1_g000002 Rmu_sc0032453.1_g000001 Rmu_sc0033672.1_g000002 Rmu_sc0034553.1_g000001 Rmu_sc0036883.1_g000001 Rmu_ssc0000096.1_g000001 Rmu_ssc0000158.1_g000031 Rmu_ssc0000291.1_g000034 Rmu_ssc0000381.1_g000026 Rmu_ssc0000387.1_g000010 Rmu_ssc0000474.1_g000002 Rmu_ssc0000474.1_g000004
rosa_roxburghii Rroxscaffold_1G00020090 Rroxscaffold_1G00020100 Rroxscaffold_1G00022940 Rroxscaffold_1G00044600 Rroxscaffold_1G00054420 Rroxscaffold_1G00054430 Rroxscaffold_1G00056440 Rroxscaffold_2G00090180 Rroxscaffold_2G00101250 Rroxscaffold_2G00110600 Rroxscaffold_2G00152800 Rroxscaffold_4G00320370 Rroxscaffold_4G00320640 Rroxscaffold_4G00322420 Rroxscaffold_4G00324670 Rroxscaffold_5G00332760 Rroxscaffold_5G00345010 Rroxscaffold_5G00345020 Rroxscaffold_5G00355470 Rroxscaffold_5G00385520 Rroxscaffold_6G00394610 Rroxscaffold_6G00394700 Rroxscaffold_7G00164190 Rroxscaffold_7G00182750 Rroxscaffold_7G00183540 Rroxscaffold_7G00203520 Rroxscaffold_7G00211630
rosa_rugosa Rorug01G0041400 Rorug01G0041500 Rorug01G0065300 Rorug01G0065300 Rorug01G0069700 Rorug01G0069800 Rorug01G0070300 Rorug01G0072300 Rorug01G0072900 Rorug01G0093100 Rorug01G0147100.1 Rorug01G0196900 Rorug01G0259700 Rorug02G0162000 Rorug02G0182700 Rorug02G0212300 Rorug02G0214700 Rorug02G0229900 Rorug02G0246100 Rorug02G0257400 Rorug02G0259100 Rorug02G0341400 Rorug02G0341500 Rorug02G0341700 Rorug02G0341800 Rorug02G0355600 Rorug02G0386100 Rorug02G0386100 Rorug02G0387000 Rorug02G0387100 Rorug02G0388400 Rorug02G0388500 Rorug02G0429100 Rorug02G0429100 Rorug02G0455300 Rorug02G0634400 Rorug03G0163200 Rorug03G0198500 Rorug03G0199600 Rorug03G0204000 Rorug03G0265600 Rorug03G0266100 Rorug03G0266200 Rorug03G0280600 Rorug03G0348200 Rorug03G0349700 Rorug03G0349800 Rorug04G0020200 Rorug04G0073700 Rorug04G0215000 Rorug04G0426100 Rorug05G0064200 Rorug05G0064300 Rorug05G0265700 Rorug05G0287400 Rorug05G0287500 Rorug05G0287500 Rorug05G0405000 Rorug05G0525700 Rorug05G0525800 Rorug05G0588200 Rorug06G0038200 Rorug06G0057900 Rorug06G0058000 Rorug06G0058500 Rorug06G0058600 Rorug06G0116700 Rorug06G0159300.1 Rorug06G0159400 Rorug06G0174700 Rorug06G0375500 Rorug07G0091400 Rorug07G0094900 Rorug07G0108100 Rorug07G0140700 Rorug07G0140700 Rorug07G0207100 Rorug07G0207100 Rorug07G0207200 Rorug07G0287300
rosa_samantha Rh1AG100100 Rh1AG104500 Rh1BG150700 Rh1BG237700 Rh1BG334000 Rh1CG090000 Rh1CG100100 Rh1CG347300 Rh1DG090500 Rh1DG096100 Rh1DG107400 Rh1DG182500 Rh1DG265700 Rh1DG365200 Rh2BG256800 Rh2BG361300 Rh2BG468600 Rh2BG549800 Rh2CG270900 Rh2DG276700 Rh2DG276800 Rh2DG377700 Rh2DG477900 Rh3AG161200 Rh3BG138800 Rh3BG185700 Rh3BG269600 Rh3CG176000 Rh4AG006100 Rh4AG216700 Rh4AG355800 Rh4CG108600 Rh5AG141700 Rh5AG480000 Rh5BG014500 Rh5BG134600 Rh5BG295400 Rh5BG552900 Rh5CG058600 Rh5CG286400 Rh5CG350900 Rh5CG575800 Rh5DG004300 Rh5DG254600 Rh5DG356500 Rh6AG106500 Rh6AG191100 Rh6AG224700 Rh6BG074700 Rh6BG181400 Rh6BG352200 Rh6BG408400 Rh6BG453600 Rh6CG047400 Rh6CG172200 Rh6CG189400 Rh6CG515800 Rh6DG042900 Rh6DG163400 Rh7AG089300 Rh7AG227400 Rh7AG275600 Rh7AG375100 Rh7AG460900 Rh7AG485200 Rh7BG146100 Rh7BG354300 Rh7CG077100 Rh7CG294500 Rh7CG393800 Rh7DG041700 Rh7DG062700 Rh7DG091700 Rh7DG178900 Rh7DG192300 Rh7DG297000 Rh7DG403600 Rh7DG411800
rosa_wichuraiana Rw0G007100 Rw0G011430 Rw1G003580 Rw1G004040 Rw1G005880 Rw1G009860 Rw1G009990 Rw1G012190 Rw1G012200 Rw1G013740 Rw1G013750 Rw1G016710 Rw1G021050 Rw2G023790 Rw2G028810 Rw2G035890 Rw2G036250 Rw4G008880 Rw4G014380 Rw4G014390 Rw4G016020 Rw4G037160 Rw5G010060 Rw5G030620 Rw5G033840 Rw5G049840 Rw5G049850 Rw6G003450 Rw6G015080 Rw7G019640 Rw7G024060 Rw7G024070 Rw7G029090 Rw7G037010 Rw7G039170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 739, 1382
AciI CCGC 4 cut(s) 129, 147, 150, 624
AclI AACGTT 1 cut(s) 1560
AclWI GGATC 1 cut(s) 222
AcoI YGGCCR 2 cut(s) 391, 1093
AcsI RAATTY 2 cut(s) 842, 1611
AcyI GRCGYC 1 cut(s) 110
AfaI GTAC 2 cut(s) 420, 1411
AfiI CCNNNNNNNGG 6 cut(s) 82, 139, 146, 232, 1336, 1642
AflII CTTAAG 1 cut(s) 509
AgsI TTSAA 8 cut(s) 221, 592, 757, 863, 899, 956, 1567, 1583
AjnI CCWGG 2 cut(s) 1136, 1372
AloI GAACNNNNNNTCC 2 cut(s) 335, 367
AluBI AGCT 8 cut(s) 155, 288, 301, 466, 1212, 1326, 1573, 1661
AluI AGCT 8 cut(s) 155, 288, 301, 466, 1212, 1326, 1573, 1661
Alw21I GWGCWC 2 cut(s) 1018, 1214
Alw26I GTCTC 2 cut(s) 269, 1259
AlwI GGATC 1 cut(s) 222
Ama87I CYCGRG 1 cut(s) 849
AoxI GGCC 8 cut(s) 73, 391, 674, 826, 887, 1093, 1356, 1686
ApeKI GCWGC 3 cut(s) 1228, 1241, 1479
ApoI RAATTY 2 cut(s) 842, 1611
ArsI GACNNNNNNTTYG 4 cut(s) 100, 132, 297, 329
AseI ATTAAT 2 cut(s) 554, 1038
Asp700I GAANNNNTTC 2 cut(s) 225, 752
AspLEI GCGC 1 cut(s) 6
AspS9I GGNCC 6 cut(s) 238, 629, 1133, 1187, 1320, 1439
AsuC2I CCSGG 2 cut(s) 84, 141
AsuHPI GGTGA 3 cut(s) 118, 346, 806
AvaI CYCGRG 1 cut(s) 849
AvaII GGWCC 6 cut(s) 238, 629, 1133, 1187, 1320, 1439
AxyI CCTNAGG 1 cut(s) 1641
BaeGI GKGCMC 1 cut(s) 992
BalI TGGCCA 1 cut(s) 1095
BanII GRGCYC 2 cut(s) 89, 1214
BarI GAAGNNNNNNTAC 4 cut(s) 1396, 1428, 1519, 1551
BbsI GAAGAC 1 cut(s) 1715
Bbv12I GWGCWC 2 cut(s) 1018, 1214
BbvCI CCTCAGC 1 cut(s) 21
BbvI GCAGC 3 cut(s) 1215, 1228, 1491
BccI CCATC 2 cut(s) 331, 1085
BceAI ACGGC 2 cut(s) 10, 406
BciT130I CCWGG 2 cut(s) 1138, 1374
BclI TGATCA 2 cut(s) 1042, 1102
BcnI CCSGG 2 cut(s) 84, 141
BcoDI GTCTC 2 cut(s) 269, 1259
BfaI CTAG 5 cut(s) 294, 1011, 1215, 1443, 1662
BfmI CTRYAG 2 cut(s) 322, 822
BfrI CTTAAG 1 cut(s) 509
BisI GCNGC 4 cut(s) 148, 1229, 1242, 1480
BlsI GCNGC 4 cut(s) 149, 1230, 1243, 1481
Bme1390I CCNGG 4 cut(s) 84, 141, 1138, 1374
Bme18I GGWCC 6 cut(s) 238, 629, 1133, 1187, 1320, 1439
BmeT110I CYCGRG 1 cut(s) 849
BmgT120I GGNCC 6 cut(s) 238, 629, 1133, 1187, 1320, 1439
BmiI GGNNCC 3 cut(s) 1134, 1135, 1489
BmrFI CCNGG 4 cut(s) 84, 141, 1138, 1374
BmrI ACTGGG 1 cut(s) 305
BmsI GCATC 4 cut(s) 271, 1131, 1243, 1427
BmuI ACTGGG 1 cut(s) 305
BpiI GAAGAC 1 cut(s) 1715
BplI GAGNNNNNCTC 2 cut(s) 923, 955
Bpu10I CCTNAGC 1 cut(s) 21
BpuMI CCSGG 2 cut(s) 84, 141
BsaHI GRCGYC 1 cut(s) 110
BsaI GGTCTC 1 cut(s) 269
BsaJI CCNNGG 4 cut(s) 379, 632, 978, 1136
BsaXI ACNNNNNCTCC 2 cut(s) 1637, 1667
Bsc4I CCNNNNNNNGG 6 cut(s) 82, 139, 146, 232, 1336, 1642
Bse118I RCCGGY 1 cut(s) 112
Bse1I ACTGG 3 cut(s) 311, 1405, 1441
Bse21I CCTNAGG 1 cut(s) 1641
BseBI CCWGG 2 cut(s) 1138, 1374
BseDI CCNNGG 4 cut(s) 379, 632, 978, 1136
BseGI GGATG 1 cut(s) 1146
BseLI CCNNNNNNNGG 6 cut(s) 82, 139, 146, 232, 1336, 1642
BseMII CTCAG 4 cut(s) 35, 423, 1254, 1697
BseNI ACTGG 3 cut(s) 311, 1405, 1441
BseSI GKGCMC 1 cut(s) 992
BseXI GCAGC 3 cut(s) 1215, 1228, 1491
BseYI CCCAGC 1 cut(s) 644
Bsh1285I CGRYCG 1 cut(s) 319
BshFI GGCC 8 cut(s) 75, 393, 676, 828, 889, 1095, 1358, 1688
BsiEI CGRYCG 1 cut(s) 319
BsiHKAI GWGCWC 2 cut(s) 1018, 1214
BsiHKCI CYCGRG 1 cut(s) 849
BsiSI CCGG 4 cut(s) 72, 83, 113, 140
BslFI GGGAC 3 cut(s) 1119, 1286, 1433
BslI CCNNNNNNNGG 6 cut(s) 82, 139, 146, 232, 1336, 1642
BsmAI GTCTC 2 cut(s) 269, 1259
BsmFI GGGAC 3 cut(s) 1119, 1286, 1433
BsnI GGCC 8 cut(s) 75, 393, 676, 828, 889, 1095, 1358, 1688
Bso31I GGTCTC 1 cut(s) 269
BsoBI CYCGRG 1 cut(s) 849
Bsp1286I GDGCHC 4 cut(s) 89, 992, 1018, 1214
Bsp143I GATC 8 cut(s) 214, 316, 559, 811, 868, 1042, 1102, 1738
BspACI CCGC 4 cut(s) 129, 147, 150, 624
BspANI GGCC 8 cut(s) 75, 393, 676, 828, 889, 1095, 1358, 1688
BspCNI CTCAG 4 cut(s) 34, 422, 1255, 1696
BspHI TCATGA 1 cut(s) 1741
BspLI GGNNCC 3 cut(s) 1134, 1135, 1489
BspPI GGATC 1 cut(s) 222
BspTI CTTAAG 1 cut(s) 509
BspTNI GGTCTC 1 cut(s) 269
BsrFI RCCGGY 1 cut(s) 112
BsrI ACTGG 3 cut(s) 311, 1405, 1441
BssAI RCCGGY 1 cut(s) 112
BssECI CCNNGG 4 cut(s) 379, 632, 978, 1136
BssMI GATC 8 cut(s) 214, 316, 559, 811, 868, 1042, 1102, 1738
BssNI GRCGYC 1 cut(s) 110
BssT1I CCWWGG 3 cut(s) 379, 632, 978
Bst2UI CCWGG 2 cut(s) 1138, 1374
Bst4CI ACNGT 5 cut(s) 326, 368, 769, 1225, 1300
Bst6I CTCTTC 2 cut(s) 1337, 1540
BstACI GRCGYC 1 cut(s) 110
BstAFI CTTAAG 1 cut(s) 509
BstC8I GCNNGC 5 cut(s) 54, 114, 286, 386, 548
BstDEI CTNAG 9 cut(s) 21, 189, 409, 595, 884, 1191, 1263, 1641, 1683
BstF5I GGATG 1 cut(s) 1146
BstHHI GCGC 1 cut(s) 6
BstKTI GATC 8 cut(s) 217, 319, 562, 814, 871, 1045, 1105, 1741
BstMAI GTCTC 2 cut(s) 269, 1259
BstMBI GATC 8 cut(s) 214, 316, 559, 811, 868, 1042, 1102, 1738
BstMCI CGRYCG 1 cut(s) 319
BstMWI GCNNNNNNNGC 5 cut(s) 290, 390, 1013, 1364, 1485
BstNI CCWGG 2 cut(s) 1138, 1374
BstSCI CCNGG 4 cut(s) 82, 139, 1136, 1372
BstSFI CTRYAG 2 cut(s) 322, 822
BstSLI GKGCMC 1 cut(s) 992
BstV1I GCAGC 3 cut(s) 1215, 1228, 1491
BstV2I GAAGAC 1 cut(s) 1715
BstX2I RGATCY 1 cut(s) 214
BstYI RGATCY 1 cut(s) 214
Bsu36I CCTNAGG 1 cut(s) 1641
BsuRI GGCC 8 cut(s) 75, 393, 676, 828, 889, 1095, 1358, 1688
BtsCI GGATG 1 cut(s) 1146
BtsI GCAGTG 1 cut(s) 1489
BtsIMutI CAGTG 3 cut(s) 765, 1230, 1489
Cac8I GCNNGC 5 cut(s) 54, 114, 286, 386, 548
CciI TCATGA 1 cut(s) 1741
CfoI GCGC 1 cut(s) 6
Cfr10I RCCGGY 1 cut(s) 112
Cfr13I GGNCC 6 cut(s) 238, 629, 1133, 1187, 1320, 1439
CseI GACGC 1 cut(s) 118
Csp6I GTAC 2 cut(s) 419, 1410
CviAII CATG 8 cut(s) 232, 469, 505, 614, 1051, 1082, 1097, 1742
CviQI GTAC 2 cut(s) 419, 1410
DdeI CTNAG 9 cut(s) 21, 189, 409, 595, 884, 1191, 1263, 1641, 1683
DpnI GATC 8 cut(s) 216, 318, 561, 813, 870, 1044, 1104, 1740
DpnII GATC 8 cut(s) 214, 316, 559, 811, 868, 1042, 1102, 1738
EaeI YGGCCR 2 cut(s) 391, 1093
Eam1104I CTCTTC 2 cut(s) 1337, 1540
EarI CTCTTC 2 cut(s) 1337, 1540
EciI GGCGGA 2 cut(s) 118, 165
Ecl136II GAGCTC 1 cut(s) 1212
Eco130I CCWWGG 3 cut(s) 379, 632, 978
Eco147I AGGCCT 3 cut(s) 676, 889, 1688
Eco24I GRGCYC 2 cut(s) 89, 1214
Eco31I GGTCTC 1 cut(s) 269
Eco32I GATATC 1 cut(s) 205
Eco47I GGWCC 6 cut(s) 238, 629, 1133, 1187, 1320, 1439
Eco53kI GAGCTC 1 cut(s) 1212
Eco81I CCTNAGG 1 cut(s) 1641
Eco88I CYCGRG 1 cut(s) 849
EcoICRI GAGCTC 1 cut(s) 1212
EcoO109I RGGNCCY 2 cut(s) 238, 1133
EcoRII CCWGG 2 cut(s) 1136, 1372
EcoRV GATATC 1 cut(s) 205
EcoT14I CCWWGG 3 cut(s) 379, 632, 978
EcoT38I GRGCYC 2 cut(s) 89, 1214
ErhI CCWWGG 3 cut(s) 379, 632, 978
FaeI CATG 8 cut(s) 235, 472, 508, 617, 1054, 1085, 1100, 1745
FalI AAGNNNNNCTT 4 cut(s) 578, 610, 1562, 1594
FaqI GGGAC 3 cut(s) 1119, 1286, 1433
FatI CATG 8 cut(s) 231, 468, 504, 613, 1050, 1081, 1096, 1741
FbaI TGATCA 2 cut(s) 1042, 1102
FblI GTMKAC 2 cut(s) 739, 1382
Fnu4HI GCNGC 4 cut(s) 148, 1229, 1242, 1480
FokI GGATG 1 cut(s) 1153
FriOI GRGCYC 2 cut(s) 89, 1214
Fsp4HI GCNGC 4 cut(s) 148, 1229, 1242, 1480
FspBI CTAG 5 cut(s) 294, 1011, 1215, 1443, 1662
GlaI GCGC 1 cut(s) 5
GluI GCNGC 4 cut(s) 148, 1229, 1242, 1480
GsaI CCCAGC 1 cut(s) 648
HaeIII GGCC 8 cut(s) 75, 393, 676, 828, 889, 1095, 1358, 1688
HapII CCGG 4 cut(s) 72, 83, 113, 140
HgaI GACGC 1 cut(s) 118
HhaI GCGC 1 cut(s) 6
Hin1I GRCGYC 1 cut(s) 110
Hin1II CATG 8 cut(s) 235, 472, 508, 617, 1054, 1085, 1100, 1745
Hin6I GCGC 1 cut(s) 4
HinP1I GCGC 1 cut(s) 4
HincII GTYRAC 1 cut(s) 1030
HindII GTYRAC 1 cut(s) 1030
HindIII AAGCTT 1 cut(s) 1571
HpaI GTTAAC 1 cut(s) 1030
HpaII CCGG 4 cut(s) 72, 83, 113, 140
HphI GGTGA 3 cut(s) 118, 346, 806
Hpy166II GTNNAC 7 cut(s) 354, 421, 629, 740, 1030, 1221, 1383
Hpy188I TCNGA 8 cut(s) 39, 46, 280, 412, 1090, 1350, 1423, 1693
Hpy188III TCNNGA 3 cut(s) 218, 1318, 1742
Hpy8I GTNNAC 7 cut(s) 354, 421, 629, 740, 1030, 1221, 1383
HpyAV CCTTC 7 cut(s) 17, 76, 143, 236, 409, 1002, 1330
HpyCH4III ACNGT 5 cut(s) 326, 368, 769, 1225, 1300
HpyCH4IV ACGT 1 cut(s) 1560
HpyCH4V TGCA 4 cut(s) 1231, 1418, 1504, 1619
HpyF10VI GCNNNNNNNGC 5 cut(s) 290, 390, 1013, 1364, 1485
HpyF3I CTNAG 9 cut(s) 21, 189, 409, 595, 884, 1191, 1263, 1641, 1683
HpySE526I ACGT 1 cut(s) 1560
Hsp92I GRCGYC 1 cut(s) 110
Hsp92II CATG 8 cut(s) 235, 472, 508, 617, 1054, 1085, 1100, 1745
HspAI GCGC 1 cut(s) 4
KflI GGGWCCC 1 cut(s) 1133
KroI GCCGGC 1 cut(s) 112
KroNI GCCGGC 1 cut(s) 114
Ksp22I TGATCA 2 cut(s) 1042, 1102
KspAI GTTAAC 1 cut(s) 1030
Kzo9I GATC 8 cut(s) 214, 316, 559, 811, 868, 1042, 1102, 1738
LmnI GCTCC 4 cut(s) 152, 1021, 1249, 1493
Lsp1109I GCAGC 3 cut(s) 1215, 1228, 1491
LweI GCATC 4 cut(s) 271, 1131, 1243, 1427
MaeI CTAG 5 cut(s) 294, 1011, 1215, 1443, 1662
MaeII ACGT 1 cut(s) 1560
MaeIII GTNAC 6 cut(s) 27, 106, 817, 910, 1396, 1628
MalI GATC 8 cut(s) 216, 318, 561, 813, 870, 1044, 1104, 1740
MboI GATC 8 cut(s) 214, 316, 559, 811, 868, 1042, 1102, 1738
MboII GAAGA 8 cut(s) 534, 568, 614, 1136, 1177, 1354, 1527, 1720
MflI RGATCY 1 cut(s) 214
MhlI GDGCHC 4 cut(s) 89, 992, 1018, 1214
MlsI TGGCCA 1 cut(s) 1095
MluCI AATT 9 cut(s) 551, 555, 657, 702, 842, 864, 1611, 1620, 1729
MluNI TGGCCA 1 cut(s) 1095
MlyI GAGTC 4 cut(s) 861, 1079, 1354, 1455
MmeI TCCRAC 1 cut(s) 1635
Mox20I TGGCCA 1 cut(s) 1095
MroNI GCCGGC 1 cut(s) 112
MroXI GAANNNNTTC 2 cut(s) 225, 752
MscI TGGCCA 1 cut(s) 1095
Msp20I TGGCCA 1 cut(s) 1095
MspCI CTTAAG 1 cut(s) 509
MspI CCGG 4 cut(s) 72, 83, 113, 140
MspR9I CCNGG 4 cut(s) 84, 141, 1138, 1374
MvaI CCWGG 2 cut(s) 1138, 1374
MwoI GCNNNNNNNGC 5 cut(s) 290, 390, 1013, 1364, 1485
NaeI GCCGGC 1 cut(s) 114
NciI CCSGG 2 cut(s) 84, 141
NdeII GATC 8 cut(s) 214, 316, 559, 811, 868, 1042, 1102, 1738
NgoMIV GCCGGC 1 cut(s) 112
NlaIII CATG 8 cut(s) 235, 472, 508, 617, 1054, 1085, 1100, 1745
NlaIV GGNNCC 3 cut(s) 1134, 1135, 1489
NmuCI GTSAC 4 cut(s) 106, 817, 910, 1628
PagI TCATGA 1 cut(s) 1741
PceI AGGCCT 3 cut(s) 676, 889, 1688
PdiI GCCGGC 1 cut(s) 114
PdmI GAANNNNTTC 2 cut(s) 225, 752
PfeI GAWTC 7 cut(s) 161, 245, 729, 905, 936, 1055, 1670
PkrI GCNGC 4 cut(s) 149, 1230, 1243, 1481
Ple19I CGATCG 1 cut(s) 319
PleI GAGTC 4 cut(s) 860, 1079, 1353, 1454
PpsI GAGTC 4 cut(s) 860, 1079, 1353, 1454
PpuMI RGGWCCY 2 cut(s) 238, 1133
PshBI ATTAAT 2 cut(s) 554, 1038
Psp124BI GAGCTC 1 cut(s) 1214
Psp1406I AACGTT 1 cut(s) 1560
Psp5II RGGWCCY 2 cut(s) 238, 1133
Psp6I CCWGG 2 cut(s) 1136, 1372
PspFI CCCAGC 1 cut(s) 644
PspGI CCWGG 2 cut(s) 1136, 1372
PspN4I GGNNCC 3 cut(s) 1134, 1135, 1489
PspPI GGNCC 6 cut(s) 238, 629, 1133, 1187, 1320, 1439
PspPPI RGGWCCY 2 cut(s) 238, 1133
PsuI RGATCY 1 cut(s) 214
PvuI CGATCG 1 cut(s) 319
RsaI GTAC 2 cut(s) 420, 1411
RsaNI GTAC 2 cut(s) 419, 1410
SacI GAGCTC 1 cut(s) 1214
SatI GCNGC 4 cut(s) 148, 1229, 1242, 1480
Sau3AI GATC 8 cut(s) 214, 316, 559, 811, 868, 1042, 1102, 1738
Sau96I GGNCC 6 cut(s) 238, 629, 1133, 1187, 1320, 1439
SchI GAGTC 4 cut(s) 861, 1079, 1354, 1455
ScrFI CCNGG 4 cut(s) 84, 141, 1138, 1374
SduI GDGCHC 4 cut(s) 89, 992, 1018, 1214
SfaNI GCATC 4 cut(s) 271, 1131, 1243, 1427
SfcI CTRYAG 2 cut(s) 322, 822
SinI GGWCC 6 cut(s) 238, 629, 1133, 1187, 1320, 1439
SmlI CTYRAG 1 cut(s) 509
SmoI CTYRAG 1 cut(s) 509
Sse9I AATT 9 cut(s) 551, 555, 657, 702, 842, 864, 1611, 1620, 1729
SseBI AGGCCT 3 cut(s) 676, 889, 1688
SsiI CCGC 4 cut(s) 129, 147, 150, 624
SspMI CTAG 5 cut(s) 294, 1011, 1215, 1443, 1662
SstI GAGCTC 1 cut(s) 1214
StuI AGGCCT 3 cut(s) 676, 889, 1688
StyD4I CCNGG 4 cut(s) 82, 139, 1136, 1372
StyI CCWWGG 3 cut(s) 379, 632, 978
TaaI ACNGT 5 cut(s) 326, 368, 769, 1225, 1300
TaiI ACGT 1 cut(s) 1563
TaqI TCGA 2 cut(s) 315, 348
TaqII GACCGA 1 cut(s) 1751
TasI AATT 9 cut(s) 551, 555, 657, 702, 842, 864, 1611, 1620, 1729
TauI GCSGC 1 cut(s) 150
TfiI GAWTC 7 cut(s) 161, 245, 729, 905, 936, 1055, 1670
TscAI CASTG 3 cut(s) 772, 1230, 1489
TseFI GTSAC 4 cut(s) 106, 817, 910, 1628
TseI GCWGC 3 cut(s) 1228, 1241, 1479
Tsp45I GTSAC 4 cut(s) 106, 817, 910, 1628
TspDTI ATGAA 5 cut(s) 493, 568, 623, 1163, 1469
TspGWI ACGGA 1 cut(s) 227
TspRI CASTG 3 cut(s) 772, 1230, 1489
Vha464I CTTAAG 1 cut(s) 509
VpaK11BI GGWCC 6 cut(s) 238, 629, 1133, 1187, 1320, 1439
VspI ATTAAT 2 cut(s) 554, 1038
XapI RAATTY 2 cut(s) 842, 1611
XmiI GTMKAC 2 cut(s) 739, 1382
XmnI GAANNNNTTC 2 cut(s) 225, 752
XspI CTAG 5 cut(s) 294, 1011, 1215, 1443, 1662
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.