Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 3 cut(s) | 176, 427, 512 |
| AfaI | GTAC | 2 cut(s) | 118, 650 |
| AflII | CTTAAG | 1 cut(s) | 602 |
| AgsI | TTSAA | 5 cut(s) | 187, 212, 454, 517, 559 |
| AluBI | AGCT | 2 cut(s) | 292, 344 |
| AluI | AGCT | 2 cut(s) | 292, 344 |
| Alw21I | GWGCWC | 2 cut(s) | 258, 381 |
| Alw26I | GTCTC | 2 cut(s) | 53, 344 |
| ApeKI | GCWGC | 1 cut(s) | 341 |
| ApoI | RAATTY | 3 cut(s) | 176, 427, 512 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 90, 431 |
| BaeGI | GKGCMC | 2 cut(s) | 524, 596 |
| BanII | GRGCYC | 1 cut(s) | 501 |
| BbsI | GAAGAC | 1 cut(s) | 486 |
| Bbv12I | GWGCWC | 2 cut(s) | 258, 381 |
| BbvI | GCAGC | 1 cut(s) | 353 |
| BceAI | ACGGC | 1 cut(s) | 354 |
| BciVI | GTATCC | 2 cut(s) | 41, 65 |
| BcoDI | GTCTC | 2 cut(s) | 53, 344 |
| BfaI | CTAG | 3 cut(s) | 95, 263, 374 |
| BfmI | CTRYAG | 1 cut(s) | 75 |
| BfrI | CTTAAG | 1 cut(s) | 602 |
| BfuI | GTATCC | 2 cut(s) | 41, 65 |
| BglII | AGATCT | 1 cut(s) | 10 |
| BisI | GCNGC | 1 cut(s) | 342 |
| BlsI | GCNGC | 1 cut(s) | 343 |
| BmsI | GCATC | 2 cut(s) | 190, 560 |
| BpiI | GAAGAC | 1 cut(s) | 486 |
| BpuEI | CTTGAG | 2 cut(s) | 27, 637 |
| BsaI | GGTCTC | 1 cut(s) | 53 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 604, 634 |
| BseGI | GGATG | 3 cut(s) | 481, 499, 591 |
| BseRI | GAGGAG | 2 cut(s) | 338, 422 |
| BseSI | GKGCMC | 2 cut(s) | 524, 596 |
| BseXI | GCAGC | 1 cut(s) | 353 |
| BsiHKAI | GWGCWC | 2 cut(s) | 258, 381 |
| BslFI | GGGAC | 1 cut(s) | 397 |
| BsmAI | GTCTC | 2 cut(s) | 53, 344 |
| BsmFI | GGGAC | 1 cut(s) | 397 |
| BsmI | GAATGC | 1 cut(s) | 334 |
| Bso31I | GGTCTC | 1 cut(s) | 53 |
| Bsp1286I | GDGCHC | 5 cut(s) | 258, 381, 501, 524, 596 |
| Bsp143I | GATC | 2 cut(s) | 10, 437 |
| BspTI | CTTAAG | 1 cut(s) | 602 |
| BspTNI | GGTCTC | 1 cut(s) | 53 |
| BssMI | GATC | 2 cut(s) | 10, 437 |
| Bst4CI | ACNGT | 1 cut(s) | 29 |
| BstAFI | CTTAAG | 1 cut(s) | 602 |
| BstDEI | CTNAG | 2 cut(s) | 123, 617 |
| BstF5I | GGATG | 3 cut(s) | 481, 499, 591 |
| BstKTI | GATC | 2 cut(s) | 13, 440 |
| BstMAI | GTCTC | 2 cut(s) | 53, 344 |
| BstMBI | GATC | 2 cut(s) | 10, 437 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 338 |
| BstNSI | RCATGY | 1 cut(s) | 544 |
| BstSFI | CTRYAG | 1 cut(s) | 75 |
| BstSLI | GKGCMC | 2 cut(s) | 524, 596 |
| BstV1I | GCAGC | 1 cut(s) | 353 |
| BstV2I | GAAGAC | 1 cut(s) | 486 |
| BstX2I | RGATCY | 1 cut(s) | 10 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 180 |
| BstYI | RGATCY | 1 cut(s) | 10 |
| BsuI | GTATCC | 2 cut(s) | 41, 65 |
| BtsCI | GGATG | 3 cut(s) | 481, 499, 591 |
| Csp6I | GTAC | 2 cut(s) | 117, 649 |
| CviAII | CATG | 4 cut(s) | 206, 420, 462, 541 |
| CviJI | RGCY | 6 cut(s) | 89, 172, 292, 344, 499, 616 |
| CviKI_1 | RGCY | 6 cut(s) | 89, 172, 292, 344, 499, 616 |
| CviQI | GTAC | 2 cut(s) | 117, 649 |
| DdeI | CTNAG | 2 cut(s) | 123, 617 |
| DpnI | GATC | 2 cut(s) | 12, 439 |
| DpnII | GATC | 2 cut(s) | 10, 437 |
| DraI | TTTAAA | 1 cut(s) | 273 |
| Eco24I | GRGCYC | 1 cut(s) | 501 |
| Eco31I | GGTCTC | 1 cut(s) | 53 |
| EcoT38I | GRGCYC | 1 cut(s) | 501 |
| FaeI | CATG | 4 cut(s) | 209, 423, 465, 544 |
| FaqI | GGGAC | 1 cut(s) | 397 |
| FatI | CATG | 4 cut(s) | 205, 419, 461, 540 |
| FauNDI | CATATG | 1 cut(s) | 249 |
| Fnu4HI | GCNGC | 1 cut(s) | 342 |
| FokI | GGATG | 3 cut(s) | 488, 506, 598 |
| FriOI | GRGCYC | 1 cut(s) | 501 |
| Fsp4HI | GCNGC | 1 cut(s) | 342 |
| FspBI | CTAG | 3 cut(s) | 95, 263, 374 |
| GluI | GCNGC | 1 cut(s) | 342 |
| Hin1II | CATG | 4 cut(s) | 209, 423, 465, 544 |
| HinfI | GANTC | 3 cut(s) | 112, 410, 482 |
| Hpy166II | GTNNAC | 1 cut(s) | 119 |
| Hpy188I | TCNGA | 1 cut(s) | 437 |
| Hpy188III | TCNNGA | 5 cut(s) | 58, 95, 305, 374, 654 |
| Hpy8I | GTNNAC | 1 cut(s) | 119 |
| HpyCH4III | ACNGT | 1 cut(s) | 29 |
| HpyCH4V | TGCA | 3 cut(s) | 540, 551, 575 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 338 |
| HpyF3I | CTNAG | 2 cut(s) | 123, 617 |
| Hsp92II | CATG | 4 cut(s) | 209, 423, 465, 544 |
| Kzo9I | GATC | 2 cut(s) | 10, 437 |
| LmnI | GCTCC | 1 cut(s) | 253 |
| LpnPI | CCDG | 3 cut(s) | 71, 84, 609 |
| Lsp1109I | GCAGC | 1 cut(s) | 353 |
| LweI | GCATC | 2 cut(s) | 190, 560 |
| MaeI | CTAG | 3 cut(s) | 95, 263, 374 |
| MaeIII | GTNAC | 2 cut(s) | 79, 243 |
| MalI | GATC | 2 cut(s) | 12, 439 |
| MboI | GATC | 2 cut(s) | 10, 437 |
| MboII | GAAGA | 2 cut(s) | 203, 491 |
| MflI | RGATCY | 1 cut(s) | 10 |
| MhlI | GDGCHC | 5 cut(s) | 258, 381, 501, 524, 596 |
| MluCI | AATT | 3 cut(s) | 176, 427, 512 |
| MlyI | GAGTC | 2 cut(s) | 419, 476 |
| MmeI | TCCRAC | 1 cut(s) | 58 |
| MnlI | CCTC | 9 cut(s) | 78, 126, 301, 316, 381, 393, 400, 526, 606 |
| MroXI | GAANNNNTTC | 2 cut(s) | 90, 431 |
| MseI | TTAA | 3 cut(s) | 272, 356, 603 |
| MspCI | CTTAAG | 1 cut(s) | 602 |
| Mva1269I | GAATGC | 1 cut(s) | 334 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 338 |
| NdeI | CATATG | 1 cut(s) | 249 |
| NdeII | GATC | 2 cut(s) | 10, 437 |
| NlaIII | CATG | 4 cut(s) | 209, 423, 465, 544 |
| NmuCI | GTSAC | 1 cut(s) | 79 |
| NspI | RCATGY | 1 cut(s) | 544 |
| PctI | GAATGC | 1 cut(s) | 334 |
| PdmI | GAANNNNTTC | 2 cut(s) | 90, 431 |
| PfeI | GAWTC | 1 cut(s) | 112 |
| PkrI | GCNGC | 1 cut(s) | 343 |
| PleI | GAGTC | 2 cut(s) | 418, 476 |
| PpsI | GAGTC | 2 cut(s) | 418, 476 |
| PsuI | RGATCY | 1 cut(s) | 10 |
| RsaI | GTAC | 2 cut(s) | 118, 650 |
| RsaNI | GTAC | 2 cut(s) | 117, 649 |
| SaqAI | TTAA | 3 cut(s) | 272, 356, 603 |
| SatI | GCNGC | 1 cut(s) | 342 |
| Sau3AI | GATC | 2 cut(s) | 10, 437 |
| SchI | GAGTC | 2 cut(s) | 419, 476 |
| SduI | GDGCHC | 5 cut(s) | 258, 381, 501, 524, 596 |
| SetI | ASST | 9 cut(s) | 49, 124, 137, 158, 294, 312, 346, 373, 394 |
| SfaNI | GCATC | 2 cut(s) | 190, 560 |
| SfcI | CTRYAG | 1 cut(s) | 75 |
| SmlI | CTYRAG | 3 cut(s) | 42, 602, 652 |
| SmoI | CTYRAG | 3 cut(s) | 42, 602, 652 |
| Sse9I | AATT | 3 cut(s) | 176, 427, 512 |
| SspMI | CTAG | 3 cut(s) | 95, 263, 374 |
| TaaI | ACNGT | 1 cut(s) | 29 |
| TaqI | TCGA | 1 cut(s) | 294 |
| TaqII | GACCGA | 1 cut(s) | 98 |
| TasI | AATT | 3 cut(s) | 176, 427, 512 |
| TfiI | GAWTC | 1 cut(s) | 112 |
| Tru1I | TTAA | 3 cut(s) | 272, 356, 603 |
| Tru9I | TTAA | 3 cut(s) | 272, 356, 603 |
| TseFI | GTSAC | 1 cut(s) | 79 |
| TseI | GCWGC | 1 cut(s) | 341 |
| Tsp45I | GTSAC | 1 cut(s) | 79 |
| TspDTI | ATGAA | 3 cut(s) | 408, 492, 578 |
| TspGWI | ACGGA | 1 cut(s) | 598 |
| Vha464I | CTTAAG | 1 cut(s) | 602 |
| XapI | RAATTY | 3 cut(s) | 176, 427, 512 |
| XbaI | TCTAGA | 2 cut(s) | 94, 373 |
| XceI | RCATGY | 1 cut(s) | 544 |
| XmnI | GAANNNNTTC | 2 cut(s) | 90, 431 |
| XspI | CTAG | 3 cut(s) | 95, 263, 374 |