Rorug02G0257400

Haloacid dehalogenase-like hydrolase domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
27000896 .. 27029409
28514 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0257400.1

Sequence Viewer

Length: 2154 bp
ATGGATTTAGCCTCCAAGCTCCACCGCCTCGACCTCCGCTCCTCCTTCCTCGCCGGCTCCGCCCCCTTCGACGCCCGCACCACCTCTCTCCCTTCTCGCCTCCGCTCCCTTTCGCAACGAATCTCCGCCCAATCCACTAAAGCTAACTCCAACTCCATCAAAACCACTACTTTATTCAAACCCAGAACACCCAGTTCCCAGATACGAACTGGGTTGCCGGCCTTGGCCGTCGAAACTCCGGTGGCCACGGCGGAGGAGAACGACATTGAGTCTTTGTTCTCGGACGATTCCGGGACTGGGAGTAATGAACGTAAACGTGGCAAGAAGAACTCGAATTCTGGGGCTTCCGGGATTTCTTCTGGTGTTAAGCTTGAAAATGTGAGGAAAAGCTATAAGGGTGTGACTGTGTTGAAGGATGTGACGTGGGAAGTGAAGAAGGGGGAGAAGGTTGGATTGGTGGGGGTGAATGGGGCAGGGAAGACAACCCAGATGAGGATTATTGCTGGTTTGGAAGAACCGGATTCGGGGAATGTGATAAAGGCGAAATCGAATATGAAGATTGCGTTTTTGAGTCAAGAATTCGAGGTTTCGATGAGTAAAACAGTGAGGGAGGAGTTTATGACTGCTTTTAAGGAGGAGATGGAGGTGTCAGAGAGGCTGGAGAAGGTGCAGAAGGCGTTGGAGAGTGCTGTGGAGGATATGGACTTGATGGGAAGGCTTTTGGATGAGCTTGATAAGCTTCAGAATCGGGCGCAGGAGTGTGACTTGAGTATGGTGGATGCGAAGATTAGTAAGTTGATGCCGGAACTTGGGTTTGCGCCGGAGGATGGAGATAGGTTGGTGGCTTCGTTTAGTAGTGGTTGGCAGATGAGGATGTCACTTGGGAAGATTTTGCTTCAGGACCCTGATTTACTACTGCTGGATGAGCCTACAAATCACCTTGACCTTGACACCATTGAGTGGCTTGAAGATTATCTCAATCAGCAAGATGTGCCAATGGTTATCATATCTCATGACCGAGCTTTTCTCGATCAATTGTGTACAAAAATAGTGGAAACTGATATGGGTGTCTCCAGAACGTATGAGGGAAATTATTCTGAGTATTATATTGCAAAAGCAGCATGGATCGAAAGTCAAAATGCTGCTTGGGAGAAGCAGCAGAAGGAAATTGAGCACACAAAAGATTTGATACATAGGTTGGGCGCTGGAGCAAATTCTGGCCGTGCGTCTTCTGCTGGAAAGAAGCTGGAGAAACTTCAGGAAGAGGATCTTGTTGAAAGGCCATTTCAGAGGAAACAGATGAAGATCAGGTTTCCTGAACGGGGAAGAAGTGGAAGATTTGTTGCAACACTTAAGAATCTGGAAGCTGGCTTTGGAGATAAGGTTCTGTTTAGCAGAGCAAATCTCACAATTGAAAGAGGAGAGAAACTGGCCATTATCGGCCCAAATGGATGTGGCAAGAGTACTTTGCTGAAACTAATGCTGGGTTTACAGAAGCCAATTGCAGGTGAAGTTCTGCTTGGGGAGCATAATGTCCTACCAAACTATTTTGAGCAAAATCAGGCTGAGGCACTTGATTTAAATAAAACAGTGCTTGAGACAGTAGAAGAAGCAGCAGAGGATTGGAGACTTGATGATATAAAGGGTCTCCTTGGTCGTTGTAATTTCAAAGCAGATATGCTTGATAGAAAGGTTTCCCTCTTAAGTGGTGGTGAGAAGGCACGCCTTGCCTTCTGCAAGTTCATGGTAAAGCCATCTACTCTGCTAGTTCTGGATGAACCCACAAATCACTTGGACATTCCTTCAAAAGAGATGCTTGAGGAGGCAATAAATGAGTACAAAGGCACTGTTATCACAGTTTCTCATGACCGATACTTTATAAAGCAAATAGTTAATAGAGTAGTGGAGGTTAAAGACAGAAGACTGCAAGATTATGCAGGCAATTACAATTACTATCTAGAGAAGAATCTAGATGCTAGGGAAAGAGAGCTCGAGCGTGAGGCAGAGATTGAGGAGAAGGCTCCTAAAGTCAAAGCCAAATCAAAGATGTCTAAGGCTGAAAAGGAAGCTCGGAAGAAGCAAAAGATGCAGGCAATCCAGCAAGCAAAGGCAAAATCGAAAGGAATTACAAAGAACGCTAAGAGATGGAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

717

Amino Acids

80.44

Weight (kDa)

8.23

Isoelectric Point (pI)

36.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 137 - 312 2.1e-24 ABC transporter
ABC_tran_Xtn PF12848 351 - 438 3.8e-19 ABC transporter
ABC_tran PF00005 466 - 596 2.1e-26 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01050
fragaria_vesca FvH4_1g24181 FvH4_1g28741 FvH4_1g29781 FvH4_2g00621 FvH4_2g04885 FvH4_2g11953 FvH4_2g11954 FvH4_2g12001 FvH4_2g12002 FvH4_2g12222 FvH4_2g12223 FvH4_2g38351 FvH4_3g04401 FvH4_3g31330 FvH4_3g33091 FvH4_4g11461 FvH4_5g27993 FvH4_5g27994 FvH4_5g28072 FvH4_5g28231 FvH4_5g28591 FvH4_5g34261 FvH4_6g18162 FvH4_6g25500 FvH4_6g25561 FvH4_6g25792 FvH4_6g27602 FvH4_6g46881
malus_domestica MD03G1019700.v1.1
prunus_persica Prupe.1G055400_v2.0.a1 Prupe.1G179200_v2.0.a1 Prupe.1G208200_v2.0.a1 Prupe.1G231200_v2.0.a1 Prupe.2G044900_v2.0.a1 Prupe.2G055100_v2.0.a1 Prupe.2G097600_v2.0.a1 Prupe.2G114200_v2.0.a1 Prupe.3G109000_v2.0.a1 Prupe.3G109300_v2.0.a1 Prupe.3G109600_v2.0.a1 Prupe.4G246900_v2.0.a1 Prupe.5G026400_v2.0.a1
pyrus_communis pycom05g17130 pycom07g06820 pycom07g18590 pycom07g22730 pycom12401g00120 pycom12401g00180 pycom420g00470
rosa_chinensis RchiOBHm_Chr1g0342591 RchiOBHm_Chr1g0342601 RchiOBHm_Chr1g0342611 RchiOBHm_Chr1g0351011 RchiOBHm_Chr2g0146151 RchiOBHm_Chr2g0171821 RchiOBHm_Chr3g0492921 RchiOBHm_Chr3g0492931 RchiOBHm_Chr4g0406871 RchiOBHm_Chr4g0426311 RchiOBHm_Chr5g0020721 RchiOBHm_Chr5g0050111 RchiOBHm_Chr5g0051681 RchiOBHm_Chr5g0053531 RchiOBHm_Chr5g0054841 RchiOBHm_Chr5g0055061 RchiOBHm_Chr5g0055071 RchiOBHm_Chr6g0248911 RchiOBHm_Chr6g0291741 RchiOBHm_Chr7g0187781 RchiOBHm_Chr7g0220081 RchiOBHm_Chr7g0224391 RchiOBHm_Chr7g0235221
rosa_laevigata RLG00000002133 RLG00000002402 RLG00000002736 RLG00000011046 RLG00000013214 RLG00000016550 RLG00000021669 RLG00000022948 RLG00000023691 RLG00000024682 RLG00000027826 RLG00000029734 RLG00000029831 RLG00000030305 RLG00000037042
rosa_multiflora Rmu_co7992532.1_g000001 Rmu_co8021462.1_g000001 Rmu_co8229237.1_g000001 Rmu_co8281571.1_g000001 Rmu_co8326451.1_g000001 Rmu_co8359553.1_g000001 Rmu_co8372117.1_g000001 Rmu_co8427177.1_g000001 Rmu_co8474063.1_g000002 Rmu_sc0000007.1_g000020 Rmu_sc0000173.1_g000002 Rmu_sc0000367.1_g000086 Rmu_sc0000367.1_g000088 Rmu_sc0000559.1_g000002 Rmu_sc0000733.1_g000014 Rmu_sc0000745.1_g000006 Rmu_sc0000791.1_g000046 Rmu_sc0000791.1_g000049 Rmu_sc0000824.1_g000010 Rmu_sc0000824.1_g000011 Rmu_sc0000834.1_g000009 Rmu_sc0000834.1_g000011 Rmu_sc0000911.1_g000020 Rmu_sc0000935.1_g000034 Rmu_sc0000935.1_g000051 Rmu_sc0000935.1_g000053 Rmu_sc0001000.1_g000005 Rmu_sc0001000.1_g000006 Rmu_sc0001150.1_g000004 Rmu_sc0001227.1_g000002 Rmu_sc0001322.1_g000018 Rmu_sc0001343.1_g000001 Rmu_sc0001356.1_g000004 Rmu_sc0001356.1_g000005 Rmu_sc0001363.1_g000007 Rmu_sc0001463.1_g000012 Rmu_sc0001484.1_g000023 Rmu_sc0001516.1_g000003 Rmu_sc0001516.1_g000005 Rmu_sc0001619.1_g000005 Rmu_sc0001648.1_g000032 Rmu_sc0001648.1_g000035 Rmu_sc0001694.1_g000008 Rmu_sc0001809.1_g000023 Rmu_sc0002093.1_g000027 Rmu_sc0002231.1_g000004 Rmu_sc0002245.1_g000001 Rmu_sc0002245.1_g000003 Rmu_sc0002354.1_g000045 Rmu_sc0002354.1_g000048 Rmu_sc0002368.1_g000014 Rmu_sc0002368.1_g000016 Rmu_sc0002368.1_g000017 Rmu_sc0002401.1_g000030 Rmu_sc0002487.1_g000012 Rmu_sc0002798.1_g000028 Rmu_sc0002923.1_g000012 Rmu_sc0002960.1_g000002 Rmu_sc0003033.1_g000072 Rmu_sc0003133.1_g000015 Rmu_sc0003168.1_g000007 Rmu_sc0003945.1_g000002 Rmu_sc0003945.1_g000004 Rmu_sc0003945.1_g000005 Rmu_sc0003979.1_g000004 Rmu_sc0004005.1_g000007 Rmu_sc0004059.1_g000018 Rmu_sc0004064.1_g000001 Rmu_sc0004083.1_g000007 Rmu_sc0004083.1_g000008 Rmu_sc0004354.1_g000033 Rmu_sc0004368.1_g000035 Rmu_sc0004483.1_g000032 Rmu_sc0004646.1_g000012 Rmu_sc0005014.1_g000006 Rmu_sc0005016.1_g000046 Rmu_sc0005016.1_g000051 Rmu_sc0005033.1_g000005 Rmu_sc0005033.1_g000007 Rmu_sc0005065.1_g000002 Rmu_sc0005065.1_g000004 Rmu_sc0005168.1_g000012 Rmu_sc0005238.1_g000001 Rmu_sc0005365.1_g000012 Rmu_sc0005631.1_g000005 Rmu_sc0005704.1_g000013 Rmu_sc0005704.1_g000014 Rmu_sc0005781.1_g000030 Rmu_sc0005789.1_g000016 Rmu_sc0006185.1_g000001 Rmu_sc0006185.1_g000002 Rmu_sc0006266.1_g000044 Rmu_sc0006561.1_g000018 Rmu_sc0006695.1_g000016 Rmu_sc0007739.1_g000022 Rmu_sc0008050.1_g000013 Rmu_sc0008169.1_g000006 Rmu_sc0008855.1_g000006 Rmu_sc0009298.1_g000002 Rmu_sc0009495.1_g000005 Rmu_sc0010608.1_g000003 Rmu_sc0010958.1_g000005 Rmu_sc0011506.1_g000001 Rmu_sc0011790.1_g000002 Rmu_sc0011790.1_g000003 Rmu_sc0012042.1_g000004 Rmu_sc0012042.1_g000005 Rmu_sc0012140.1_g000020 Rmu_sc0012726.1_g000005 Rmu_sc0012746.1_g000023 Rmu_sc0013193.1_g000002 Rmu_sc0013193.1_g000003 Rmu_sc0017997.1_g000001 Rmu_sc0021401.1_g000001 Rmu_sc0025959.1_g000001 Rmu_sc0026403.1_g000003 Rmu_sc0028616.1_g000002 Rmu_sc0029801.1_g000002 Rmu_sc0032453.1_g000001 Rmu_sc0033672.1_g000002 Rmu_sc0034553.1_g000001 Rmu_sc0036883.1_g000001 Rmu_ssc0000096.1_g000001 Rmu_ssc0000158.1_g000031 Rmu_ssc0000291.1_g000034 Rmu_ssc0000381.1_g000026 Rmu_ssc0000387.1_g000010 Rmu_ssc0000474.1_g000002 Rmu_ssc0000474.1_g000004
rosa_roxburghii Rroxscaffold_1G00020090 Rroxscaffold_1G00020100 Rroxscaffold_1G00022940 Rroxscaffold_1G00044600 Rroxscaffold_1G00054420 Rroxscaffold_1G00054430 Rroxscaffold_1G00056440 Rroxscaffold_2G00090180 Rroxscaffold_2G00101250 Rroxscaffold_2G00110600 Rroxscaffold_2G00152800 Rroxscaffold_4G00320370 Rroxscaffold_4G00320640 Rroxscaffold_4G00322420 Rroxscaffold_4G00324670 Rroxscaffold_5G00332760 Rroxscaffold_5G00345010 Rroxscaffold_5G00345020 Rroxscaffold_5G00355470 Rroxscaffold_5G00385520 Rroxscaffold_6G00394610 Rroxscaffold_6G00394700 Rroxscaffold_7G00164190 Rroxscaffold_7G00182750 Rroxscaffold_7G00183540 Rroxscaffold_7G00203520 Rroxscaffold_7G00211630
rosa_rugosa Rorug01G0041400 Rorug01G0041500 Rorug01G0065300 Rorug01G0065300 Rorug01G0069700 Rorug01G0069800 Rorug01G0070300 Rorug01G0072300 Rorug01G0072900 Rorug01G0093100 Rorug01G0147100.1 Rorug01G0196900 Rorug01G0259700 Rorug02G0162000 Rorug02G0182700 Rorug02G0212300 Rorug02G0214700 Rorug02G0229900 Rorug02G0246100 Rorug02G0257400 Rorug02G0259100 Rorug02G0341400 Rorug02G0341500 Rorug02G0341700 Rorug02G0341800 Rorug02G0355600 Rorug02G0386100 Rorug02G0386100 Rorug02G0387000 Rorug02G0387100 Rorug02G0388400 Rorug02G0388500 Rorug02G0429100 Rorug02G0429100 Rorug02G0455300 Rorug02G0634400 Rorug03G0163200 Rorug03G0198500 Rorug03G0199600 Rorug03G0204000 Rorug03G0265600 Rorug03G0266100 Rorug03G0266200 Rorug03G0280600 Rorug03G0348200 Rorug03G0349700 Rorug03G0349800 Rorug04G0020200 Rorug04G0073700 Rorug04G0215000 Rorug04G0426100 Rorug05G0064200 Rorug05G0064300 Rorug05G0265700 Rorug05G0287400 Rorug05G0287500 Rorug05G0287500 Rorug05G0405000 Rorug05G0525700 Rorug05G0525800 Rorug05G0588200 Rorug06G0038200 Rorug06G0057900 Rorug06G0058000 Rorug06G0058500 Rorug06G0058600 Rorug06G0116700 Rorug06G0159300.1 Rorug06G0159400 Rorug06G0174700 Rorug06G0375500 Rorug07G0091400 Rorug07G0094900 Rorug07G0108100 Rorug07G0140700 Rorug07G0140700 Rorug07G0207100 Rorug07G0207100 Rorug07G0207200 Rorug07G0287300
rosa_samantha Rh1AG100100 Rh1AG104500 Rh1BG150700 Rh1BG237700 Rh1BG334000 Rh1CG090000 Rh1CG100100 Rh1CG347300 Rh1DG090500 Rh1DG096100 Rh1DG107400 Rh1DG182500 Rh1DG265700 Rh1DG365200 Rh2BG256800 Rh2BG361300 Rh2BG468600 Rh2BG549800 Rh2CG270900 Rh2DG276700 Rh2DG276800 Rh2DG377700 Rh2DG477900 Rh3AG161200 Rh3BG138800 Rh3BG185700 Rh3BG269600 Rh3CG176000 Rh4AG006100 Rh4AG216700 Rh4AG355800 Rh4CG108600 Rh5AG141700 Rh5AG480000 Rh5BG014500 Rh5BG134600 Rh5BG295400 Rh5BG552900 Rh5CG058600 Rh5CG286400 Rh5CG350900 Rh5CG575800 Rh5DG004300 Rh5DG254600 Rh5DG356500 Rh6AG106500 Rh6AG191100 Rh6AG224700 Rh6BG074700 Rh6BG181400 Rh6BG352200 Rh6BG408400 Rh6BG453600 Rh6CG047400 Rh6CG172200 Rh6CG189400 Rh6CG515800 Rh6DG042900 Rh6DG163400 Rh7AG089300 Rh7AG227400 Rh7AG275600 Rh7AG375100 Rh7AG460900 Rh7AG485200 Rh7BG146100 Rh7BG354300 Rh7CG077100 Rh7CG294500 Rh7CG393800 Rh7DG041700 Rh7DG062700 Rh7DG091700 Rh7DG178900 Rh7DG192300 Rh7DG297000 Rh7DG403600 Rh7DG411800
rosa_wichuraiana Rw0G007100 Rw0G011430 Rw1G003580 Rw1G004040 Rw1G005880 Rw1G009860 Rw1G009990 Rw1G012190 Rw1G012200 Rw1G013740 Rw1G013750 Rw1G016710 Rw1G021050 Rw2G023790 Rw2G028810 Rw2G035890 Rw2G036250 Rw4G008880 Rw4G014380 Rw4G014390 Rw4G016020 Rw4G037160 Rw5G010060 Rw5G030620 Rw5G033840 Rw5G049840 Rw5G049850 Rw6G003450 Rw6G015080 Rw7G019640 Rw7G024060 Rw7G024070 Rw7G029090 Rw7G037010 Rw7G039170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1880
AarI CACCTGC 1 cut(s) 1496
Acc36I ACCTGC 1 cut(s) 1496
AccB7I CCANNNNNTGG 1 cut(s) 960
AccBSI CCGCTC 2 cut(s) 39, 105
AciI CCGC 7 cut(s) 25, 37, 60, 76, 103, 126, 251
AclWI GGATC 2 cut(s) 1133, 1275
AcoI YGGCCR 4 cut(s) 225, 243, 1219, 1431
AcsI RAATTY 3 cut(s) 334, 578, 1213
AcuI CTGAAG 3 cut(s) 725, 881, 1241
AcyI GRCGYC 1 cut(s) 72
AfaI GTAC 3 cut(s) 1042, 1465, 1838
AfiI CCNNNNNNNGG 8 cut(s) 297, 492, 524, 809, 827, 960, 1322, 1505
AflII CTTAAG 2 cut(s) 1352, 1702
AgsI TTSAA 8 cut(s) 178, 374, 412, 968, 1277, 1415, 1669, 1806
AhdI GACNNNNNGTC 1 cut(s) 268
AjiI CACGTC 1 cut(s) 423
AjuI GAANNNNNNNTTGG 6 cut(s) 437, 469, 1356, 1388, 1503, 1535
AloI GAACNNNNNNTCC 2 cut(s) 1368, 1400
Alw21I GWGCWC 2 cut(s) 1176, 1992
Alw26I GTCTC 4 cut(s) 1075, 1592, 1621, 1652
AlwI GGATC 2 cut(s) 1133, 1275
Ama87I CYCGRG 1 cut(s) 1991
AoxI GGCC 7 cut(s) 219, 225, 243, 1219, 1280, 1431, 1441
ApeKI GCWGC 4 cut(s) 1118, 1142, 1156, 1613
ApoI RAATTY 3 cut(s) 334, 578, 1213
Asp700I GAANNNNTTC 2 cut(s) 1093, 1693
AspLEI GCGC 3 cut(s) 754, 820, 1205
AspS9I GGNCC 2 cut(s) 901, 1442
AsuC2I CCSGG 2 cut(s) 292, 349
AsuHPI GGTGA 4 cut(s) 475, 929, 1520, 1724
AvaI CYCGRG 1 cut(s) 1991
AvaII GGWCC 1 cut(s) 901
BaeI ACNNNNGTAYC 2 cut(s) 1181, 1214
BalI TGGCCA 2 cut(s) 245, 1433
BanII GRGCYC 1 cut(s) 1992
BbsI GAAGAC 3 cut(s) 485, 1221, 1927
Bbv12I GWGCWC 2 cut(s) 1176, 1992
BbvCI CCTCAGC 1 cut(s) 1566
BbvI GCAGC 4 cut(s) 1129, 1130, 1168, 1625
BccI CCATC 6 cut(s) 164, 634, 703, 821, 1762, 2139
BceAI ACGGC 3 cut(s) 212, 264, 1206
BcnI CCSGG 2 cut(s) 292, 349
BcoDI GTCTC 4 cut(s) 1075, 1592, 1621, 1652
BfaI CTAG 4 cut(s) 1766, 1958, 1970, 1977
BfoI RGCGCY 1 cut(s) 1206
BfrI CTTAAG 2 cut(s) 1352, 1702
BfuAI ACCTGC 1 cut(s) 1496
BisI GCNGC 4 cut(s) 1119, 1143, 1157, 1614
BlsI GCNGC 4 cut(s) 1120, 1144, 1158, 1615
BmcAI AGTACT 1 cut(s) 1465
Bme1390I CCNGG 2 cut(s) 292, 349
Bme18I GGWCC 1 cut(s) 901
BmeRI GACNNNNNGTC 1 cut(s) 268
BmeT110I CYCGRG 1 cut(s) 1991
BmgBI CACGTC 1 cut(s) 423
BmgT120I GGNCC 2 cut(s) 901, 1442
BmiI GGNNCC 3 cut(s) 58, 903, 2022
BmrFI CCNGG 2 cut(s) 292, 349
BmrI ACTGGG 3 cut(s) 186, 219, 306
BmsI GCATC 5 cut(s) 769, 789, 1803, 1963, 2076
BmuI ACTGGG 3 cut(s) 186, 219, 306
BpiI GAAGAC 3 cut(s) 485, 1221, 1927
BplI GAGNNNNNCTC 4 cut(s) 1011, 1043, 1389, 1421
BpmI CTGGAG 4 cut(s) 680, 1057, 1227, 1268
Bpu10I CCTNAGC 1 cut(s) 1566
BpuEI CTTGAG 3 cut(s) 787, 1616, 1838
BpuMI CCSGG 2 cut(s) 292, 349
BsaBI GATNNNNATC 1 cut(s) 1304
BsaHI GRCGYC 1 cut(s) 72
BsaI GGTCTC 1 cut(s) 1652
BsaJI CCNNGG 3 cut(s) 222, 246, 1651
BsaWI WCCGGW 2 cut(s) 238, 517
BsaXI ACNNNNNCTCC 6 cut(s) 23, 53, 137, 167, 1368, 1398
Bsc4I CCNNNNNNNGG 8 cut(s) 297, 492, 524, 809, 827, 960, 1322, 1505
Bse118I RCCGGY 2 cut(s) 53, 217
Bse1I ACTGG 4 cut(s) 192, 214, 301, 1434
Bse8I GATNNNNATC 1 cut(s) 1304
BseDI CCNNGG 3 cut(s) 222, 246, 1651
BseGI GGATG 8 cut(s) 421, 730, 784, 832, 879, 928, 1457, 1780
BseJI GATNNNNATC 1 cut(s) 1304
BseLI CCNNNNNNNGG 8 cut(s) 297, 492, 524, 809, 827, 960, 1322, 1505
BseMII CTCAG 2 cut(s) 1089, 1557
BseNI ACTGG 4 cut(s) 192, 214, 301, 1434
BseRI GAGGAG 7 cut(s) 31, 269, 626, 650, 1434, 1835, 2027
BseXI GCAGC 4 cut(s) 1129, 1130, 1168, 1625
BseYI CCCAGC 1 cut(s) 1483
BsgI GTGCAG 1 cut(s) 689
BshFI GGCC 7 cut(s) 221, 227, 245, 1221, 1282, 1433, 1443
BsiHKAI GWGCWC 2 cut(s) 1176, 1992
BsiHKCI CYCGRG 1 cut(s) 1991
BsiSI CCGG 8 cut(s) 54, 218, 239, 291, 348, 518, 803, 821
BslFI GGGAC 1 cut(s) 307
BslI CCNNNNNNNGG 8 cut(s) 297, 492, 524, 809, 827, 960, 1322, 1505
BsmAI GTCTC 4 cut(s) 1075, 1592, 1621, 1652
BsmFI GGGAC 1 cut(s) 307
BsnI GGCC 7 cut(s) 221, 227, 245, 1221, 1282, 1433, 1443
Bso31I GGTCTC 1 cut(s) 1652
BsoBI CYCGRG 1 cut(s) 1991
Bsp1286I GDGCHC 2 cut(s) 1176, 1992
Bsp1407I TGTACA 1 cut(s) 1040
Bsp143I GATC 4 cut(s) 1030, 1125, 1267, 1305
BspACI CCGC 7 cut(s) 25, 37, 60, 76, 103, 126, 251
BspANI GGCC 7 cut(s) 221, 227, 245, 1221, 1282, 1433, 1443
BspCNI CTCAG 2 cut(s) 1090, 1558
BspHI TCATGA 2 cut(s) 1012, 1864
BspLI GGNNCC 3 cut(s) 58, 903, 2022
BspMI ACCTGC 1 cut(s) 1496
BspPI GGATC 2 cut(s) 1133, 1275
BspTI CTTAAG 2 cut(s) 1352, 1702
BspTNI GGTCTC 1 cut(s) 1652
BsrBI CCGCTC 2 cut(s) 39, 105
BsrFI RCCGGY 2 cut(s) 53, 217
BsrGI TGTACA 1 cut(s) 1040
BsrI ACTGG 4 cut(s) 192, 214, 301, 1434
BssAI RCCGGY 2 cut(s) 53, 217
BssECI CCNNGG 3 cut(s) 222, 246, 1651
BssMI GATC 4 cut(s) 1030, 1125, 1267, 1305
BssNI GRCGYC 1 cut(s) 72
BssT1I CCWWGG 2 cut(s) 222, 1651
Bst4CI ACNGT 6 cut(s) 406, 604, 1591, 1603, 1849, 1858
Bst6I CTCTTC 1 cut(s) 1257
BstACI GRCGYC 1 cut(s) 72
BstAFI CTTAAG 2 cut(s) 1352, 1702
BstAPI GCANNNNNTGC 3 cut(s) 991, 1727, 2086
BstAUI TGTACA 1 cut(s) 1040
BstC8I GCNNGC 8 cut(s) 55, 76, 219, 1369, 1723, 1939, 2091, 2103
BstDEI CTNAG 4 cut(s) 1098, 1566, 2052, 2139
BstDSI CCRYGG 1 cut(s) 246
BstF5I GGATG 8 cut(s) 421, 730, 784, 832, 879, 928, 1457, 1780
BstH2I RGCGCY 1 cut(s) 1206
BstHHI GCGC 3 cut(s) 754, 820, 1205
BstKTI GATC 4 cut(s) 1033, 1128, 1270, 1308
BstMAI GTCTC 4 cut(s) 1075, 1592, 1621, 1652
BstMBI GATC 4 cut(s) 1030, 1125, 1267, 1305
BstMWI GCNNNNNNNGC 9 cut(s) 59, 736, 925, 991, 1118, 1232, 1525, 1727, 2086
BstSCI CCNGG 2 cut(s) 290, 347
BstV1I GCAGC 4 cut(s) 1129, 1130, 1168, 1625
BstV2I GAAGAC 3 cut(s) 485, 1221, 1927
BstX2I RGATCY 1 cut(s) 1267
BstYI RGATCY 1 cut(s) 1267
BsuRI GGCC 7 cut(s) 221, 227, 245, 1221, 1282, 1433, 1443
BtgI CCRYGG 1 cut(s) 246
BtrI CACGTC 1 cut(s) 423
BtsCI GGATG 8 cut(s) 421, 730, 784, 832, 879, 928, 1457, 1780
BtsIMutI CAGTG 3 cut(s) 609, 1596, 1845
BveI ACCTGC 1 cut(s) 1496
Cac8I GCNNGC 8 cut(s) 55, 76, 219, 1369, 1723, 1939, 2091, 2103
CciI TCATGA 2 cut(s) 1012, 1864
CfoI GCGC 3 cut(s) 754, 820, 1205
Cfr10I RCCGGY 2 cut(s) 53, 217
Cfr13I GGNCC 2 cut(s) 901, 1442
CseI GACGC 2 cut(s) 80, 1215
Csp6I GTAC 3 cut(s) 1041, 1464, 1837
CspCI CAANNNNNGTGG 2 cut(s) 1032, 1067
CviAII CATG 4 cut(s) 1013, 1122, 1744, 1865
CviQI GTAC 3 cut(s) 1041, 1464, 1837
DdeI CTNAG 4 cut(s) 1098, 1566, 2052, 2139
DpnI GATC 4 cut(s) 1032, 1127, 1269, 1307
DpnII GATC 4 cut(s) 1030, 1125, 1267, 1305
DraI TTTAAA 1 cut(s) 1581
DriI GACNNNNNGTC 1 cut(s) 268
EaeI YGGCCR 4 cut(s) 225, 243, 1219, 1431
Eam1104I CTCTTC 1 cut(s) 1257
Eam1105I GACNNNNNGTC 1 cut(s) 268
EarI CTCTTC 1 cut(s) 1257
EciI GGCGGA 3 cut(s) 49, 115, 266
Ecl136II GAGCTC 1 cut(s) 1990
Eco130I CCWWGG 2 cut(s) 222, 1651
Eco24I GRGCYC 1 cut(s) 1992
Eco31I GGTCTC 1 cut(s) 1652
Eco47I GGWCC 1 cut(s) 901
Eco53kI GAGCTC 1 cut(s) 1990
Eco57I CTGAAG 3 cut(s) 725, 881, 1241
Eco88I CYCGRG 1 cut(s) 1991
EcoICRI GAGCTC 1 cut(s) 1990
EcoO109I RGGNCCY 1 cut(s) 901
EcoRI GAATTC 2 cut(s) 334, 578
EcoT14I CCWWGG 2 cut(s) 222, 1651
EcoT38I GRGCYC 1 cut(s) 1992
ErhI CCWWGG 2 cut(s) 222, 1651
FaeI CATG 4 cut(s) 1016, 1125, 1747, 1868
FalI AAGNNNNNCTT 6 cut(s) 1254, 1286, 1503, 1535, 1800, 1832
FaqI GGGAC 1 cut(s) 307
FatI CATG 4 cut(s) 1012, 1121, 1743, 1864
FauI CCCGC 1 cut(s) 83
Fnu4HI GCNGC 4 cut(s) 1119, 1143, 1157, 1614
FokI GGATG 8 cut(s) 428, 737, 791, 839, 886, 935, 1464, 1787
FriOI GRGCYC 1 cut(s) 1992
Fsp4HI GCNGC 4 cut(s) 1119, 1143, 1157, 1614
FspBI CTAG 4 cut(s) 1766, 1958, 1970, 1977
GlaI GCGC 3 cut(s) 753, 819, 1204
GluI GCNGC 4 cut(s) 1119, 1143, 1157, 1614
GsaI CCCAGC 1 cut(s) 1487
GsuI CTGGAG 4 cut(s) 680, 1057, 1227, 1268
HaeII RGCGCY 1 cut(s) 1206
HaeIII GGCC 7 cut(s) 221, 227, 245, 1221, 1282, 1433, 1443
HapII CCGG 8 cut(s) 54, 218, 239, 291, 348, 518, 803, 821
HgaI GACGC 2 cut(s) 80, 1215
HhaI GCGC 3 cut(s) 754, 820, 1205
Hin1I GRCGYC 1 cut(s) 72
Hin1II CATG 4 cut(s) 1016, 1125, 1747, 1868
Hin6I GCGC 3 cut(s) 752, 818, 1203
HinP1I GCGC 3 cut(s) 752, 818, 1203
HindIII AAGCTT 2 cut(s) 368, 737
HinfI GANTC 8 cut(s) 120, 269, 287, 521, 571, 745, 1357, 1966
HpaII CCGG 8 cut(s) 54, 218, 239, 291, 348, 518, 803, 821
HphI GGTGA 4 cut(s) 475, 929, 1520, 1724
Hpy166II GTNNAC 3 cut(s) 314, 1041, 1490
Hpy188I TCNGA 6 cut(s) 283, 652, 744, 1099, 1290, 2073
Hpy8I GTNNAC 3 cut(s) 314, 1041, 1490
Hpy99I CGWCG 2 cut(s) 74, 233
HpyCH4III ACNGT 6 cut(s) 406, 604, 1591, 1603, 1849, 1858
HpyCH4IV ACGT 4 cut(s) 310, 316, 422, 1079
HpyCH4V TGCA 8 cut(s) 670, 1112, 1346, 1505, 1737, 1927, 1937, 2089
HpyF10VI GCNNNNNNNGC 9 cut(s) 59, 736, 925, 991, 1118, 1232, 1525, 1727, 2086
HpyF3I CTNAG 4 cut(s) 1098, 1566, 2052, 2139
HpySE526I ACGT 4 cut(s) 310, 316, 422, 1079
Hsp92I GRCGYC 1 cut(s) 72
Hsp92II CATG 4 cut(s) 1016, 1125, 1747, 1868
HspAI GCGC 3 cut(s) 752, 818, 1203
KroI GCCGGC 2 cut(s) 53, 217
KroNI GCCGGC 2 cut(s) 55, 219
Kzo9I GATC 4 cut(s) 1030, 1125, 1267, 1305
LmnI GCTCC 7 cut(s) 24, 44, 62, 110, 1208, 1525, 2026
Lsp1109I GCAGC 4 cut(s) 1129, 1130, 1168, 1625
LweI GCATC 5 cut(s) 769, 789, 1803, 1963, 2076
MaeI CTAG 4 cut(s) 1766, 1958, 1970, 1977
MaeII ACGT 4 cut(s) 310, 316, 422, 1079
MaeIII GTNAC 4 cut(s) 400, 418, 761, 876
MalI GATC 4 cut(s) 1032, 1127, 1269, 1307
MbiI CCGCTC 2 cut(s) 39, 105
MboI GATC 4 cut(s) 1030, 1125, 1267, 1305
MfeI CAATTG 3 cut(s) 1034, 1410, 1500
MflI RGATCY 1 cut(s) 1267
MhlI GDGCHC 2 cut(s) 1176, 1992
MlsI TGGCCA 2 cut(s) 245, 1433
MluNI TGGCCA 2 cut(s) 245, 1433
MlyI GAGTC 2 cut(s) 278, 580
MmeI TCCRAC 3 cut(s) 174, 430, 660
Mox20I TGGCCA 2 cut(s) 245, 1433
MroNI GCCGGC 2 cut(s) 53, 217
MroXI GAANNNNTTC 2 cut(s) 1093, 1693
MscI TGGCCA 2 cut(s) 245, 1433
MseI TTAA 8 cut(s) 366, 630, 1353, 1580, 1703, 1893, 1911, 2152
Msp20I TGGCCA 2 cut(s) 245, 1433
MspCI CTTAAG 2 cut(s) 1352, 1702
MspI CCGG 8 cut(s) 54, 218, 239, 291, 348, 518, 803, 821
MspR9I CCNGG 2 cut(s) 292, 349
MunI CAATTG 3 cut(s) 1034, 1410, 1500
MwoI GCNNNNNNNGC 9 cut(s) 59, 736, 925, 991, 1118, 1232, 1525, 1727, 2086
NaeI GCCGGC 2 cut(s) 55, 219
NciI CCSGG 2 cut(s) 292, 349
NdeII GATC 4 cut(s) 1030, 1125, 1267, 1305
NgoMIV GCCGGC 2 cut(s) 53, 217
NlaIII CATG 4 cut(s) 1016, 1125, 1747, 1868
NlaIV GGNNCC 3 cut(s) 58, 903, 2022
NmuCI GTSAC 4 cut(s) 400, 418, 761, 876
PaeR7I CTCGAG 1 cut(s) 1991
PagI TCATGA 2 cut(s) 1012, 1864
PaqCI CACCTGC 1 cut(s) 1496
PdiI GCCGGC 2 cut(s) 55, 219
PdmI GAANNNNTTC 2 cut(s) 1093, 1693
PfeI GAWTC 6 cut(s) 120, 287, 521, 745, 1357, 1966
PflMI CCANNNNNTGG 1 cut(s) 960
PfoI TCCNGGA 2 cut(s) 290, 347
PkrI GCNGC 4 cut(s) 1120, 1144, 1158, 1615
PleI GAGTC 2 cut(s) 277, 579
PpsI GAGTC 2 cut(s) 277, 579
PpuMI RGGWCCY 1 cut(s) 901
PsiI TTATAA 1 cut(s) 1880
Psp124BI GAGCTC 1 cut(s) 1992
Psp5II RGGWCCY 1 cut(s) 901
PspFI CCCAGC 1 cut(s) 1483
PspN4I GGNNCC 3 cut(s) 58, 903, 2022
PspPI GGNCC 2 cut(s) 901, 1442
PspPPI RGGWCCY 1 cut(s) 901
PspXI VCTCGAGB 1 cut(s) 1991
PsuI RGATCY 1 cut(s) 1267
RsaI GTAC 3 cut(s) 1042, 1465, 1838
RsaNI GTAC 3 cut(s) 1041, 1464, 1837
SacI GAGCTC 1 cut(s) 1992
SaqAI TTAA 8 cut(s) 366, 630, 1353, 1580, 1703, 1893, 1911, 2152
SatI GCNGC 4 cut(s) 1119, 1143, 1157, 1614
Sau3AI GATC 4 cut(s) 1030, 1125, 1267, 1305
Sau96I GGNCC 2 cut(s) 901, 1442
ScaI AGTACT 1 cut(s) 1465
SchI GAGTC 2 cut(s) 278, 580
ScrFI CCNGG 2 cut(s) 292, 349
SduI GDGCHC 2 cut(s) 1176, 1992
SfaNI GCATC 5 cut(s) 769, 789, 1803, 1963, 2076
Sfr274I CTCGAG 1 cut(s) 1991
SinI GGWCC 1 cut(s) 901
SlaI CTCGAG 1 cut(s) 1991
SmiI ATTTAAAT 1 cut(s) 1581
SmlI CTYRAG 6 cut(s) 766, 1352, 1595, 1702, 1817, 1991
SmoI CTYRAG 6 cut(s) 766, 1352, 1595, 1702, 1817, 1991
SsiI CCGC 7 cut(s) 25, 37, 60, 76, 103, 126, 251
SspMI CTAG 4 cut(s) 1766, 1958, 1970, 1977
SstI GAGCTC 1 cut(s) 1992
StyD4I CCNGG 2 cut(s) 290, 347
StyI CCWWGG 2 cut(s) 222, 1651
SwaI ATTTAAAT 1 cut(s) 1581
TaaI ACNGT 6 cut(s) 406, 604, 1591, 1603, 1849, 1858
TaiI ACGT 4 cut(s) 313, 319, 425, 1082
TaqII GACCGA 2 cut(s) 1032, 1884
TatI WGTACW 3 cut(s) 1040, 1463, 1836
TfiI GAWTC 6 cut(s) 120, 287, 521, 745, 1357, 1966
Tru1I TTAA 8 cut(s) 366, 630, 1353, 1580, 1703, 1893, 1911, 2152
Tru9I TTAA 8 cut(s) 366, 630, 1353, 1580, 1703, 1893, 1911, 2152
TscAI CASTG 3 cut(s) 609, 1596, 1852
TseFI GTSAC 4 cut(s) 400, 418, 761, 876
TseI GCWGC 4 cut(s) 1118, 1142, 1156, 1613
Tsp45I GTSAC 4 cut(s) 400, 418, 761, 876
TspDTI ATGAA 5 cut(s) 321, 569, 1316, 1732, 1791
TspRI CASTG 3 cut(s) 609, 1596, 1852
Van91I CCANNNNNTGG 1 cut(s) 960
Vha464I CTTAAG 2 cut(s) 1352, 1702
VpaK11BI GGWCC 1 cut(s) 901
XapI RAATTY 3 cut(s) 334, 578, 1213
XbaI TCTAGA 2 cut(s) 1957, 1969
XcmI CCANNNNNNNNNTGG 2 cut(s) 206, 1789
XhoI CTCGAG 1 cut(s) 1991
XmnI GAANNNNTTC 2 cut(s) 1093, 1693
XspI CTAG 4 cut(s) 1766, 1958, 1970, 1977
ZrmI AGTACT 1 cut(s) 1465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.