Rorug02G0455300

Domain of unknown function (DUF4283)

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
58482053 .. 58487026
4974 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0455300.1

Sequence Viewer

Length: 1380 bp
ATGAGTAGGCTCTCATTCAGGCCTCGGCCCCTCGACATCCACAAGAGGCTCCCCGTCGTCAAGTCTTTCAAGGACTTCGAAGACGATGAAGCCGCCCCCACCTCCACCCGCAATTCTCAGCTCCTCCGTCTCTCCGCCGTCGACTCCTCCTCCGCCTCCGCCTCCGCCACCGAAATCGAGGTCCACCCTCCCCCCGCCAAGAAGCTAGCCCCTGAAATCCCGACTCCTCAGTTTGTTGTTGTTGATACTTATGAGAGAGACTACTCTCGCACTTTTGCCCAACCCAATTCCTATCTCCGCGCCAGAGGAGCCCGGGCCGAGCTCGGAGAGTTTGTGGAGTATGATTTAGATAATGAGGATGAGGATTGGCTTGAAGAGTTCAATGGTGAGGAGGAAATTCTTCCTGCCGAAAAGCTTGAGAGTCTTATTTTCAAGCTGGAGGTTTTCGATCATAAGGCTCGGGAGAGAGCAGGAGTTATAACCCCTACTCTTGCTTCACCAATCCCTGTACTTCTACAACTTGATGTCGCTACTGAGGCTCTACAAGGTCAGTCCCTCAGATATGCTGTCATCCGGTCTGTTTATGAGTATTGGAGAGATAAGCGTGAAAGATGGCAGAAGCCTATCTTGCGACGTTTGCAGCCTCCTCCACCGGTTAATGATACCAACCCATACAATGTCTTCAGGCCAAGGGAGAAAACCCACAGACTGCACACGAGAAGGATGCAAAGAAGGGAAAACAATGTGCAATCATTTGAAAAGCTTCGCCAGGTTAGGCGCAACCTGGACCAAGCCAAGACCATTGTGGAGGCTTTAATCAAGAGAGAAGAAAAAAAGAGAGCAGTCATGGAGGCTGAAGTGGAGCTTCAAGTAAATCAAATGAAGTACAAGCATGAGACACTGCTCCTGGAAGATAGTTTAGTCCTTCCTGGTTTTCCACCCATGTCTTCCAAGTTTGTTTCAAGTGAGGAGGAAAATGTTGATTCAGATGACTTTGAAAACAGTCGGCCTCGTACACGACCTTCTGCACTGCCTAATCCGCCTTTACCAGACCCCAACTTGATCACGGGAACCATGAAGCAAGATTTCAGGCGTCGGCATGCACCTCAAGGGTGGCTTCATAAAATGGATCCCCTCGAGCCAGTTTTGTTATTTACAAAACCTCTAGTTCCAGAGAAGTTGGCAGCTGCAGGCATTGTACCACCATCAGATTCTTCAACGAAAAATGGAGTAACCACAGCACCTTTTAAATTCCGCGGAAGAATTGGCCGAGGGGGCCGATTAATATTTGATAGATGGAACCCATTGATGCACACTCCAATCGACTTTGGGAATTCATATTATATACCTCCTAAACCTCGACCAACAACATATAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

459

Amino Acids

52.91

Weight (kDa)

8.93

Isoelectric Point (pI)

65.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EPL1 PF10513 11 - 147 7.3e-11 Enhancer of polycomb-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01050
fragaria_vesca FvH4_1g24181 FvH4_1g28741 FvH4_1g29781 FvH4_2g00621 FvH4_2g04885 FvH4_2g11953 FvH4_2g11954 FvH4_2g12001 FvH4_2g12002 FvH4_2g12222 FvH4_2g12223 FvH4_2g38351 FvH4_3g04401 FvH4_3g31330 FvH4_3g33091 FvH4_4g11461 FvH4_5g27993 FvH4_5g27994 FvH4_5g28072 FvH4_5g28231 FvH4_5g28591 FvH4_5g34261 FvH4_6g18162 FvH4_6g25500 FvH4_6g25561 FvH4_6g25792 FvH4_6g27602 FvH4_6g46881
malus_domestica MD03G1019700.v1.1
prunus_persica Prupe.1G055400_v2.0.a1 Prupe.1G179200_v2.0.a1 Prupe.1G208200_v2.0.a1 Prupe.1G231200_v2.0.a1 Prupe.2G044900_v2.0.a1 Prupe.2G055100_v2.0.a1 Prupe.2G097600_v2.0.a1 Prupe.2G114200_v2.0.a1 Prupe.3G109000_v2.0.a1 Prupe.3G109300_v2.0.a1 Prupe.3G109600_v2.0.a1 Prupe.4G246900_v2.0.a1 Prupe.5G026400_v2.0.a1
pyrus_communis pycom05g17130 pycom07g06820 pycom07g18590 pycom07g22730 pycom12401g00120 pycom12401g00180 pycom420g00470
rosa_chinensis RchiOBHm_Chr1g0342591 RchiOBHm_Chr1g0342601 RchiOBHm_Chr1g0342611 RchiOBHm_Chr1g0351011 RchiOBHm_Chr2g0146151 RchiOBHm_Chr2g0171821 RchiOBHm_Chr3g0492921 RchiOBHm_Chr3g0492931 RchiOBHm_Chr4g0406871 RchiOBHm_Chr4g0426311 RchiOBHm_Chr5g0020721 RchiOBHm_Chr5g0050111 RchiOBHm_Chr5g0051681 RchiOBHm_Chr5g0053531 RchiOBHm_Chr5g0054841 RchiOBHm_Chr5g0055061 RchiOBHm_Chr5g0055071 RchiOBHm_Chr6g0248911 RchiOBHm_Chr6g0291741 RchiOBHm_Chr7g0187781 RchiOBHm_Chr7g0220081 RchiOBHm_Chr7g0224391 RchiOBHm_Chr7g0235221
rosa_laevigata RLG00000002133 RLG00000002402 RLG00000002736 RLG00000011046 RLG00000013214 RLG00000016550 RLG00000021669 RLG00000022948 RLG00000023691 RLG00000024682 RLG00000027826 RLG00000029734 RLG00000029831 RLG00000030305 RLG00000037042
rosa_multiflora Rmu_co7992532.1_g000001 Rmu_co8021462.1_g000001 Rmu_co8229237.1_g000001 Rmu_co8281571.1_g000001 Rmu_co8326451.1_g000001 Rmu_co8359553.1_g000001 Rmu_co8372117.1_g000001 Rmu_co8427177.1_g000001 Rmu_co8474063.1_g000002 Rmu_sc0000007.1_g000020 Rmu_sc0000173.1_g000002 Rmu_sc0000367.1_g000086 Rmu_sc0000367.1_g000088 Rmu_sc0000559.1_g000002 Rmu_sc0000733.1_g000014 Rmu_sc0000745.1_g000006 Rmu_sc0000791.1_g000046 Rmu_sc0000791.1_g000049 Rmu_sc0000824.1_g000010 Rmu_sc0000824.1_g000011 Rmu_sc0000834.1_g000009 Rmu_sc0000834.1_g000011 Rmu_sc0000911.1_g000020 Rmu_sc0000935.1_g000034 Rmu_sc0000935.1_g000051 Rmu_sc0000935.1_g000053 Rmu_sc0001000.1_g000005 Rmu_sc0001000.1_g000006 Rmu_sc0001150.1_g000004 Rmu_sc0001227.1_g000002 Rmu_sc0001322.1_g000018 Rmu_sc0001343.1_g000001 Rmu_sc0001356.1_g000004 Rmu_sc0001356.1_g000005 Rmu_sc0001363.1_g000007 Rmu_sc0001463.1_g000012 Rmu_sc0001484.1_g000023 Rmu_sc0001516.1_g000003 Rmu_sc0001516.1_g000005 Rmu_sc0001619.1_g000005 Rmu_sc0001648.1_g000032 Rmu_sc0001648.1_g000035 Rmu_sc0001694.1_g000008 Rmu_sc0001809.1_g000023 Rmu_sc0002093.1_g000027 Rmu_sc0002231.1_g000004 Rmu_sc0002245.1_g000001 Rmu_sc0002245.1_g000003 Rmu_sc0002354.1_g000045 Rmu_sc0002354.1_g000048 Rmu_sc0002368.1_g000014 Rmu_sc0002368.1_g000016 Rmu_sc0002368.1_g000017 Rmu_sc0002401.1_g000030 Rmu_sc0002487.1_g000012 Rmu_sc0002798.1_g000028 Rmu_sc0002923.1_g000012 Rmu_sc0002960.1_g000002 Rmu_sc0003033.1_g000072 Rmu_sc0003133.1_g000015 Rmu_sc0003168.1_g000007 Rmu_sc0003945.1_g000002 Rmu_sc0003945.1_g000004 Rmu_sc0003945.1_g000005 Rmu_sc0003979.1_g000004 Rmu_sc0004005.1_g000007 Rmu_sc0004059.1_g000018 Rmu_sc0004064.1_g000001 Rmu_sc0004083.1_g000007 Rmu_sc0004083.1_g000008 Rmu_sc0004354.1_g000033 Rmu_sc0004368.1_g000035 Rmu_sc0004483.1_g000032 Rmu_sc0004646.1_g000012 Rmu_sc0005014.1_g000006 Rmu_sc0005016.1_g000046 Rmu_sc0005016.1_g000051 Rmu_sc0005033.1_g000005 Rmu_sc0005033.1_g000007 Rmu_sc0005065.1_g000002 Rmu_sc0005065.1_g000004 Rmu_sc0005168.1_g000012 Rmu_sc0005238.1_g000001 Rmu_sc0005365.1_g000012 Rmu_sc0005631.1_g000005 Rmu_sc0005704.1_g000013 Rmu_sc0005704.1_g000014 Rmu_sc0005781.1_g000030 Rmu_sc0005789.1_g000016 Rmu_sc0006185.1_g000001 Rmu_sc0006185.1_g000002 Rmu_sc0006266.1_g000044 Rmu_sc0006561.1_g000018 Rmu_sc0006695.1_g000016 Rmu_sc0007739.1_g000022 Rmu_sc0008050.1_g000013 Rmu_sc0008169.1_g000006 Rmu_sc0008855.1_g000006 Rmu_sc0009298.1_g000002 Rmu_sc0009495.1_g000005 Rmu_sc0010608.1_g000003 Rmu_sc0010958.1_g000005 Rmu_sc0011506.1_g000001 Rmu_sc0011790.1_g000002 Rmu_sc0011790.1_g000003 Rmu_sc0012042.1_g000004 Rmu_sc0012042.1_g000005 Rmu_sc0012140.1_g000020 Rmu_sc0012726.1_g000005 Rmu_sc0012746.1_g000023 Rmu_sc0013193.1_g000002 Rmu_sc0013193.1_g000003 Rmu_sc0017997.1_g000001 Rmu_sc0021401.1_g000001 Rmu_sc0025959.1_g000001 Rmu_sc0026403.1_g000003 Rmu_sc0028616.1_g000002 Rmu_sc0029801.1_g000002 Rmu_sc0032453.1_g000001 Rmu_sc0033672.1_g000002 Rmu_sc0034553.1_g000001 Rmu_sc0036883.1_g000001 Rmu_ssc0000096.1_g000001 Rmu_ssc0000158.1_g000031 Rmu_ssc0000291.1_g000034 Rmu_ssc0000381.1_g000026 Rmu_ssc0000387.1_g000010 Rmu_ssc0000474.1_g000002 Rmu_ssc0000474.1_g000004
rosa_roxburghii Rroxscaffold_1G00020090 Rroxscaffold_1G00020100 Rroxscaffold_1G00022940 Rroxscaffold_1G00044600 Rroxscaffold_1G00054420 Rroxscaffold_1G00054430 Rroxscaffold_1G00056440 Rroxscaffold_2G00090180 Rroxscaffold_2G00101250 Rroxscaffold_2G00110600 Rroxscaffold_2G00152800 Rroxscaffold_4G00320370 Rroxscaffold_4G00320640 Rroxscaffold_4G00322420 Rroxscaffold_4G00324670 Rroxscaffold_5G00332760 Rroxscaffold_5G00345010 Rroxscaffold_5G00345020 Rroxscaffold_5G00355470 Rroxscaffold_5G00385520 Rroxscaffold_6G00394610 Rroxscaffold_6G00394700 Rroxscaffold_7G00164190 Rroxscaffold_7G00182750 Rroxscaffold_7G00183540 Rroxscaffold_7G00203520 Rroxscaffold_7G00211630
rosa_rugosa Rorug01G0041400 Rorug01G0041500 Rorug01G0065300 Rorug01G0065300 Rorug01G0069700 Rorug01G0069800 Rorug01G0070300 Rorug01G0072300 Rorug01G0072900 Rorug01G0093100 Rorug01G0147100.1 Rorug01G0196900 Rorug01G0259700 Rorug02G0162000 Rorug02G0182700 Rorug02G0212300 Rorug02G0214700 Rorug02G0229900 Rorug02G0246100 Rorug02G0257400 Rorug02G0259100 Rorug02G0341400 Rorug02G0341500 Rorug02G0341700 Rorug02G0341800 Rorug02G0355600 Rorug02G0386100 Rorug02G0386100 Rorug02G0387000 Rorug02G0387100 Rorug02G0388400 Rorug02G0388500 Rorug02G0429100 Rorug02G0429100 Rorug02G0455300 Rorug02G0634400 Rorug03G0163200 Rorug03G0198500 Rorug03G0199600 Rorug03G0204000 Rorug03G0265600 Rorug03G0266100 Rorug03G0266200 Rorug03G0280600 Rorug03G0348200 Rorug03G0349700 Rorug03G0349800 Rorug04G0020200 Rorug04G0073700 Rorug04G0215000 Rorug04G0426100 Rorug05G0064200 Rorug05G0064300 Rorug05G0265700 Rorug05G0287400 Rorug05G0287500 Rorug05G0287500 Rorug05G0405000 Rorug05G0525700 Rorug05G0525800 Rorug05G0588200 Rorug06G0038200 Rorug06G0057900 Rorug06G0058000 Rorug06G0058500 Rorug06G0058600 Rorug06G0116700 Rorug06G0159300.1 Rorug06G0159400 Rorug06G0174700 Rorug06G0375500 Rorug07G0091400 Rorug07G0094900 Rorug07G0108100 Rorug07G0140700 Rorug07G0140700 Rorug07G0207100 Rorug07G0207100 Rorug07G0207200 Rorug07G0287300
rosa_samantha Rh1AG100100 Rh1AG104500 Rh1BG150700 Rh1BG237700 Rh1BG334000 Rh1CG090000 Rh1CG100100 Rh1CG347300 Rh1DG090500 Rh1DG096100 Rh1DG107400 Rh1DG182500 Rh1DG265700 Rh1DG365200 Rh2BG256800 Rh2BG361300 Rh2BG468600 Rh2BG549800 Rh2CG270900 Rh2DG276700 Rh2DG276800 Rh2DG377700 Rh2DG477900 Rh3AG161200 Rh3BG138800 Rh3BG185700 Rh3BG269600 Rh3CG176000 Rh4AG006100 Rh4AG216700 Rh4AG355800 Rh4CG108600 Rh5AG141700 Rh5AG480000 Rh5BG014500 Rh5BG134600 Rh5BG295400 Rh5BG552900 Rh5CG058600 Rh5CG286400 Rh5CG350900 Rh5CG575800 Rh5DG004300 Rh5DG254600 Rh5DG356500 Rh6AG106500 Rh6AG191100 Rh6AG224700 Rh6BG074700 Rh6BG181400 Rh6BG352200 Rh6BG408400 Rh6BG453600 Rh6CG047400 Rh6CG172200 Rh6CG189400 Rh6CG515800 Rh6DG042900 Rh6DG163400 Rh7AG089300 Rh7AG227400 Rh7AG275600 Rh7AG375100 Rh7AG460900 Rh7AG485200 Rh7BG146100 Rh7BG354300 Rh7CG077100 Rh7CG294500 Rh7CG393800 Rh7DG041700 Rh7DG062700 Rh7DG091700 Rh7DG178900 Rh7DG192300 Rh7DG297000 Rh7DG403600 Rh7DG411800
rosa_wichuraiana Rw0G007100 Rw0G011430 Rw1G003580 Rw1G004040 Rw1G005880 Rw1G009860 Rw1G009990 Rw1G012190 Rw1G012200 Rw1G013740 Rw1G013750 Rw1G016710 Rw1G021050 Rw2G023790 Rw2G028810 Rw2G035890 Rw2G036250 Rw4G008880 Rw4G014380 Rw4G014390 Rw4G016020 Rw4G037160 Rw5G010060 Rw5G030620 Rw5G033840 Rw5G049840 Rw5G049850 Rw6G003450 Rw6G015080 Rw7G019640 Rw7G024060 Rw7G024070 Rw7G029090 Rw7G037010 Rw7G039170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 479
AccI GTMKAC 1 cut(s) 141
AccII CGCG 2 cut(s) 300, 1257
AclWI GGATC 2 cut(s) 1124, 1137
AcoI YGGCCR 1 cut(s) 1267
AcsI RAATTY 3 cut(s) 396, 1250, 1333
AcuI CTGAAG 2 cut(s) 667, 876
AcyI GRCGYC 1 cut(s) 1093
AfaI GTAC 4 cut(s) 510, 887, 1015, 1200
AgeI ACCGGT 1 cut(s) 652
AgsI TTSAA 9 cut(s) 70, 374, 382, 433, 758, 869, 963, 998, 1218
AjnI CCWGG 4 cut(s) 768, 783, 906, 928
AluBI AGCT 8 cut(s) 121, 205, 322, 415, 436, 763, 865, 1187
AluI AGCT 8 cut(s) 121, 205, 322, 415, 436, 763, 865, 1187
Alw21I GWGCWC 1 cut(s) 324
Alw26I GTCTC 3 cut(s) 134, 252, 890
AlwI GGATC 2 cut(s) 1124, 1137
Ama87I CYCGRG 3 cut(s) 312, 459, 1136
AoxI GGCC 7 cut(s) 20, 26, 315, 686, 1007, 1267, 1276
ApeKI GCWGC 3 cut(s) 640, 1184, 1187
ApoI RAATTY 3 cut(s) 396, 1250, 1333
ArsI GACNNNNNNTTYG 2 cut(s) 165, 197
AseI ATTAAT 1 cut(s) 1283
AsiGI ACCGGT 1 cut(s) 652
Asp700I GAANNNNTTC 2 cut(s) 399, 762
AspLEI GCGC 2 cut(s) 302, 780
AspS9I GGNCC 5 cut(s) 27, 181, 315, 787, 1276
AsuC2I CCSGG 2 cut(s) 313, 314
AsuHPI GGTGA 2 cut(s) 398, 489
AsuII TTCGAA 1 cut(s) 78
AsuNHI GCTAGC 1 cut(s) 205
AvaI CYCGRG 3 cut(s) 312, 459, 1136
AvaII GGWCC 2 cut(s) 181, 787
BamHI GGATCC 1 cut(s) 1129
BanII GRGCYC 2 cut(s) 313, 324
BarI GAAGNNNNNNTAC 2 cut(s) 1006, 1038
BauI CACGAG 1 cut(s) 715
BbsI GAAGAC 3 cut(s) 87, 673, 939
Bbv12I GWGCWC 1 cut(s) 324
BbvI GCAGC 3 cut(s) 652, 1174, 1196
BccI CCATC 3 cut(s) 606, 1213, 1290
BceAI ACGGC 1 cut(s) 122
BcgI CGANNNNNNTGC 2 cut(s) 706, 740
BciT130I CCWGG 4 cut(s) 770, 785, 908, 930
BclI TGATCA 1 cut(s) 1062
BcnI CCSGG 2 cut(s) 313, 314
BcoDI GTCTC 3 cut(s) 134, 252, 890
BfaI CTAG 2 cut(s) 206, 1166
BfmI CTRYAG 1 cut(s) 1188
BglI GCCNNNNNGGC 1 cut(s) 1275
BisI GCNGC 4 cut(s) 93, 641, 1185, 1188
BlsI GCNGC 4 cut(s) 94, 642, 1186, 1189
Bme1390I CCNGG 6 cut(s) 313, 314, 770, 785, 908, 930
Bme18I GGWCC 2 cut(s) 181, 787
BmeT110I CYCGRG 3 cut(s) 312, 459, 1136
BmgT120I GGNCC 5 cut(s) 27, 181, 315, 787, 1276
BmiI GGNNCC 7 cut(s) 29, 50, 310, 1072, 1131, 1277, 1301
BmrFI CCNGG 6 cut(s) 313, 314, 770, 785, 908, 930
BmsI GCATC 2 cut(s) 714, 1299
BmtI GCTAGC 1 cut(s) 209
BpiI GAAGAC 3 cut(s) 87, 673, 939
BpmI CTGGAG 1 cut(s) 458
Bpu14I TTCGAA 1 cut(s) 78
BpuEI CTTGAG 2 cut(s) 437, 1092
BpuMI CCSGG 2 cut(s) 313, 314
BsaHI GRCGYC 1 cut(s) 1093
BsaJI CCNNGG 5 cut(s) 23, 312, 689, 1255, 1270
BsaWI WCCGGW 2 cut(s) 573, 652
BsaXI ACNNNNNCTCC 4 cut(s) 134, 164, 318, 348
Bse118I RCCGGY 1 cut(s) 652
Bse1I ACTGG 1 cut(s) 1142
BseBI CCWGG 4 cut(s) 770, 785, 908, 930
BseDI CCNNGG 5 cut(s) 23, 312, 689, 1255, 1270
BseGI GGATG 4 cut(s) 36, 364, 570, 729
BseMII CTCAG 4 cut(s) 131, 242, 525, 571
BseNI ACTGG 1 cut(s) 1142
BseRI GAGGAG 8 cut(s) 113, 136, 139, 216, 321, 404, 636, 983
BseXI GCAGC 3 cut(s) 652, 1174, 1196
BsgI GTGCAG 2 cut(s) 695, 1011
Bsh1236I CGCG 2 cut(s) 300, 1257
BshFI GGCC 7 cut(s) 22, 28, 317, 688, 1009, 1269, 1278
BshTI ACCGGT 1 cut(s) 652
BsiHKAI GWGCWC 1 cut(s) 324
BsiHKCI CYCGRG 3 cut(s) 312, 459, 1136
BsiSI CCGG 3 cut(s) 313, 574, 653
BslFI GGGAC 1 cut(s) 538
BsmAI GTCTC 3 cut(s) 134, 252, 890
BsmBI CGTCTC 1 cut(s) 134
BsmFI GGGAC 1 cut(s) 538
BsnI GGCC 7 cut(s) 22, 28, 317, 688, 1009, 1269, 1278
BsoBI CYCGRG 3 cut(s) 312, 459, 1136
Bsp119I TTCGAA 1 cut(s) 78
Bsp1286I GDGCHC 2 cut(s) 313, 324
Bsp143I GATC 3 cut(s) 448, 1062, 1129
BspANI GGCC 7 cut(s) 22, 28, 317, 688, 1009, 1269, 1278
BspCNI CTCAG 4 cut(s) 130, 241, 526, 570
BspFNI CGCG 2 cut(s) 300, 1257
BspLI GGNNCC 7 cut(s) 29, 50, 310, 1072, 1131, 1277, 1301
BspMAI CTGCAG 1 cut(s) 1192
BspOI GCTAGC 1 cut(s) 209
BspPI GGATC 2 cut(s) 1124, 1137
BspT104I TTCGAA 1 cut(s) 78
BsrFI RCCGGY 1 cut(s) 652
BsrI ACTGG 1 cut(s) 1142
BssAI RCCGGY 1 cut(s) 652
BssECI CCNNGG 5 cut(s) 23, 312, 689, 1255, 1270
BssMI GATC 3 cut(s) 448, 1062, 1129
BssNI GRCGYC 1 cut(s) 1093
BssSI CACGAG 1 cut(s) 715
BssT1I CCWWGG 1 cut(s) 689
Bst2BI CACGAG 1 cut(s) 715
Bst2UI CCWGG 4 cut(s) 770, 785, 908, 930
Bst4CI ACNGT 1 cut(s) 1004
Bst6I CTCTTC 1 cut(s) 369
BstACI GRCGYC 1 cut(s) 1093
BstBI TTCGAA 1 cut(s) 78
BstC8I GCNNGC 3 cut(s) 207, 1101, 1192
BstDEI CTNAG 4 cut(s) 117, 228, 534, 557
BstDSI CCRYGG 1 cut(s) 1255
BstF5I GGATG 4 cut(s) 36, 364, 570, 729
BstFNI CGCG 2 cut(s) 300, 1257
BstHHI GCGC 2 cut(s) 302, 780
BstKTI GATC 3 cut(s) 451, 1065, 1132
BstMAI GTCTC 3 cut(s) 134, 252, 890
BstMBI GATC 3 cut(s) 448, 1062, 1129
BstMWI GCNNNNNNNGC 6 cut(s) 308, 536, 628, 637, 1039, 1275
BstNI CCWGG 4 cut(s) 770, 785, 908, 930
BstNSI RCATGY 1 cut(s) 1103
BstSCI CCNGG 6 cut(s) 311, 312, 768, 783, 906, 928
BstSFI CTRYAG 1 cut(s) 1188
BstUI CGCG 2 cut(s) 300, 1257
BstV1I GCAGC 3 cut(s) 652, 1174, 1196
BstV2I GAAGAC 3 cut(s) 87, 673, 939
BstX2I RGATCY 1 cut(s) 1129
BstYI RGATCY 1 cut(s) 1129
BsuRI GGCC 7 cut(s) 22, 28, 317, 688, 1009, 1269, 1278
BtgI CCRYGG 1 cut(s) 1255
BtsCI GGATG 4 cut(s) 36, 364, 570, 729
BtsI GCAGTG 2 cut(s) 899, 1028
BtsIMutI CAGTG 2 cut(s) 899, 1028
Cac8I GCNNGC 3 cut(s) 207, 1101, 1192
CfoI GCGC 2 cut(s) 302, 780
Cfr10I RCCGGY 1 cut(s) 652
Cfr13I GGNCC 5 cut(s) 27, 181, 315, 787, 1276
Cfr42I CCGCGG 1 cut(s) 1258
Cfr9I CCCGGG 1 cut(s) 312
CseI GACGC 1 cut(s) 1082
Csp6I GTAC 4 cut(s) 509, 886, 1014, 1199
CspAI ACCGGT 1 cut(s) 652
CviAII CATG 5 cut(s) 847, 893, 943, 1075, 1100
CviQI GTAC 4 cut(s) 509, 886, 1014, 1199
DdeI CTNAG 4 cut(s) 117, 228, 534, 557
DpnI GATC 3 cut(s) 450, 1064, 1131
DpnII GATC 3 cut(s) 448, 1062, 1129
DraI TTTAAA 1 cut(s) 1249
EaeI YGGCCR 1 cut(s) 1267
Eam1104I CTCTTC 1 cut(s) 369
EarI CTCTTC 1 cut(s) 369
EciI GGCGGA 5 cut(s) 124, 142, 148, 154, 1029
Ecl136II GAGCTC 1 cut(s) 322
Eco130I CCWWGG 1 cut(s) 689
Eco147I AGGCCT 1 cut(s) 22
Eco24I GRGCYC 2 cut(s) 313, 324
Eco47I GGWCC 2 cut(s) 181, 787
Eco53kI GAGCTC 1 cut(s) 322
Eco57I CTGAAG 2 cut(s) 667, 876
Eco88I CYCGRG 3 cut(s) 312, 459, 1136
EcoICRI GAGCTC 1 cut(s) 322
EcoRI GAATTC 1 cut(s) 1333
EcoRII CCWGG 4 cut(s) 768, 783, 906, 928
EcoT14I CCWWGG 1 cut(s) 689
EcoT38I GRGCYC 2 cut(s) 313, 324
ErhI CCWWGG 1 cut(s) 689
Esp3I CGTCTC 1 cut(s) 134
FaeI CATG 5 cut(s) 850, 896, 946, 1078, 1103
FalI AAGNNNNNCTT 6 cut(s) 611, 643, 849, 881, 1101, 1133
FaqI GGGAC 1 cut(s) 538
FatI CATG 5 cut(s) 846, 892, 942, 1074, 1099
FauI CCCGC 2 cut(s) 116, 202
FbaI TGATCA 1 cut(s) 1062
FblI GTMKAC 1 cut(s) 141
Fnu4HI GCNGC 4 cut(s) 93, 641, 1185, 1188
FokI GGATG 4 cut(s) 23, 371, 557, 736
FriOI GRGCYC 2 cut(s) 313, 324
Fsp4HI GCNGC 4 cut(s) 93, 641, 1185, 1188
FspBI CTAG 2 cut(s) 206, 1166
GlaI GCGC 2 cut(s) 301, 779
GluI GCNGC 4 cut(s) 93, 641, 1185, 1188
GsuI CTGGAG 1 cut(s) 458
HaeIII GGCC 7 cut(s) 22, 28, 317, 688, 1009, 1269, 1278
HapII CCGG 3 cut(s) 313, 574, 653
HgaI GACGC 1 cut(s) 1082
HhaI GCGC 2 cut(s) 302, 780
Hin1I GRCGYC 1 cut(s) 1093
Hin1II CATG 5 cut(s) 850, 896, 946, 1078, 1103
Hin6I GCGC 2 cut(s) 300, 778
HinP1I GCGC 2 cut(s) 300, 778
HincII GTYRAC 1 cut(s) 142
HindII GTYRAC 1 cut(s) 142
HindIII AAGCTT 2 cut(s) 413, 761
HinfI GANTC 5 cut(s) 143, 223, 421, 983, 1211
HpaII CCGG 3 cut(s) 313, 574, 653
HphI GGTGA 2 cut(s) 398, 489
Hpy166II GTNNAC 3 cut(s) 142, 184, 1016
Hpy188I TCNGA 4 cut(s) 326, 560, 988, 1210
Hpy188III TCNNGA 4 cut(s) 220, 461, 820, 1172
Hpy8I GTNNAC 3 cut(s) 142, 184, 1016
Hpy99I CGWCG 4 cut(s) 59, 143, 636, 1098
HpyAV CCTTC 4 cut(s) 714, 726, 935, 1032
HpyCH4III ACNGT 1 cut(s) 1004
HpyCH4IV ACGT 1 cut(s) 634
HpyCH4V TGCA 8 cut(s) 640, 712, 727, 748, 1028, 1103, 1190, 1312
HpyF10VI GCNNNNNNNGC 6 cut(s) 308, 536, 628, 637, 1039, 1275
HpyF3I CTNAG 4 cut(s) 117, 228, 534, 557
HpySE526I ACGT 1 cut(s) 634
Hsp92I GRCGYC 1 cut(s) 1093
Hsp92II CATG 5 cut(s) 850, 896, 946, 1078, 1103
HspAI GCGC 2 cut(s) 300, 778
Ksp22I TGATCA 1 cut(s) 1062
KspI CCGCGG 1 cut(s) 1258
Kzo9I GATC 3 cut(s) 448, 1062, 1129
LmnI GCTCC 5 cut(s) 54, 126, 308, 862, 909
Lsp1109I GCAGC 3 cut(s) 652, 1174, 1196
LweI GCATC 2 cut(s) 714, 1299
MaeI CTAG 2 cut(s) 206, 1166
MaeII ACGT 1 cut(s) 634
MaeIII GTNAC 1 cut(s) 1231
MalI GATC 3 cut(s) 450, 1064, 1131
MboI GATC 3 cut(s) 448, 1062, 1129
MboII GAAGA 9 cut(s) 92, 386, 392, 673, 839, 923, 939, 1206, 1272
MflI RGATCY 1 cut(s) 1129
MhlI GDGCHC 2 cut(s) 313, 324
MluCI AATT 7 cut(s) 112, 286, 396, 1250, 1263, 1333, 1375
MlyI GAGTC 3 cut(s) 137, 217, 430
MroXI GAANNNNTTC 2 cut(s) 399, 762
MseI TTAA 4 cut(s) 657, 815, 1248, 1283
MspA1I CMGCKG 2 cut(s) 1187, 1257
MspI CCGG 3 cut(s) 313, 574, 653
MspR9I CCNGG 6 cut(s) 313, 314, 770, 785, 908, 930
MvaI CCWGG 4 cut(s) 770, 785, 908, 930
MvnI CGCG 2 cut(s) 300, 1257
MwoI GCNNNNNNNGC 6 cut(s) 308, 536, 628, 637, 1039, 1275
NciI CCSGG 2 cut(s) 313, 314
NdeII GATC 3 cut(s) 448, 1062, 1129
NheI GCTAGC 1 cut(s) 205
NlaIII CATG 5 cut(s) 850, 896, 946, 1078, 1103
NlaIV GGNNCC 7 cut(s) 29, 50, 310, 1072, 1131, 1277, 1301
NmeAIII GCCGAG 3 cut(s) 4, 343, 1295
NspI RCATGY 1 cut(s) 1103
NspV TTCGAA 1 cut(s) 78
PaeI GCATGC 1 cut(s) 1103
PaeR7I CTCGAG 1 cut(s) 1136
PceI AGGCCT 1 cut(s) 22
PdmI GAANNNNTTC 2 cut(s) 399, 762
PfeI GAWTC 2 cut(s) 983, 1211
PfoI TCCNGGA 1 cut(s) 906
PinAI ACCGGT 1 cut(s) 652
PkrI GCNGC 4 cut(s) 94, 642, 1186, 1189
PleI GAGTC 3 cut(s) 137, 217, 429
PpsI GAGTC 3 cut(s) 137, 217, 429
PshBI ATTAAT 1 cut(s) 1283
PsiI TTATAA 1 cut(s) 479
Psp124BI GAGCTC 1 cut(s) 324
Psp6I CCWGG 4 cut(s) 768, 783, 906, 928
PspGI CCWGG 4 cut(s) 768, 783, 906, 928
PspN4I GGNNCC 7 cut(s) 29, 50, 310, 1072, 1131, 1277, 1301
PspPI GGNCC 5 cut(s) 27, 181, 315, 787, 1276
PspXI VCTCGAGB 1 cut(s) 1136
PstI CTGCAG 1 cut(s) 1192
PsuI RGATCY 1 cut(s) 1129
PvuII CAGCTG 1 cut(s) 1187
RsaI GTAC 4 cut(s) 510, 887, 1015, 1200
RsaNI GTAC 4 cut(s) 509, 886, 1014, 1199
SacI GAGCTC 1 cut(s) 324
SacII CCGCGG 1 cut(s) 1258
SalI GTCGAC 1 cut(s) 140
SaqAI TTAA 4 cut(s) 657, 815, 1248, 1283
SatI GCNGC 4 cut(s) 93, 641, 1185, 1188
Sau3AI GATC 3 cut(s) 448, 1062, 1129
Sau96I GGNCC 5 cut(s) 27, 181, 315, 787, 1276
SchI GAGTC 3 cut(s) 137, 217, 430
ScrFI CCNGG 6 cut(s) 313, 314, 770, 785, 908, 930
SduI GDGCHC 2 cut(s) 313, 324
SfaNI GCATC 2 cut(s) 714, 1299
SfcI CTRYAG 1 cut(s) 1188
SfiI GGCCNNNNNGGCC 1 cut(s) 1275
Sfr274I CTCGAG 1 cut(s) 1136
Sfr303I CCGCGG 1 cut(s) 1258
SfuI TTCGAA 1 cut(s) 78
SgrBI CCGCGG 1 cut(s) 1258
SinI GGWCC 2 cut(s) 181, 787
SlaI CTCGAG 1 cut(s) 1136
SmaI CCCGGG 1 cut(s) 314
SmlI CTYRAG 3 cut(s) 416, 1107, 1136
SmoI CTYRAG 3 cut(s) 416, 1107, 1136
SphI GCATGC 1 cut(s) 1103
SrfI GCCCGGGC 1 cut(s) 314
Sse9I AATT 7 cut(s) 112, 286, 396, 1250, 1263, 1333, 1375
SseBI AGGCCT 1 cut(s) 22
SspI AATATT 1 cut(s) 1287
SspMI CTAG 2 cut(s) 206, 1166
SstI GAGCTC 1 cut(s) 324
StuI AGGCCT 1 cut(s) 22
StyD4I CCNGG 6 cut(s) 311, 312, 768, 783, 906, 928
StyI CCWWGG 1 cut(s) 689
TaaI ACNGT 1 cut(s) 1004
TaiI ACGT 1 cut(s) 637
TaqI TCGA 8 cut(s) 33, 78, 141, 177, 447, 1137, 1323, 1360
TasI AATT 7 cut(s) 112, 286, 396, 1250, 1263, 1333, 1375
TatI WGTACW 2 cut(s) 508, 885
TauI GCSGC 1 cut(s) 95
TfiI GAWTC 2 cut(s) 983, 1211
Tru1I TTAA 4 cut(s) 657, 815, 1248, 1283
Tru9I TTAA 4 cut(s) 657, 815, 1248, 1283
TscAI CASTG 2 cut(s) 906, 1035
TseI GCWGC 3 cut(s) 640, 1184, 1187
TspDTI ATGAA 5 cut(s) 102, 896, 1091, 1109, 1326
TspGWI ACGGA 1 cut(s) 116
TspMI CCCGGG 1 cut(s) 312
TspRI CASTG 2 cut(s) 906, 1035
VpaK11BI GGWCC 2 cut(s) 181, 787
VspI ATTAAT 1 cut(s) 1283
XapI RAATTY 3 cut(s) 396, 1250, 1333
XceI RCATGY 1 cut(s) 1103
XcmI CCANNNNNNNNNTGG 1 cut(s) 802
XhoI CTCGAG 1 cut(s) 1136
XmaI CCCGGG 1 cut(s) 312
XmiI GTMKAC 1 cut(s) 141
XmnI GAANNNNTTC 2 cut(s) 399, 762
XspI CTAG 2 cut(s) 206, 1166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.