RchiOBHm_Chr4g0406871

acid phosphatase activity

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
28919283 .. 28921714
2432 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37815

Sequence Viewer

Length: 2283 bp
ATGAGCTCTGTTTCCTCTACTAGTTTTCAGGTATGTTTAAATGGTGAACTTTCAAATGAATTTAAGGCAAGCAGAGGCATTCGACAAGGCGATCCCTTGTCTCCATATCTCTTTGTCCTTTGTATGGAGAAGCTTTCTCACTTAATTAAATCTGCAGTGGAAGATGGTCTGTGGAAGCCTGTTAGAGCCTCTGGGTCTAGTCCTCTCATATCCCATTTATTTTTTGCCGATGATCTTATTCTTTTTGCTGAGGCGAGCTGTGACCAAGCTAGAATACTAAAGAGGTGCCTAGATTTGTTTTGTGATATTTCAGGGCAGGAGGTTAACTTCAGCAAGTCTGTCCTTTTCTGCTCCCCAAATACACGCAAGTCTCTTGCAAGAAATATTAGTCAAATTTGTGGTTCGGTGTTGACTACTAATCTTGGTAAATATCTAGGGGTGCCATTGATACACACTAAGATTACCAAGCAAACTTATGCAGCTGTGGTTGATAAAGTGCAAGGACGGCTTGCTGGTTGGAAGGGAAAGTTGTTGAACTTAGCTGGCAGGTTAACTCTTATTCAATCTGTCTCTGCTGCTATTCCAAATTATACTATGCAAACTGTGAGAATTCCTATGTCCATTTGTGACAGCCTTGATAAGTTGAATAGAGATTTTTTATGGGGGGATTATGATGGTAAGAAGAAAACTCACCTTGTCAGTTGGGAGTTAGTCTGTAGACCTAAAGAGTTTGGTGGCCTAGGAATTAAATGCACTAAGGATATGAATCAGGCTATGCTTGCTAAGATTGGGTGGAGAATGTTCCAAGGTGATAAGGGTCTGTGGAGCGATGTTCTCCATCATAAATATGTCAAGCAGGTTGACTTTCTCCATCCTCAGTATTCTTGCCCTACTAGGTGTTCTAGCACTTGGCGTGGGGTAATATTTGGCTCCAAATTATTGCATAAAGGTCTATCATGGAGAATTGGTGATGGGAGCTCAGTTAATTTCTGGACTGATACATGGTTTCATGGAAAACCCTTAACCCTTACTTTTGCTCCTTCTAGTATCCCTAATTTTCATGCTAAAGTAAAGGATTTCTGGAATGAGCATGGCTGGAACATGGATTTATTAAGATCGGTGCTGCCTGATGATCTGATTAGCCAAATTGTGAAGATCCCTGCTGGATATTCTGGTTGTGGTTCTGATAAGCTCATATGGGGTGCTACTTCAACTGGTAAGTTCTCAGTTAAATCTGCATACCTTACTTTACTTCAAGATGAGAATTATACTCCCTTTAATTGGGCTTTTATTTGGAAGATGGCTATTCCTCCCAAGCTGAAATCTTTTTTCTGGCTTATATGTCATGGAAAATTGTTAACGAATGTGGAAAGAGTCAAGAGAAGAATGTCCTCTGACCCTTCTTGCCCTCTTTGCCATAACGCTCCTGAAACTATTATGCACTTGTTAAGAGATTGTTCTCATGCCTCCTCTATATGGAATAAGATCATTTGTTTGGATACCATTACTAGAGCTATGCATCTGGATTGGATGAGCTGGTTGGCAGCAAATATTCGATGCCAGAGAACTTGTTATGGAGAGTTAAATTGGTGTGTTGTCTTTGTTTTTGCTTGCTGGTACATCTGGAAGTGGAGGAATAAGATTATTTTCGATGAGGAGTTTCATTATCCAATTAATCCCAGCAATCTGATCATTGACGCTACTAAGGAGTGGAGCTCAACTACCTCAAAGAATTTATTTCTTGGCCAAAAGGCTACTATTATGCTGCATTGGACCATGCCTCCTCTGAATTGGTGCAAGCTGAATATTGATGGCGCAAGAGAGCGGAGTGGAAAGATTGGTGCTGGTGGGGTTCTCAGGGATTCTTCTGGATCTTGGATTTCTGGGTTCACTGCTAATTTAGGTTGTGGCAGTGTTATTCAAGCTGAGGCCTGGGGTTTGTTATTGGGGCTTAGAATGTCTGTCACTGCTCATTGCCAAAATATCATTATTGAAAGTGACTCTGATATCCTTGTCACTTTAGTGAATCAAGAAGTGGATGAGCTGCATCCTTTGAAATCCATTATAAATAGCTGCCAGTACTTGATGCAGAAGTTTGTGAGCTGTGAAGTGAAGCATGTTTTCCGGGAAATTAACATGGTTGCTGACATGCTATCCAAGTGTAGCCTTACTGAGGATTTGGGTGTGCATTTCATGGAGCAACCTCCTCCGCAAGTTATCAATCTCCTTCTTGACGACTTGTGTGAAAGTCCAAAGTTTAGGACCGTAGTCTCTCATATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

760

Amino Acids

85.81

Weight (kDa)

8.8

Isoelectric Point (pI)

38.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_1 PF00078 13 - 148 8.9e-13 Reverse transcriptase (RNA-dependent DNA polymerase)
zf-RVT PF13966 408 - 493 2.4e-21 zinc-binding in reverse transcriptase
RVT_3 PF13456 602 - 720 1.5e-24 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01050
fragaria_vesca FvH4_1g24181 FvH4_1g28741 FvH4_1g29781 FvH4_2g00621 FvH4_2g04885 FvH4_2g11953 FvH4_2g11954 FvH4_2g12001 FvH4_2g12002 FvH4_2g12222 FvH4_2g12223 FvH4_2g38351 FvH4_3g04401 FvH4_3g31330 FvH4_3g33091 FvH4_4g11461 FvH4_5g27993 FvH4_5g27994 FvH4_5g28072 FvH4_5g28231 FvH4_5g28591 FvH4_5g34261 FvH4_6g18162 FvH4_6g25500 FvH4_6g25561 FvH4_6g25792 FvH4_6g27602 FvH4_6g46881
malus_domestica MD03G1019700.v1.1
prunus_persica Prupe.1G055400_v2.0.a1 Prupe.1G179200_v2.0.a1 Prupe.1G208200_v2.0.a1 Prupe.1G231200_v2.0.a1 Prupe.2G044900_v2.0.a1 Prupe.2G055100_v2.0.a1 Prupe.2G097600_v2.0.a1 Prupe.2G114200_v2.0.a1 Prupe.3G109000_v2.0.a1 Prupe.3G109300_v2.0.a1 Prupe.3G109600_v2.0.a1 Prupe.4G246900_v2.0.a1 Prupe.5G026400_v2.0.a1
pyrus_communis pycom05g17130 pycom07g06820 pycom07g18590 pycom07g22730 pycom12401g00120 pycom12401g00180 pycom420g00470
rosa_chinensis RchiOBHm_Chr1g0342591 RchiOBHm_Chr1g0342601 RchiOBHm_Chr1g0342611 RchiOBHm_Chr1g0351011 RchiOBHm_Chr2g0146151 RchiOBHm_Chr2g0171821 RchiOBHm_Chr3g0492921 RchiOBHm_Chr3g0492931 RchiOBHm_Chr4g0406871 RchiOBHm_Chr4g0426311 RchiOBHm_Chr5g0020721 RchiOBHm_Chr5g0050111 RchiOBHm_Chr5g0051681 RchiOBHm_Chr5g0053531 RchiOBHm_Chr5g0054841 RchiOBHm_Chr5g0055061 RchiOBHm_Chr5g0055071 RchiOBHm_Chr6g0248911 RchiOBHm_Chr6g0291741 RchiOBHm_Chr7g0187781 RchiOBHm_Chr7g0220081 RchiOBHm_Chr7g0224391 RchiOBHm_Chr7g0235221
rosa_laevigata RLG00000002133 RLG00000002402 RLG00000002736 RLG00000011046 RLG00000013214 RLG00000016550 RLG00000021669 RLG00000022948 RLG00000023691 RLG00000024682 RLG00000027826 RLG00000029734 RLG00000029831 RLG00000030305 RLG00000037042
rosa_multiflora Rmu_co7992532.1_g000001 Rmu_co8021462.1_g000001 Rmu_co8229237.1_g000001 Rmu_co8281571.1_g000001 Rmu_co8326451.1_g000001 Rmu_co8359553.1_g000001 Rmu_co8372117.1_g000001 Rmu_co8427177.1_g000001 Rmu_co8474063.1_g000002 Rmu_sc0000007.1_g000020 Rmu_sc0000173.1_g000002 Rmu_sc0000367.1_g000086 Rmu_sc0000367.1_g000088 Rmu_sc0000559.1_g000002 Rmu_sc0000733.1_g000014 Rmu_sc0000745.1_g000006 Rmu_sc0000791.1_g000046 Rmu_sc0000791.1_g000049 Rmu_sc0000824.1_g000010 Rmu_sc0000824.1_g000011 Rmu_sc0000834.1_g000009 Rmu_sc0000834.1_g000011 Rmu_sc0000911.1_g000020 Rmu_sc0000935.1_g000034 Rmu_sc0000935.1_g000051 Rmu_sc0000935.1_g000053 Rmu_sc0001000.1_g000005 Rmu_sc0001000.1_g000006 Rmu_sc0001150.1_g000004 Rmu_sc0001227.1_g000002 Rmu_sc0001322.1_g000018 Rmu_sc0001343.1_g000001 Rmu_sc0001356.1_g000004 Rmu_sc0001356.1_g000005 Rmu_sc0001363.1_g000007 Rmu_sc0001463.1_g000012 Rmu_sc0001484.1_g000023 Rmu_sc0001516.1_g000003 Rmu_sc0001516.1_g000005 Rmu_sc0001619.1_g000005 Rmu_sc0001648.1_g000032 Rmu_sc0001648.1_g000035 Rmu_sc0001694.1_g000008 Rmu_sc0001809.1_g000023 Rmu_sc0002093.1_g000027 Rmu_sc0002231.1_g000004 Rmu_sc0002245.1_g000001 Rmu_sc0002245.1_g000003 Rmu_sc0002354.1_g000045 Rmu_sc0002354.1_g000048 Rmu_sc0002368.1_g000014 Rmu_sc0002368.1_g000016 Rmu_sc0002368.1_g000017 Rmu_sc0002401.1_g000030 Rmu_sc0002487.1_g000012 Rmu_sc0002798.1_g000028 Rmu_sc0002923.1_g000012 Rmu_sc0002960.1_g000002 Rmu_sc0003033.1_g000072 Rmu_sc0003133.1_g000015 Rmu_sc0003168.1_g000007 Rmu_sc0003945.1_g000002 Rmu_sc0003945.1_g000004 Rmu_sc0003945.1_g000005 Rmu_sc0003979.1_g000004 Rmu_sc0004005.1_g000007 Rmu_sc0004059.1_g000018 Rmu_sc0004064.1_g000001 Rmu_sc0004083.1_g000007 Rmu_sc0004083.1_g000008 Rmu_sc0004354.1_g000033 Rmu_sc0004368.1_g000035 Rmu_sc0004483.1_g000032 Rmu_sc0004646.1_g000012 Rmu_sc0005014.1_g000006 Rmu_sc0005016.1_g000046 Rmu_sc0005016.1_g000051 Rmu_sc0005033.1_g000005 Rmu_sc0005033.1_g000007 Rmu_sc0005065.1_g000002 Rmu_sc0005065.1_g000004 Rmu_sc0005168.1_g000012 Rmu_sc0005238.1_g000001 Rmu_sc0005365.1_g000012 Rmu_sc0005631.1_g000005 Rmu_sc0005704.1_g000013 Rmu_sc0005704.1_g000014 Rmu_sc0005781.1_g000030 Rmu_sc0005789.1_g000016 Rmu_sc0006185.1_g000001 Rmu_sc0006185.1_g000002 Rmu_sc0006266.1_g000044 Rmu_sc0006561.1_g000018 Rmu_sc0006695.1_g000016 Rmu_sc0007739.1_g000022 Rmu_sc0008050.1_g000013 Rmu_sc0008169.1_g000006 Rmu_sc0008855.1_g000006 Rmu_sc0009298.1_g000002 Rmu_sc0009495.1_g000005 Rmu_sc0010608.1_g000003 Rmu_sc0010958.1_g000005 Rmu_sc0011506.1_g000001 Rmu_sc0011790.1_g000002 Rmu_sc0011790.1_g000003 Rmu_sc0012042.1_g000004 Rmu_sc0012042.1_g000005 Rmu_sc0012140.1_g000020 Rmu_sc0012726.1_g000005 Rmu_sc0012746.1_g000023 Rmu_sc0013193.1_g000002 Rmu_sc0013193.1_g000003 Rmu_sc0017997.1_g000001 Rmu_sc0021401.1_g000001 Rmu_sc0025959.1_g000001 Rmu_sc0026403.1_g000003 Rmu_sc0028616.1_g000002 Rmu_sc0029801.1_g000002 Rmu_sc0032453.1_g000001 Rmu_sc0033672.1_g000002 Rmu_sc0034553.1_g000001 Rmu_sc0036883.1_g000001 Rmu_ssc0000096.1_g000001 Rmu_ssc0000158.1_g000031 Rmu_ssc0000291.1_g000034 Rmu_ssc0000381.1_g000026 Rmu_ssc0000387.1_g000010 Rmu_ssc0000474.1_g000002 Rmu_ssc0000474.1_g000004
rosa_roxburghii Rroxscaffold_1G00020090 Rroxscaffold_1G00020100 Rroxscaffold_1G00022940 Rroxscaffold_1G00044600 Rroxscaffold_1G00054420 Rroxscaffold_1G00054430 Rroxscaffold_1G00056440 Rroxscaffold_2G00090180 Rroxscaffold_2G00101250 Rroxscaffold_2G00110600 Rroxscaffold_2G00152800 Rroxscaffold_4G00320370 Rroxscaffold_4G00320640 Rroxscaffold_4G00322420 Rroxscaffold_4G00324670 Rroxscaffold_5G00332760 Rroxscaffold_5G00345010 Rroxscaffold_5G00345020 Rroxscaffold_5G00355470 Rroxscaffold_5G00385520 Rroxscaffold_6G00394610 Rroxscaffold_6G00394700 Rroxscaffold_7G00164190 Rroxscaffold_7G00182750 Rroxscaffold_7G00183540 Rroxscaffold_7G00203520 Rroxscaffold_7G00211630
rosa_rugosa Rorug01G0041400 Rorug01G0041500 Rorug01G0065300 Rorug01G0065300 Rorug01G0069700 Rorug01G0069800 Rorug01G0070300 Rorug01G0072300 Rorug01G0072900 Rorug01G0093100 Rorug01G0147100.1 Rorug01G0196900 Rorug01G0259700 Rorug02G0162000 Rorug02G0182700 Rorug02G0212300 Rorug02G0214700 Rorug02G0229900 Rorug02G0246100 Rorug02G0257400 Rorug02G0259100 Rorug02G0341400 Rorug02G0341500 Rorug02G0341700 Rorug02G0341800 Rorug02G0355600 Rorug02G0386100 Rorug02G0386100 Rorug02G0387000 Rorug02G0387100 Rorug02G0388400 Rorug02G0388500 Rorug02G0429100 Rorug02G0429100 Rorug02G0455300 Rorug02G0634400 Rorug03G0163200 Rorug03G0198500 Rorug03G0199600 Rorug03G0204000 Rorug03G0265600 Rorug03G0266100 Rorug03G0266200 Rorug03G0280600 Rorug03G0348200 Rorug03G0349700 Rorug03G0349800 Rorug04G0020200 Rorug04G0073700 Rorug04G0215000 Rorug04G0426100 Rorug05G0064200 Rorug05G0064300 Rorug05G0265700 Rorug05G0287400 Rorug05G0287500 Rorug05G0287500 Rorug05G0405000 Rorug05G0525700 Rorug05G0525800 Rorug05G0588200 Rorug06G0038200 Rorug06G0057900 Rorug06G0058000 Rorug06G0058500 Rorug06G0058600 Rorug06G0116700 Rorug06G0159300.1 Rorug06G0159400 Rorug06G0174700 Rorug06G0375500 Rorug07G0091400 Rorug07G0094900 Rorug07G0108100 Rorug07G0140700 Rorug07G0140700 Rorug07G0207100 Rorug07G0207100 Rorug07G0207200 Rorug07G0287300
rosa_samantha Rh1AG100100 Rh1AG104500 Rh1BG150700 Rh1BG237700 Rh1BG334000 Rh1CG090000 Rh1CG100100 Rh1CG347300 Rh1DG090500 Rh1DG096100 Rh1DG107400 Rh1DG182500 Rh1DG265700 Rh1DG365200 Rh2BG256800 Rh2BG361300 Rh2BG468600 Rh2BG549800 Rh2CG270900 Rh2DG276700 Rh2DG276800 Rh2DG377700 Rh2DG477900 Rh3AG161200 Rh3BG138800 Rh3BG185700 Rh3BG269600 Rh3CG176000 Rh4AG006100 Rh4AG216700 Rh4AG355800 Rh4CG108600 Rh5AG141700 Rh5AG480000 Rh5BG014500 Rh5BG134600 Rh5BG295400 Rh5BG552900 Rh5CG058600 Rh5CG286400 Rh5CG350900 Rh5CG575800 Rh5DG004300 Rh5DG254600 Rh5DG356500 Rh6AG106500 Rh6AG191100 Rh6AG224700 Rh6BG074700 Rh6BG181400 Rh6BG352200 Rh6BG408400 Rh6BG453600 Rh6CG047400 Rh6CG172200 Rh6CG189400 Rh6CG515800 Rh6DG042900 Rh6DG163400 Rh7AG089300 Rh7AG227400 Rh7AG275600 Rh7AG375100 Rh7AG460900 Rh7AG485200 Rh7BG146100 Rh7BG354300 Rh7CG077100 Rh7CG294500 Rh7CG393800 Rh7DG041700 Rh7DG062700 Rh7DG091700 Rh7DG178900 Rh7DG192300 Rh7DG297000 Rh7DG403600 Rh7DG411800
rosa_wichuraiana Rw0G007100 Rw0G011430 Rw1G003580 Rw1G004040 Rw1G005880 Rw1G009860 Rw1G009990 Rw1G012190 Rw1G012200 Rw1G013740 Rw1G013750 Rw1G016710 Rw1G021050 Rw2G023790 Rw2G028810 Rw2G035890 Rw2G036250 Rw4G008880 Rw4G014380 Rw4G014390 Rw4G016020 Rw4G037160 Rw5G010060 Rw5G030620 Rw5G033840 Rw5G049840 Rw5G049850 Rw6G003450 Rw6G015080 Rw7G019640 Rw7G024060 Rw7G024070 Rw7G029090 Rw7G037010 Rw7G039170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2066
Acc36I ACCTGC 2 cut(s) 537, 847
AccB1I GGYRCC 2 cut(s) 285, 439
AccBSI CCGCTC 1 cut(s) 1825
AccI GTMKAC 1 cut(s) 718
AciI CCGC 2 cut(s) 1825, 2210
AclWI GGATC 3 cut(s) 86, 1150, 1879
AcoI YGGCCR 1 cut(s) 1744
AcsI RAATTY 4 cut(s) 59, 393, 609, 1732
AcuI CTGAAG 1 cut(s) 313
AfaI GTAC 2 cut(s) 1619, 2081
AfiI CCNNNNNNNGG 4 cut(s) 124, 1281, 1476, 2173
AgsI TTSAA 9 cut(s) 54, 535, 563, 646, 1212, 1256, 1922, 1994, 2056
AhlI ACTAGT 1 cut(s) 20
AjnI CCWGG 1 cut(s) 1931
AleI CACNNNNGTG 1 cut(s) 2021
Alw21I GWGCWC 3 cut(s) 8, 980, 1718
Alw26I GTCTC 4 cut(s) 105, 375, 574, 2275
AlwI GGATC 3 cut(s) 86, 1150, 1879
AoxI GGCC 3 cut(s) 736, 1744, 1929
ApeKI GCWGC 7 cut(s) 479, 575, 1123, 1544, 1765, 2044, 2073
ApoI RAATTY 4 cut(s) 59, 393, 609, 1732
AseI ATTAAT 1 cut(s) 1674
AspA2I CCTAGG 1 cut(s) 739
AspLEI GCGC 1 cut(s) 1817
AspS9I GGNCC 2 cut(s) 1773, 2262
AsuC2I CCSGG 1 cut(s) 2126
AsuHPI GGTGA 4 cut(s) 56, 683, 821, 980
AvaII GGWCC 2 cut(s) 1773, 2262
AvrII CCTAGG 1 cut(s) 739
BalI TGGCCA 1 cut(s) 1746
BanI GGYRCC 2 cut(s) 285, 439
BanII GRGCYC 3 cut(s) 8, 980, 1718
Bbv12I GWGCWC 3 cut(s) 8, 980, 1718
BbvCI CCTCAGC 2 cut(s) 249, 1926
BbvI GCAGC 7 cut(s) 491, 562, 1110, 1556, 1752, 2031, 2060
BccI CCATC 7 cut(s) 158, 668, 846, 879, 965, 1294, 1805
BceAI ACGGC 1 cut(s) 521
BciT130I CCWGG 1 cut(s) 1933
BciVI GTATCC 2 cut(s) 1058, 1492
BclI TGATCA 1 cut(s) 1689
BcnI CCSGG 1 cut(s) 2126
BcoDI GTCTC 4 cut(s) 105, 375, 574, 2275
BcuI ACTAGT 1 cut(s) 20
BfmI CTRYAG 2 cut(s) 153, 715
BfuAI ACCTGC 2 cut(s) 537, 847
BfuI GTATCC 2 cut(s) 1058, 1492
BisI GCNGC 7 cut(s) 480, 576, 1124, 1545, 1766, 2045, 2074
BlnI CCTAGG 1 cut(s) 739
BlsI GCNGC 7 cut(s) 481, 577, 1125, 1546, 1767, 2046, 2075
BmcAI AGTACT 1 cut(s) 2081
Bme1390I CCNGG 2 cut(s) 1933, 2126
Bme18I GGWCC 2 cut(s) 1773, 2262
BmgT120I GGNCC 2 cut(s) 1773, 2262
BmiI GGNNCC 3 cut(s) 287, 441, 931
BmrFI CCNGG 2 cut(s) 1933, 2126
BmsI GCATC 4 cut(s) 1528, 1547, 2056, 2076
BoxI GACNNNNGTC 1 cut(s) 2267
BplI GAGNNNNNCTC 2 cut(s) 1700, 1732
Bpu10I CCTNAGC 2 cut(s) 249, 1926
BpuMI CCSGG 1 cut(s) 2126
BsaBI GATNNNNATC 1 cut(s) 765
BsaJI CCNNGG 3 cut(s) 739, 805, 1932
BsaXI ACNNNNNCTCC 6 cut(s) 952, 982, 1021, 1051, 1765, 1795
Bsc4I CCNNNNNNNGG 4 cut(s) 124, 1281, 1476, 2173
Bse1I ACTGG 2 cut(s) 1219, 2077
Bse3DI GCAATG 1 cut(s) 1972
Bse8I GATNNNNATC 1 cut(s) 765
BseBI CCWGG 1 cut(s) 1933
BseDI CCNNGG 3 cut(s) 739, 805, 1932
BseGI GGATG 4 cut(s) 871, 1536, 2044, 2047
BseJI GATNNNNATC 1 cut(s) 765
BseLI CCNNNNNNNGG 4 cut(s) 124, 1281, 1476, 2173
BseMI GCAATG 1 cut(s) 1972
BseMII CTCAG 7 cut(s) 240, 890, 993, 1239, 1870, 1917, 2163
BseNI ACTGG 2 cut(s) 1219, 2077
BseRI GAGGAG 4 cut(s) 1459, 1670, 1773, 2196
BseXI GCAGC 7 cut(s) 491, 562, 1110, 1556, 1752, 2031, 2060
BseYI CCCAGC 1 cut(s) 1679
BshFI GGCC 3 cut(s) 738, 1746, 1931
BshNI GGYRCC 2 cut(s) 285, 439
BsiHKAI GWGCWC 3 cut(s) 8, 980, 1718
BsiSI CCGG 1 cut(s) 2125
BslI CCNNNNNNNGG 4 cut(s) 124, 1281, 1476, 2173
BsmAI GTCTC 4 cut(s) 105, 375, 574, 2275
BsmI GAATGC 1 cut(s) 78
BsnI GGCC 3 cut(s) 738, 1746, 1931
Bsp1286I GDGCHC 3 cut(s) 8, 980, 1718
Bsp143I GATC 8 cut(s) 91, 232, 1115, 1132, 1155, 1485, 1689, 1871
BspACI CCGC 2 cut(s) 1825, 2210
BspANI GGCC 3 cut(s) 738, 1746, 1931
BspCNI CTCAG 7 cut(s) 241, 889, 992, 1238, 1869, 1918, 2164
BspLI GGNNCC 3 cut(s) 287, 441, 931
BspMAI CTGCAG 1 cut(s) 157
BspMI ACCTGC 2 cut(s) 537, 847
BspPI GGATC 3 cut(s) 86, 1150, 1879
BspT107I GGYRCC 2 cut(s) 285, 439
BsrBI CCGCTC 1 cut(s) 1825
BsrDI GCAATG 1 cut(s) 1972
BsrI ACTGG 2 cut(s) 1219, 2077
BssECI CCNNGG 3 cut(s) 739, 805, 1932
BssMI GATC 8 cut(s) 91, 232, 1115, 1132, 1155, 1485, 1689, 1871
BssT1I CCWWGG 2 cut(s) 739, 805
Bst2UI CCWGG 1 cut(s) 1933
Bst4CI ACNGT 2 cut(s) 604, 2266
BstC8I GCNNGC 7 cut(s) 70, 256, 510, 544, 780, 1612, 1799
BstENI CCTNNNNNAGG 1 cut(s) 2171
BstF5I GGATG 4 cut(s) 871, 1536, 2044, 2047
BstHHI GCGC 1 cut(s) 1817
BstKTI GATC 8 cut(s) 94, 235, 1118, 1135, 1158, 1488, 1692, 1874
BstMAI GTCTC 4 cut(s) 105, 375, 574, 2275
BstMBI GATC 8 cut(s) 91, 232, 1115, 1132, 1155, 1485, 1689, 1871
BstMWI GCNNNNNNNGC 3 cut(s) 505, 779, 1413
BstNI CCWGG 1 cut(s) 1933
BstNSI RCATGY 2 cut(s) 2120, 2152
BstPAI GACNNNNGTC 1 cut(s) 2267
BstSCI CCNGG 2 cut(s) 1931, 2124
BstSFI CTRYAG 2 cut(s) 153, 715
BstV1I GCAGC 7 cut(s) 491, 562, 1110, 1556, 1752, 2031, 2060
BstX2I RGATCY 2 cut(s) 1155, 1871
BstYI RGATCY 2 cut(s) 1155, 1871
BsuI GTATCC 2 cut(s) 1058, 1492
BsuRI GGCC 3 cut(s) 738, 1746, 1931
BtgZI GCGATG 1 cut(s) 843
BtsCI GGATG 4 cut(s) 871, 1536, 2044, 2047
BtsI GCAGTG 4 cut(s) 162, 1890, 1918, 1965
BtsIMutI CAGTG 4 cut(s) 162, 1890, 1918, 1965
BveI ACCTGC 2 cut(s) 537, 847
Cac8I GCNNGC 7 cut(s) 70, 256, 510, 544, 780, 1612, 1799
CfoI GCGC 1 cut(s) 1817
Cfr13I GGNCC 2 cut(s) 1773, 2262
CseI GACGC 1 cut(s) 1706
Csp6I GTAC 2 cut(s) 1618, 2080
CviQI GTAC 2 cut(s) 1618, 2080
DpnI GATC 8 cut(s) 93, 234, 1117, 1134, 1157, 1487, 1691, 1873
DpnII GATC 8 cut(s) 91, 232, 1115, 1132, 1155, 1485, 1689, 1871
DraI TTTAAA 1 cut(s) 39
EaeI YGGCCR 1 cut(s) 1744
Ecl136II GAGCTC 3 cut(s) 6, 978, 1716
Eco130I CCWWGG 2 cut(s) 739, 805
Eco147I AGGCCT 1 cut(s) 1931
Eco24I GRGCYC 3 cut(s) 8, 980, 1718
Eco32I GATATC 1 cut(s) 2008
Eco47I GGWCC 2 cut(s) 1773, 2262
Eco53kI GAGCTC 3 cut(s) 6, 978, 1716
Eco57I CTGAAG 1 cut(s) 313
EcoICRI GAGCTC 3 cut(s) 6, 978, 1716
EcoNI CCTNNNNNAGG 1 cut(s) 2171
EcoRI GAATTC 1 cut(s) 609
EcoRII CCWGG 1 cut(s) 1931
EcoRV GATATC 1 cut(s) 2008
EcoT14I CCWWGG 2 cut(s) 739, 805
EcoT22I ATGCAT 1 cut(s) 1521
EcoT38I GRGCYC 3 cut(s) 8, 980, 1718
ErhI CCWWGG 2 cut(s) 739, 805
FalI AAGNNNNNCTT 2 cut(s) 492, 524
FauNDI CATATG 2 cut(s) 1196, 2277
FbaI TGATCA 1 cut(s) 1689
FblI GTMKAC 1 cut(s) 718
Fnu4HI GCNGC 7 cut(s) 480, 576, 1124, 1545, 1766, 2045, 2074
FokI GGATG 4 cut(s) 858, 1543, 2034, 2051
FriOI GRGCYC 3 cut(s) 8, 980, 1718
Fsp4HI GCNGC 7 cut(s) 480, 576, 1124, 1545, 1766, 2045, 2074
GlaI GCGC 1 cut(s) 1816
GluI GCNGC 7 cut(s) 480, 576, 1124, 1545, 1766, 2045, 2074
GsaI CCCAGC 1 cut(s) 1683
HaeIII GGCC 3 cut(s) 738, 1746, 1931
HapII CCGG 1 cut(s) 2125
HgaI GACGC 1 cut(s) 1706
HhaI GCGC 1 cut(s) 1817
Hin6I GCGC 1 cut(s) 1815
HinP1I GCGC 1 cut(s) 1815
HincII GTYRAC 5 cut(s) 325, 411, 552, 862, 1359
HindII GTYRAC 5 cut(s) 325, 411, 552, 862, 1359
HindIII AAGCTT 1 cut(s) 131
HinfI GANTC 5 cut(s) 766, 1374, 1862, 2000, 2026
HpaI GTTAAC 3 cut(s) 325, 552, 1359
HpaII CCGG 1 cut(s) 2125
HphI GGTGA 4 cut(s) 56, 683, 821, 980
Hpy166II GTNNAC 8 cut(s) 47, 325, 411, 552, 719, 862, 1359, 1890
Hpy188I TCNGA 6 cut(s) 1137, 1186, 1396, 1689, 1788, 2005
Hpy8I GTNNAC 8 cut(s) 47, 325, 411, 552, 719, 862, 1359, 1890
HpyAV CCTTC 4 cut(s) 514, 1050, 1410, 2237
HpyCH4III ACNGT 2 cut(s) 604, 2266
HpyF10VI GCNNNNNNNGC 3 cut(s) 505, 779, 1413
HspAI GCGC 1 cut(s) 1815
Ksp22I TGATCA 1 cut(s) 1689
KspAI GTTAAC 3 cut(s) 325, 552, 1359
Kzo9I GATC 8 cut(s) 91, 232, 1115, 1132, 1155, 1485, 1689, 1871
LmnI GCTCC 8 cut(s) 356, 825, 935, 975, 1042, 1429, 1713, 2197
Lsp1109I GCAGC 7 cut(s) 491, 562, 1110, 1556, 1752, 2031, 2060
LweI GCATC 4 cut(s) 1528, 1547, 2056, 2076
MaeIII GTNAC 5 cut(s) 260, 626, 1963, 1997, 2014
MalI GATC 8 cut(s) 93, 234, 1117, 1134, 1157, 1487, 1691, 1873
MbiI CCGCTC 1 cut(s) 1825
MboI GATC 8 cut(s) 91, 232, 1115, 1132, 1155, 1485, 1689, 1871
MboII GAAGA 6 cut(s) 173, 694, 1165, 1309, 1395, 1857
MflI RGATCY 2 cut(s) 1155, 1871
MhlI GDGCHC 3 cut(s) 8, 980, 1718
MlsI TGGCCA 1 cut(s) 1746
MluNI TGGCCA 1 cut(s) 1746
MlyI GAGTC 2 cut(s) 1383, 1994
MmeI TCCRAC 1 cut(s) 497
Mox20I TGGCCA 1 cut(s) 1746
Mph1103I ATGCAT 1 cut(s) 1521
MscI TGGCCA 1 cut(s) 1746
MslI CAYNNNNRTG 2 cut(s) 846, 2021
Msp20I TGGCCA 1 cut(s) 1746
MspA1I CMGCKG 1 cut(s) 482
MspI CCGG 1 cut(s) 2125
MspR9I CCNGG 2 cut(s) 1933, 2126
Mva1269I GAATGC 1 cut(s) 78
MvaI CCWGG 1 cut(s) 1933
MwoI GCNNNNNNNGC 3 cut(s) 505, 779, 1413
NciI CCSGG 1 cut(s) 2126
NdeI CATATG 2 cut(s) 1196, 2277
NdeII GATC 8 cut(s) 91, 232, 1115, 1132, 1155, 1485, 1689, 1871
NlaIV GGNNCC 3 cut(s) 287, 441, 931
NmuCI GTSAC 5 cut(s) 260, 626, 1963, 1997, 2014
NsiI ATGCAT 1 cut(s) 1521
NspI RCATGY 2 cut(s) 2120, 2152
OliI CACNNNNGTG 1 cut(s) 2021
PacI TTAATTAA 1 cut(s) 147
PceI AGGCCT 1 cut(s) 1931
PctI GAATGC 1 cut(s) 78
PfeI GAWTC 3 cut(s) 766, 1862, 2026
PfoI TCCNGGA 1 cut(s) 2124
PkrI GCNGC 7 cut(s) 481, 577, 1125, 1546, 1767, 2046, 2075
PleI GAGTC 2 cut(s) 1382, 1994
PpsI GAGTC 2 cut(s) 1382, 1994
PshAI GACNNNNGTC 1 cut(s) 2267
PshBI ATTAAT 1 cut(s) 1674
PsiI TTATAA 1 cut(s) 2066
Psp124BI GAGCTC 3 cut(s) 8, 980, 1718
Psp6I CCWGG 1 cut(s) 1931
PspFI CCCAGC 1 cut(s) 1679
PspGI CCWGG 1 cut(s) 1931
PspN4I GGNNCC 3 cut(s) 287, 441, 931
PspPI GGNCC 2 cut(s) 1773, 2262
PstI CTGCAG 1 cut(s) 157
PsuI RGATCY 2 cut(s) 1155, 1871
PvuII CAGCTG 1 cut(s) 482
RsaI GTAC 2 cut(s) 1619, 2081
RsaNI GTAC 2 cut(s) 1618, 2080
RseI CAYNNNNRTG 2 cut(s) 846, 2021
SacI GAGCTC 3 cut(s) 8, 980, 1718
SatI GCNGC 7 cut(s) 480, 576, 1124, 1545, 1766, 2045, 2074
Sau3AI GATC 8 cut(s) 91, 232, 1115, 1132, 1155, 1485, 1689, 1871
Sau96I GGNCC 2 cut(s) 1773, 2262
ScaI AGTACT 1 cut(s) 2081
SchI GAGTC 2 cut(s) 1383, 1994
ScrFI CCNGG 2 cut(s) 1933, 2126
SduI GDGCHC 3 cut(s) 8, 980, 1718
SfaNI GCATC 4 cut(s) 1528, 1547, 2056, 2076
SfcI CTRYAG 2 cut(s) 153, 715
SinI GGWCC 2 cut(s) 1773, 2262
SmiMI CAYNNNNRTG 2 cut(s) 846, 2021
SpeI ACTAGT 1 cut(s) 20
SseBI AGGCCT 1 cut(s) 1931
SsiI CCGC 2 cut(s) 1825, 2210
SspI AATATT 4 cut(s) 385, 924, 1552, 1807
SstI GAGCTC 3 cut(s) 8, 980, 1718
StuI AGGCCT 1 cut(s) 1931
StyD4I CCNGG 2 cut(s) 1931, 2124
StyI CCWWGG 2 cut(s) 739, 805
TaaI ACNGT 2 cut(s) 604, 2266
TaqI TCGA 3 cut(s) 82, 1555, 1650
TatI WGTACW 1 cut(s) 2079
TfiI GAWTC 3 cut(s) 766, 1862, 2026
TscAI CASTG 4 cut(s) 162, 1897, 1918, 1972
TseFI GTSAC 5 cut(s) 260, 626, 1963, 1997, 2014
TseI GCWGC 7 cut(s) 479, 575, 1123, 1544, 1765, 2044, 2073
Tsp45I GTSAC 5 cut(s) 260, 626, 1963, 1997, 2014
TspDTI ATGAA 6 cut(s) 72, 779, 998, 1049, 1652, 2182
TspRI CASTG 4 cut(s) 162, 1897, 1918, 1972
VpaK11BI GGWCC 2 cut(s) 1773, 2262
VspI ATTAAT 1 cut(s) 1674
XagI CCTNNNNNAGG 1 cut(s) 2171
XapI RAATTY 4 cut(s) 59, 393, 609, 1732
XceI RCATGY 2 cut(s) 2120, 2152
XmaJI CCTAGG 1 cut(s) 739
XmiI GTMKAC 1 cut(s) 718
ZrmI AGTACT 1 cut(s) 2081
Zsp2I ATGCAT 1 cut(s) 1521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.