Ribonuclease H
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 67 |
| AcsI | RAATTY | 2 cut(s) | 29, 91 |
| AfaI | GTAC | 3 cut(s) | 228, 310, 337 |
| AgsI | TTSAA | 2 cut(s) | 62, 413 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 205, 237 |
| AluBI | AGCT | 3 cut(s) | 99, 104, 233 |
| AluI | AGCT | 3 cut(s) | 99, 104, 233 |
| Alw26I | GTCTC | 1 cut(s) | 395 |
| ApeKI | GCWGC | 2 cut(s) | 137, 257 |
| ApoI | RAATTY | 2 cut(s) | 29, 91 |
| AxyI | CCTNAGG | 1 cut(s) | 243 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 408, 441 |
| BbvI | GCAGC | 2 cut(s) | 124, 244 |
| BciVI | GTATCC | 1 cut(s) | 436 |
| BclI | TGATCA | 1 cut(s) | 451 |
| BcoDI | GTCTC | 1 cut(s) | 395 |
| BfaI | CTAG | 2 cut(s) | 168, 342 |
| BfuI | GTATCC | 1 cut(s) | 436 |
| BisI | GCNGC | 2 cut(s) | 138, 258 |
| BlpI | GCTNAGC | 1 cut(s) | 100 |
| BlsI | GCNGC | 2 cut(s) | 139, 259 |
| BmsI | GCATC | 1 cut(s) | 269 |
| BpmI | CTGGAG | 1 cut(s) | 348 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 100 |
| Bse1I | ACTGG | 1 cut(s) | 42 |
| Bse21I | CCTNAGG | 1 cut(s) | 243 |
| Bse3DI | GCAATG | 1 cut(s) | 352 |
| BseGI | GGATG | 1 cut(s) | 238 |
| BseMI | GCAATG | 1 cut(s) | 352 |
| BseMII | CTCAG | 2 cut(s) | 257, 273 |
| BseNI | ACTGG | 1 cut(s) | 42 |
| BseXI | GCAGC | 2 cut(s) | 124, 244 |
| BsmAI | GTCTC | 1 cut(s) | 395 |
| Bsp143I | GATC | 1 cut(s) | 451 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 100 |
| BspCNI | CTCAG | 2 cut(s) | 256, 274 |
| BsrDI | GCAATG | 1 cut(s) | 352 |
| BsrI | ACTGG | 1 cut(s) | 42 |
| BssMI | GATC | 1 cut(s) | 451 |
| BstC8I | GCNNGC | 1 cut(s) | 381 |
| BstDEI | CTNAG | 3 cut(s) | 100, 243, 282 |
| BstF5I | GGATG | 1 cut(s) | 238 |
| BstKTI | GATC | 1 cut(s) | 454 |
| BstMAI | GTCTC | 1 cut(s) | 395 |
| BstMBI | GATC | 1 cut(s) | 451 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 389 |
| BstNSI | RCATGY | 1 cut(s) | 383 |
| BstV1I | GCAGC | 2 cut(s) | 124, 244 |
| Bsu36I | CCTNAGG | 1 cut(s) | 243 |
| BsuI | GTATCC | 1 cut(s) | 436 |
| BtsCI | GGATG | 1 cut(s) | 238 |
| BtsI | GCAGTG | 1 cut(s) | 297 |
| BtsIMutI | CAGTG | 1 cut(s) | 297 |
| Cac8I | GCNNGC | 1 cut(s) | 381 |
| Csp6I | GTAC | 3 cut(s) | 227, 309, 336 |
| CviAII | CATG | 2 cut(s) | 157, 380 |
| CviJI | RGCY | 5 cut(s) | 77, 99, 104, 233, 449 |
| CviKI_1 | RGCY | 5 cut(s) | 77, 99, 104, 233, 449 |
| CviQI | GTAC | 3 cut(s) | 227, 309, 336 |
| DdeI | CTNAG | 3 cut(s) | 100, 243, 282 |
| DpnI | GATC | 1 cut(s) | 453 |
| DpnII | GATC | 1 cut(s) | 451 |
| Eco81I | CCTNAGG | 1 cut(s) | 243 |
| FaeI | CATG | 2 cut(s) | 160, 383 |
| FaiI | YATR | 9 cut(s) | 37, 39, 153, 158, 179, 187, 317, 381, 446 |
| FatI | CATG | 2 cut(s) | 156, 379 |
| FauNDI | CATATG | 1 cut(s) | 37 |
| FbaI | TGATCA | 1 cut(s) | 451 |
| FblI | GTMKAC | 1 cut(s) | 67 |
| Fnu4HI | GCNGC | 2 cut(s) | 138, 258 |
| FokI | GGATG | 1 cut(s) | 225 |
| Fsp4HI | GCNGC | 2 cut(s) | 138, 258 |
| FspBI | CTAG | 2 cut(s) | 168, 342 |
| GluI | GCNGC | 2 cut(s) | 138, 258 |
| GsuI | CTGGAG | 1 cut(s) | 348 |
| Hin1II | CATG | 2 cut(s) | 160, 383 |
| HinfI | GANTC | 3 cut(s) | 21, 320, 403 |
| Hpy166II | GTNNAC | 1 cut(s) | 68 |
| Hpy188I | TCNGA | 1 cut(s) | 400 |
| Hpy188III | TCNNGA | 4 cut(s) | 18, 50, 281, 327 |
| Hpy8I | GTNNAC | 1 cut(s) | 68 |
| HpyAV | CCTTC | 1 cut(s) | 326 |
| HpyCH4V | TGCA | 3 cut(s) | 87, 160, 260 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 389 |
| HpyF3I | CTNAG | 3 cut(s) | 100, 243, 282 |
| Hsp92II | CATG | 2 cut(s) | 160, 383 |
| Ksp22I | TGATCA | 1 cut(s) | 451 |
| Kzo9I | GATC | 1 cut(s) | 451 |
| LpnPI | CCDG | 6 cut(s) | 55, 90, 230, 294, 312, 338 |
| Lsp1109I | GCAGC | 2 cut(s) | 124, 244 |
| LweI | GCATC | 1 cut(s) | 269 |
| MaeI | CTAG | 2 cut(s) | 168, 342 |
| MaeIII | GTNAC | 1 cut(s) | 130 |
| MalI | GATC | 1 cut(s) | 453 |
| MboI | GATC | 1 cut(s) | 451 |
| MluCI | AATT | 5 cut(s) | 29, 91, 120, 148, 289 |
| MlyI | GAGTC | 3 cut(s) | 30, 314, 397 |
| MnlI | CCTC | 4 cut(s) | 252, 288, 433, 439 |
| MseI | TTAA | 2 cut(s) | 113, 249 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 389 |
| NdeI | CATATG | 1 cut(s) | 37 |
| NdeII | GATC | 1 cut(s) | 451 |
| NlaIII | CATG | 2 cut(s) | 160, 383 |
| NmuCI | GTSAC | 1 cut(s) | 130 |
| NspI | RCATGY | 1 cut(s) | 383 |
| PaeI | GCATGC | 1 cut(s) | 383 |
| PkrI | GCNGC | 2 cut(s) | 139, 259 |
| PleI | GAGTC | 3 cut(s) | 29, 314, 397 |
| PpsI | GAGTC | 3 cut(s) | 29, 314, 397 |
| RsaI | GTAC | 3 cut(s) | 228, 310, 337 |
| RsaNI | GTAC | 3 cut(s) | 227, 309, 336 |
| SaqAI | TTAA | 2 cut(s) | 113, 249 |
| SatI | GCNGC | 2 cut(s) | 138, 258 |
| Sau3AI | GATC | 1 cut(s) | 451 |
| SchI | GAGTC | 3 cut(s) | 30, 314, 397 |
| SetI | ASST | 8 cut(s) | 60, 101, 106, 178, 235, 249, 337, 357 |
| SfaNI | GCATC | 1 cut(s) | 269 |
| SmlI | CTYRAG | 1 cut(s) | 16 |
| SmoI | CTYRAG | 1 cut(s) | 16 |
| SphI | GCATGC | 1 cut(s) | 383 |
| Sse9I | AATT | 5 cut(s) | 29, 91, 120, 148, 289 |
| SspI | AATATT | 1 cut(s) | 253 |
| SspMI | CTAG | 2 cut(s) | 168, 342 |
| TaqI | TCGA | 1 cut(s) | 109 |
| TasI | AATT | 5 cut(s) | 29, 91, 120, 148, 289 |
| TatI | WGTACW | 1 cut(s) | 308 |
| Tru1I | TTAA | 2 cut(s) | 113, 249 |
| Tru9I | TTAA | 2 cut(s) | 113, 249 |
| TscAI | CASTG | 1 cut(s) | 304 |
| TseFI | GTSAC | 1 cut(s) | 130 |
| TseI | GCWGC | 2 cut(s) | 137, 257 |
| Tsp45I | GTSAC | 1 cut(s) | 130 |
| TspRI | CASTG | 1 cut(s) | 304 |
| XapI | RAATTY | 2 cut(s) | 29, 91 |
| XceI | RCATGY | 1 cut(s) | 383 |
| XmiI | GTMKAC | 1 cut(s) | 67 |
| XspI | CTAG | 2 cut(s) | 168, 342 |