Ribonuclease H
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 179 |
| Acc65I | GGTACC | 1 cut(s) | 212 |
| AccB1I | GGYRCC | 1 cut(s) | 212 |
| AcsI | RAATTY | 1 cut(s) | 224 |
| AfaI | GTAC | 2 cut(s) | 86, 214 |
| AflII | CTTAAG | 1 cut(s) | 89 |
| AgsI | TTSAA | 1 cut(s) | 44 |
| AluBI | AGCT | 3 cut(s) | 30, 170, 175 |
| AluI | AGCT | 3 cut(s) | 30, 170, 175 |
| ApoI | RAATTY | 1 cut(s) | 224 |
| Asp718I | GGTACC | 1 cut(s) | 212 |
| BanI | GGYRCC | 1 cut(s) | 212 |
| BccI | CCATC | 1 cut(s) | 203 |
| BclI | TGATCA | 1 cut(s) | 112 |
| BfaI | CTAG | 1 cut(s) | 141 |
| BfrI | CTTAAG | 1 cut(s) | 89 |
| BlpI | GCTNAGC | 1 cut(s) | 171 |
| BmiI | GGNNCC | 1 cut(s) | 214 |
| BpmI | CTGGAG | 1 cut(s) | 52 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 171 |
| BseMII | CTCAG | 1 cut(s) | 162 |
| BshNI | GGYRCC | 1 cut(s) | 212 |
| Bsp143I | GATC | 1 cut(s) | 112 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 171 |
| BspCNI | CTCAG | 1 cut(s) | 163 |
| BspLI | GGNNCC | 1 cut(s) | 214 |
| BspT107I | GGYRCC | 1 cut(s) | 212 |
| BspTI | CTTAAG | 1 cut(s) | 89 |
| BssMI | GATC | 1 cut(s) | 112 |
| Bst4CI | ACNGT | 1 cut(s) | 137 |
| BstAFI | CTTAAG | 1 cut(s) | 89 |
| BstDEI | CTNAG | 1 cut(s) | 171 |
| BstKTI | GATC | 1 cut(s) | 115 |
| BstMBI | GATC | 1 cut(s) | 112 |
| BtgZI | GCGATG | 1 cut(s) | 222 |
| Csp6I | GTAC | 2 cut(s) | 85, 213 |
| CviAII | CATG | 2 cut(s) | 13, 164 |
| CviJI | RGCY | 6 cut(s) | 11, 30, 57, 65, 170, 175 |
| CviKI_1 | RGCY | 6 cut(s) | 11, 30, 57, 65, 170, 175 |
| CviQI | GTAC | 2 cut(s) | 85, 213 |
| DdeI | CTNAG | 1 cut(s) | 171 |
| DpnI | GATC | 1 cut(s) | 114 |
| DpnII | GATC | 1 cut(s) | 112 |
| FaeI | CATG | 2 cut(s) | 16, 167 |
| FaiI | YATR | 5 cut(s) | 14, 61, 71, 165, 179 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 32 |
| FatI | CATG | 2 cut(s) | 12, 163 |
| FbaI | TGATCA | 1 cut(s) | 112 |
| FspBI | CTAG | 1 cut(s) | 141 |
| GsuI | CTGGAG | 1 cut(s) | 52 |
| Hin1II | CATG | 2 cut(s) | 16, 167 |
| HinfI | GANTC | 1 cut(s) | 187 |
| Hpy188I | TCNGA | 2 cut(s) | 79, 133 |
| HpyAV | CCTTC | 1 cut(s) | 138 |
| HpyCH4III | ACNGT | 1 cut(s) | 137 |
| HpyCH4V | TGCA | 1 cut(s) | 99 |
| HpyF3I | CTNAG | 1 cut(s) | 171 |
| Hsp92II | CATG | 2 cut(s) | 16, 167 |
| KpnI | GGTACC | 1 cut(s) | 216 |
| Ksp22I | TGATCA | 1 cut(s) | 112 |
| Kzo9I | GATC | 1 cut(s) | 112 |
| LmnI | GCTCC | 1 cut(s) | 167 |
| LpnPI | CCDG | 1 cut(s) | 16 |
| MaeI | CTAG | 1 cut(s) | 141 |
| MaeIII | GTNAC | 1 cut(s) | 47 |
| MalI | GATC | 1 cut(s) | 114 |
| MboI | GATC | 1 cut(s) | 112 |
| MluCI | AATT | 2 cut(s) | 94, 224 |
| MnlI | CCTC | 3 cut(s) | 135, 146, 226 |
| MseI | TTAA | 4 cut(s) | 21, 90, 192, 222 |
| MspCI | CTTAAG | 1 cut(s) | 89 |
| NdeII | GATC | 1 cut(s) | 112 |
| NlaIII | CATG | 2 cut(s) | 16, 167 |
| NlaIV | GGNNCC | 1 cut(s) | 214 |
| NmuCI | GTSAC | 1 cut(s) | 47 |
| PfeI | GAWTC | 1 cut(s) | 187 |
| PsiI | TTATAA | 1 cut(s) | 179 |
| PspN4I | GGNNCC | 1 cut(s) | 214 |
| RsaI | GTAC | 2 cut(s) | 86, 214 |
| RsaNI | GTAC | 2 cut(s) | 85, 213 |
| SaqAI | TTAA | 4 cut(s) | 21, 90, 192, 222 |
| Sau3AI | GATC | 1 cut(s) | 112 |
| SetI | ASST | 5 cut(s) | 32, 90, 172, 177, 218 |
| SgeI | CNNG | 9 cut(s) | 20, 25, 29, 43, 64, 153, 159, 176, 212 |
| SmlI | CTYRAG | 1 cut(s) | 89 |
| SmoI | CTYRAG | 1 cut(s) | 89 |
| Sse9I | AATT | 2 cut(s) | 94, 224 |
| SspMI | CTAG | 1 cut(s) | 141 |
| TaaI | ACNGT | 1 cut(s) | 137 |
| TasI | AATT | 2 cut(s) | 94, 224 |
| TfiI | GAWTC | 1 cut(s) | 187 |
| Tru1I | TTAA | 4 cut(s) | 21, 90, 192, 222 |
| Tru9I | TTAA | 4 cut(s) | 21, 90, 192, 222 |
| TseFI | GTSAC | 1 cut(s) | 47 |
| Tsp45I | GTSAC | 1 cut(s) | 47 |
| TspDTI | ATGAA | 2 cut(s) | 17, 152 |
| Vha464I | CTTAAG | 1 cut(s) | 89 |
| XapI | RAATTY | 1 cut(s) | 224 |
| XspI | CTAG | 1 cut(s) | 141 |