Rh7DG403600

Ribosome production factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000041
Physical Location & Seq
Forward (+)
55765802 .. 55773295
7494 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG403600.1

Sequence Viewer

Length: 1164 bp
ATGGTGATTCGAGAAAAGTTGTTCAGATCTCTATTGAAGAGGGGTCCTGCTTTTATAGAGGAACTACTTTCGGTGATCCCAAATGCGCAGTACTATAAAAGAGACACTTATGACTTGAAAAAGATTATAGAGTATGCAAATAAAAAGGAATTCACTTCTTTAATTGTTGTTCATACCAATCACCGGGAACCAGATGCTCTCCTAATTATTGGCTTACCTAATGGCCCTACTGCCCATTTTAAGCTCTCAAAGCTTGTTTTACGGAAGGATATCAAGAATCATGGAAATCCAACCAGTCATGAGCTTGAGCTTGTATTAAACAACTTTACAACACGCCTTGGTCATCGTATTGGGAGGTACATTTTTGAAACCAAAGAGACTAAACAGGCTGAAGTAAAGGGCAAAAACACCAAGGATTCCAAAGCTGACACTATTACTGAAGCAAAACCATTTGCGCGCCTACAGATCTTAACGGTCTTTCCTGTCTTAAACACTCAGGAATGTGGTCCTCGTTTTACCCTTAAATTGATCAGTCTGCAACAAGGGACATTTGATCCTAGAGGCGGGGAGTTTGAGTGGGTTCACAAGGAGTTGAATGAGGAAGAAAAGGATGAGAAGAATGGCCAGGAAACTAATGCCAGTGACGTTCCTACACTCCCAGATCTCATGAAAAGTTGGAATAACCCTCAAGCAAAGACAAAGCATTCAAAACTTCATGCTGAACCTAAGGGGGAAAAGGTGGATAATGGCAAGAAAAGGCATGCCCTGGCAGCCAATGATAAGAACACTAAAGAGAAGGGACTTGCTAGAGTCCCAATGAAGGATGTTTCTAATTTTGGTAATGCTGGCAGCAGCTCCAAAACCAAAGTGCAGTATCAAAGAAAAAATAAAGCTCTTAGTACCTGTGAGCCTCCTGTCCAATGCGCCCAACTTACAAATCCAACAATCATCTCTATGGAGCAGAATGTTGCGAATTCTTGTGTGGCAGCTGAATTTGGTCATTGCCCCCCTGAGGAGTTATTGGGAGGTATTGAATGTCTGATGACTGAAGTAGTTGTGAATGCTACAAATGTTGTGGAGCAAACTCTGGTCAAGAATATTGTCTTGTCACAAGAAAACAACATGTCTCCCACTGTTGGGGATGATATGGTTTCTGACATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Brix

Protein Analysis

387

Amino Acids

43.35

Weight (kDa)

8.69

Isoelectric Point (pI)

33.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Brix PF04427 17 - 177 5.3e-14 Brix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01050
fragaria_vesca FvH4_1g24181 FvH4_1g28741 FvH4_1g29781 FvH4_2g00621 FvH4_2g04885 FvH4_2g11953 FvH4_2g11954 FvH4_2g12001 FvH4_2g12002 FvH4_2g12222 FvH4_2g12223 FvH4_2g38351 FvH4_3g04401 FvH4_3g31330 FvH4_3g33091 FvH4_4g11461 FvH4_5g27993 FvH4_5g27994 FvH4_5g28072 FvH4_5g28231 FvH4_5g28591 FvH4_5g34261 FvH4_6g18162 FvH4_6g25500 FvH4_6g25561 FvH4_6g25792 FvH4_6g27602 FvH4_6g46881
malus_domestica MD03G1019700.v1.1
prunus_persica Prupe.1G055400_v2.0.a1 Prupe.1G179200_v2.0.a1 Prupe.1G208200_v2.0.a1 Prupe.1G231200_v2.0.a1 Prupe.2G044900_v2.0.a1 Prupe.2G055100_v2.0.a1 Prupe.2G097600_v2.0.a1 Prupe.2G114200_v2.0.a1 Prupe.3G109000_v2.0.a1 Prupe.3G109300_v2.0.a1 Prupe.3G109600_v2.0.a1 Prupe.4G246900_v2.0.a1 Prupe.5G026400_v2.0.a1
pyrus_communis pycom05g17130 pycom07g06820 pycom07g18590 pycom07g22730 pycom12401g00120 pycom12401g00180 pycom420g00470
rosa_chinensis RchiOBHm_Chr1g0342591 RchiOBHm_Chr1g0342601 RchiOBHm_Chr1g0342611 RchiOBHm_Chr1g0351011 RchiOBHm_Chr2g0146151 RchiOBHm_Chr2g0171821 RchiOBHm_Chr3g0492921 RchiOBHm_Chr3g0492931 RchiOBHm_Chr4g0406871 RchiOBHm_Chr4g0426311 RchiOBHm_Chr5g0020721 RchiOBHm_Chr5g0050111 RchiOBHm_Chr5g0051681 RchiOBHm_Chr5g0053531 RchiOBHm_Chr5g0054841 RchiOBHm_Chr5g0055061 RchiOBHm_Chr5g0055071 RchiOBHm_Chr6g0248911 RchiOBHm_Chr6g0291741 RchiOBHm_Chr7g0187781 RchiOBHm_Chr7g0220081 RchiOBHm_Chr7g0224391 RchiOBHm_Chr7g0235221
rosa_laevigata RLG00000002133 RLG00000002402 RLG00000002736 RLG00000011046 RLG00000013214 RLG00000016550 RLG00000021669 RLG00000022948 RLG00000023691 RLG00000024682 RLG00000027826 RLG00000029734 RLG00000029831 RLG00000030305 RLG00000037042
rosa_multiflora Rmu_co7992532.1_g000001 Rmu_co8021462.1_g000001 Rmu_co8229237.1_g000001 Rmu_co8281571.1_g000001 Rmu_co8326451.1_g000001 Rmu_co8359553.1_g000001 Rmu_co8372117.1_g000001 Rmu_co8427177.1_g000001 Rmu_co8474063.1_g000002 Rmu_sc0000007.1_g000020 Rmu_sc0000173.1_g000002 Rmu_sc0000367.1_g000086 Rmu_sc0000367.1_g000088 Rmu_sc0000559.1_g000002 Rmu_sc0000733.1_g000014 Rmu_sc0000745.1_g000006 Rmu_sc0000791.1_g000046 Rmu_sc0000791.1_g000049 Rmu_sc0000824.1_g000010 Rmu_sc0000824.1_g000011 Rmu_sc0000834.1_g000009 Rmu_sc0000834.1_g000011 Rmu_sc0000911.1_g000020 Rmu_sc0000935.1_g000034 Rmu_sc0000935.1_g000051 Rmu_sc0000935.1_g000053 Rmu_sc0001000.1_g000005 Rmu_sc0001000.1_g000006 Rmu_sc0001150.1_g000004 Rmu_sc0001227.1_g000002 Rmu_sc0001322.1_g000018 Rmu_sc0001343.1_g000001 Rmu_sc0001356.1_g000004 Rmu_sc0001356.1_g000005 Rmu_sc0001363.1_g000007 Rmu_sc0001463.1_g000012 Rmu_sc0001484.1_g000023 Rmu_sc0001516.1_g000003 Rmu_sc0001516.1_g000005 Rmu_sc0001619.1_g000005 Rmu_sc0001648.1_g000032 Rmu_sc0001648.1_g000035 Rmu_sc0001694.1_g000008 Rmu_sc0001809.1_g000023 Rmu_sc0002093.1_g000027 Rmu_sc0002231.1_g000004 Rmu_sc0002245.1_g000001 Rmu_sc0002245.1_g000003 Rmu_sc0002354.1_g000045 Rmu_sc0002354.1_g000048 Rmu_sc0002368.1_g000014 Rmu_sc0002368.1_g000016 Rmu_sc0002368.1_g000017 Rmu_sc0002401.1_g000030 Rmu_sc0002487.1_g000012 Rmu_sc0002798.1_g000028 Rmu_sc0002923.1_g000012 Rmu_sc0002960.1_g000002 Rmu_sc0003033.1_g000072 Rmu_sc0003133.1_g000015 Rmu_sc0003168.1_g000007 Rmu_sc0003945.1_g000002 Rmu_sc0003945.1_g000004 Rmu_sc0003945.1_g000005 Rmu_sc0003979.1_g000004 Rmu_sc0004005.1_g000007 Rmu_sc0004059.1_g000018 Rmu_sc0004064.1_g000001 Rmu_sc0004083.1_g000007 Rmu_sc0004083.1_g000008 Rmu_sc0004354.1_g000033 Rmu_sc0004368.1_g000035 Rmu_sc0004483.1_g000032 Rmu_sc0004646.1_g000012 Rmu_sc0005014.1_g000006 Rmu_sc0005016.1_g000046 Rmu_sc0005016.1_g000051 Rmu_sc0005033.1_g000005 Rmu_sc0005033.1_g000007 Rmu_sc0005065.1_g000002 Rmu_sc0005065.1_g000004 Rmu_sc0005168.1_g000012 Rmu_sc0005238.1_g000001 Rmu_sc0005365.1_g000012 Rmu_sc0005631.1_g000005 Rmu_sc0005704.1_g000013 Rmu_sc0005704.1_g000014 Rmu_sc0005781.1_g000030 Rmu_sc0005789.1_g000016 Rmu_sc0006185.1_g000001 Rmu_sc0006185.1_g000002 Rmu_sc0006266.1_g000044 Rmu_sc0006561.1_g000018 Rmu_sc0006695.1_g000016 Rmu_sc0007739.1_g000022 Rmu_sc0008050.1_g000013 Rmu_sc0008169.1_g000006 Rmu_sc0008855.1_g000006 Rmu_sc0009298.1_g000002 Rmu_sc0009495.1_g000005 Rmu_sc0010608.1_g000003 Rmu_sc0010958.1_g000005 Rmu_sc0011506.1_g000001 Rmu_sc0011790.1_g000002 Rmu_sc0011790.1_g000003 Rmu_sc0012042.1_g000004 Rmu_sc0012042.1_g000005 Rmu_sc0012140.1_g000020 Rmu_sc0012726.1_g000005 Rmu_sc0012746.1_g000023 Rmu_sc0013193.1_g000002 Rmu_sc0013193.1_g000003 Rmu_sc0017997.1_g000001 Rmu_sc0021401.1_g000001 Rmu_sc0025959.1_g000001 Rmu_sc0026403.1_g000003 Rmu_sc0028616.1_g000002 Rmu_sc0029801.1_g000002 Rmu_sc0032453.1_g000001 Rmu_sc0033672.1_g000002 Rmu_sc0034553.1_g000001 Rmu_sc0036883.1_g000001 Rmu_ssc0000096.1_g000001 Rmu_ssc0000158.1_g000031 Rmu_ssc0000291.1_g000034 Rmu_ssc0000381.1_g000026 Rmu_ssc0000387.1_g000010 Rmu_ssc0000474.1_g000002 Rmu_ssc0000474.1_g000004
rosa_roxburghii Rroxscaffold_1G00020090 Rroxscaffold_1G00020100 Rroxscaffold_1G00022940 Rroxscaffold_1G00044600 Rroxscaffold_1G00054420 Rroxscaffold_1G00054430 Rroxscaffold_1G00056440 Rroxscaffold_2G00090180 Rroxscaffold_2G00101250 Rroxscaffold_2G00110600 Rroxscaffold_2G00152800 Rroxscaffold_4G00320370 Rroxscaffold_4G00320640 Rroxscaffold_4G00322420 Rroxscaffold_4G00324670 Rroxscaffold_5G00332760 Rroxscaffold_5G00345010 Rroxscaffold_5G00345020 Rroxscaffold_5G00355470 Rroxscaffold_5G00385520 Rroxscaffold_6G00394610 Rroxscaffold_6G00394700 Rroxscaffold_7G00164190 Rroxscaffold_7G00182750 Rroxscaffold_7G00183540 Rroxscaffold_7G00203520 Rroxscaffold_7G00211630
rosa_rugosa Rorug01G0041400 Rorug01G0041500 Rorug01G0065300 Rorug01G0065300 Rorug01G0069700 Rorug01G0069800 Rorug01G0070300 Rorug01G0072300 Rorug01G0072900 Rorug01G0093100 Rorug01G0147100.1 Rorug01G0196900 Rorug01G0259700 Rorug02G0162000 Rorug02G0182700 Rorug02G0212300 Rorug02G0214700 Rorug02G0229900 Rorug02G0246100 Rorug02G0257400 Rorug02G0259100 Rorug02G0341400 Rorug02G0341500 Rorug02G0341700 Rorug02G0341800 Rorug02G0355600 Rorug02G0386100 Rorug02G0386100 Rorug02G0387000 Rorug02G0387100 Rorug02G0388400 Rorug02G0388500 Rorug02G0429100 Rorug02G0429100 Rorug02G0455300 Rorug02G0634400 Rorug03G0163200 Rorug03G0198500 Rorug03G0199600 Rorug03G0204000 Rorug03G0265600 Rorug03G0266100 Rorug03G0266200 Rorug03G0280600 Rorug03G0348200 Rorug03G0349700 Rorug03G0349800 Rorug04G0020200 Rorug04G0073700 Rorug04G0215000 Rorug04G0426100 Rorug05G0064200 Rorug05G0064300 Rorug05G0265700 Rorug05G0287400 Rorug05G0287500 Rorug05G0287500 Rorug05G0405000 Rorug05G0525700 Rorug05G0525800 Rorug05G0588200 Rorug06G0038200 Rorug06G0057900 Rorug06G0058000 Rorug06G0058500 Rorug06G0058600 Rorug06G0116700 Rorug06G0159300.1 Rorug06G0159400 Rorug06G0174700 Rorug06G0375500 Rorug07G0091400 Rorug07G0094900 Rorug07G0108100 Rorug07G0140700 Rorug07G0140700 Rorug07G0207100 Rorug07G0207100 Rorug07G0207200 Rorug07G0287300
rosa_samantha Rh1AG100100 Rh1AG104500 Rh1BG150700 Rh1BG237700 Rh1BG334000 Rh1CG090000 Rh1CG100100 Rh1CG347300 Rh1DG090500 Rh1DG096100 Rh1DG107400 Rh1DG182500 Rh1DG265700 Rh1DG365200 Rh2BG256800 Rh2BG361300 Rh2BG468600 Rh2BG549800 Rh2CG270900 Rh2DG276700 Rh2DG276800 Rh2DG377700 Rh2DG477900 Rh3AG161200 Rh3BG138800 Rh3BG185700 Rh3BG269600 Rh3CG176000 Rh4AG006100 Rh4AG216700 Rh4AG355800 Rh4CG108600 Rh5AG141700 Rh5AG480000 Rh5BG014500 Rh5BG134600 Rh5BG295400 Rh5BG552900 Rh5CG058600 Rh5CG286400 Rh5CG350900 Rh5CG575800 Rh5DG004300 Rh5DG254600 Rh5DG356500 Rh6AG106500 Rh6AG191100 Rh6AG224700 Rh6BG074700 Rh6BG181400 Rh6BG352200 Rh6BG408400 Rh6BG453600 Rh6CG047400 Rh6CG172200 Rh6CG189400 Rh6CG515800 Rh6DG042900 Rh6DG163400 Rh7AG089300 Rh7AG227400 Rh7AG275600 Rh7AG375100 Rh7AG460900 Rh7AG485200 Rh7BG146100 Rh7BG354300 Rh7CG077100 Rh7CG294500 Rh7CG393800 Rh7DG041700 Rh7DG062700 Rh7DG091700 Rh7DG178900 Rh7DG192300 Rh7DG297000 Rh7DG403600 Rh7DG411800
rosa_wichuraiana Rw0G007100 Rw0G011430 Rw1G003580 Rw1G004040 Rw1G005880 Rw1G009860 Rw1G009990 Rw1G012190 Rw1G012200 Rw1G013740 Rw1G013750 Rw1G016710 Rw1G021050 Rw2G023790 Rw2G028810 Rw2G035890 Rw2G036250 Rw4G008880 Rw4G014380 Rw4G014390 Rw4G016020 Rw4G037160 Rw5G010060 Rw5G030620 Rw5G033840 Rw5G049840 Rw5G049850 Rw6G003450 Rw6G015080 Rw7G019640 Rw7G024060 Rw7G024070 Rw7G029090 Rw7G037010 Rw7G039170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 87
AccII CGCG 1 cut(s) 457
AciI CCGC 1 cut(s) 564
AclWI GGATC 2 cut(s) 70, 548
AcoI YGGCCR 1 cut(s) 622
AcsI RAATTY 3 cut(s) 149, 973, 992
AcuI CTGAAG 3 cut(s) 411, 459, 1068
AfaI GTAC 3 cut(s) 92, 359, 901
AfiI CCNNNNNNNGG 6 cut(s) 183, 563, 820, 1012, 1136, 1137
AflIII ACRYGT 1 cut(s) 1122
AgsI TTSAA 6 cut(s) 37, 118, 368, 595, 708, 1034
AjnI CCWGG 2 cut(s) 624, 765
AluBI AGCT 8 cut(s) 244, 253, 304, 310, 425, 855, 893, 989
AluI AGCT 8 cut(s) 244, 253, 304, 310, 425, 855, 893, 989
Alw26I GTCTC 3 cut(s) 96, 371, 1131
AlwI GGATC 2 cut(s) 70, 548
AoxI GGCC 2 cut(s) 223, 622
ApeKI GCWGC 4 cut(s) 770, 849, 852, 986
ApoI RAATTY 3 cut(s) 149, 973, 992
AspLEI GCGC 4 cut(s) 88, 457, 459, 926
AspS9I GGNCC 3 cut(s) 44, 224, 506
AsuC2I CCSGG 1 cut(s) 185
AsuHPI GGTGA 3 cut(s) 16, 85, 173
AvaII GGWCC 2 cut(s) 44, 506
AxyI CCTNAGG 2 cut(s) 726, 1011
BalI TGGCCA 1 cut(s) 624
BbvI GCAGC 4 cut(s) 782, 861, 864, 998
BciT130I CCWGG 2 cut(s) 626, 767
BclI TGATCA 1 cut(s) 528
BcnI CCSGG 1 cut(s) 185
BcoDI GTCTC 3 cut(s) 96, 371, 1131
BfaI CTAG 2 cut(s) 558, 807
BfmI CTRYAG 1 cut(s) 461
BglII AGATCT 3 cut(s) 26, 465, 661
BisI GCNGC 4 cut(s) 771, 850, 853, 987
BlsI GCNGC 4 cut(s) 772, 851, 854, 988
BmcAI AGTACT 1 cut(s) 92
Bme1390I CCNGG 3 cut(s) 185, 626, 767
Bme18I GGWCC 2 cut(s) 44, 506
BmgT120I GGNCC 3 cut(s) 44, 224, 506
BmiI GGNNCC 2 cut(s) 45, 189
BmrFI CCNGG 3 cut(s) 185, 626, 767
BmsI GCATC 1 cut(s) 184
BpuEI CTTGAG 2 cut(s) 326, 672
BpuMI CCSGG 1 cut(s) 185
BsaJI CCNNGG 3 cut(s) 337, 411, 765
BsaXI ACNNNNNCTCC 2 cut(s) 560, 590
Bsc4I CCNNNNNNNGG 6 cut(s) 183, 563, 820, 1012, 1136, 1137
Bse1I ACTGG 2 cut(s) 294, 639
Bse21I CCTNAGG 2 cut(s) 726, 1011
Bse3DI GCAATG 1 cut(s) 1000
BseBI CCWGG 2 cut(s) 626, 767
BseDI CCNNGG 3 cut(s) 337, 411, 765
BseGI GGATG 3 cut(s) 616, 829, 1147
BseLI CCNNNNNNNGG 6 cut(s) 183, 563, 820, 1012, 1136, 1137
BseMI GCAATG 1 cut(s) 1000
BseMII CTCAG 2 cut(s) 509, 1002
BseNI ACTGG 2 cut(s) 294, 639
BsePI GCGCGC 1 cut(s) 455
BseRI GAGGAG 1 cut(s) 1028
BseXI GCAGC 4 cut(s) 782, 861, 864, 998
BsgI GTGCAG 1 cut(s) 890
Bsh1236I CGCG 1 cut(s) 457
BshFI GGCC 2 cut(s) 225, 624
BsiSI CCGG 1 cut(s) 184
BslFI GGGAC 3 cut(s) 559, 797, 813
BslI CCNNNNNNNGG 6 cut(s) 183, 563, 820, 1012, 1136, 1137
BsmAI GTCTC 3 cut(s) 96, 371, 1131
BsmFI GGGAC 3 cut(s) 559, 797, 813
BsmI GAATGC 2 cut(s) 703, 1066
BsnI GGCC 2 cut(s) 225, 624
Bsp143I GATC 6 cut(s) 26, 75, 465, 528, 553, 661
BspACI CCGC 1 cut(s) 564
BspANI GGCC 2 cut(s) 225, 624
BspCNI CTCAG 2 cut(s) 508, 1003
BspFNI CGCG 1 cut(s) 457
BspHI TCATGA 2 cut(s) 298, 666
BspLI GGNNCC 2 cut(s) 45, 189
BspPI GGATC 2 cut(s) 70, 548
BsrDI GCAATG 1 cut(s) 1000
BsrI ACTGG 2 cut(s) 294, 639
BssECI CCNNGG 3 cut(s) 337, 411, 765
BssHII GCGCGC 1 cut(s) 455
BssMI GATC 6 cut(s) 26, 75, 465, 528, 553, 661
BssT1I CCWWGG 2 cut(s) 337, 411
Bst2UI CCWGG 2 cut(s) 626, 767
Bst4CI ACNGT 2 cut(s) 475, 1135
Bst6I CTCTTC 1 cut(s) 32
BstC8I GCNNGC 3 cut(s) 457, 762, 847
BstDEI CTNAG 4 cut(s) 495, 726, 896, 1011
BstF5I GGATG 3 cut(s) 616, 829, 1147
BstFNI CGCG 1 cut(s) 457
BstHHI GCGC 4 cut(s) 88, 457, 459, 926
BstKTI GATC 6 cut(s) 29, 78, 468, 531, 556, 664
BstMAI GTCTC 3 cut(s) 96, 371, 1131
BstMBI GATC 6 cut(s) 26, 75, 465, 528, 553, 661
BstMWI GCNNNNNNNGC 2 cut(s) 250, 770
BstNI CCWGG 2 cut(s) 626, 767
BstNSI RCATGY 2 cut(s) 764, 1126
BstSCI CCNGG 3 cut(s) 183, 624, 765
BstSFI CTRYAG 1 cut(s) 461
BstUI CGCG 1 cut(s) 457
BstV1I GCAGC 4 cut(s) 782, 861, 864, 998
BstX2I RGATCY 3 cut(s) 26, 465, 661
BstYI RGATCY 3 cut(s) 26, 465, 661
Bsu36I CCTNAGG 2 cut(s) 726, 1011
BsuRI GGCC 2 cut(s) 225, 624
BtsCI GGATG 3 cut(s) 616, 829, 1147
BtsIMutI CAGTG 2 cut(s) 646, 1131
Cac8I GCNNGC 3 cut(s) 457, 762, 847
CciI TCATGA 2 cut(s) 298, 666
CfoI GCGC 4 cut(s) 88, 457, 459, 926
Cfr13I GGNCC 3 cut(s) 44, 224, 506
Csp6I GTAC 3 cut(s) 91, 358, 900
CspCI CAANNNNNGTGG 2 cut(s) 1056, 1091
CviAII CATG 6 cut(s) 281, 299, 667, 716, 761, 1123
CviQI GTAC 3 cut(s) 91, 358, 900
DdeI CTNAG 4 cut(s) 495, 726, 896, 1011
DpnI GATC 6 cut(s) 28, 77, 467, 530, 555, 663
DpnII GATC 6 cut(s) 26, 75, 465, 528, 553, 661
EaeI YGGCCR 1 cut(s) 622
Eam1104I CTCTTC 1 cut(s) 32
EarI CTCTTC 1 cut(s) 32
Eco130I CCWWGG 2 cut(s) 337, 411
Eco32I GATATC 1 cut(s) 271
Eco47I GGWCC 2 cut(s) 44, 506
Eco57I CTGAAG 3 cut(s) 411, 459, 1068
Eco81I CCTNAGG 2 cut(s) 726, 1011
EcoO109I RGGNCCY 1 cut(s) 44
EcoRI GAATTC 2 cut(s) 149, 973
EcoRII CCWGG 2 cut(s) 624, 765
EcoRV GATATC 1 cut(s) 271
EcoT14I CCWWGG 2 cut(s) 337, 411
ErhI CCWWGG 2 cut(s) 337, 411
FaeI CATG 6 cut(s) 284, 302, 670, 719, 764, 1126
FalI AAGNNNNNCTT 2 cut(s) 91, 123
FaqI GGGAC 3 cut(s) 559, 797, 813
FatI CATG 6 cut(s) 280, 298, 666, 715, 760, 1122
FauI CCCGC 1 cut(s) 557
FbaI TGATCA 1 cut(s) 528
Fnu4HI GCNGC 4 cut(s) 771, 850, 853, 987
FokI GGATG 3 cut(s) 623, 836, 1154
Fsp4HI GCNGC 4 cut(s) 771, 850, 853, 987
FspBI CTAG 2 cut(s) 558, 807
FspI TGCGCA 1 cut(s) 87
GlaI GCGC 4 cut(s) 87, 456, 458, 925
GluI GCNGC 4 cut(s) 771, 850, 853, 987
HaeIII GGCC 2 cut(s) 225, 624
HapII CCGG 1 cut(s) 184
HhaI GCGC 4 cut(s) 88, 457, 459, 926
Hin1II CATG 6 cut(s) 284, 302, 670, 719, 764, 1126
Hin6I GCGC 4 cut(s) 86, 455, 457, 924
HinP1I GCGC 4 cut(s) 86, 455, 457, 924
HindIII AAGCTT 1 cut(s) 251
HinfI GANTC 4 cut(s) 7, 277, 416, 810
HpaII CCGG 1 cut(s) 184
HphI GGTGA 3 cut(s) 16, 85, 173
Hpy166II GTNNAC 1 cut(s) 583
Hpy188I TCNGA 3 cut(s) 26, 1041, 1156
Hpy188III TCNNGA 6 cut(s) 11, 274, 299, 497, 667, 1093
Hpy8I GTNNAC 1 cut(s) 583
HpyAV CCTTC 3 cut(s) 259, 790, 814
HpyCH4III ACNGT 2 cut(s) 475, 1135
HpyCH4IV ACGT 1 cut(s) 645
HpyCH4V TGCA 3 cut(s) 137, 538, 871
HpyF10VI GCNNNNNNNGC 2 cut(s) 250, 770
HpyF3I CTNAG 4 cut(s) 495, 726, 896, 1011
HpySE526I ACGT 1 cut(s) 645
Hsp92II CATG 6 cut(s) 284, 302, 670, 719, 764, 1126
HspAI GCGC 4 cut(s) 86, 455, 457, 924
Ksp22I TGATCA 1 cut(s) 528
Kzo9I GATC 6 cut(s) 26, 75, 465, 528, 553, 661
LmnI GCTCC 3 cut(s) 860, 958, 1078
Lsp1109I GCAGC 4 cut(s) 782, 861, 864, 998
LweI GCATC 1 cut(s) 184
MaeI CTAG 2 cut(s) 558, 807
MaeII ACGT 1 cut(s) 645
MaeIII GTNAC 2 cut(s) 641, 1107
MalI GATC 6 cut(s) 28, 77, 467, 530, 555, 663
MboI GATC 6 cut(s) 26, 75, 465, 528, 553, 661
MboII GAAGA 3 cut(s) 49, 614, 628
MflI RGATCY 3 cut(s) 26, 465, 661
MlsI TGGCCA 1 cut(s) 624
MluCI AATT 7 cut(s) 149, 162, 204, 524, 832, 973, 992
MluNI TGGCCA 1 cut(s) 624
MlyI GAGTC 1 cut(s) 819
MmeI TCCRAC 3 cut(s) 314, 656, 965
Mox20I TGGCCA 1 cut(s) 624
MscI TGGCCA 1 cut(s) 624
MseI TTAA 6 cut(s) 161, 240, 317, 470, 488, 522
MslI CAYNNNNRTG 1 cut(s) 953
Msp20I TGGCCA 1 cut(s) 624
MspA1I CMGCKG 1 cut(s) 989
MspI CCGG 1 cut(s) 184
MspR9I CCNGG 3 cut(s) 185, 626, 767
Mva1269I GAATGC 2 cut(s) 703, 1066
MvaI CCWGG 2 cut(s) 626, 767
MvnI CGCG 1 cut(s) 457
MwoI GCNNNNNNNGC 2 cut(s) 250, 770
NciI CCSGG 1 cut(s) 185
NdeII GATC 6 cut(s) 26, 75, 465, 528, 553, 661
NlaIII CATG 6 cut(s) 284, 302, 670, 719, 764, 1126
NlaIV GGNNCC 2 cut(s) 45, 189
NmuCI GTSAC 2 cut(s) 641, 1107
NsbI TGCGCA 1 cut(s) 87
NspI RCATGY 2 cut(s) 764, 1126
PaeI GCATGC 1 cut(s) 764
PagI TCATGA 2 cut(s) 298, 666
PauI GCGCGC 1 cut(s) 455
PciI ACATGT 1 cut(s) 1122
PctI GAATGC 2 cut(s) 703, 1066
PfeI GAWTC 3 cut(s) 7, 277, 416
PkrI GCNGC 4 cut(s) 772, 851, 854, 988
PleI GAGTC 1 cut(s) 818
PpsI GAGTC 1 cut(s) 818
PpuMI RGGWCCY 1 cut(s) 44
PscI ACATGT 1 cut(s) 1122
Psp5II RGGWCCY 1 cut(s) 44
Psp6I CCWGG 2 cut(s) 624, 765
PspGI CCWGG 2 cut(s) 624, 765
PspN4I GGNNCC 2 cut(s) 45, 189
PspPI GGNCC 3 cut(s) 44, 224, 506
PspPPI RGGWCCY 1 cut(s) 44
PsuI RGATCY 3 cut(s) 26, 465, 661
PteI GCGCGC 1 cut(s) 455
PvuII CAGCTG 1 cut(s) 989
RsaI GTAC 3 cut(s) 92, 359, 901
RsaNI GTAC 3 cut(s) 91, 358, 900
RseI CAYNNNNRTG 1 cut(s) 953
SaqAI TTAA 6 cut(s) 161, 240, 317, 470, 488, 522
SatI GCNGC 4 cut(s) 771, 850, 853, 987
Sau3AI GATC 6 cut(s) 26, 75, 465, 528, 553, 661
Sau96I GGNCC 3 cut(s) 44, 224, 506
ScaI AGTACT 1 cut(s) 92
SchI GAGTC 1 cut(s) 819
ScrFI CCNGG 3 cut(s) 185, 626, 767
SfaNI GCATC 1 cut(s) 184
SfcI CTRYAG 1 cut(s) 461
SinI GGWCC 2 cut(s) 44, 506
SmiMI CAYNNNNRTG 1 cut(s) 953
SmlI CTYRAG 2 cut(s) 305, 687
SmoI CTYRAG 2 cut(s) 305, 687
SphI GCATGC 1 cut(s) 764
Sse9I AATT 7 cut(s) 149, 162, 204, 524, 832, 973, 992
SsiI CCGC 1 cut(s) 564
SspI AATATT 1 cut(s) 1099
SspMI CTAG 2 cut(s) 558, 807
StyD4I CCNGG 3 cut(s) 183, 624, 765
StyI CCWWGG 2 cut(s) 337, 411
TaaI ACNGT 2 cut(s) 475, 1135
TaiI ACGT 1 cut(s) 648
TaqI TCGA 1 cut(s) 10
TasI AATT 7 cut(s) 149, 162, 204, 524, 832, 973, 992
TatI WGTACW 1 cut(s) 90
TfiI GAWTC 3 cut(s) 7, 277, 416
Tru1I TTAA 6 cut(s) 161, 240, 317, 470, 488, 522
Tru9I TTAA 6 cut(s) 161, 240, 317, 470, 488, 522
TscAI CASTG 2 cut(s) 646, 1138
TseFI GTSAC 2 cut(s) 641, 1107
TseI GCWGC 4 cut(s) 770, 849, 852, 986
Tsp45I GTSAC 2 cut(s) 641, 1107
TspDTI ATGAA 4 cut(s) 161, 683, 704, 833
TspGWI ACGGA 1 cut(s) 277
TspRI CASTG 2 cut(s) 646, 1138
VpaK11BI GGWCC 2 cut(s) 44, 506
XapI RAATTY 3 cut(s) 149, 973, 992
XceI RCATGY 2 cut(s) 764, 1126
XspI CTAG 2 cut(s) 558, 807
ZrmI AGTACT 1 cut(s) 92
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.