Domain of unknown function (DUF4283)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Exo_endo_phos | PF03372 | 6 - 191 | 6.5e-14 | Endonuclease/Exonuclease/phosphatase family |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 524 |
| AciI | CCGC | 3 cut(s) | 301, 524, 594 |
| AclWI | GGATC | 1 cut(s) | 363 |
| AcoI | YGGCCR | 1 cut(s) | 319 |
| AdeI | CACNNNGTG | 1 cut(s) | 94 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 151 |
| AgsI | TTSAA | 3 cut(s) | 103, 415, 465 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 526, 558 |
| AluBI | AGCT | 1 cut(s) | 194 |
| AluI | AGCT | 1 cut(s) | 194 |
| Alw26I | GTCTC | 1 cut(s) | 328 |
| AlwI | GGATC | 1 cut(s) | 363 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 236, 493 |
| AoxI | GGCC | 1 cut(s) | 319 |
| AspLEI | GCGC | 1 cut(s) | 58 |
| AspS9I | GGNCC | 1 cut(s) | 622 |
| AsuHPI | GGTGA | 1 cut(s) | 304 |
| AvaII | GGWCC | 1 cut(s) | 622 |
| BalI | TGGCCA | 1 cut(s) | 321 |
| BccI | CCATC | 1 cut(s) | 330 |
| BcoDI | GTCTC | 1 cut(s) | 328 |
| BfaI | CTAG | 2 cut(s) | 555, 639 |
| Bme18I | GGWCC | 1 cut(s) | 622 |
| BmgT120I | GGNCC | 1 cut(s) | 622 |
| BmrI | ACTGGG | 1 cut(s) | 440 |
| BmuI | ACTGGG | 1 cut(s) | 440 |
| BpmI | CTGGAG | 2 cut(s) | 216, 426 |
| BpuEI | CTTGAG | 1 cut(s) | 44 |
| BsaBI | GATNNNNATC | 1 cut(s) | 68 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 151 |
| Bse1I | ACTGG | 3 cut(s) | 133, 435, 672 |
| Bse3DI | GCAATG | 1 cut(s) | 112 |
| Bse8I | GATNNNNATC | 1 cut(s) | 68 |
| BseGI | GGATG | 3 cut(s) | 69, 277, 322 |
| BseJI | GATNNNNATC | 1 cut(s) | 68 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 151 |
| BseMI | GCAATG | 1 cut(s) | 112 |
| BseMII | CTCAG | 2 cut(s) | 243, 279 |
| BseNI | ACTGG | 3 cut(s) | 133, 435, 672 |
| BshFI | GGCC | 1 cut(s) | 321 |
| BslFI | GGGAC | 2 cut(s) | 121, 168 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 151 |
| BsmAI | GTCTC | 1 cut(s) | 328 |
| BsmFI | GGGAC | 2 cut(s) | 121, 168 |
| BsmI | GAATGC | 2 cut(s) | 459, 481 |
| BsnI | GGCC | 1 cut(s) | 321 |
| Bsp143I | GATC | 4 cut(s) | 146, 178, 225, 355 |
| BspACI | CCGC | 3 cut(s) | 301, 524, 594 |
| BspANI | GGCC | 1 cut(s) | 321 |
| BspCNI | CTCAG | 2 cut(s) | 242, 280 |
| BspPI | GGATC | 1 cut(s) | 363 |
| BsrBI | CCGCTC | 1 cut(s) | 524 |
| BsrDI | GCAATG | 1 cut(s) | 112 |
| BsrI | ACTGG | 3 cut(s) | 133, 435, 672 |
| BssMI | GATC | 4 cut(s) | 146, 178, 225, 355 |
| BstC8I | GCNNGC | 1 cut(s) | 204 |
| BstDEI | CTNAG | 2 cut(s) | 229, 288 |
| BstF5I | GGATG | 3 cut(s) | 69, 277, 322 |
| BstHHI | GCGC | 1 cut(s) | 58 |
| BstKTI | GATC | 4 cut(s) | 149, 181, 228, 358 |
| BstMAI | GTCTC | 1 cut(s) | 328 |
| BstMBI | GATC | 4 cut(s) | 146, 178, 225, 355 |
| BstX2I | RGATCY | 1 cut(s) | 355 |
| BstYI | RGATCY | 1 cut(s) | 355 |
| BsuRI | GGCC | 1 cut(s) | 321 |
| BtsCI | GGATG | 3 cut(s) | 69, 277, 322 |
| BtsIMutI | CAGTG | 1 cut(s) | 156 |
| Cac8I | GCNNGC | 1 cut(s) | 204 |
| CaiI | CAGNNNCTG | 2 cut(s) | 236, 493 |
| CfoI | GCGC | 1 cut(s) | 58 |
| Cfr13I | GGNCC | 1 cut(s) | 622 |
| CviAII | CATG | 1 cut(s) | 53 |
| CviJI | RGCY | 5 cut(s) | 194, 202, 206, 321, 491 |
| CviKI_1 | RGCY | 5 cut(s) | 194, 202, 206, 321, 491 |
| DdeI | CTNAG | 2 cut(s) | 229, 288 |
| DpnI | GATC | 4 cut(s) | 148, 180, 227, 357 |
| DpnII | GATC | 4 cut(s) | 146, 178, 225, 355 |
| DraIII | CACNNNGTG | 1 cut(s) | 94 |
| EaeI | YGGCCR | 1 cut(s) | 319 |
| Eco47I | GGWCC | 1 cut(s) | 622 |
| FaeI | CATG | 1 cut(s) | 56 |
| FaiI | YATR | 9 cut(s) | 16, 54, 165, 216, 261, 318, 345, 518, 654 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 526, 558 |
| FaqI | GGGAC | 2 cut(s) | 121, 168 |
| FatI | CATG | 1 cut(s) | 52 |
| FauI | CCCGC | 1 cut(s) | 601 |
| FokI | GGATG | 3 cut(s) | 56, 284, 309 |
| FspBI | CTAG | 2 cut(s) | 555, 639 |
| GlaI | GCGC | 1 cut(s) | 57 |
| GsuI | CTGGAG | 2 cut(s) | 216, 426 |
| HaeIII | GGCC | 1 cut(s) | 321 |
| HhaI | GCGC | 1 cut(s) | 58 |
| Hin1II | CATG | 1 cut(s) | 56 |
| Hin6I | GCGC | 1 cut(s) | 56 |
| HinP1I | GCGC | 1 cut(s) | 56 |
| HincII | GTYRAC | 1 cut(s) | 250 |
| HindII | GTYRAC | 1 cut(s) | 250 |
| HinfI | GANTC | 5 cut(s) | 64, 156, 221, 281, 551 |
| HpaI | GTTAAC | 1 cut(s) | 250 |
| HphI | GGTGA | 1 cut(s) | 304 |
| Hpy166II | GTNNAC | 4 cut(s) | 88, 250, 306, 540 |
| Hpy188I | TCNGA | 2 cut(s) | 289, 607 |
| Hpy188III | TCNNGA | 4 cut(s) | 10, 61, 73, 326 |
| Hpy8I | GTNNAC | 4 cut(s) | 88, 250, 306, 540 |
| HpyAV | CCTTC | 3 cut(s) | 149, 271, 528 |
| HpyCH4V | TGCA | 3 cut(s) | 117, 504, 512 |
| HpyF3I | CTNAG | 2 cut(s) | 229, 288 |
| Hsp92II | CATG | 1 cut(s) | 56 |
| HspAI | GCGC | 1 cut(s) | 56 |
| KspAI | GTTAAC | 1 cut(s) | 250 |
| Kzo9I | GATC | 4 cut(s) | 146, 178, 225, 355 |
| LmnI | GCTCC | 2 cut(s) | 521, 546 |
| MaeI | CTAG | 2 cut(s) | 555, 639 |
| MalI | GATC | 4 cut(s) | 148, 180, 227, 357 |
| MbiI | CCGCTC | 1 cut(s) | 524 |
| MboI | GATC | 4 cut(s) | 146, 178, 225, 355 |
| MflI | RGATCY | 1 cut(s) | 355 |
| MlsI | TGGCCA | 1 cut(s) | 321 |
| MluCI | AATT | 2 cut(s) | 19, 173 |
| MluNI | TGGCCA | 1 cut(s) | 321 |
| MlyI | GAGTC | 2 cut(s) | 150, 215 |
| MnlI | CCTC | 4 cut(s) | 191, 283, 524, 645 |
| Mox20I | TGGCCA | 1 cut(s) | 321 |
| MscI | TGGCCA | 1 cut(s) | 321 |
| MseI | TTAA | 2 cut(s) | 249, 627 |
| Msp20I | TGGCCA | 1 cut(s) | 321 |
| Mva1269I | GAATGC | 2 cut(s) | 459, 481 |
| NdeII | GATC | 4 cut(s) | 146, 178, 225, 355 |
| NlaIII | CATG | 1 cut(s) | 56 |
| PctI | GAATGC | 2 cut(s) | 459, 481 |
| PfeI | GAWTC | 3 cut(s) | 64, 281, 551 |
| PleI | GAGTC | 2 cut(s) | 150, 215 |
| PpsI | GAGTC | 2 cut(s) | 150, 215 |
| PspPI | GGNCC | 1 cut(s) | 622 |
| PstNI | CAGNNNCTG | 2 cut(s) | 236, 493 |
| PsuI | RGATCY | 1 cut(s) | 355 |
| SaqAI | TTAA | 2 cut(s) | 249, 627 |
| Sau3AI | GATC | 4 cut(s) | 146, 178, 225, 355 |
| Sau96I | GGNCC | 1 cut(s) | 622 |
| SchI | GAGTC | 2 cut(s) | 150, 215 |
| SetI | ASST | 5 cut(s) | 196, 294, 510, 539, 647 |
| SinI | GGWCC | 1 cut(s) | 622 |
| SmlI | CTYRAG | 1 cut(s) | 59 |
| SmoI | CTYRAG | 1 cut(s) | 59 |
| Sse9I | AATT | 2 cut(s) | 19, 173 |
| SsiI | CCGC | 3 cut(s) | 301, 524, 594 |
| SspMI | CTAG | 2 cut(s) | 555, 639 |
| TaqI | TCGA | 2 cut(s) | 224, 426 |
| TaqII | GACCGA | 1 cut(s) | 610 |
| TasI | AATT | 2 cut(s) | 19, 173 |
| TfiI | GAWTC | 3 cut(s) | 64, 281, 551 |
| Tru1I | TTAA | 2 cut(s) | 249, 627 |
| Tru9I | TTAA | 2 cut(s) | 249, 627 |
| TscAI | CASTG | 1 cut(s) | 156 |
| TspDTI | ATGAA | 2 cut(s) | 17, 488 |
| TspRI | CASTG | 1 cut(s) | 156 |
| VpaK11BI | GGWCC | 1 cut(s) | 622 |
| XspI | CTAG | 2 cut(s) | 555, 639 |