Rorug02G0341700

acid phosphatase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000041
Physical Location & Seq
Reverse (-)
42536181 .. 42537910
1730 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0341700.1

Sequence Viewer

Length: 1353 bp
ATGGGTGGCCACCAATCCAAAGCACACAAAACACAGCTCTCAGTCTCTGAACCAAAACCAGCCATGGATACCACCACCCAGACCCAAAGCACTGATTCCACTATTGAACCAGGGCCAGCATGGTCAGCTCTCCTCGGCGAGAACAACTGGGCCGGCCTCCTGGACCCGCTGGACCTTCACCTCCGAACCCTGATCCTCCGGTGCGGCGACTTCTGCCAGGGGACCTACGACGCCTTCAACAACGACGCCAACTCCAAGTACGCCGGGTCCAGCCGCTACGGCAAAGCCTCCTTCTTCGACAAAGTGATGCTCCAAGACGCCGCCAACTACGAAATCGCCTCCTTCCTCTACGCCACCGCACTCGTCAGCGTCCCAGAGGCCTTCCTCCTCCACTCCATGTCCCGCGAGTCGTGGGACCGCGAGTCCAACTGGATCGGCTACATCGCCGTCACCACCGACGAGTACAGCAAGTCCATCGGCCGCCGCGAAATCTACGTCGCCTGGCGGGGCACCACCCGTAACTACGAGTGGGTTAATGTGCTGGGCGCCGAGCTTGAATCCGCGGCGCCGCTGCTCAAACCGAACACAGTAAACAATGAGCTCAAACGTGGTGATGGTGGCACTAGTAGCAGTGACGAGGAAGAAGATGATGAAAATGCTAAGGTACCCAAAGTCATGAGAGGCTGGCTGTCCATGTACATCTCCGACGACCCGAAATCGGCCTTCACCAAATCCAGCGCCAGAGTTCAGCTGGTCACCAAAATCAACGAGCTGAGGGAGAAGTACAAAGGTGAGAAGCTGAGCATAGCGCTGACCGGGCACAGTCTCGGTGCCAGCCTGTCAGTCGTCAGCGCTTTTGACCTGGTGGAGAACGGAATCTCGGATATTCCGGTGGCGGCTTTCGTCTTCGGCTGTCCACAAGTCGGAAACAAGGCCTTCAAGACCAGGATAGGCCAGCACCCGAATCTGAAGATTATGCACATAAGGAACGAGATCGATCTGATTCCACACTACCCGGGAAGGGCTCTGGGGTATCGTTATATAGGGACCGAAGTGGAGATCGACACGAGGAAGTCGCCGTATTTGAAGGACTCGAAGGACCCGTCGGACTGGCACAACTTGCAGGCGATGCTGCATATAGTGGCGGGGTGGAATGGGGAGAAAGGTGAGTTCGAGCTCAAGGTGAAGAGGAGTGTGGCTTTGGTGAACAAGTCGTGTGATTTTCTCAAGACGGAGTGTTCGGTGCCGGCGTTGTGGTGGGTTGAGAAGAACAAAGGGATGGTGCGGGATGAAAATGGAGAATGGGCTCTGGCTCCGCCGGCGGATGAGGACCTACCAGTCCCGGAATATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2 DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

450

Amino Acids

50.08

Weight (kDa)

5.51

Isoelectric Point (pI)

40.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_3 PF01764 165 - 341 8.8e-28 Lipase (class 3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01050
fragaria_vesca FvH4_1g24181 FvH4_1g28741 FvH4_1g29781 FvH4_2g00621 FvH4_2g04885 FvH4_2g11953 FvH4_2g11954 FvH4_2g12001 FvH4_2g12002 FvH4_2g12222 FvH4_2g12223 FvH4_2g38351 FvH4_3g04401 FvH4_3g31330 FvH4_3g33091 FvH4_4g11461 FvH4_5g27993 FvH4_5g27994 FvH4_5g28072 FvH4_5g28231 FvH4_5g28591 FvH4_5g34261 FvH4_6g18162 FvH4_6g25500 FvH4_6g25561 FvH4_6g25792 FvH4_6g27602 FvH4_6g46881
malus_domestica MD03G1019700.v1.1
prunus_persica Prupe.1G055400_v2.0.a1 Prupe.1G179200_v2.0.a1 Prupe.1G208200_v2.0.a1 Prupe.1G231200_v2.0.a1 Prupe.2G044900_v2.0.a1 Prupe.2G055100_v2.0.a1 Prupe.2G097600_v2.0.a1 Prupe.2G114200_v2.0.a1 Prupe.3G109000_v2.0.a1 Prupe.3G109300_v2.0.a1 Prupe.3G109600_v2.0.a1 Prupe.4G246900_v2.0.a1 Prupe.5G026400_v2.0.a1
pyrus_communis pycom05g17130 pycom07g06820 pycom07g18590 pycom07g22730 pycom12401g00120 pycom12401g00180 pycom420g00470
rosa_chinensis RchiOBHm_Chr1g0342591 RchiOBHm_Chr1g0342601 RchiOBHm_Chr1g0342611 RchiOBHm_Chr1g0351011 RchiOBHm_Chr2g0146151 RchiOBHm_Chr2g0171821 RchiOBHm_Chr3g0492921 RchiOBHm_Chr3g0492931 RchiOBHm_Chr4g0406871 RchiOBHm_Chr4g0426311 RchiOBHm_Chr5g0020721 RchiOBHm_Chr5g0050111 RchiOBHm_Chr5g0051681 RchiOBHm_Chr5g0053531 RchiOBHm_Chr5g0054841 RchiOBHm_Chr5g0055061 RchiOBHm_Chr5g0055071 RchiOBHm_Chr6g0248911 RchiOBHm_Chr6g0291741 RchiOBHm_Chr7g0187781 RchiOBHm_Chr7g0220081 RchiOBHm_Chr7g0224391 RchiOBHm_Chr7g0235221
rosa_laevigata RLG00000002133 RLG00000002402 RLG00000002736 RLG00000011046 RLG00000013214 RLG00000016550 RLG00000021669 RLG00000022948 RLG00000023691 RLG00000024682 RLG00000027826 RLG00000029734 RLG00000029831 RLG00000030305 RLG00000037042
rosa_multiflora Rmu_co7992532.1_g000001 Rmu_co8021462.1_g000001 Rmu_co8229237.1_g000001 Rmu_co8281571.1_g000001 Rmu_co8326451.1_g000001 Rmu_co8359553.1_g000001 Rmu_co8372117.1_g000001 Rmu_co8427177.1_g000001 Rmu_co8474063.1_g000002 Rmu_sc0000007.1_g000020 Rmu_sc0000173.1_g000002 Rmu_sc0000367.1_g000086 Rmu_sc0000367.1_g000088 Rmu_sc0000559.1_g000002 Rmu_sc0000733.1_g000014 Rmu_sc0000745.1_g000006 Rmu_sc0000791.1_g000046 Rmu_sc0000791.1_g000049 Rmu_sc0000824.1_g000010 Rmu_sc0000824.1_g000011 Rmu_sc0000834.1_g000009 Rmu_sc0000834.1_g000011 Rmu_sc0000911.1_g000020 Rmu_sc0000935.1_g000034 Rmu_sc0000935.1_g000051 Rmu_sc0000935.1_g000053 Rmu_sc0001000.1_g000005 Rmu_sc0001000.1_g000006 Rmu_sc0001150.1_g000004 Rmu_sc0001227.1_g000002 Rmu_sc0001322.1_g000018 Rmu_sc0001343.1_g000001 Rmu_sc0001356.1_g000004 Rmu_sc0001356.1_g000005 Rmu_sc0001363.1_g000007 Rmu_sc0001463.1_g000012 Rmu_sc0001484.1_g000023 Rmu_sc0001516.1_g000003 Rmu_sc0001516.1_g000005 Rmu_sc0001619.1_g000005 Rmu_sc0001648.1_g000032 Rmu_sc0001648.1_g000035 Rmu_sc0001694.1_g000008 Rmu_sc0001809.1_g000023 Rmu_sc0002093.1_g000027 Rmu_sc0002231.1_g000004 Rmu_sc0002245.1_g000001 Rmu_sc0002245.1_g000003 Rmu_sc0002354.1_g000045 Rmu_sc0002354.1_g000048 Rmu_sc0002368.1_g000014 Rmu_sc0002368.1_g000016 Rmu_sc0002368.1_g000017 Rmu_sc0002401.1_g000030 Rmu_sc0002487.1_g000012 Rmu_sc0002798.1_g000028 Rmu_sc0002923.1_g000012 Rmu_sc0002960.1_g000002 Rmu_sc0003033.1_g000072 Rmu_sc0003133.1_g000015 Rmu_sc0003168.1_g000007 Rmu_sc0003945.1_g000002 Rmu_sc0003945.1_g000004 Rmu_sc0003945.1_g000005 Rmu_sc0003979.1_g000004 Rmu_sc0004005.1_g000007 Rmu_sc0004059.1_g000018 Rmu_sc0004064.1_g000001 Rmu_sc0004083.1_g000007 Rmu_sc0004083.1_g000008 Rmu_sc0004354.1_g000033 Rmu_sc0004368.1_g000035 Rmu_sc0004483.1_g000032 Rmu_sc0004646.1_g000012 Rmu_sc0005014.1_g000006 Rmu_sc0005016.1_g000046 Rmu_sc0005016.1_g000051 Rmu_sc0005033.1_g000005 Rmu_sc0005033.1_g000007 Rmu_sc0005065.1_g000002 Rmu_sc0005065.1_g000004 Rmu_sc0005168.1_g000012 Rmu_sc0005238.1_g000001 Rmu_sc0005365.1_g000012 Rmu_sc0005631.1_g000005 Rmu_sc0005704.1_g000013 Rmu_sc0005704.1_g000014 Rmu_sc0005781.1_g000030 Rmu_sc0005789.1_g000016 Rmu_sc0006185.1_g000001 Rmu_sc0006185.1_g000002 Rmu_sc0006266.1_g000044 Rmu_sc0006561.1_g000018 Rmu_sc0006695.1_g000016 Rmu_sc0007739.1_g000022 Rmu_sc0008050.1_g000013 Rmu_sc0008169.1_g000006 Rmu_sc0008855.1_g000006 Rmu_sc0009298.1_g000002 Rmu_sc0009495.1_g000005 Rmu_sc0010608.1_g000003 Rmu_sc0010958.1_g000005 Rmu_sc0011506.1_g000001 Rmu_sc0011790.1_g000002 Rmu_sc0011790.1_g000003 Rmu_sc0012042.1_g000004 Rmu_sc0012042.1_g000005 Rmu_sc0012140.1_g000020 Rmu_sc0012726.1_g000005 Rmu_sc0012746.1_g000023 Rmu_sc0013193.1_g000002 Rmu_sc0013193.1_g000003 Rmu_sc0017997.1_g000001 Rmu_sc0021401.1_g000001 Rmu_sc0025959.1_g000001 Rmu_sc0026403.1_g000003 Rmu_sc0028616.1_g000002 Rmu_sc0029801.1_g000002 Rmu_sc0032453.1_g000001 Rmu_sc0033672.1_g000002 Rmu_sc0034553.1_g000001 Rmu_sc0036883.1_g000001 Rmu_ssc0000096.1_g000001 Rmu_ssc0000158.1_g000031 Rmu_ssc0000291.1_g000034 Rmu_ssc0000381.1_g000026 Rmu_ssc0000387.1_g000010 Rmu_ssc0000474.1_g000002 Rmu_ssc0000474.1_g000004
rosa_roxburghii Rroxscaffold_1G00020090 Rroxscaffold_1G00020100 Rroxscaffold_1G00022940 Rroxscaffold_1G00044600 Rroxscaffold_1G00054420 Rroxscaffold_1G00054430 Rroxscaffold_1G00056440 Rroxscaffold_2G00090180 Rroxscaffold_2G00101250 Rroxscaffold_2G00110600 Rroxscaffold_2G00152800 Rroxscaffold_4G00320370 Rroxscaffold_4G00320640 Rroxscaffold_4G00322420 Rroxscaffold_4G00324670 Rroxscaffold_5G00332760 Rroxscaffold_5G00345010 Rroxscaffold_5G00345020 Rroxscaffold_5G00355470 Rroxscaffold_5G00385520 Rroxscaffold_6G00394610 Rroxscaffold_6G00394700 Rroxscaffold_7G00164190 Rroxscaffold_7G00182750 Rroxscaffold_7G00183540 Rroxscaffold_7G00203520 Rroxscaffold_7G00211630
rosa_rugosa Rorug01G0041400 Rorug01G0041500 Rorug01G0065300 Rorug01G0065300 Rorug01G0069700 Rorug01G0069800 Rorug01G0070300 Rorug01G0072300 Rorug01G0072900 Rorug01G0093100 Rorug01G0147100.1 Rorug01G0196900 Rorug01G0259700 Rorug02G0162000 Rorug02G0182700 Rorug02G0212300 Rorug02G0214700 Rorug02G0229900 Rorug02G0246100 Rorug02G0257400 Rorug02G0259100 Rorug02G0341400 Rorug02G0341500 Rorug02G0341700 Rorug02G0341800 Rorug02G0355600 Rorug02G0386100 Rorug02G0386100 Rorug02G0387000 Rorug02G0387100 Rorug02G0388400 Rorug02G0388500 Rorug02G0429100 Rorug02G0429100 Rorug02G0455300 Rorug02G0634400 Rorug03G0163200 Rorug03G0198500 Rorug03G0199600 Rorug03G0204000 Rorug03G0265600 Rorug03G0266100 Rorug03G0266200 Rorug03G0280600 Rorug03G0348200 Rorug03G0349700 Rorug03G0349800 Rorug04G0020200 Rorug04G0073700 Rorug04G0215000 Rorug04G0426100 Rorug05G0064200 Rorug05G0064300 Rorug05G0265700 Rorug05G0287400 Rorug05G0287500 Rorug05G0287500 Rorug05G0405000 Rorug05G0525700 Rorug05G0525800 Rorug05G0588200 Rorug06G0038200 Rorug06G0057900 Rorug06G0058000 Rorug06G0058500 Rorug06G0058600 Rorug06G0116700 Rorug06G0159300.1 Rorug06G0159400 Rorug06G0174700 Rorug06G0375500 Rorug07G0091400 Rorug07G0094900 Rorug07G0108100 Rorug07G0140700 Rorug07G0140700 Rorug07G0207100 Rorug07G0207100 Rorug07G0207200 Rorug07G0287300
rosa_samantha Rh1AG100100 Rh1AG104500 Rh1BG150700 Rh1BG237700 Rh1BG334000 Rh1CG090000 Rh1CG100100 Rh1CG347300 Rh1DG090500 Rh1DG096100 Rh1DG107400 Rh1DG182500 Rh1DG265700 Rh1DG365200 Rh2BG256800 Rh2BG361300 Rh2BG468600 Rh2BG549800 Rh2CG270900 Rh2DG276700 Rh2DG276800 Rh2DG377700 Rh2DG477900 Rh3AG161200 Rh3BG138800 Rh3BG185700 Rh3BG269600 Rh3CG176000 Rh4AG006100 Rh4AG216700 Rh4AG355800 Rh4CG108600 Rh5AG141700 Rh5AG480000 Rh5BG014500 Rh5BG134600 Rh5BG295400 Rh5BG552900 Rh5CG058600 Rh5CG286400 Rh5CG350900 Rh5CG575800 Rh5DG004300 Rh5DG254600 Rh5DG356500 Rh6AG106500 Rh6AG191100 Rh6AG224700 Rh6BG074700 Rh6BG181400 Rh6BG352200 Rh6BG408400 Rh6BG453600 Rh6CG047400 Rh6CG172200 Rh6CG189400 Rh6CG515800 Rh6DG042900 Rh6DG163400 Rh7AG089300 Rh7AG227400 Rh7AG275600 Rh7AG375100 Rh7AG460900 Rh7AG485200 Rh7BG146100 Rh7BG354300 Rh7CG077100 Rh7CG294500 Rh7CG393800 Rh7DG041700 Rh7DG062700 Rh7DG091700 Rh7DG178900 Rh7DG192300 Rh7DG297000 Rh7DG403600 Rh7DG411800
rosa_wichuraiana Rw0G007100 Rw0G011430 Rw1G003580 Rw1G004040 Rw1G005880 Rw1G009860 Rw1G009990 Rw1G012190 Rw1G012200 Rw1G013740 Rw1G013750 Rw1G016710 Rw1G021050 Rw2G023790 Rw2G028810 Rw2G035890 Rw2G036250 Rw4G008880 Rw4G014380 Rw4G014390 Rw4G016020 Rw4G037160 Rw5G010060 Rw5G030620 Rw5G033840 Rw5G049840 Rw5G049850 Rw6G003450 Rw6G015080 Rw7G019640 Rw7G024060 Rw7G024070 Rw7G029090 Rw7G037010 Rw7G039170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1337
Acc65I GGTACC 1 cut(s) 664
AccB1I GGYRCC 6 cut(s) 509, 545, 565, 664, 830, 1243
AccII CGCG 4 cut(s) 405, 420, 486, 563
AclWI GGATC 2 cut(s) 187, 440
AcoI YGGCCR 2 cut(s) 7, 478
AcuI CTGAAG 1 cut(s) 989
AcyI GRCGYC 5 cut(s) 231, 246, 318, 546, 566
AfaI GTAC 5 cut(s) 260, 464, 666, 698, 785
AfeI AGCGCT 2 cut(s) 810, 853
AfiI CCNNNNNNNGG 3 cut(s) 718, 923, 1021
AgsI TTSAA 5 cut(s) 107, 238, 557, 940, 1087
AhdI GACNNNNNGTC 1 cut(s) 421
AhlI ACTAGT 1 cut(s) 623
AjnI CCWGG 6 cut(s) 109, 159, 216, 500, 861, 944
AluBI AGCT 8 cut(s) 37, 128, 553, 601, 751, 772, 799, 1177
AluI AGCT 8 cut(s) 37, 128, 553, 601, 751, 772, 799, 1177
Alw21I GWGCWC 2 cut(s) 603, 1179
Alw26I GTCTC 2 cut(s) 49, 830
AlwI GGATC 2 cut(s) 187, 440
AlwNI CAGNNNCTG 1 cut(s) 47
Ama87I CYCGRG 1 cut(s) 1015
Aor51HI AGCGCT 2 cut(s) 810, 853
AoxI GGCC 9 cut(s) 7, 113, 150, 154, 378, 478, 720, 933, 952
ApeKI GCWGC 2 cut(s) 571, 1132
ArsI GACNNNNNNTTYG 6 cut(s) 480, 512, 1088, 1120, 1222, 1254
Asp718I GGTACC 1 cut(s) 664
AspLEI GCGC 5 cut(s) 548, 568, 740, 811, 854
AsuC2I CCSGG 5 cut(s) 265, 817, 1016, 1017, 1343
AsuHPI GGTGA 9 cut(s) 170, 442, 623, 718, 748, 803, 1178, 1195, 1216
AvaI CYCGRG 1 cut(s) 1015
AvaII GGWCC 8 cut(s) 163, 172, 222, 267, 415, 1047, 1099, 1330
BaeGI GKGCMC 2 cut(s) 512, 822
BalI TGGCCA 1 cut(s) 9
BanI GGYRCC 6 cut(s) 509, 545, 565, 664, 830, 1243
BanII GRGCYC 4 cut(s) 603, 1027, 1179, 1309
BauI CACGAG 1 cut(s) 1066
BbsI GAAGAC 1 cut(s) 898
Bbv12I GWGCWC 2 cut(s) 603, 1179
BbvCI CCTCAGC 1 cut(s) 773
BbvI GCAGC 2 cut(s) 558, 1119
BccI CCATC 3 cut(s) 482, 608, 1273
BceAI ACGGC 3 cut(s) 295, 431, 1063
BcgI CGANNNNNNTGC 2 cut(s) 457, 491
BciT130I CCWGG 6 cut(s) 111, 161, 218, 502, 863, 946
BciVI GTATCC 1 cut(s) 61
BcnI CCSGG 5 cut(s) 265, 817, 1016, 1017, 1343
BcoDI GTCTC 2 cut(s) 49, 830
BcuI ACTAGT 1 cut(s) 623
BfaI CTAG 1 cut(s) 624
BfoI RGCGCY 5 cut(s) 549, 569, 741, 812, 855
BfuI GTATCC 1 cut(s) 61
BglI GCCNNNNNGGC 1 cut(s) 279
BlpI GCTNAGC 1 cut(s) 800
Bme18I GGWCC 8 cut(s) 163, 172, 222, 267, 415, 1047, 1099, 1330
BmeRI GACNNNNNGTC 1 cut(s) 421
BmeT110I CYCGRG 1 cut(s) 1015
BmrI ACTGGG 1 cut(s) 157
BmsI GCATC 2 cut(s) 297, 1119
BmuI ACTGGG 1 cut(s) 157
BpiI GAAGAC 1 cut(s) 898
Bpu10I CCTNAGC 2 cut(s) 660, 773
Bpu1102I GCTNAGC 1 cut(s) 800
BpuEI CTTGAG 2 cut(s) 1163, 1211
BpuMI CCSGG 5 cut(s) 265, 817, 1016, 1017, 1343
Bsa29I ATCGAT 1 cut(s) 996
BsaHI GRCGYC 5 cut(s) 231, 246, 318, 546, 566
BsaJI CCNNGG 6 cut(s) 63, 110, 133, 217, 561, 1015
BsaWI WCCGGW 2 cut(s) 198, 889
BsaXI ACNNNNNCTCC 2 cut(s) 236, 266
Bsc4I CCNNNNNNNGG 3 cut(s) 718, 923, 1021
Bse118I RCCGGY 3 cut(s) 152, 1246, 1318
Bse1I ACTGG 4 cut(s) 152, 434, 1115, 1337
BseBI CCWGG 6 cut(s) 111, 161, 218, 502, 863, 946
BseCI ATCGAT 1 cut(s) 996
BseDI CCNNGG 6 cut(s) 63, 110, 133, 217, 561, 1015
BseGI GGATG 3 cut(s) 1284, 1294, 1330
BseLI CCNNNNNNNGG 3 cut(s) 718, 923, 1021
BseMII CTCAG 3 cut(s) 54, 764, 791
BseNI ACTGG 4 cut(s) 152, 434, 1115, 1337
BseRI GAGGAG 3 cut(s) 122, 377, 1204
BseSI GKGCMC 2 cut(s) 512, 822
BseX3I CGGCCG 1 cut(s) 478
BseXI GCAGC 2 cut(s) 558, 1119
BseYI CCCAGC 1 cut(s) 541
Bsh1236I CGCG 4 cut(s) 405, 420, 486, 563
Bsh1285I CGRYCG 1 cut(s) 481
BshFI GGCC 9 cut(s) 9, 115, 152, 156, 380, 480, 722, 935, 954
BshNI GGYRCC 6 cut(s) 509, 545, 565, 664, 830, 1243
BshVI ATCGAT 1 cut(s) 996
BsiEI CGRYCG 1 cut(s) 481
BsiHKAI GWGCWC 2 cut(s) 603, 1179
BsiHKCI CYCGRG 1 cut(s) 1015
BsiSI CCGG 9 cut(s) 153, 199, 264, 816, 890, 1016, 1247, 1319, 1343
BslFI GGGAC 6 cut(s) 235, 356, 385, 428, 1060, 1325
BslI CCNNNNNNNGG 3 cut(s) 718, 923, 1021
BsmAI GTCTC 2 cut(s) 49, 830
BsmFI GGGAC 6 cut(s) 235, 356, 385, 428, 1060, 1325
BsnI GGCC 9 cut(s) 9, 115, 152, 156, 380, 480, 722, 935, 954
BsoBI CYCGRG 1 cut(s) 1015
Bsp1286I GDGCHC 6 cut(s) 512, 603, 822, 1027, 1179, 1309
Bsp1407I TGTACA 1 cut(s) 696
Bsp143I GATC 5 cut(s) 192, 432, 993, 997, 1059
Bsp1720I GCTNAGC 1 cut(s) 800
Bsp19I CCATGG 1 cut(s) 63
BspANI GGCC 9 cut(s) 9, 115, 152, 156, 380, 480, 722, 935, 954
BspCNI CTCAG 3 cut(s) 53, 765, 792
BspDI ATCGAT 1 cut(s) 996
BspFNI CGCG 4 cut(s) 405, 420, 486, 563
BspHI TCATGA 1 cut(s) 675
BspPI GGATC 2 cut(s) 187, 440
BspT107I GGYRCC 6 cut(s) 509, 545, 565, 664, 830, 1243
BsrFI RCCGGY 3 cut(s) 152, 1246, 1318
BsrGI TGTACA 1 cut(s) 696
BsrI ACTGG 4 cut(s) 152, 434, 1115, 1337
BssAI RCCGGY 3 cut(s) 152, 1246, 1318
BssECI CCNNGG 6 cut(s) 63, 110, 133, 217, 561, 1015
BssMI GATC 5 cut(s) 192, 432, 993, 997, 1059
BssNI GRCGYC 5 cut(s) 231, 246, 318, 546, 566
BssSI CACGAG 1 cut(s) 1066
BssT1I CCWWGG 1 cut(s) 63
Bst2BI CACGAG 1 cut(s) 1066
Bst2UI CCWGG 6 cut(s) 111, 161, 218, 502, 863, 946
Bst4CI ACNGT 2 cut(s) 589, 824
Bst6I CTCTTC 1 cut(s) 1181
BstACI GRCGYC 5 cut(s) 231, 246, 318, 546, 566
BstAPI GCANNNNNTGC 2 cut(s) 1120, 1129
BstAUI TGTACA 1 cut(s) 696
BstC8I GCNNGC 8 cut(s) 117, 154, 686, 835, 956, 1125, 1248, 1320
BstDEI CTNAG 4 cut(s) 40, 660, 773, 800
BstDSI CCRYGG 2 cut(s) 63, 561
BstEII GGTNACC 1 cut(s) 754
BstF5I GGATG 3 cut(s) 1284, 1294, 1330
BstFNI CGCG 4 cut(s) 405, 420, 486, 563
BstH2I RGCGCY 5 cut(s) 549, 569, 741, 812, 855
BstHHI GCGC 5 cut(s) 548, 568, 740, 811, 854
BstKTI GATC 5 cut(s) 195, 435, 996, 1000, 1062
BstMAI GTCTC 2 cut(s) 49, 830
BstMBI GATC 5 cut(s) 192, 432, 993, 997, 1059
BstMCI CGRYCG 1 cut(s) 481
BstMWI GCNNNNNNNGC 8 cut(s) 125, 213, 279, 627, 817, 1120, 1129, 1319
BstNI CCWGG 6 cut(s) 111, 161, 218, 502, 863, 946
BstPI GGTNACC 1 cut(s) 754
BstSLI GKGCMC 2 cut(s) 512, 822
BstUI CGCG 4 cut(s) 405, 420, 486, 563
BstV1I GCAGC 2 cut(s) 558, 1119
BstV2I GAAGAC 1 cut(s) 898
BstZI CGGCCG 1 cut(s) 478
Bsu15I ATCGAT 1 cut(s) 996
BsuI GTATCC 1 cut(s) 61
BsuRI GGCC 9 cut(s) 9, 115, 152, 156, 380, 480, 722, 935, 954
BsuTUI ATCGAT 1 cut(s) 996
BtgI CCRYGG 2 cut(s) 63, 561
BtgZI GCGATG 2 cut(s) 427, 1142
BtsCI GGATG 3 cut(s) 1284, 1294, 1330
BtsI GCAGTG 1 cut(s) 637
BtsIMutI CAGTG 2 cut(s) 90, 637
Cac8I GCNNGC 8 cut(s) 117, 154, 686, 835, 956, 1125, 1248, 1320
CaiI CAGNNNCTG 1 cut(s) 47
CciI TCATGA 1 cut(s) 675
CfoI GCGC 5 cut(s) 548, 568, 740, 811, 854
Cfr10I RCCGGY 3 cut(s) 152, 1246, 1318
Cfr42I CCGCGG 1 cut(s) 564
Cfr9I CCCGGG 1 cut(s) 1015
ClaI ATCGAT 1 cut(s) 996
CseI GACGC 4 cut(s) 239, 254, 326, 358
CsiI ACCWGGT 1 cut(s) 861
Csp6I GTAC 5 cut(s) 259, 463, 665, 697, 784
CviAII CATG 5 cut(s) 64, 120, 397, 676, 694
CviQI GTAC 5 cut(s) 259, 463, 665, 697, 784
DdeI CTNAG 4 cut(s) 40, 660, 773, 800
DinI GGCGCC 2 cut(s) 547, 567
DpnI GATC 5 cut(s) 194, 434, 995, 999, 1061
DpnII GATC 5 cut(s) 192, 432, 993, 997, 1059
DrdI GACNNNNNNGTC 1 cut(s) 1337
DriI GACNNNNNGTC 1 cut(s) 421
DseDI GACNNNNNNGTC 1 cut(s) 1337
EaeI YGGCCR 2 cut(s) 7, 478
EagI CGGCCG 1 cut(s) 478
Eam1104I CTCTTC 1 cut(s) 1181
Eam1105I GACNNNNNGTC 1 cut(s) 421
EarI CTCTTC 1 cut(s) 1181
EciI GGCGGA 2 cut(s) 1305, 1337
Ecl136II GAGCTC 2 cut(s) 601, 1177
EclXI CGGCCG 1 cut(s) 478
Eco130I CCWWGG 1 cut(s) 63
Eco147I AGGCCT 2 cut(s) 380, 935
Eco24I GRGCYC 4 cut(s) 603, 1027, 1179, 1309
Eco47I GGWCC 8 cut(s) 163, 172, 222, 267, 415, 1047, 1099, 1330
Eco47III AGCGCT 2 cut(s) 810, 853
Eco52I CGGCCG 1 cut(s) 478
Eco53kI GAGCTC 2 cut(s) 601, 1177
Eco57I CTGAAG 1 cut(s) 989
Eco88I CYCGRG 1 cut(s) 1015
Eco91I GGTNACC 1 cut(s) 754
EcoICRI GAGCTC 2 cut(s) 601, 1177
EcoO109I RGGNCCY 3 cut(s) 222, 1099, 1330
EcoO65I GGTNACC 1 cut(s) 754
EcoRII CCWGG 6 cut(s) 109, 159, 216, 500, 861, 944
EcoT14I CCWWGG 1 cut(s) 63
EcoT38I GRGCYC 4 cut(s) 603, 1027, 1179, 1309
EgeI GGCGCC 2 cut(s) 547, 567
EheI GGCGCC 2 cut(s) 547, 567
ErhI CCWWGG 1 cut(s) 63
FaeI CATG 5 cut(s) 67, 123, 400, 679, 697
FaqI GGGAC 6 cut(s) 235, 356, 385, 428, 1060, 1325
FatI CATG 5 cut(s) 63, 119, 396, 675, 693
FauI CCCGC 5 cut(s) 174, 410, 498, 1138, 1278
FokI GGATG 3 cut(s) 1291, 1301, 1337
FriOI GRGCYC 4 cut(s) 603, 1027, 1179, 1309
FseI GGCCGGCC 1 cut(s) 156
FspBI CTAG 1 cut(s) 624
GlaI GCGC 5 cut(s) 547, 567, 739, 810, 853
GsaI CCCAGC 1 cut(s) 545
HaeII RGCGCY 5 cut(s) 549, 569, 741, 812, 855
HaeIII GGCC 9 cut(s) 9, 115, 152, 156, 380, 480, 722, 935, 954
HapII CCGG 9 cut(s) 153, 199, 264, 816, 890, 1016, 1247, 1319, 1343
HgaI GACGC 4 cut(s) 239, 254, 326, 358
HhaI GCGC 5 cut(s) 548, 568, 740, 811, 854
Hin1I GRCGYC 5 cut(s) 231, 246, 318, 546, 566
Hin1II CATG 5 cut(s) 67, 123, 400, 679, 697
Hin6I GCGC 5 cut(s) 546, 566, 738, 809, 852
HinP1I GCGC 5 cut(s) 546, 566, 738, 809, 852
HinfI GANTC 8 cut(s) 95, 407, 422, 557, 876, 964, 1003, 1091
HpaII CCGG 9 cut(s) 153, 199, 264, 816, 890, 1016, 1247, 1319, 1343
HphI GGTGA 9 cut(s) 170, 442, 623, 718, 748, 803, 1178, 1195, 1216
Hpy166II GTNNAC 3 cut(s) 592, 917, 1207
Hpy188I TCNGA 8 cut(s) 49, 185, 706, 883, 926, 969, 1002, 1108
Hpy188III TCNNGA 3 cut(s) 676, 940, 1228
Hpy8I GTNNAC 3 cut(s) 592, 917, 1207
Hpy99I CGWCG 6 cut(s) 233, 248, 461, 500, 710, 1108
HpyCH4III ACNGT 2 cut(s) 589, 824
HpyCH4IV ACGT 2 cut(s) 495, 607
HpyCH4V TGCA 3 cut(s) 979, 1123, 1135
HpyF10VI GCNNNNNNNGC 8 cut(s) 125, 213, 279, 627, 817, 1120, 1129, 1319
HpyF3I CTNAG 4 cut(s) 40, 660, 773, 800
HpySE526I ACGT 2 cut(s) 495, 607
Hsp92I GRCGYC 5 cut(s) 231, 246, 318, 546, 566
Hsp92II CATG 5 cut(s) 67, 123, 400, 679, 697
HspAI GCGC 5 cut(s) 546, 566, 738, 809, 852
KasI GGCGCC 2 cut(s) 545, 565
KpnI GGTACC 1 cut(s) 668
KroI GCCGGC 3 cut(s) 152, 1246, 1318
KroNI GCCGGC 3 cut(s) 154, 1248, 1320
KspI CCGCGG 1 cut(s) 564
Kzo9I GATC 5 cut(s) 192, 432, 993, 997, 1059
LmnI GCTCC 2 cut(s) 315, 1318
Lsp1109I GCAGC 2 cut(s) 558, 1119
LweI GCATC 2 cut(s) 297, 1119
MabI ACCWGGT 1 cut(s) 861
MaeI CTAG 1 cut(s) 624
MaeII ACGT 2 cut(s) 495, 607
MaeIII GTNAC 4 cut(s) 448, 518, 632, 754
MalI GATC 5 cut(s) 194, 434, 995, 999, 1061
MboI GATC 5 cut(s) 192, 432, 993, 997, 1059
MboII GAAGA 7 cut(s) 286, 653, 656, 898, 982, 1198, 1279
MhlI GDGCHC 6 cut(s) 512, 603, 822, 1027, 1179, 1309
MlsI TGGCCA 1 cut(s) 9
MluNI TGGCCA 1 cut(s) 9
Mly113I GGCGCC 2 cut(s) 546, 566
MlyI GAGTC 3 cut(s) 416, 431, 1085
MmeI TCCRAC 4 cut(s) 450, 729, 904, 1086
Mox20I TGGCCA 1 cut(s) 9
MreI CGCCGGCG 1 cut(s) 1318
MroNI GCCGGC 3 cut(s) 152, 1246, 1318
MscI TGGCCA 1 cut(s) 9
MseI TTAA 1 cut(s) 534
Msp20I TGGCCA 1 cut(s) 9
MspA1I CMGCKG 4 cut(s) 169, 563, 571, 751
MspI CCGG 9 cut(s) 153, 199, 264, 816, 890, 1016, 1247, 1319, 1343
MvaI CCWGG 6 cut(s) 111, 161, 218, 502, 863, 946
MvnI CGCG 4 cut(s) 405, 420, 486, 563
MwoI GCNNNNNNNGC 8 cut(s) 125, 213, 279, 627, 817, 1120, 1129, 1319
NaeI GCCGGC 3 cut(s) 154, 1248, 1320
NarI GGCGCC 2 cut(s) 546, 566
NciI CCSGG 5 cut(s) 265, 817, 1016, 1017, 1343
NcoI CCATGG 1 cut(s) 63
NdeII GATC 5 cut(s) 192, 432, 993, 997, 1059
NgoMIV GCCGGC 3 cut(s) 152, 1246, 1318
NlaIII CATG 5 cut(s) 67, 123, 400, 679, 697
NmeAIII GCCGAG 2 cut(s) 114, 574
NmuCI GTSAC 3 cut(s) 448, 632, 754
PagI TCATGA 1 cut(s) 675
PceI AGGCCT 2 cut(s) 380, 935
PcsI WCGNNNNNNNCGW 3 cut(s) 483, 1100, 1247
PdiI GCCGGC 3 cut(s) 154, 1248, 1320
PfeI GAWTC 5 cut(s) 95, 557, 876, 964, 1003
PfoI TCCNGGA 2 cut(s) 159, 1341
PleI GAGTC 3 cut(s) 415, 430, 1085
PluTI GGCGCC 2 cut(s) 549, 569
PpsI GAGTC 3 cut(s) 415, 430, 1085
PpuMI RGGWCCY 3 cut(s) 222, 1099, 1330
Psp124BI GAGCTC 2 cut(s) 603, 1179
Psp5II RGGWCCY 3 cut(s) 222, 1099, 1330
Psp6I CCWGG 6 cut(s) 109, 159, 216, 500, 861, 944
PspEI GGTNACC 1 cut(s) 754
PspFI CCCAGC 1 cut(s) 541
PspGI CCWGG 6 cut(s) 109, 159, 216, 500, 861, 944
PspPPI RGGWCCY 3 cut(s) 222, 1099, 1330
PstNI CAGNNNCTG 1 cut(s) 47
PvuII CAGCTG 1 cut(s) 751
RigI GGCCGGCC 1 cut(s) 156
RsaI GTAC 5 cut(s) 260, 464, 666, 698, 785
RsaNI GTAC 5 cut(s) 259, 463, 665, 697, 784
SacI GAGCTC 2 cut(s) 603, 1179
SacII CCGCGG 1 cut(s) 564
SaqAI TTAA 1 cut(s) 534
Sau3AI GATC 5 cut(s) 192, 432, 993, 997, 1059
SchI GAGTC 3 cut(s) 416, 431, 1085
SduI GDGCHC 6 cut(s) 512, 603, 822, 1027, 1179, 1309
SexAI ACCWGGT 1 cut(s) 861
SfaNI GCATC 2 cut(s) 297, 1119
SfoI GGCGCC 2 cut(s) 547, 567
Sfr303I CCGCGG 1 cut(s) 564
SgrAI CRCCGGYG 1 cut(s) 1318
SgrBI CCGCGG 1 cut(s) 564
SinI GGWCC 8 cut(s) 163, 172, 222, 267, 415, 1047, 1099, 1330
SmaI CCCGGG 1 cut(s) 1017
SmlI CTYRAG 2 cut(s) 1178, 1226
SmoI CTYRAG 2 cut(s) 1178, 1226
SpeI ACTAGT 1 cut(s) 623
SseBI AGGCCT 2 cut(s) 380, 935
SspDI GGCGCC 2 cut(s) 545, 565
SspI AATATT 1 cut(s) 1349
SspMI CTAG 1 cut(s) 624
SstI GAGCTC 2 cut(s) 603, 1179
StuI AGGCCT 2 cut(s) 380, 935
StyI CCWWGG 1 cut(s) 63
TaaI ACNGT 2 cut(s) 589, 824
TaiI ACGT 2 cut(s) 498, 610
TaqI TCGA 5 cut(s) 297, 996, 1062, 1094, 1173
TaqII GACCGA 1 cut(s) 1064
TatI WGTACW 3 cut(s) 462, 696, 783
TauI GCSGC 8 cut(s) 207, 276, 323, 483, 486, 566, 571, 899
TfiI GAWTC 5 cut(s) 95, 557, 876, 964, 1003
Tru1I TTAA 1 cut(s) 534
Tru9I TTAA 1 cut(s) 534
TscAI CASTG 2 cut(s) 97, 637
TseFI GTSAC 3 cut(s) 448, 632, 754
TseI GCWGC 2 cut(s) 571, 1132
Tsp45I GTSAC 3 cut(s) 448, 632, 754
TspDTI ATGAA 2 cut(s) 666, 1305
TspGWI ACGGA 2 cut(s) 888, 1247
TspMI CCCGGG 1 cut(s) 1015
TspRI CASTG 2 cut(s) 97, 637
VpaK11BI GGWCC 8 cut(s) 163, 172, 222, 267, 415, 1047, 1099, 1330
XcmI CCANNNNNNNNNTGG 2 cut(s) 117, 748
XmaI CCCGGG 1 cut(s) 1015
XspI CTAG 1 cut(s) 624
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.