Rmu_sc0001463.1_g000012

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001463.1
OG0000041
Physical Location & Seq
Forward (+)
36990 .. 38696
1707 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001463.1_g000012.1.cds

Sequence Viewer

Length: 1263 bp
atggaggaccttgattctactgtcaaggcttctctccctcacttctctgatgctagctatgctagcaagctcaaaaaaccagtcgatcgctacaagaacatacacaacaaacttgattatgattggcgttgtgctgtggtggttaagctcatgggtaaaccaaactctacaaacacttttgatttcatgcttaagggcttaagaaggaagtggcaagtcaaagggggctggcaattaattgatctgcttaacgatttcttcattgttaagttcaatttagaggaagatatgaactatgttctctgtggtggaccttggattttggctgggcagaccttaattgttaggaaatggaggcctaattttgaccctaggagtgaggatttaaggcatgactctgatggccatgatgaccaggcttctgtgatcaaggaagatatggttccctggatgctaatgaactacaggaataagaagaaaagtattgaggctaatggtcctaagaagaatgccaacaaggactctaggttcacagtgctgcaagatgaggctgctactgatgatgctgaacttgagactatccctgacgcttctgtaaaaacatcaactgtccctattgtgaaactctggaccagcttccaagagaagaagaagaacctgaataaggccacccctgccaaacctagctcatctactatttctaatgttactggtattggtacttctgcatctgaaagcctgaagactggccctcgagtcccaatgaaagatgtatctaatgttgagagcaactgtggatccaaatctactatgcaatatcaaagaaaatctaaaggtattatttcttctgttgccaaacaccagcctaacgttttcaaaaagctttcctttgagaatgttgagaatgtgtttgggaatggaatttctacaatatttggtcactgccctcctgaggggagtatgttggaagctagaattgaaccatctatttctcaggcctctgattgttttgttgagaagacctttgctgacaatagcaatttgacaggtgatgacaaccagccttcccaagttggggaaggttgtagtaaatatgcaccttttatccagaaccttgtttctttttatagacttatgactgcaaacaataataggatgatgatgcaaaatatcacaacaagaaaaaaccacagcacacgaacacataattttatagaggttcgacaaaaactttgcctacgtcctctgtgtgatctctcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

420

Amino Acids

47.35

Weight (kDa)

9.05

Isoelectric Point (pI)

35.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01050
fragaria_vesca FvH4_1g24181 FvH4_1g28741 FvH4_1g29781 FvH4_2g00621 FvH4_2g04885 FvH4_2g11953 FvH4_2g11954 FvH4_2g12001 FvH4_2g12002 FvH4_2g12222 FvH4_2g12223 FvH4_2g38351 FvH4_3g04401 FvH4_3g31330 FvH4_3g33091 FvH4_4g11461 FvH4_5g27993 FvH4_5g27994 FvH4_5g28072 FvH4_5g28231 FvH4_5g28591 FvH4_5g34261 FvH4_6g18162 FvH4_6g25500 FvH4_6g25561 FvH4_6g25792 FvH4_6g27602 FvH4_6g46881
malus_domestica MD03G1019700.v1.1
prunus_persica Prupe.1G055400_v2.0.a1 Prupe.1G179200_v2.0.a1 Prupe.1G208200_v2.0.a1 Prupe.1G231200_v2.0.a1 Prupe.2G044900_v2.0.a1 Prupe.2G055100_v2.0.a1 Prupe.2G097600_v2.0.a1 Prupe.2G114200_v2.0.a1 Prupe.3G109000_v2.0.a1 Prupe.3G109300_v2.0.a1 Prupe.3G109600_v2.0.a1 Prupe.4G246900_v2.0.a1 Prupe.5G026400_v2.0.a1
pyrus_communis pycom05g17130 pycom07g06820 pycom07g18590 pycom07g22730 pycom12401g00120 pycom12401g00180 pycom420g00470
rosa_chinensis RchiOBHm_Chr1g0342591 RchiOBHm_Chr1g0342601 RchiOBHm_Chr1g0342611 RchiOBHm_Chr1g0351011 RchiOBHm_Chr2g0146151 RchiOBHm_Chr2g0171821 RchiOBHm_Chr3g0492921 RchiOBHm_Chr3g0492931 RchiOBHm_Chr4g0406871 RchiOBHm_Chr4g0426311 RchiOBHm_Chr5g0020721 RchiOBHm_Chr5g0050111 RchiOBHm_Chr5g0051681 RchiOBHm_Chr5g0053531 RchiOBHm_Chr5g0054841 RchiOBHm_Chr5g0055061 RchiOBHm_Chr5g0055071 RchiOBHm_Chr6g0248911 RchiOBHm_Chr6g0291741 RchiOBHm_Chr7g0187781 RchiOBHm_Chr7g0220081 RchiOBHm_Chr7g0224391 RchiOBHm_Chr7g0235221
rosa_laevigata RLG00000002133 RLG00000002402 RLG00000002736 RLG00000011046 RLG00000013214 RLG00000016550 RLG00000021669 RLG00000022948 RLG00000023691 RLG00000024682 RLG00000027826 RLG00000029734 RLG00000029831 RLG00000030305 RLG00000037042
rosa_multiflora Rmu_co7992532.1_g000001 Rmu_co8021462.1_g000001 Rmu_co8229237.1_g000001 Rmu_co8281571.1_g000001 Rmu_co8326451.1_g000001 Rmu_co8359553.1_g000001 Rmu_co8372117.1_g000001 Rmu_co8427177.1_g000001 Rmu_co8474063.1_g000002 Rmu_sc0000007.1_g000020 Rmu_sc0000173.1_g000002 Rmu_sc0000367.1_g000086 Rmu_sc0000367.1_g000088 Rmu_sc0000559.1_g000002 Rmu_sc0000733.1_g000014 Rmu_sc0000745.1_g000006 Rmu_sc0000791.1_g000046 Rmu_sc0000791.1_g000049 Rmu_sc0000824.1_g000010 Rmu_sc0000824.1_g000011 Rmu_sc0000834.1_g000009 Rmu_sc0000834.1_g000011 Rmu_sc0000911.1_g000020 Rmu_sc0000935.1_g000034 Rmu_sc0000935.1_g000051 Rmu_sc0000935.1_g000053 Rmu_sc0001000.1_g000005 Rmu_sc0001000.1_g000006 Rmu_sc0001150.1_g000004 Rmu_sc0001227.1_g000002 Rmu_sc0001322.1_g000018 Rmu_sc0001343.1_g000001 Rmu_sc0001356.1_g000004 Rmu_sc0001356.1_g000005 Rmu_sc0001363.1_g000007 Rmu_sc0001463.1_g000012 Rmu_sc0001484.1_g000023 Rmu_sc0001516.1_g000003 Rmu_sc0001516.1_g000005 Rmu_sc0001619.1_g000005 Rmu_sc0001648.1_g000032 Rmu_sc0001648.1_g000035 Rmu_sc0001694.1_g000008 Rmu_sc0001809.1_g000023 Rmu_sc0002093.1_g000027 Rmu_sc0002231.1_g000004 Rmu_sc0002245.1_g000001 Rmu_sc0002245.1_g000003 Rmu_sc0002354.1_g000045 Rmu_sc0002354.1_g000048 Rmu_sc0002368.1_g000014 Rmu_sc0002368.1_g000016 Rmu_sc0002368.1_g000017 Rmu_sc0002401.1_g000030 Rmu_sc0002487.1_g000012 Rmu_sc0002798.1_g000028 Rmu_sc0002923.1_g000012 Rmu_sc0002960.1_g000002 Rmu_sc0003033.1_g000072 Rmu_sc0003133.1_g000015 Rmu_sc0003168.1_g000007 Rmu_sc0003945.1_g000002 Rmu_sc0003945.1_g000004 Rmu_sc0003945.1_g000005 Rmu_sc0003979.1_g000004 Rmu_sc0004005.1_g000007 Rmu_sc0004059.1_g000018 Rmu_sc0004064.1_g000001 Rmu_sc0004083.1_g000007 Rmu_sc0004083.1_g000008 Rmu_sc0004354.1_g000033 Rmu_sc0004368.1_g000035 Rmu_sc0004483.1_g000032 Rmu_sc0004646.1_g000012 Rmu_sc0005014.1_g000006 Rmu_sc0005016.1_g000046 Rmu_sc0005016.1_g000051 Rmu_sc0005033.1_g000005 Rmu_sc0005033.1_g000007 Rmu_sc0005065.1_g000002 Rmu_sc0005065.1_g000004 Rmu_sc0005168.1_g000012 Rmu_sc0005238.1_g000001 Rmu_sc0005365.1_g000012 Rmu_sc0005631.1_g000005 Rmu_sc0005704.1_g000013 Rmu_sc0005704.1_g000014 Rmu_sc0005781.1_g000030 Rmu_sc0005789.1_g000016 Rmu_sc0006185.1_g000001 Rmu_sc0006185.1_g000002 Rmu_sc0006266.1_g000044 Rmu_sc0006561.1_g000018 Rmu_sc0006695.1_g000016 Rmu_sc0007739.1_g000022 Rmu_sc0008050.1_g000013 Rmu_sc0008169.1_g000006 Rmu_sc0008855.1_g000006 Rmu_sc0009298.1_g000002 Rmu_sc0009495.1_g000005 Rmu_sc0010608.1_g000003 Rmu_sc0010958.1_g000005 Rmu_sc0011506.1_g000001 Rmu_sc0011790.1_g000002 Rmu_sc0011790.1_g000003 Rmu_sc0012042.1_g000004 Rmu_sc0012042.1_g000005 Rmu_sc0012140.1_g000020 Rmu_sc0012726.1_g000005 Rmu_sc0012746.1_g000023 Rmu_sc0013193.1_g000002 Rmu_sc0013193.1_g000003 Rmu_sc0017997.1_g000001 Rmu_sc0021401.1_g000001 Rmu_sc0025959.1_g000001 Rmu_sc0026403.1_g000003 Rmu_sc0028616.1_g000002 Rmu_sc0029801.1_g000002 Rmu_sc0032453.1_g000001 Rmu_sc0033672.1_g000002 Rmu_sc0034553.1_g000001 Rmu_sc0036883.1_g000001 Rmu_ssc0000096.1_g000001 Rmu_ssc0000158.1_g000031 Rmu_ssc0000291.1_g000034 Rmu_ssc0000381.1_g000026 Rmu_ssc0000387.1_g000010 Rmu_ssc0000474.1_g000002 Rmu_ssc0000474.1_g000004
rosa_roxburghii Rroxscaffold_1G00020090 Rroxscaffold_1G00020100 Rroxscaffold_1G00022940 Rroxscaffold_1G00044600 Rroxscaffold_1G00054420 Rroxscaffold_1G00054430 Rroxscaffold_1G00056440 Rroxscaffold_2G00090180 Rroxscaffold_2G00101250 Rroxscaffold_2G00110600 Rroxscaffold_2G00152800 Rroxscaffold_4G00320370 Rroxscaffold_4G00320640 Rroxscaffold_4G00322420 Rroxscaffold_4G00324670 Rroxscaffold_5G00332760 Rroxscaffold_5G00345010 Rroxscaffold_5G00345020 Rroxscaffold_5G00355470 Rroxscaffold_5G00385520 Rroxscaffold_6G00394610 Rroxscaffold_6G00394700 Rroxscaffold_7G00164190 Rroxscaffold_7G00182750 Rroxscaffold_7G00183540 Rroxscaffold_7G00203520 Rroxscaffold_7G00211630
rosa_rugosa Rorug01G0041400 Rorug01G0041500 Rorug01G0065300 Rorug01G0065300 Rorug01G0069700 Rorug01G0069800 Rorug01G0070300 Rorug01G0072300 Rorug01G0072900 Rorug01G0093100 Rorug01G0147100.1 Rorug01G0196900 Rorug01G0259700 Rorug02G0162000 Rorug02G0182700 Rorug02G0212300 Rorug02G0214700 Rorug02G0229900 Rorug02G0246100 Rorug02G0257400 Rorug02G0259100 Rorug02G0341400 Rorug02G0341500 Rorug02G0341700 Rorug02G0341800 Rorug02G0355600 Rorug02G0386100 Rorug02G0386100 Rorug02G0387000 Rorug02G0387100 Rorug02G0388400 Rorug02G0388500 Rorug02G0429100 Rorug02G0429100 Rorug02G0455300 Rorug02G0634400 Rorug03G0163200 Rorug03G0198500 Rorug03G0199600 Rorug03G0204000 Rorug03G0265600 Rorug03G0266100 Rorug03G0266200 Rorug03G0280600 Rorug03G0348200 Rorug03G0349700 Rorug03G0349800 Rorug04G0020200 Rorug04G0073700 Rorug04G0215000 Rorug04G0426100 Rorug05G0064200 Rorug05G0064300 Rorug05G0265700 Rorug05G0287400 Rorug05G0287500 Rorug05G0287500 Rorug05G0405000 Rorug05G0525700 Rorug05G0525800 Rorug05G0588200 Rorug06G0038200 Rorug06G0057900 Rorug06G0058000 Rorug06G0058500 Rorug06G0058600 Rorug06G0116700 Rorug06G0159300.1 Rorug06G0159400 Rorug06G0174700 Rorug06G0375500 Rorug07G0091400 Rorug07G0094900 Rorug07G0108100 Rorug07G0140700 Rorug07G0140700 Rorug07G0207100 Rorug07G0207100 Rorug07G0207200 Rorug07G0287300
rosa_samantha Rh1AG100100 Rh1AG104500 Rh1BG150700 Rh1BG237700 Rh1BG334000 Rh1CG090000 Rh1CG100100 Rh1CG347300 Rh1DG090500 Rh1DG096100 Rh1DG107400 Rh1DG182500 Rh1DG265700 Rh1DG365200 Rh2BG256800 Rh2BG361300 Rh2BG468600 Rh2BG549800 Rh2CG270900 Rh2DG276700 Rh2DG276800 Rh2DG377700 Rh2DG477900 Rh3AG161200 Rh3BG138800 Rh3BG185700 Rh3BG269600 Rh3CG176000 Rh4AG006100 Rh4AG216700 Rh4AG355800 Rh4CG108600 Rh5AG141700 Rh5AG480000 Rh5BG014500 Rh5BG134600 Rh5BG295400 Rh5BG552900 Rh5CG058600 Rh5CG286400 Rh5CG350900 Rh5CG575800 Rh5DG004300 Rh5DG254600 Rh5DG356500 Rh6AG106500 Rh6AG191100 Rh6AG224700 Rh6BG074700 Rh6BG181400 Rh6BG352200 Rh6BG408400 Rh6BG453600 Rh6CG047400 Rh6CG172200 Rh6CG189400 Rh6CG515800 Rh6DG042900 Rh6DG163400 Rh7AG089300 Rh7AG227400 Rh7AG275600 Rh7AG375100 Rh7AG460900 Rh7AG485200 Rh7BG146100 Rh7BG354300 Rh7CG077100 Rh7CG294500 Rh7CG393800 Rh7DG041700 Rh7DG062700 Rh7DG091700 Rh7DG178900 Rh7DG192300 Rh7DG297000 Rh7DG403600 Rh7DG411800
rosa_wichuraiana Rw0G007100 Rw0G011430 Rw1G003580 Rw1G004040 Rw1G005880 Rw1G009860 Rw1G009990 Rw1G012190 Rw1G012200 Rw1G013740 Rw1G013750 Rw1G016710 Rw1G021050 Rw2G023790 Rw2G028810 Rw2G035890 Rw2G036250 Rw4G008880 Rw4G014380 Rw4G014390 Rw4G016020 Rw4G037160 Rw5G010060 Rw5G030620 Rw5G033840 Rw5G049840 Rw5G049850 Rw6G003450 Rw6G015080 Rw7G019640 Rw7G024060 Rw7G024070 Rw7G029090 Rw7G037010 Rw7G039170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclI AACGTT 1 cut(s) 870
AclWI GGATC 2 cut(s) 792, 805
AcoI YGGCCR 1 cut(s) 403
AcsI RAATTY 1 cut(s) 921
AcuI CTGAAG 1 cut(s) 761
AfaI GTAC 1 cut(s) 721
AfiI CCNNNNNNNGG 5 cut(s) 664, 952, 953, 1074, 1075
AflII CTTAAG 2 cut(s) 191, 199
AgsI TTSAA 3 cut(s) 274, 877, 980
AjnI CCWGG 2 cut(s) 414, 446
AloI GAACNNNNNNTCC 2 cut(s) 512, 544
AluBI AGCT 7 cut(s) 57, 70, 148, 636, 687, 883, 971
AluI AGCT 7 cut(s) 57, 70, 148, 636, 687, 883, 971
Alw26I GTCTC 1 cut(s) 569
AlwI GGATC 2 cut(s) 792, 805
Ama87I CYCGRG 1 cut(s) 753
AoxI GGCC 5 cut(s) 356, 403, 666, 748, 996
ApeKI GCWGC 2 cut(s) 538, 551
ApoI RAATTY 1 cut(s) 921
ArsI GACNNNNNNTTYG 4 cut(s) 66, 98, 1215, 1247
AseI ATTAAT 1 cut(s) 236
AspA2I CCTAGG 1 cut(s) 371
AspS9I GGNCC 5 cut(s) 7, 311, 497, 630, 749
AsuHPI GGTGA 1 cut(s) 1061
AsuNHI GCTAGC 2 cut(s) 53, 62
AvaI CYCGRG 1 cut(s) 753
AvaII GGWCC 4 cut(s) 7, 311, 497, 630
AvrII CCTAGG 1 cut(s) 371
AxyI CCTNAGG 1 cut(s) 951
BalI TGGCCA 1 cut(s) 405
BamHI GGATCC 1 cut(s) 797
BarI GAAGNNNNNNTAC 4 cut(s) 706, 738, 829, 861
BbsI GAAGAC 2 cut(s) 749, 1025
BbvI GCAGC 2 cut(s) 525, 538
BccI CCATC 2 cut(s) 395, 991
BciT130I CCWGG 2 cut(s) 416, 448
BclI TGATCA 1 cut(s) 426
BcoDI GTCTC 1 cut(s) 569
BfaI CTAG 6 cut(s) 54, 63, 372, 525, 684, 972
BfmI CTRYAG 1 cut(s) 463
BfrI CTTAAG 2 cut(s) 191, 199
BisI GCNGC 2 cut(s) 539, 552
BlnI CCTAGG 1 cut(s) 371
BlsI GCNGC 2 cut(s) 540, 553
Bme1390I CCNGG 2 cut(s) 416, 448
Bme18I GGWCC 4 cut(s) 7, 311, 497, 630
BmeT110I CYCGRG 1 cut(s) 753
BmgT120I GGNCC 5 cut(s) 7, 311, 497, 630, 749
BmiI GGNNCC 2 cut(s) 444, 799
BmrFI CCNGG 2 cut(s) 416, 448
BmsI GCATC 5 cut(s) 40, 441, 553, 737, 1152
BmtI GCTAGC 2 cut(s) 57, 66
BpiI GAAGAC 2 cut(s) 749, 1025
BpuEI CTTGAG 1 cut(s) 593
BsaBI GATNNNNATC 1 cut(s) 802
BsaJI CCNNGG 3 cut(s) 314, 371, 446
Bsc4I CCNNNNNNNGG 5 cut(s) 664, 952, 953, 1074, 1075
Bse1I ACTGG 3 cut(s) 80, 715, 751
Bse21I CCTNAGG 1 cut(s) 951
Bse8I GATNNNNATC 1 cut(s) 802
BseBI CCWGG 2 cut(s) 416, 448
BseDI CCNNGG 3 cut(s) 314, 371, 446
BseGI GGATG 2 cut(s) 456, 1161
BseJI GATNNNNATC 1 cut(s) 802
BseLI CCNNNNNNNGG 5 cut(s) 664, 952, 953, 1074, 1075
BseMII CTCAG 2 cut(s) 942, 1007
BseNI ACTGG 3 cut(s) 80, 715, 751
BseXI GCAGC 2 cut(s) 525, 538
BseYI CCCAGC 1 cut(s) 326
Bsh1285I CGRYCG 1 cut(s) 88
BshFI GGCC 5 cut(s) 358, 405, 668, 750, 998
BsiEI CGRYCG 1 cut(s) 88
BsiHKCI CYCGRG 1 cut(s) 753
BslFI GGGAC 2 cut(s) 596, 743
BslI CCNNNNNNNGG 5 cut(s) 664, 952, 953, 1074, 1075
BsmAI GTCTC 1 cut(s) 569
BsmFI GGGAC 2 cut(s) 596, 743
BsmI GAATGC 1 cut(s) 514
BsnI GGCC 5 cut(s) 358, 405, 668, 750, 998
BsoBI CYCGRG 1 cut(s) 753
Bsp143I GATC 5 cut(s) 85, 241, 426, 797, 1252
BspANI GGCC 5 cut(s) 358, 405, 668, 750, 998
BspCNI CTCAG 2 cut(s) 943, 1006
BspLI GGNNCC 2 cut(s) 444, 799
BspOI GCTAGC 2 cut(s) 57, 66
BspPI GGATC 2 cut(s) 792, 805
BspTI CTTAAG 2 cut(s) 191, 199
BsrI ACTGG 3 cut(s) 80, 715, 751
BssECI CCNNGG 3 cut(s) 314, 371, 446
BssMI GATC 5 cut(s) 85, 241, 426, 797, 1252
BssT1I CCWWGG 2 cut(s) 314, 371
Bst2UI CCWGG 2 cut(s) 416, 448
Bst4CI ACNGT 4 cut(s) 22, 535, 610, 794
BstAFI CTTAAG 2 cut(s) 191, 199
BstC8I GCNNGC 4 cut(s) 55, 64, 68, 230
BstDEI CTNAG 3 cut(s) 501, 951, 993
BstENI CCTNNNNNAGG 1 cut(s) 662
BstF5I GGATG 2 cut(s) 456, 1161
BstKTI GATC 5 cut(s) 88, 244, 429, 800, 1255
BstMAI GTCTC 1 cut(s) 569
BstMBI GATC 5 cut(s) 85, 241, 426, 797, 1252
BstMCI CGRYCG 1 cut(s) 88
BstMWI GCNNNNNNNGC 3 cut(s) 59, 63, 674
BstNI CCWGG 2 cut(s) 416, 448
BstSCI CCNGG 2 cut(s) 414, 446
BstSFI CTRYAG 1 cut(s) 463
BstV1I GCAGC 2 cut(s) 525, 538
BstV2I GAAGAC 2 cut(s) 749, 1025
BstX2I RGATCY 1 cut(s) 797
BstYI RGATCY 1 cut(s) 797
Bsu36I CCTNAGG 1 cut(s) 951
BsuRI GGCC 5 cut(s) 358, 405, 668, 750, 998
BtsCI GGATG 2 cut(s) 456, 1161
BtsI GCAGTG 1 cut(s) 940
BtsIMutI CAGTG 2 cut(s) 540, 940
Cac8I GCNNGC 4 cut(s) 55, 64, 68, 230
Cfr13I GGNCC 5 cut(s) 7, 311, 497, 630, 749
CseI GACGC 1 cut(s) 596
Csp6I GTAC 1 cut(s) 720
CviAII CATG 4 cut(s) 151, 187, 392, 407
CviQI GTAC 1 cut(s) 720
DdeI CTNAG 3 cut(s) 501, 951, 993
DpnI GATC 5 cut(s) 87, 243, 428, 799, 1254
DpnII GATC 5 cut(s) 85, 241, 426, 797, 1252
EaeI YGGCCR 1 cut(s) 403
Eco130I CCWWGG 2 cut(s) 314, 371
Eco147I AGGCCT 2 cut(s) 358, 998
Eco47I GGWCC 4 cut(s) 7, 311, 497, 630
Eco57I CTGAAG 1 cut(s) 761
Eco81I CCTNAGG 1 cut(s) 951
Eco88I CYCGRG 1 cut(s) 753
EcoNI CCTNNNNNAGG 1 cut(s) 662
EcoO109I RGGNCCY 1 cut(s) 7
EcoRII CCWGG 2 cut(s) 414, 446
EcoT14I CCWWGG 2 cut(s) 314, 371
ErhI CCWWGG 2 cut(s) 314, 371
FaeI CATG 4 cut(s) 154, 190, 395, 410
FalI AAGNNNNNCTT 2 cut(s) 872, 904
FaqI GGGAC 2 cut(s) 596, 743
FatI CATG 4 cut(s) 150, 186, 391, 406
FbaI TGATCA 1 cut(s) 426
Fnu4HI GCNGC 2 cut(s) 539, 552
FokI GGATG 2 cut(s) 463, 1168
Fsp4HI GCNGC 2 cut(s) 539, 552
FspBI CTAG 6 cut(s) 54, 63, 372, 525, 684, 972
GluI GCNGC 2 cut(s) 539, 552
GsaI CCCAGC 1 cut(s) 330
HaeIII GGCC 5 cut(s) 358, 405, 668, 750, 998
HgaI GACGC 1 cut(s) 596
Hin1II CATG 4 cut(s) 154, 190, 395, 410
HindIII AAGCTT 1 cut(s) 881
HinfI GANTC 4 cut(s) 14, 395, 521, 756
HphI GGTGA 1 cut(s) 1061
Hpy166II GTNNAC 3 cut(s) 158, 311, 531
Hpy188I TCNGA 4 cut(s) 49, 400, 733, 1003
Hpy188III TCNNGA 4 cut(s) 628, 950, 1108, 1260
Hpy8I GTNNAC 3 cut(s) 158, 311, 531
HpyAV CCTTC 3 cut(s) 198, 1073, 1074
HpyCH4III ACNGT 4 cut(s) 22, 535, 610, 794
HpyCH4IV ACGT 2 cut(s) 870, 1240
HpyCH4V TGCA 6 cut(s) 541, 728, 814, 1097, 1142, 1165
HpyF10VI GCNNNNNNNGC 3 cut(s) 59, 63, 674
HpyF3I CTNAG 3 cut(s) 501, 951, 993
HpySE526I ACGT 2 cut(s) 870, 1240
Hsp92II CATG 4 cut(s) 154, 190, 395, 410
Ksp22I TGATCA 1 cut(s) 426
Kzo9I GATC 5 cut(s) 85, 241, 426, 797, 1252
Lsp1109I GCAGC 2 cut(s) 525, 538
LweI GCATC 5 cut(s) 40, 441, 553, 737, 1152
MaeI CTAG 6 cut(s) 54, 63, 372, 525, 684, 972
MaeII ACGT 2 cut(s) 870, 1240
MaeIII GTNAC 2 cut(s) 706, 938
MalI GATC 5 cut(s) 87, 243, 428, 799, 1254
MboI GATC 5 cut(s) 85, 241, 426, 797, 1252
MflI RGATCY 1 cut(s) 797
MlsI TGGCCA 1 cut(s) 405
MluCI AATT 9 cut(s) 233, 237, 274, 339, 361, 921, 975, 1039, 1207
MluNI TGGCCA 1 cut(s) 405
MlyI GAGTC 3 cut(s) 389, 515, 765
MmeI TCCRAC 1 cut(s) 945
Mox20I TGGCCA 1 cut(s) 405
MscI TGGCCA 1 cut(s) 405
MseI TTAA 8 cut(s) 144, 192, 200, 236, 249, 267, 338, 386
Msp20I TGGCCA 1 cut(s) 405
MspCI CTTAAG 2 cut(s) 191, 199
MspR9I CCNGG 2 cut(s) 416, 448
Mva1269I GAATGC 1 cut(s) 514
MvaI CCWGG 2 cut(s) 416, 448
MwoI GCNNNNNNNGC 3 cut(s) 59, 63, 674
NdeII GATC 5 cut(s) 85, 241, 426, 797, 1252
NheI GCTAGC 2 cut(s) 53, 62
NlaIII CATG 4 cut(s) 154, 190, 395, 410
NlaIV GGNNCC 2 cut(s) 444, 799
NmuCI GTSAC 1 cut(s) 938
PaeR7I CTCGAG 1 cut(s) 753
PceI AGGCCT 2 cut(s) 358, 998
PctI GAATGC 1 cut(s) 514
PfeI GAWTC 1 cut(s) 14
PkrI GCNGC 2 cut(s) 540, 553
Ple19I CGATCG 1 cut(s) 88
PleI GAGTC 3 cut(s) 389, 515, 764
PpsI GAGTC 3 cut(s) 389, 515, 764
PpuMI RGGWCCY 1 cut(s) 7
PshBI ATTAAT 1 cut(s) 236
Psp1406I AACGTT 1 cut(s) 870
Psp5II RGGWCCY 1 cut(s) 7
Psp6I CCWGG 2 cut(s) 414, 446
PspFI CCCAGC 1 cut(s) 326
PspGI CCWGG 2 cut(s) 414, 446
PspN4I GGNNCC 2 cut(s) 444, 799
PspPI GGNCC 5 cut(s) 7, 311, 497, 630, 749
PspPPI RGGWCCY 1 cut(s) 7
PspXI VCTCGAGB 1 cut(s) 753
PsuI RGATCY 1 cut(s) 797
PvuI CGATCG 1 cut(s) 88
RsaI GTAC 1 cut(s) 721
RsaNI GTAC 1 cut(s) 720
SaqAI TTAA 8 cut(s) 144, 192, 200, 236, 249, 267, 338, 386
SatI GCNGC 2 cut(s) 539, 552
Sau3AI GATC 5 cut(s) 85, 241, 426, 797, 1252
Sau96I GGNCC 5 cut(s) 7, 311, 497, 630, 749
SchI GAGTC 3 cut(s) 389, 515, 765
ScrFI CCNGG 2 cut(s) 416, 448
SfaNI GCATC 5 cut(s) 40, 441, 553, 737, 1152
SfcI CTRYAG 1 cut(s) 463
Sfr274I CTCGAG 1 cut(s) 753
SinI GGWCC 4 cut(s) 7, 311, 497, 630
SlaI CTCGAG 1 cut(s) 753
SmlI CTYRAG 4 cut(s) 191, 199, 572, 753
SmoI CTYRAG 4 cut(s) 191, 199, 572, 753
Sse9I AATT 9 cut(s) 233, 237, 274, 339, 361, 921, 975, 1039, 1207
SseBI AGGCCT 2 cut(s) 358, 998
SspI AATATT 1 cut(s) 933
SspMI CTAG 6 cut(s) 54, 63, 372, 525, 684, 972
StuI AGGCCT 2 cut(s) 358, 998
StyD4I CCNGG 2 cut(s) 414, 446
StyI CCWWGG 2 cut(s) 314, 371
TaaI ACNGT 4 cut(s) 22, 535, 610, 794
TaiI ACGT 2 cut(s) 873, 1243
TaqI TCGA 3 cut(s) 84, 754, 1222
TasI AATT 9 cut(s) 233, 237, 274, 339, 361, 921, 975, 1039, 1207
TfiI GAWTC 1 cut(s) 14
Tru1I TTAA 8 cut(s) 144, 192, 200, 236, 249, 267, 338, 386
Tru9I TTAA 8 cut(s) 144, 192, 200, 236, 249, 267, 338, 386
TscAI CASTG 2 cut(s) 540, 947
TseFI GTSAC 1 cut(s) 938
TseI GCWGC 2 cut(s) 538, 551
Tsp45I GTSAC 1 cut(s) 938
TspDTI ATGAA 5 cut(s) 175, 250, 305, 473, 779
TspRI CASTG 2 cut(s) 540, 947
Vha464I CTTAAG 2 cut(s) 191, 199
VpaK11BI GGWCC 4 cut(s) 7, 311, 497, 630
VspI ATTAAT 1 cut(s) 236
XagI CCTNNNNNAGG 1 cut(s) 662
XapI RAATTY 1 cut(s) 921
XhoI CTCGAG 1 cut(s) 753
XmaJI CCTAGG 1 cut(s) 371
XspI CTAG 6 cut(s) 54, 63, 372, 525, 684, 972
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.