Domain of unknown function (DUF4283)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 81 - 151 | 2.4e-10 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 92 |
| AciI | CCGC | 2 cut(s) | 23, 26 |
| AclWI | GGATC | 3 cut(s) | 53, 66, 155 |
| AcoI | YGGCCR | 1 cut(s) | 381 |
| AcuI | CTGAAG | 1 cut(s) | 369 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 55, 329, 433, 453 |
| AgsI | TTSAA | 2 cut(s) | 298, 410 |
| AjnI | CCWGG | 1 cut(s) | 143 |
| AluBI | AGCT | 2 cut(s) | 179, 353 |
| AluI | AGCT | 2 cut(s) | 179, 353 |
| AlwI | GGATC | 3 cut(s) | 53, 66, 155 |
| AoxI | GGCC | 2 cut(s) | 112, 381 |
| ApeKI | GCWGC | 2 cut(s) | 28, 176 |
| AspLEI | GCGC | 1 cut(s) | 92 |
| AspS9I | GGNCC | 3 cut(s) | 51, 78, 113 |
| AsuC2I | CCSGG | 2 cut(s) | 55, 213 |
| AsuHPI | GGTGA | 3 cut(s) | 95, 448, 473 |
| AvaII | GGWCC | 2 cut(s) | 51, 78 |
| BalI | TGGCCA | 1 cut(s) | 383 |
| BamHI | GGATCC | 1 cut(s) | 58 |
| BbsI | GAAGAC | 1 cut(s) | 471 |
| BbvCI | CCTCAGC | 1 cut(s) | 354 |
| BbvI | GCAGC | 2 cut(s) | 15, 188 |
| BccI | CCATC | 5 cut(s) | 40, 104, 248, 392, 396 |
| BciT130I | CCWGG | 1 cut(s) | 145 |
| BcnI | CCSGG | 2 cut(s) | 55, 213 |
| BisI | GCNGC | 3 cut(s) | 26, 29, 177 |
| BlsI | GCNGC | 3 cut(s) | 27, 30, 178 |
| Bme1390I | CCNGG | 3 cut(s) | 55, 145, 213 |
| Bme18I | GGWCC | 2 cut(s) | 51, 78 |
| BmgT120I | GGNCC | 3 cut(s) | 51, 78, 113 |
| BmiI | GGNNCC | 2 cut(s) | 60, 79 |
| BmrFI | CCNGG | 3 cut(s) | 55, 145, 213 |
| BmrI | ACTGGG | 1 cut(s) | 84 |
| BmuI | ACTGGG | 1 cut(s) | 84 |
| BpiI | GAAGAC | 1 cut(s) | 471 |
| BpmI | CTGGAG | 2 cut(s) | 309, 475 |
| Bpu10I | CCTNAGC | 1 cut(s) | 354 |
| BpuMI | CCSGG | 2 cut(s) | 55, 213 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaJI | CCNNGG | 1 cut(s) | 54 |
| BsaWI | WCCGGW | 1 cut(s) | 48 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 252, 282 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 55, 329, 433, 453 |
| Bse1I | ACTGG | 3 cut(s) | 79, 381, 458 |
| BseBI | CCWGG | 1 cut(s) | 145 |
| BseDI | CCNNGG | 1 cut(s) | 54 |
| BseGI | GGATG | 3 cut(s) | 32, 96, 384 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 55, 329, 433, 453 |
| BseMII | CTCAG | 2 cut(s) | 345, 486 |
| BseNI | ACTGG | 3 cut(s) | 79, 381, 458 |
| BseRI | GAGGAG | 1 cut(s) | 273 |
| BseXI | GCAGC | 2 cut(s) | 15, 188 |
| Bsh1236I | CGCG | 1 cut(s) | 92 |
| BshFI | GGCC | 2 cut(s) | 114, 383 |
| BsiSI | CCGG | 3 cut(s) | 49, 54, 213 |
| BslFI | GGGAC | 1 cut(s) | 91 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 55, 329, 433, 453 |
| BsmFI | GGGAC | 1 cut(s) | 91 |
| BsnI | GGCC | 2 cut(s) | 114, 383 |
| Bsp143I | GATC | 3 cut(s) | 58, 117, 147 |
| BspACI | CCGC | 2 cut(s) | 23, 26 |
| BspANI | GGCC | 2 cut(s) | 114, 383 |
| BspCNI | CTCAG | 2 cut(s) | 346, 485 |
| BspFNI | CGCG | 1 cut(s) | 92 |
| BspLI | GGNNCC | 2 cut(s) | 60, 79 |
| BspPI | GGATC | 3 cut(s) | 53, 66, 155 |
| BsrI | ACTGG | 3 cut(s) | 79, 381, 458 |
| BssECI | CCNNGG | 1 cut(s) | 54 |
| BssMI | GATC | 3 cut(s) | 58, 117, 147 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| Bst2UI | CCWGG | 1 cut(s) | 145 |
| Bst6I | CTCTTC | 1 cut(s) | 293 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstDEI | CTNAG | 2 cut(s) | 354, 472 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 327 |
| BstF5I | GGATG | 3 cut(s) | 32, 96, 384 |
| BstFNI | CGCG | 1 cut(s) | 92 |
| BstHHI | GCGC | 1 cut(s) | 92 |
| BstKTI | GATC | 3 cut(s) | 61, 120, 150 |
| BstMBI | GATC | 3 cut(s) | 58, 117, 147 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 149, 365 |
| BstNI | CCWGG | 1 cut(s) | 145 |
| BstSCI | CCNGG | 3 cut(s) | 53, 143, 211 |
| BstUI | CGCG | 1 cut(s) | 92 |
| BstV1I | GCAGC | 2 cut(s) | 15, 188 |
| BstV2I | GAAGAC | 1 cut(s) | 471 |
| BstX2I | RGATCY | 1 cut(s) | 58 |
| BstYI | RGATCY | 1 cut(s) | 58 |
| BsuRI | GGCC | 2 cut(s) | 114, 383 |
| BtsCI | GGATG | 3 cut(s) | 32, 96, 384 |
| BtsI | GCAGTG | 1 cut(s) | 15 |
| BtsIMutI | CAGTG | 3 cut(s) | 15, 72, 153 |
| CfoI | GCGC | 1 cut(s) | 92 |
| Cfr13I | GGNCC | 3 cut(s) | 51, 78, 113 |
| CpoI | CGGWCCG | 1 cut(s) | 51 |
| CseI | GACGC | 2 cut(s) | 13, 81 |
| CspI | CGGWCCG | 1 cut(s) | 51 |
| CviAII | CATG | 3 cut(s) | 136, 306, 326 |
| CviJI | RGCY | 9 cut(s) | 12, 114, 143, 179, 287, 333, 353, 359, 383 |
| CviKI_1 | RGCY | 9 cut(s) | 12, 114, 143, 179, 287, 333, 353, 359, 383 |
| DdeI | CTNAG | 2 cut(s) | 354, 472 |
| DpnI | GATC | 3 cut(s) | 60, 119, 149 |
| DpnII | GATC | 3 cut(s) | 58, 117, 147 |
| EaeI | YGGCCR | 1 cut(s) | 381 |
| Eam1104I | CTCTTC | 1 cut(s) | 293 |
| EarI | CTCTTC | 1 cut(s) | 293 |
| Eco47I | GGWCC | 2 cut(s) | 51, 78 |
| Eco57I | CTGAAG | 1 cut(s) | 369 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 327 |
| EcoRII | CCWGG | 1 cut(s) | 143 |
| FaeI | CATG | 3 cut(s) | 139, 309, 329 |
| FaiI | YATR | 3 cut(s) | 137, 307, 327 |
| FaqI | GGGAC | 1 cut(s) | 91 |
| FatI | CATG | 3 cut(s) | 135, 305, 325 |
| Fnu4HI | GCNGC | 3 cut(s) | 26, 29, 177 |
| FokI | GGATG | 3 cut(s) | 19, 83, 371 |
| Fsp4HI | GCNGC | 3 cut(s) | 26, 29, 177 |
| GlaI | GCGC | 1 cut(s) | 91 |
| GluI | GCNGC | 3 cut(s) | 26, 29, 177 |
| GsuI | CTGGAG | 2 cut(s) | 309, 475 |
| HaeIII | GGCC | 2 cut(s) | 114, 383 |
| HapII | CCGG | 3 cut(s) | 49, 54, 213 |
| HgaI | GACGC | 2 cut(s) | 13, 81 |
| HhaI | GCGC | 1 cut(s) | 92 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin1II | CATG | 3 cut(s) | 139, 309, 329 |
| Hin6I | GCGC | 1 cut(s) | 90 |
| HinP1I | GCGC | 1 cut(s) | 90 |
| HinfI | GANTC | 2 cut(s) | 216, 422 |
| HpaII | CCGG | 3 cut(s) | 49, 54, 213 |
| HphI | GGTGA | 3 cut(s) | 95, 448, 473 |
| Hpy188I | TCNGA | 4 cut(s) | 40, 250, 349, 475 |
| Hpy188III | TCNNGA | 1 cut(s) | 278 |
| HpyAV | CCTTC | 1 cut(s) | 110 |
| HpyCH4IV | ACGT | 2 cut(s) | 159, 313 |
| HpyCH4V | TGCA | 3 cut(s) | 20, 68, 305 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 149, 365 |
| HpyF3I | CTNAG | 2 cut(s) | 354, 472 |
| HpySE526I | ACGT | 2 cut(s) | 159, 313 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Hsp92II | CATG | 3 cut(s) | 139, 309, 329 |
| HspAI | GCGC | 1 cut(s) | 90 |
| Kzo9I | GATC | 3 cut(s) | 58, 117, 147 |
| Lsp1109I | GCAGC | 2 cut(s) | 15, 188 |
| MaeII | ACGT | 2 cut(s) | 159, 313 |
| MaeIII | GTNAC | 2 cut(s) | 309, 372 |
| MalI | GATC | 3 cut(s) | 60, 119, 149 |
| MboI | GATC | 3 cut(s) | 58, 117, 147 |
| MboII | GAAGA | 3 cut(s) | 247, 310, 476 |
| MflI | RGATCY | 1 cut(s) | 58 |
| MlsI | TGGCCA | 1 cut(s) | 383 |
| MluNI | TGGCCA | 1 cut(s) | 383 |
| MlyI | GAGTC | 1 cut(s) | 225 |
| MmeI | TCCRAC | 1 cut(s) | 209 |
| MnlI | CCTC | 7 cut(s) | 46, 251, 277, 284, 333, 349, 397 |
| Mox20I | TGGCCA | 1 cut(s) | 383 |
| MscI | TGGCCA | 1 cut(s) | 383 |
| MseI | TTAA | 1 cut(s) | 449 |
| MslI | CAYNNNNRTG | 1 cut(s) | 434 |
| Msp20I | TGGCCA | 1 cut(s) | 383 |
| MspA1I | CMGCKG | 1 cut(s) | 28 |
| MspI | CCGG | 3 cut(s) | 49, 54, 213 |
| MspR9I | CCNGG | 3 cut(s) | 55, 145, 213 |
| MvaI | CCWGG | 1 cut(s) | 145 |
| MvnI | CGCG | 1 cut(s) | 92 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 149, 365 |
| NciI | CCSGG | 2 cut(s) | 55, 213 |
| NdeII | GATC | 3 cut(s) | 58, 117, 147 |
| NlaIII | CATG | 3 cut(s) | 139, 309, 329 |
| NlaIV | GGNNCC | 2 cut(s) | 60, 79 |
| NmeAIII | GCCGAG | 1 cut(s) | 33 |
| NmuCI | GTSAC | 1 cut(s) | 309 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 156 |
| PfeI | GAWTC | 1 cut(s) | 422 |
| PkrI | GCNGC | 3 cut(s) | 27, 30, 178 |
| PleI | GAGTC | 1 cut(s) | 224 |
| PpsI | GAGTC | 1 cut(s) | 224 |
| Psp6I | CCWGG | 1 cut(s) | 143 |
| PspGI | CCWGG | 1 cut(s) | 143 |
| PspN4I | GGNNCC | 2 cut(s) | 60, 79 |
| PspPI | GGNCC | 3 cut(s) | 51, 78, 113 |
| PsuI | RGATCY | 1 cut(s) | 58 |
| RseI | CAYNNNNRTG | 1 cut(s) | 434 |
| Rsr2I | CGGWCCG | 1 cut(s) | 51 |
| RsrII | CGGWCCG | 1 cut(s) | 51 |
| SaqAI | TTAA | 1 cut(s) | 449 |
| SatI | GCNGC | 3 cut(s) | 26, 29, 177 |
| Sau3AI | GATC | 3 cut(s) | 58, 117, 147 |
| Sau96I | GGNCC | 3 cut(s) | 51, 78, 113 |
| SchI | GAGTC | 1 cut(s) | 225 |
| ScrFI | CCNGG | 3 cut(s) | 55, 145, 213 |
| SetI | ASST | 6 cut(s) | 162, 181, 295, 316, 355, 408 |
| SinI | GGWCC | 2 cut(s) | 51, 78 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 434 |
| SsiI | CCGC | 2 cut(s) | 23, 26 |
| SspI | AATATT | 1 cut(s) | 442 |
| StyD4I | CCNGG | 3 cut(s) | 53, 143, 211 |
| TaiI | ACGT | 2 cut(s) | 162, 316 |
| TaqI | TCGA | 2 cut(s) | 128, 219 |
| TauI | GCSGC | 1 cut(s) | 28 |
| TfiI | GAWTC | 1 cut(s) | 422 |
| Tru1I | TTAA | 1 cut(s) | 449 |
| Tru9I | TTAA | 1 cut(s) | 449 |
| TscAI | CASTG | 3 cut(s) | 22, 79, 160 |
| TseFI | GTSAC | 1 cut(s) | 309 |
| TseI | GCWGC | 2 cut(s) | 28, 176 |
| Tsp45I | GTSAC | 1 cut(s) | 309 |
| TspDTI | ATGAA | 1 cut(s) | 332 |
| TspRI | CASTG | 3 cut(s) | 22, 79, 160 |
| VpaK11BI | GGWCC | 2 cut(s) | 51, 78 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 327 |