Ribonuclease H
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 204 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 20 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 83, 115 |
| AluBI | AGCT | 5 cut(s) | 49, 108, 136, 179, 343 |
| AluI | AGCT | 5 cut(s) | 49, 108, 136, 179, 343 |
| Alw26I | GTCTC | 1 cut(s) | 51 |
| AoxI | GGCC | 3 cut(s) | 142, 336, 355 |
| ApeKI | GCWGC | 1 cut(s) | 343 |
| ApoI | RAATTY | 1 cut(s) | 204 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 325 |
| AspS9I | GGNCC | 1 cut(s) | 336 |
| AsuHPI | GGTGA | 2 cut(s) | 83, 386 |
| BbvI | GCAGC | 1 cut(s) | 330 |
| BccI | CCATC | 2 cut(s) | 245, 371 |
| BciVI | GTATCC | 1 cut(s) | 106 |
| BcoDI | GTCTC | 1 cut(s) | 51 |
| BfaI | CTAG | 2 cut(s) | 12, 309 |
| BfuI | GTATCC | 1 cut(s) | 106 |
| BisI | GCNGC | 1 cut(s) | 344 |
| BlsI | GCNGC | 1 cut(s) | 345 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 20 |
| BmgT120I | GGNCC | 1 cut(s) | 336 |
| BmiI | GGNNCC | 1 cut(s) | 337 |
| BpmI | CTGGAG | 1 cut(s) | 337 |
| BsaJI | CCNNGG | 1 cut(s) | 145 |
| Bse1I | ACTGG | 1 cut(s) | 195 |
| BseDI | CCNNGG | 1 cut(s) | 145 |
| BseNI | ACTGG | 1 cut(s) | 195 |
| BseRI | GAGGAG | 1 cut(s) | 285 |
| BseXI | GCAGC | 1 cut(s) | 330 |
| BseYI | CCCAGC | 1 cut(s) | 108 |
| BshFI | GGCC | 3 cut(s) | 144, 338, 357 |
| BsmAI | GTCTC | 1 cut(s) | 51 |
| BsnI | GGCC | 3 cut(s) | 144, 338, 357 |
| BspANI | GGCC | 3 cut(s) | 144, 338, 357 |
| BspLI | GGNNCC | 1 cut(s) | 337 |
| BsrI | ACTGG | 1 cut(s) | 195 |
| BssECI | CCNNGG | 1 cut(s) | 145 |
| BssT1I | CCWWGG | 1 cut(s) | 145 |
| BstC8I | GCNNGC | 2 cut(s) | 186, 213 |
| BstDEI | CTNAG | 1 cut(s) | 347 |
| BstMAI | GTCTC | 1 cut(s) | 51 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 185 |
| BstV1I | GCAGC | 1 cut(s) | 330 |
| BsuI | GTATCC | 1 cut(s) | 106 |
| BsuRI | GGCC | 3 cut(s) | 144, 338, 357 |
| Cac8I | GCNNGC | 2 cut(s) | 186, 213 |
| Cfr13I | GGNCC | 1 cut(s) | 336 |
| CviAII | CATG | 1 cut(s) | 332 |
| DdeI | CTNAG | 1 cut(s) | 347 |
| DriI | GACNNNNNGTC | 1 cut(s) | 20 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 20 |
| Eco130I | CCWWGG | 1 cut(s) | 145 |
| Eco147I | AGGCCT | 2 cut(s) | 144, 357 |
| EcoT14I | CCWWGG | 1 cut(s) | 145 |
| ErhI | CCWWGG | 1 cut(s) | 145 |
| FaeI | CATG | 1 cut(s) | 335 |
| FaiI | YATR | 7 cut(s) | 65, 67, 182, 243, 255, 257, 333 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 168, 200 |
| FatI | CATG | 1 cut(s) | 331 |
| FauNDI | CATATG | 1 cut(s) | 65 |
| Fnu4HI | GCNGC | 1 cut(s) | 344 |
| Fsp4HI | GCNGC | 1 cut(s) | 344 |
| FspBI | CTAG | 2 cut(s) | 12, 309 |
| GluI | GCNGC | 1 cut(s) | 344 |
| GsaI | CCCAGC | 1 cut(s) | 112 |
| GsuI | CTGGAG | 1 cut(s) | 337 |
| HaeIII | GGCC | 3 cut(s) | 144, 338, 357 |
| Hin1II | CATG | 1 cut(s) | 335 |
| HincII | GTYRAC | 1 cut(s) | 125 |
| HindII | GTYRAC | 1 cut(s) | 125 |
| HphI | GGTGA | 2 cut(s) | 83, 386 |
| Hpy166II | GTNNAC | 2 cut(s) | 97, 125 |
| Hpy188I | TCNGA | 1 cut(s) | 166 |
| Hpy188III | TCNNGA | 3 cut(s) | 154, 299, 316 |
| Hpy8I | GTNNAC | 2 cut(s) | 97, 125 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 188 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 185 |
| HpyF3I | CTNAG | 1 cut(s) | 347 |
| Hsp92II | CATG | 1 cut(s) | 335 |
| LpnPI | CCDG | 7 cut(s) | 33, 94, 197, 207, 208, 284, 301 |
| Lsp1109I | GCAGC | 1 cut(s) | 330 |
| MaeI | CTAG | 2 cut(s) | 12, 309 |
| MaeIII | GTNAC | 2 cut(s) | 32, 71 |
| MluCI | AATT | 3 cut(s) | 38, 204, 283 |
| MmeI | TCCRAC | 1 cut(s) | 179 |
| MnlI | CCTC | 5 cut(s) | 134, 172, 303, 306, 368 |
| MroXI | GAANNNNTTC | 1 cut(s) | 325 |
| MseI | TTAA | 2 cut(s) | 272, 390 |
| MspA1I | CMGCKG | 1 cut(s) | 108 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 185 |
| NdeI | CATATG | 1 cut(s) | 65 |
| NlaIII | CATG | 1 cut(s) | 335 |
| NlaIV | GGNNCC | 1 cut(s) | 337 |
| NmeAIII | GCCGAG | 1 cut(s) | 364 |
| NmuCI | GTSAC | 2 cut(s) | 32, 71 |
| PceI | AGGCCT | 2 cut(s) | 144, 357 |
| PdmI | GAANNNNTTC | 1 cut(s) | 325 |
| PkrI | GCNGC | 1 cut(s) | 345 |
| PspFI | CCCAGC | 1 cut(s) | 108 |
| PspN4I | GGNNCC | 1 cut(s) | 337 |
| PspPI | GGNCC | 1 cut(s) | 336 |
| PvuII | CAGCTG | 1 cut(s) | 108 |
| SaqAI | TTAA | 2 cut(s) | 272, 390 |
| SatI | GCNGC | 1 cut(s) | 344 |
| Sau96I | GGNCC | 1 cut(s) | 336 |
| SetI | ASST | 9 cut(s) | 22, 51, 110, 130, 138, 164, 181, 345, 376 |
| Sse9I | AATT | 3 cut(s) | 38, 204, 283 |
| SseBI | AGGCCT | 2 cut(s) | 144, 357 |
| SspMI | CTAG | 2 cut(s) | 12, 309 |
| StuI | AGGCCT | 2 cut(s) | 144, 357 |
| StyI | CCWWGG | 1 cut(s) | 145 |
| TasI | AATT | 3 cut(s) | 38, 204, 283 |
| Tru1I | TTAA | 2 cut(s) | 272, 390 |
| Tru9I | TTAA | 2 cut(s) | 272, 390 |
| TseFI | GTSAC | 2 cut(s) | 32, 71 |
| TseI | GCWGC | 1 cut(s) | 343 |
| Tsp45I | GTSAC | 2 cut(s) | 32, 71 |
| TspDTI | ATGAA | 2 cut(s) | 52, 185 |
| XapI | RAATTY | 1 cut(s) | 204 |
| XmnI | GAANNNNTTC | 1 cut(s) | 325 |
| XspI | CTAG | 2 cut(s) | 12, 309 |