Domain of unknown function (DUF4283)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 74 - 190 | 2.4e-20 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 212 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 183 |
| AccIII | TCCGGA | 1 cut(s) | 143 |
| AciI | CCGC | 1 cut(s) | 296 |
| AclWI | GGATC | 2 cut(s) | 16, 439 |
| AcoI | YGGCCR | 1 cut(s) | 232 |
| AcsI | RAATTY | 2 cut(s) | 50, 218 |
| AcuI | CTGAAG | 2 cut(s) | 183, 505 |
| AfaI | GTAC | 1 cut(s) | 319 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 147, 183, 295, 591 |
| AflIII | ACRYGT | 2 cut(s) | 391, 526 |
| AgsI | TTSAA | 3 cut(s) | 50, 414, 479 |
| AleI | CACNNNNGTG | 1 cut(s) | 179 |
| AluBI | AGCT | 6 cut(s) | 98, 243, 335, 493, 542, 554 |
| AluI | AGCT | 6 cut(s) | 98, 243, 335, 493, 542, 554 |
| Alw21I | GWGCWC | 1 cut(s) | 373 |
| Alw44I | GTGCAC | 1 cut(s) | 369 |
| AlwI | GGATC | 2 cut(s) | 16, 439 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 335 |
| Aor13HI | TCCGGA | 1 cut(s) | 143 |
| AoxI | GGCC | 1 cut(s) | 232 |
| ApaLI | GTGCAC | 1 cut(s) | 369 |
| ApeKI | GCWGC | 2 cut(s) | 95, 104 |
| ApoI | RAATTY | 2 cut(s) | 50, 218 |
| AsuNHI | GCTAGC | 1 cut(s) | 493 |
| BaeGI | GKGCMC | 1 cut(s) | 373 |
| BalI | TGGCCA | 1 cut(s) | 234 |
| BauI | CACGAG | 3 cut(s) | 419, 598, 641 |
| Bbv12I | GWGCWC | 1 cut(s) | 373 |
| BbvCI | CCTCAGC | 1 cut(s) | 336 |
| BbvI | GCAGC | 2 cut(s) | 91, 107 |
| BccI | CCATC | 3 cut(s) | 122, 173, 218 |
| BceAI | ACGGC | 1 cut(s) | 117 |
| BfaI | CTAG | 2 cut(s) | 366, 494 |
| BfmI | CTRYAG | 1 cut(s) | 321 |
| BisI | GCNGC | 3 cut(s) | 96, 105, 297 |
| BlsI | GCNGC | 3 cut(s) | 97, 106, 298 |
| BmcAI | AGTACT | 1 cut(s) | 319 |
| BmsI | GCATC | 2 cut(s) | 418, 547 |
| BmtI | GCTAGC | 1 cut(s) | 497 |
| Bpu10I | CCTNAGC | 1 cut(s) | 336 |
| BpuEI | CTTGAG | 1 cut(s) | 370 |
| BsaBI | GATNNNNATC | 2 cut(s) | 282, 414 |
| BsaJI | CCNNGG | 1 cut(s) | 455 |
| BsaWI | WCCGGW | 1 cut(s) | 143 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 147, 183, 295, 591 |
| Bse1I | ACTGG | 1 cut(s) | 329 |
| Bse3DI | GCAATG | 1 cut(s) | 56 |
| Bse8I | GATNNNNATC | 2 cut(s) | 282, 414 |
| BseAI | TCCGGA | 1 cut(s) | 143 |
| BseDI | CCNNGG | 1 cut(s) | 455 |
| BseJI | GATNNNNATC | 2 cut(s) | 282, 414 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 147, 183, 295, 591 |
| BseMI | GCAATG | 1 cut(s) | 56 |
| BseMII | CTCAG | 2 cut(s) | 99, 327 |
| BseNI | ACTGG | 1 cut(s) | 329 |
| BseSI | GKGCMC | 1 cut(s) | 373 |
| BseXI | GCAGC | 2 cut(s) | 91, 107 |
| BshFI | GGCC | 1 cut(s) | 234 |
| BsiHKAI | GWGCWC | 1 cut(s) | 373 |
| BsiSI | CCGG | 1 cut(s) | 144 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 147, 183, 295, 591 |
| BsnI | GGCC | 1 cut(s) | 234 |
| Bsp1286I | GDGCHC | 1 cut(s) | 373 |
| Bsp13I | TCCGGA | 1 cut(s) | 143 |
| Bsp143I | GATC | 2 cut(s) | 8, 444 |
| BspACI | CCGC | 1 cut(s) | 296 |
| BspANI | GGCC | 1 cut(s) | 234 |
| BspCNI | CTCAG | 2 cut(s) | 98, 328 |
| BspEI | TCCGGA | 1 cut(s) | 143 |
| BspOI | GCTAGC | 1 cut(s) | 497 |
| BspPI | GGATC | 2 cut(s) | 16, 439 |
| BsrDI | GCAATG | 1 cut(s) | 56 |
| BsrI | ACTGG | 1 cut(s) | 329 |
| BssECI | CCNNGG | 1 cut(s) | 455 |
| BssMI | GATC | 2 cut(s) | 8, 444 |
| BssSI | CACGAG | 3 cut(s) | 419, 598, 641 |
| BssT1I | CCWWGG | 1 cut(s) | 455 |
| Bst2BI | CACGAG | 3 cut(s) | 419, 598, 641 |
| Bst4CI | ACNGT | 1 cut(s) | 206 |
| BstC8I | GCNNGC | 2 cut(s) | 495, 579 |
| BstDEI | CTNAG | 2 cut(s) | 85, 336 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 589 |
| BstKTI | GATC | 2 cut(s) | 11, 447 |
| BstMBI | GATC | 2 cut(s) | 8, 444 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 101, 104, 240 |
| BstNSI | RCATGY | 3 cut(s) | 395, 530, 581 |
| BstSFI | CTRYAG | 1 cut(s) | 321 |
| BstSLI | GKGCMC | 1 cut(s) | 373 |
| BstV1I | GCAGC | 2 cut(s) | 91, 107 |
| BstX2I | RGATCY | 1 cut(s) | 8 |
| BstYI | RGATCY | 1 cut(s) | 8 |
| BsuRI | GGCC | 1 cut(s) | 234 |
| Cac8I | GCNNGC | 2 cut(s) | 495, 579 |
| CaiI | CAGNNNCTG | 1 cut(s) | 335 |
| CseI | GACGC | 1 cut(s) | 615 |
| Csp6I | GTAC | 1 cut(s) | 318 |
| CviAII | CATG | 3 cut(s) | 392, 527, 578 |
| CviQI | GTAC | 1 cut(s) | 318 |
| DdeI | CTNAG | 2 cut(s) | 85, 336 |
| DpnI | GATC | 2 cut(s) | 10, 446 |
| DpnII | GATC | 2 cut(s) | 8, 444 |
| EaeI | YGGCCR | 1 cut(s) | 232 |
| Eco130I | CCWWGG | 1 cut(s) | 455 |
| Eco57I | CTGAAG | 2 cut(s) | 183, 505 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 589 |
| EcoT14I | CCWWGG | 1 cut(s) | 455 |
| ErhI | CCWWGG | 1 cut(s) | 455 |
| FaeI | CATG | 3 cut(s) | 395, 530, 581 |
| FaiI | YATR | 9 cut(s) | 40, 42, 212, 237, 263, 323, 393, 528, 579 |
| FatI | CATG | 3 cut(s) | 391, 526, 577 |
| Fnu4HI | GCNGC | 3 cut(s) | 96, 105, 297 |
| Fsp4HI | GCNGC | 3 cut(s) | 96, 105, 297 |
| FspBI | CTAG | 2 cut(s) | 366, 494 |
| GluI | GCNGC | 3 cut(s) | 96, 105, 297 |
| HaeIII | GGCC | 1 cut(s) | 234 |
| HapII | CCGG | 1 cut(s) | 144 |
| HgaI | GACGC | 1 cut(s) | 615 |
| Hin1II | CATG | 3 cut(s) | 395, 530, 581 |
| HinfI | GANTC | 2 cut(s) | 152, 410 |
| HpaII | CCGG | 1 cut(s) | 144 |
| Hpy166II | GTNNAC | 2 cut(s) | 371, 603 |
| Hpy188I | TCNGA | 4 cut(s) | 8, 202, 524, 618 |
| Hpy188III | TCNNGA | 3 cut(s) | 144, 421, 479 |
| Hpy8I | GTNNAC | 2 cut(s) | 371, 603 |
| HpyAV | CCTTC | 3 cut(s) | 207, 398, 529 |
| HpyCH4III | ACNGT | 1 cut(s) | 206 |
| HpyCH4IV | ACGT | 1 cut(s) | 16 |
| HpyCH4V | TGCA | 4 cut(s) | 56, 371, 431, 560 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 101, 104, 240 |
| HpyF3I | CTNAG | 2 cut(s) | 85, 336 |
| HpySE526I | ACGT | 1 cut(s) | 16 |
| Hsp92II | CATG | 3 cut(s) | 395, 530, 581 |
| Kpn2I | TCCGGA | 1 cut(s) | 143 |
| Kzo9I | GATC | 2 cut(s) | 8, 444 |
| LmnI | GCTCC | 1 cut(s) | 619 |
| LpnPI | CCDG | 5 cut(s) | 157, 216, 342, 514, 577 |
| Lsp1109I | GCAGC | 2 cut(s) | 91, 107 |
| LweI | GCATC | 2 cut(s) | 418, 547 |
| MaeI | CTAG | 2 cut(s) | 366, 494 |
| MaeII | ACGT | 1 cut(s) | 16 |
| MaeIII | GTNAC | 1 cut(s) | 17 |
| MalI | GATC | 2 cut(s) | 10, 446 |
| MboI | GATC | 2 cut(s) | 8, 444 |
| MboII | GAAGA | 1 cut(s) | 147 |
| MflI | RGATCY | 1 cut(s) | 8 |
| MhlI | GDGCHC | 1 cut(s) | 373 |
| MlsI | TGGCCA | 1 cut(s) | 234 |
| MluCI | AATT | 5 cut(s) | 43, 50, 218, 462, 513 |
| MluNI | TGGCCA | 1 cut(s) | 234 |
| MmeI | TCCRAC | 1 cut(s) | 472 |
| MnlI | CCTC | 7 cut(s) | 140, 151, 204, 248, 331, 520, 592 |
| Mox20I | TGGCCA | 1 cut(s) | 234 |
| MroI | TCCGGA | 1 cut(s) | 143 |
| MscI | TGGCCA | 1 cut(s) | 234 |
| MseI | TTAA | 4 cut(s) | 63, 270, 533, 588 |
| MslI | CAYNNNNRTG | 1 cut(s) | 179 |
| Msp20I | TGGCCA | 1 cut(s) | 234 |
| MspI | CCGG | 1 cut(s) | 144 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 101, 104, 240 |
| NdeII | GATC | 2 cut(s) | 8, 444 |
| NheI | GCTAGC | 1 cut(s) | 493 |
| NlaIII | CATG | 3 cut(s) | 395, 530, 581 |
| NspI | RCATGY | 3 cut(s) | 395, 530, 581 |
| OliI | CACNNNNGTG | 1 cut(s) | 179 |
| PaeI | GCATGC | 1 cut(s) | 581 |
| PciI | ACATGT | 2 cut(s) | 391, 526 |
| PfeI | GAWTC | 2 cut(s) | 152, 410 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 183 |
| PkrI | GCNGC | 3 cut(s) | 97, 106, 298 |
| PscI | ACATGT | 2 cut(s) | 391, 526 |
| PsiI | TTATAA | 1 cut(s) | 212 |
| PstNI | CAGNNNCTG | 1 cut(s) | 335 |
| PsuI | RGATCY | 1 cut(s) | 8 |
| RsaI | GTAC | 1 cut(s) | 319 |
| RsaNI | GTAC | 1 cut(s) | 318 |
| RseI | CAYNNNNRTG | 1 cut(s) | 179 |
| SaqAI | TTAA | 4 cut(s) | 63, 270, 533, 588 |
| SatI | GCNGC | 3 cut(s) | 96, 105, 297 |
| Sau3AI | GATC | 2 cut(s) | 8, 444 |
| ScaI | AGTACT | 1 cut(s) | 319 |
| SduI | GDGCHC | 1 cut(s) | 373 |
| SfaNI | GCATC | 2 cut(s) | 418, 547 |
| SfcI | CTRYAG | 1 cut(s) | 321 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 179 |
| SmlI | CTYRAG | 1 cut(s) | 349 |
| SmoI | CTYRAG | 1 cut(s) | 349 |
| SphI | GCATGC | 1 cut(s) | 581 |
| Sse9I | AATT | 5 cut(s) | 43, 50, 218, 462, 513 |
| SsiI | CCGC | 1 cut(s) | 296 |
| SspMI | CTAG | 2 cut(s) | 366, 494 |
| StyI | CCWWGG | 1 cut(s) | 455 |
| TaaI | ACNGT | 1 cut(s) | 206 |
| TaiI | ACGT | 1 cut(s) | 19 |
| TaqI | TCGA | 1 cut(s) | 487 |
| TasI | AATT | 5 cut(s) | 43, 50, 218, 462, 513 |
| TatI | WGTACW | 1 cut(s) | 317 |
| TauI | GCSGC | 1 cut(s) | 299 |
| TfiI | GAWTC | 2 cut(s) | 152, 410 |
| Tru1I | TTAA | 4 cut(s) | 63, 270, 533, 588 |
| Tru9I | TTAA | 4 cut(s) | 63, 270, 533, 588 |
| TseI | GCWGC | 2 cut(s) | 95, 104 |
| TspDTI | ATGAA | 3 cut(s) | 230, 250, 294 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 183 |
| VneI | GTGCAC | 1 cut(s) | 369 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 589 |
| XapI | RAATTY | 2 cut(s) | 50, 218 |
| XceI | RCATGY | 3 cut(s) | 395, 530, 581 |
| XspI | CTAG | 2 cut(s) | 366, 494 |
| ZrmI | AGTACT | 1 cut(s) | 319 |