Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 986 |
| AclWI | GGATC | 2 cut(s) | 31, 937 |
| AcoI | YGGCCR | 1 cut(s) | 115 |
| AcsI | RAATTY | 2 cut(s) | 426, 511 |
| AdeI | CACNNNGTG | 1 cut(s) | 437 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 173, 174, 392, 625 |
| AflII | CTTAAG | 1 cut(s) | 32 |
| AgsI | TTSAA | 7 cut(s) | 307, 378, 411, 563, 809, 899, 1057 |
| AhlI | ACTAGT | 1 cut(s) | 587 |
| AjnI | CCWGG | 2 cut(s) | 179, 259 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 743, 775 |
| AluBI | AGCT | 9 cut(s) | 46, 227, 280, 338, 482, 681, 1016, 1063, 1169 |
| AluI | AGCT | 9 cut(s) | 46, 227, 280, 338, 482, 681, 1016, 1063, 1169 |
| AlwI | GGATC | 2 cut(s) | 31, 937 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 266 |
| AoxI | GGCC | 2 cut(s) | 115, 263 |
| ApeKI | GCWGC | 4 cut(s) | 46, 678, 821, 1016 |
| ApoI | RAATTY | 2 cut(s) | 426, 511 |
| AseI | ATTAAT | 1 cut(s) | 651 |
| AspS9I | GGNCC | 3 cut(s) | 138, 177, 263 |
| AsuHPI | GGTGA | 2 cut(s) | 727, 1168 |
| AvaII | GGWCC | 2 cut(s) | 138, 177 |
| AxyI | CCTNAGG | 1 cut(s) | 624 |
| BalI | TGGCCA | 1 cut(s) | 117 |
| BanI | GGYRCC | 1 cut(s) | 986 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 640, 672 |
| BbsI | GAAGAC | 1 cut(s) | 315 |
| BbvI | GCAGC | 4 cut(s) | 33, 690, 808, 1003 |
| BccI | CCATC | 4 cut(s) | 383, 475, 631, 638 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 33 |
| BciT130I | CCWGG | 2 cut(s) | 181, 261 |
| BcuI | ACTAGT | 1 cut(s) | 587 |
| BfaI | CTAG | 9 cut(s) | 228, 519, 588, 675, 933, 963, 981, 1020, 1180 |
| BfmI | CTRYAG | 3 cut(s) | 333, 477, 1102 |
| BfrI | CTTAAG | 1 cut(s) | 32 |
| BisI | GCNGC | 4 cut(s) | 47, 679, 822, 1017 |
| BlsI | GCNGC | 4 cut(s) | 48, 680, 823, 1018 |
| Bme1390I | CCNGG | 2 cut(s) | 181, 261 |
| Bme18I | GGWCC | 2 cut(s) | 138, 177 |
| BmgT120I | GGNCC | 3 cut(s) | 138, 177, 263 |
| BmiI | GGNNCC | 4 cut(s) | 96, 139, 178, 988 |
| BmrFI | CCNGG | 2 cut(s) | 181, 261 |
| BpiI | GAAGAC | 1 cut(s) | 315 |
| BpmI | CTGGAG | 1 cut(s) | 243 |
| BsaJI | CCNNGG | 3 cut(s) | 260, 938, 1034 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 722, 743, 752, 773 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 173, 174, 392, 625 |
| Bse1I | ACTGG | 1 cut(s) | 665 |
| Bse21I | CCTNAGG | 1 cut(s) | 624 |
| BseBI | CCWGG | 2 cut(s) | 181, 261 |
| BseDI | CCNNGG | 3 cut(s) | 260, 938, 1034 |
| BseGI | GGATG | 1 cut(s) | 649 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 173, 174, 392, 625 |
| BseMII | CTCAG | 4 cut(s) | 425, 615, 693, 921 |
| BseNI | ACTGG | 1 cut(s) | 665 |
| BseRI | GAGGAG | 3 cut(s) | 641, 764, 767 |
| BseXI | GCAGC | 4 cut(s) | 33, 690, 808, 1003 |
| BshFI | GGCC | 2 cut(s) | 117, 265 |
| BshNI | GGYRCC | 1 cut(s) | 986 |
| BslFI | GGGAC | 1 cut(s) | 150 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 173, 174, 392, 625 |
| BsmFI | GGGAC | 1 cut(s) | 150 |
| BsnI | GGCC | 2 cut(s) | 117, 265 |
| Bsp143I | GATC | 3 cut(s) | 36, 439, 929 |
| BspANI | GGCC | 2 cut(s) | 117, 265 |
| BspCNI | CTCAG | 4 cut(s) | 426, 616, 694, 920 |
| BspLI | GGNNCC | 4 cut(s) | 96, 139, 178, 988 |
| BspPI | GGATC | 2 cut(s) | 31, 937 |
| BspT107I | GGYRCC | 1 cut(s) | 986 |
| BspTI | CTTAAG | 1 cut(s) | 32 |
| BsrI | ACTGG | 1 cut(s) | 665 |
| BssECI | CCNNGG | 3 cut(s) | 260, 938, 1034 |
| BssMI | GATC | 3 cut(s) | 36, 439, 929 |
| BssT1I | CCWWGG | 2 cut(s) | 938, 1034 |
| Bst2UI | CCWGG | 2 cut(s) | 181, 261 |
| Bst4CI | ACNGT | 2 cut(s) | 541, 874 |
| Bst6I | CTCTTC | 1 cut(s) | 364 |
| BstAFI | CTTAAG | 1 cut(s) | 32 |
| BstC8I | GCNNGC | 2 cut(s) | 267, 782 |
| BstDEI | CTNAG | 6 cut(s) | 171, 363, 434, 624, 702, 907 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 390 |
| BstF5I | GGATG | 1 cut(s) | 649 |
| BstKTI | GATC | 3 cut(s) | 39, 442, 932 |
| BstMBI | GATC | 3 cut(s) | 36, 439, 929 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 335 |
| BstNI | CCWGG | 2 cut(s) | 181, 261 |
| BstSCI | CCNGG | 2 cut(s) | 179, 259 |
| BstSFI | CTRYAG | 3 cut(s) | 333, 477, 1102 |
| BstV1I | GCAGC | 4 cut(s) | 33, 690, 808, 1003 |
| BstV2I | GAAGAC | 1 cut(s) | 315 |
| BstX2I | RGATCY | 2 cut(s) | 36, 929 |
| BstYI | RGATCY | 2 cut(s) | 36, 929 |
| Bsu36I | CCTNAGG | 1 cut(s) | 624 |
| BsuRI | GGCC | 2 cut(s) | 117, 265 |
| BtsCI | GGATG | 1 cut(s) | 649 |
| BtsI | GCAGTG | 2 cut(s) | 252, 975 |
| BtsIMutI | CAGTG | 4 cut(s) | 216, 252, 431, 975 |
| Cac8I | GCNNGC | 2 cut(s) | 267, 782 |
| CaiI | CAGNNNCTG | 1 cut(s) | 266 |
| Cfr13I | GGNCC | 3 cut(s) | 138, 177, 263 |
| CviAII | CATG | 1 cut(s) | 763 |
| DdeI | CTNAG | 6 cut(s) | 171, 363, 434, 624, 702, 907 |
| DpnI | GATC | 3 cut(s) | 38, 441, 931 |
| DpnII | GATC | 3 cut(s) | 36, 439, 929 |
| DraIII | CACNNNGTG | 1 cut(s) | 437 |
| EaeI | YGGCCR | 1 cut(s) | 115 |
| Eam1104I | CTCTTC | 1 cut(s) | 364 |
| EarI | CTCTTC | 1 cut(s) | 364 |
| Eco130I | CCWWGG | 2 cut(s) | 938, 1034 |
| Eco47I | GGWCC | 2 cut(s) | 138, 177 |
| Eco81I | CCTNAGG | 1 cut(s) | 624 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 390 |
| EcoO109I | RGGNCCY | 1 cut(s) | 263 |
| EcoRI | GAATTC | 2 cut(s) | 426, 511 |
| EcoRII | CCWGG | 2 cut(s) | 179, 259 |
| EcoT14I | CCWWGG | 2 cut(s) | 938, 1034 |
| ErhI | CCWWGG | 2 cut(s) | 938, 1034 |
| FaeI | CATG | 1 cut(s) | 766 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 35, 67 |
| FaqI | GGGAC | 1 cut(s) | 150 |
| FatI | CATG | 1 cut(s) | 762 |
| Fnu4HI | GCNGC | 4 cut(s) | 47, 679, 822, 1017 |
| FokI | GGATG | 1 cut(s) | 656 |
| Fsp4HI | GCNGC | 4 cut(s) | 47, 679, 822, 1017 |
| FspBI | CTAG | 9 cut(s) | 228, 519, 588, 675, 933, 963, 981, 1020, 1180 |
| GluI | GCNGC | 4 cut(s) | 47, 679, 822, 1017 |
| GsuI | CTGGAG | 1 cut(s) | 243 |
| HaeIII | GGCC | 2 cut(s) | 117, 265 |
| Hin1II | CATG | 1 cut(s) | 766 |
| HincII | GTYRAC | 2 cut(s) | 250, 670 |
| HindII | GTYRAC | 2 cut(s) | 250, 670 |
| HindIII | AAGCTT | 1 cut(s) | 278 |
| HinfI | GANTC | 6 cut(s) | 101, 203, 550, 671, 887, 1007 |
| HphI | GGTGA | 2 cut(s) | 727, 1168 |
| Hpy166II | GTNNAC | 3 cut(s) | 250, 670, 886 |
| Hpy188I | TCNGA | 1 cut(s) | 106 |
| Hpy188III | TCNNGA | 4 cut(s) | 74, 296, 386, 623 |
| Hpy8I | GTNNAC | 3 cut(s) | 250, 670, 886 |
| HpyAV | CCTTC | 3 cut(s) | 85, 384, 557 |
| HpyCH4III | ACNGT | 2 cut(s) | 541, 874 |
| HpyCH4V | TGCA | 2 cut(s) | 316, 1120 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 335 |
| HpyF3I | CTNAG | 6 cut(s) | 171, 363, 434, 624, 702, 907 |
| Hsp92II | CATG | 1 cut(s) | 766 |
| Kzo9I | GATC | 3 cut(s) | 36, 439, 929 |
| LmnI | GCTCC | 4 cut(s) | 262, 334, 388, 1166 |
| Lsp1109I | GCAGC | 4 cut(s) | 33, 690, 808, 1003 |
| MaeI | CTAG | 9 cut(s) | 228, 519, 588, 675, 933, 963, 981, 1020, 1180 |
| MaeIII | GTNAC | 7 cut(s) | 27, 418, 715, 868, 942, 971, 998 |
| MalI | GATC | 3 cut(s) | 38, 441, 931 |
| MboI | GATC | 3 cut(s) | 36, 439, 929 |
| MboII | GAAGA | 5 cut(s) | 142, 315, 319, 351, 648 |
| MflI | RGATCY | 2 cut(s) | 36, 929 |
| MlsI | TGGCCA | 1 cut(s) | 117 |
| MluCI | AATT | 7 cut(s) | 426, 511, 574, 652, 1023, 1083, 1146 |
| MluNI | TGGCCA | 1 cut(s) | 117 |
| MlyI | GAGTC | 3 cut(s) | 212, 665, 881 |
| Mox20I | TGGCCA | 1 cut(s) | 117 |
| MscI | TGGCCA | 1 cut(s) | 117 |
| MseI | TTAA | 3 cut(s) | 33, 651, 1145 |
| MslI | CAYNNNNRTG | 1 cut(s) | 459 |
| Msp20I | TGGCCA | 1 cut(s) | 117 |
| MspCI | CTTAAG | 1 cut(s) | 32 |
| MspR9I | CCNGG | 2 cut(s) | 181, 261 |
| MvaI | CCWGG | 2 cut(s) | 181, 261 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 335 |
| NdeII | GATC | 3 cut(s) | 36, 439, 929 |
| NlaIII | CATG | 1 cut(s) | 766 |
| NlaIV | GGNNCC | 4 cut(s) | 96, 139, 178, 988 |
| NmuCI | GTSAC | 2 cut(s) | 27, 715 |
| PfeI | GAWTC | 3 cut(s) | 101, 550, 1007 |
| PkrI | GCNGC | 4 cut(s) | 48, 680, 823, 1018 |
| PleI | GAGTC | 3 cut(s) | 211, 665, 881 |
| PpsI | GAGTC | 3 cut(s) | 211, 665, 881 |
| PshBI | ATTAAT | 1 cut(s) | 651 |
| Psp6I | CCWGG | 2 cut(s) | 179, 259 |
| PspGI | CCWGG | 2 cut(s) | 179, 259 |
| PspN4I | GGNNCC | 4 cut(s) | 96, 139, 178, 988 |
| PspPI | GGNCC | 3 cut(s) | 138, 177, 263 |
| PstNI | CAGNNNCTG | 1 cut(s) | 266 |
| PsuI | RGATCY | 2 cut(s) | 36, 929 |
| RseI | CAYNNNNRTG | 1 cut(s) | 459 |
| SaqAI | TTAA | 3 cut(s) | 33, 651, 1145 |
| SatI | GCNGC | 4 cut(s) | 47, 679, 822, 1017 |
| Sau3AI | GATC | 3 cut(s) | 36, 439, 929 |
| Sau96I | GGNCC | 3 cut(s) | 138, 177, 263 |
| SchI | GAGTC | 3 cut(s) | 212, 665, 881 |
| ScrFI | CCNGG | 2 cut(s) | 181, 261 |
| SfcI | CTRYAG | 3 cut(s) | 333, 477, 1102 |
| SinI | GGWCC | 2 cut(s) | 138, 177 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 459 |
| SmlI | CTYRAG | 1 cut(s) | 32 |
| SmoI | CTYRAG | 1 cut(s) | 32 |
| SpeI | ACTAGT | 1 cut(s) | 587 |
| Sse9I | AATT | 7 cut(s) | 426, 511, 574, 652, 1023, 1083, 1146 |
| SspMI | CTAG | 9 cut(s) | 228, 519, 588, 675, 933, 963, 981, 1020, 1180 |
| StyD4I | CCNGG | 2 cut(s) | 179, 259 |
| StyI | CCWWGG | 2 cut(s) | 938, 1034 |
| TaaI | ACNGT | 2 cut(s) | 541, 874 |
| TaqI | TCGA | 2 cut(s) | 19, 424 |
| TasI | AATT | 7 cut(s) | 426, 511, 574, 652, 1023, 1083, 1146 |
| TfiI | GAWTC | 3 cut(s) | 101, 550, 1007 |
| Tru1I | TTAA | 3 cut(s) | 33, 651, 1145 |
| Tru9I | TTAA | 3 cut(s) | 33, 651, 1145 |
| TscAI | CASTG | 4 cut(s) | 223, 259, 438, 982 |
| TseFI | GTSAC | 2 cut(s) | 27, 715 |
| TseI | GCWGC | 4 cut(s) | 46, 678, 821, 1016 |
| Tsp45I | GTSAC | 2 cut(s) | 27, 715 |
| TspDTI | ATGAA | 3 cut(s) | 237, 524, 751 |
| TspGWI | ACGGA | 1 cut(s) | 29 |
| TspRI | CASTG | 4 cut(s) | 223, 259, 438, 982 |
| Vha464I | CTTAAG | 1 cut(s) | 32 |
| VpaK11BI | GGWCC | 2 cut(s) | 138, 177 |
| VspI | ATTAAT | 1 cut(s) | 651 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 390 |
| XapI | RAATTY | 2 cut(s) | 426, 511 |
| XspI | CTAG | 9 cut(s) | 228, 519, 588, 675, 933, 963, 981, 1020, 1180 |