RchiOBHm_Chr6g0291741

acid phosphatase activity

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
54783936 .. 54787244
3309 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26177

Sequence Viewer

Length: 2637 bp
ATGTTTTGGCAACAAAAAGCAAGAGTAAAGTGGTTGCAGGAGGGAGACAAAAATTCTAAATTCTTCCAATTAACAACCATGGTTAGAAGGAGAAGAAACAAAATTGAAGGGTTATTTGATGAACAAGGGAAATTATGCTCGGATGCTGAGACTATGAGAAACATTGCTGCAAAATACTTTGAAGACCTATTTGCTTATCATAGAAGTGATGACTCCAGATTTGTTATTCCTTATTTATTCCCTCAGCTTTCTAGAAGTGAGACCAGCTGGATGCAGAGAGATGTTACTAACGTTGAAGTTAAAACTGCTGTGTTTGGTATTGGAAGCCTCAAGGCACCTGGAGCTGATGGTTACCCTTCAATTTTTTACCAAAAACACTGGGGTCTCTGTGCAAATGAAGTGTGTAGTTTTATTCAGTCAATCTTCTCATCAGTGCTGCATAAATTCAAGAACTCGAAAGGTAGGAAGGGCTTCTTTGCATGGAAGATTGACTTATCCAAGGCCTATGATAGATTGAACTGGAATTTTATTGAGCATGTTTTATATGAGGCTAACTTTCCAGATAGTATGGTGAAAATCATTATGGAATGTGTTACATCCACAAGCTTCCAAGTTTGCGTAAATGGAGAACTGTCTACTACCTTTAGAGCAGGAAGAGGTCTACGACAAGGTGATCCGCTATCCCCTTATTTGTTTGTCCTTTGTATGGAAAAGCTTTCACACCTAATTAATTCTGCCATTGAAGTTGGGGAATGGAAACCTGTTAGAGCCTCTGGTTCTGGACCCTATATATCACATTTTTTCTTTGCAGATGATCTAATTCTCTTTTCTGAAGCTAATACTCATCAAGCAAGTATTCTGAAACAGTGCTTAGAAGTATTCTGCGTTCTATCTGGACAAACAGTTAATTTTGACAAGTCCCTGATTTTTTGTTCTCCTAATGTTGGCAATGATTTGGCTGGCGATATCAGTAGACTTTGTGGTTCAGTCTTAACAAAGAATATGGGGAAGTATTTAGGCATGCCTCTGATACATTCAAGAATTACTAAACACACTTATGCTAGCATTGTTGATAAAGTGCAGGGAAGGCTAGCTGGGTGGAAGTGTAATACTCTGAGCATTGCGGGAAGACTTACGCTGATTCAATCTGTCACCTCATCCATAGCTATCTATGCCCTGCAAACTGCCAAGTTGCCTAACTCGATCTGGTCATCTCTGGATAAGTTAAATCGTTATTTTTTATGGGGTGATTGCAATGGAAAGAAAAAAGTGCATCTAATTCGATGGGATATGATCTGCAAACCCAAGGAGTTTGGTGGATTAGGCATTAAATCTACTACTCACATGAACCAAGCAATGTTAGCTAAGGCTAGTTGGAGGCTTATTCAACGTGAAAATGGTTTATGGAGTAGAGTATTGCAGAAAAAGTATTTGAAGCATGGAAACCTTTTGACAAATGGGTACAAGAAACCTCATCGATGTTCTAGCACATGGAGAAGCATACTTTTTGGAGCTGAACTTGTTAAAAAAGGAATTATATGGAGAATTGGTCATGGTAATTCTATTAAGTTTTGGACTGATCATTGGTTGAAGAATGGTCCCCTGATTAACCTCGCTAGAACTACTGAGAACATTGATTTTAATATCTCTGTTAGGGATAGCTGGACCAATGGAGGATGGAATATTAGCTTCCTGGAACAATTTTTTGAAGAAGATATTATCAATAAAATTTTGAGTATGCCTGTGGGTTTTGCTGGTGGTGATGATGATAAGATTATCTGGAGTGGAACATCTAACGGCCATTTTTCAGTAAAATCTGCTTACTTATCCCTCTTTGATGAGGAGAACGCTGACTTTTGTTGGAAGTTCTTGTGGAGATTGTGTATGCCCCCTAAGCTAAAAATTTTCTTCTGGTTGATTGTTCAGGGTAAGCTCCTCACTAATGCTGAAAGGATGAAAAGAAGGTCTACAAGAGATGAGTTCTGCCCTATTTGTCATCTTGATTGGGTAGGCTGGTTAGCTGCCAATGGTCACTGTTCTATGAAGTGTTATGGGGAAGGATTCCAGTTTCCTATTAATCCAACTAAAATAATCATTGAAAGTGCTACCGAATGGTTTCTTTCCCAAGAGAAGAAGAACGTAGTGAATGAACAAGCTTCTGTGGCTCTGAAATGGCTGAAACCTGCTAATGGATGGGTCAAACTGAATGTGGATGGTGCTAGATCCAATCTTCATGGAAATATTGGAGCTGGAGGGGTTATTAGAGATCAGTTTGGAAATTGGATAAATGGTTTTTTGGCTCATTTTGGGCATGGTGAAGTTTTGGAAGCTGAGGCATGGGGTATGCGTCTTGGATTAAAACTGGCGGCTGATATTGGCATGGACAAAGTGGTTGTGGAATGTGATTCTAAAGTCTTGGTTAACTTGGTGAATAATGGGGTGGATGAGCTGTGCCCTTTGAAGACTGTGATTGATTATTGTCTTCACCTTCAGGCTGGTTTTTCAGAGTGTATTATCAGCCATGTGTTTCGGGAAGTTAATACGGTTGCTGATGCACTATCAAGATGCAATTTACTGCTGAGATTGGTACCATCTACTTTGAGCAACCTCCTCCACAGATCACTAGTTTTTTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

878

Amino Acids

99.61

Weight (kDa)

9.11

Isoelectric Point (pI)

31.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_1 PF00078 154 - 342 7e-20 Reverse transcriptase (RNA-dependent DNA polymerase)
zf-RVT PF13966 602 - 667 7.4e-12 zinc-binding in reverse transcriptase
RVT_3 PF13456 736 - 854 1.3e-23 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01050
fragaria_vesca FvH4_1g24181 FvH4_1g28741 FvH4_1g29781 FvH4_2g00621 FvH4_2g04885 FvH4_2g11953 FvH4_2g11954 FvH4_2g12001 FvH4_2g12002 FvH4_2g12222 FvH4_2g12223 FvH4_2g38351 FvH4_3g04401 FvH4_3g31330 FvH4_3g33091 FvH4_4g11461 FvH4_5g27993 FvH4_5g27994 FvH4_5g28072 FvH4_5g28231 FvH4_5g28591 FvH4_5g34261 FvH4_6g18162 FvH4_6g25500 FvH4_6g25561 FvH4_6g25792 FvH4_6g27602 FvH4_6g46881
malus_domestica MD03G1019700.v1.1
prunus_persica Prupe.1G055400_v2.0.a1 Prupe.1G179200_v2.0.a1 Prupe.1G208200_v2.0.a1 Prupe.1G231200_v2.0.a1 Prupe.2G044900_v2.0.a1 Prupe.2G055100_v2.0.a1 Prupe.2G097600_v2.0.a1 Prupe.2G114200_v2.0.a1 Prupe.3G109000_v2.0.a1 Prupe.3G109300_v2.0.a1 Prupe.3G109600_v2.0.a1 Prupe.4G246900_v2.0.a1 Prupe.5G026400_v2.0.a1
pyrus_communis pycom05g17130 pycom07g06820 pycom07g18590 pycom07g22730 pycom12401g00120 pycom12401g00180 pycom420g00470
rosa_chinensis RchiOBHm_Chr1g0342591 RchiOBHm_Chr1g0342601 RchiOBHm_Chr1g0342611 RchiOBHm_Chr1g0351011 RchiOBHm_Chr2g0146151 RchiOBHm_Chr2g0171821 RchiOBHm_Chr3g0492921 RchiOBHm_Chr3g0492931 RchiOBHm_Chr4g0406871 RchiOBHm_Chr4g0426311 RchiOBHm_Chr5g0020721 RchiOBHm_Chr5g0050111 RchiOBHm_Chr5g0051681 RchiOBHm_Chr5g0053531 RchiOBHm_Chr5g0054841 RchiOBHm_Chr5g0055061 RchiOBHm_Chr5g0055071 RchiOBHm_Chr6g0248911 RchiOBHm_Chr6g0291741 RchiOBHm_Chr7g0187781 RchiOBHm_Chr7g0220081 RchiOBHm_Chr7g0224391 RchiOBHm_Chr7g0235221
rosa_laevigata RLG00000002133 RLG00000002402 RLG00000002736 RLG00000011046 RLG00000013214 RLG00000016550 RLG00000021669 RLG00000022948 RLG00000023691 RLG00000024682 RLG00000027826 RLG00000029734 RLG00000029831 RLG00000030305 RLG00000037042
rosa_multiflora Rmu_co7992532.1_g000001 Rmu_co8021462.1_g000001 Rmu_co8229237.1_g000001 Rmu_co8281571.1_g000001 Rmu_co8326451.1_g000001 Rmu_co8359553.1_g000001 Rmu_co8372117.1_g000001 Rmu_co8427177.1_g000001 Rmu_co8474063.1_g000002 Rmu_sc0000007.1_g000020 Rmu_sc0000173.1_g000002 Rmu_sc0000367.1_g000086 Rmu_sc0000367.1_g000088 Rmu_sc0000559.1_g000002 Rmu_sc0000733.1_g000014 Rmu_sc0000745.1_g000006 Rmu_sc0000791.1_g000046 Rmu_sc0000791.1_g000049 Rmu_sc0000824.1_g000010 Rmu_sc0000824.1_g000011 Rmu_sc0000834.1_g000009 Rmu_sc0000834.1_g000011 Rmu_sc0000911.1_g000020 Rmu_sc0000935.1_g000034 Rmu_sc0000935.1_g000051 Rmu_sc0000935.1_g000053 Rmu_sc0001000.1_g000005 Rmu_sc0001000.1_g000006 Rmu_sc0001150.1_g000004 Rmu_sc0001227.1_g000002 Rmu_sc0001322.1_g000018 Rmu_sc0001343.1_g000001 Rmu_sc0001356.1_g000004 Rmu_sc0001356.1_g000005 Rmu_sc0001363.1_g000007 Rmu_sc0001463.1_g000012 Rmu_sc0001484.1_g000023 Rmu_sc0001516.1_g000003 Rmu_sc0001516.1_g000005 Rmu_sc0001619.1_g000005 Rmu_sc0001648.1_g000032 Rmu_sc0001648.1_g000035 Rmu_sc0001694.1_g000008 Rmu_sc0001809.1_g000023 Rmu_sc0002093.1_g000027 Rmu_sc0002231.1_g000004 Rmu_sc0002245.1_g000001 Rmu_sc0002245.1_g000003 Rmu_sc0002354.1_g000045 Rmu_sc0002354.1_g000048 Rmu_sc0002368.1_g000014 Rmu_sc0002368.1_g000016 Rmu_sc0002368.1_g000017 Rmu_sc0002401.1_g000030 Rmu_sc0002487.1_g000012 Rmu_sc0002798.1_g000028 Rmu_sc0002923.1_g000012 Rmu_sc0002960.1_g000002 Rmu_sc0003033.1_g000072 Rmu_sc0003133.1_g000015 Rmu_sc0003168.1_g000007 Rmu_sc0003945.1_g000002 Rmu_sc0003945.1_g000004 Rmu_sc0003945.1_g000005 Rmu_sc0003979.1_g000004 Rmu_sc0004005.1_g000007 Rmu_sc0004059.1_g000018 Rmu_sc0004064.1_g000001 Rmu_sc0004083.1_g000007 Rmu_sc0004083.1_g000008 Rmu_sc0004354.1_g000033 Rmu_sc0004368.1_g000035 Rmu_sc0004483.1_g000032 Rmu_sc0004646.1_g000012 Rmu_sc0005014.1_g000006 Rmu_sc0005016.1_g000046 Rmu_sc0005016.1_g000051 Rmu_sc0005033.1_g000005 Rmu_sc0005033.1_g000007 Rmu_sc0005065.1_g000002 Rmu_sc0005065.1_g000004 Rmu_sc0005168.1_g000012 Rmu_sc0005238.1_g000001 Rmu_sc0005365.1_g000012 Rmu_sc0005631.1_g000005 Rmu_sc0005704.1_g000013 Rmu_sc0005704.1_g000014 Rmu_sc0005781.1_g000030 Rmu_sc0005789.1_g000016 Rmu_sc0006185.1_g000001 Rmu_sc0006185.1_g000002 Rmu_sc0006266.1_g000044 Rmu_sc0006561.1_g000018 Rmu_sc0006695.1_g000016 Rmu_sc0007739.1_g000022 Rmu_sc0008050.1_g000013 Rmu_sc0008169.1_g000006 Rmu_sc0008855.1_g000006 Rmu_sc0009298.1_g000002 Rmu_sc0009495.1_g000005 Rmu_sc0010608.1_g000003 Rmu_sc0010958.1_g000005 Rmu_sc0011506.1_g000001 Rmu_sc0011790.1_g000002 Rmu_sc0011790.1_g000003 Rmu_sc0012042.1_g000004 Rmu_sc0012042.1_g000005 Rmu_sc0012140.1_g000020 Rmu_sc0012726.1_g000005 Rmu_sc0012746.1_g000023 Rmu_sc0013193.1_g000002 Rmu_sc0013193.1_g000003 Rmu_sc0017997.1_g000001 Rmu_sc0021401.1_g000001 Rmu_sc0025959.1_g000001 Rmu_sc0026403.1_g000003 Rmu_sc0028616.1_g000002 Rmu_sc0029801.1_g000002 Rmu_sc0032453.1_g000001 Rmu_sc0033672.1_g000002 Rmu_sc0034553.1_g000001 Rmu_sc0036883.1_g000001 Rmu_ssc0000096.1_g000001 Rmu_ssc0000158.1_g000031 Rmu_ssc0000291.1_g000034 Rmu_ssc0000381.1_g000026 Rmu_ssc0000387.1_g000010 Rmu_ssc0000474.1_g000002 Rmu_ssc0000474.1_g000004
rosa_roxburghii Rroxscaffold_1G00020090 Rroxscaffold_1G00020100 Rroxscaffold_1G00022940 Rroxscaffold_1G00044600 Rroxscaffold_1G00054420 Rroxscaffold_1G00054430 Rroxscaffold_1G00056440 Rroxscaffold_2G00090180 Rroxscaffold_2G00101250 Rroxscaffold_2G00110600 Rroxscaffold_2G00152800 Rroxscaffold_4G00320370 Rroxscaffold_4G00320640 Rroxscaffold_4G00322420 Rroxscaffold_4G00324670 Rroxscaffold_5G00332760 Rroxscaffold_5G00345010 Rroxscaffold_5G00345020 Rroxscaffold_5G00355470 Rroxscaffold_5G00385520 Rroxscaffold_6G00394610 Rroxscaffold_6G00394700 Rroxscaffold_7G00164190 Rroxscaffold_7G00182750 Rroxscaffold_7G00183540 Rroxscaffold_7G00203520 Rroxscaffold_7G00211630
rosa_rugosa Rorug01G0041400 Rorug01G0041500 Rorug01G0065300 Rorug01G0065300 Rorug01G0069700 Rorug01G0069800 Rorug01G0070300 Rorug01G0072300 Rorug01G0072900 Rorug01G0093100 Rorug01G0147100.1 Rorug01G0196900 Rorug01G0259700 Rorug02G0162000 Rorug02G0182700 Rorug02G0212300 Rorug02G0214700 Rorug02G0229900 Rorug02G0246100 Rorug02G0257400 Rorug02G0259100 Rorug02G0341400 Rorug02G0341500 Rorug02G0341700 Rorug02G0341800 Rorug02G0355600 Rorug02G0386100 Rorug02G0386100 Rorug02G0387000 Rorug02G0387100 Rorug02G0388400 Rorug02G0388500 Rorug02G0429100 Rorug02G0429100 Rorug02G0455300 Rorug02G0634400 Rorug03G0163200 Rorug03G0198500 Rorug03G0199600 Rorug03G0204000 Rorug03G0265600 Rorug03G0266100 Rorug03G0266200 Rorug03G0280600 Rorug03G0348200 Rorug03G0349700 Rorug03G0349800 Rorug04G0020200 Rorug04G0073700 Rorug04G0215000 Rorug04G0426100 Rorug05G0064200 Rorug05G0064300 Rorug05G0265700 Rorug05G0287400 Rorug05G0287500 Rorug05G0287500 Rorug05G0405000 Rorug05G0525700 Rorug05G0525800 Rorug05G0588200 Rorug06G0038200 Rorug06G0057900 Rorug06G0058000 Rorug06G0058500 Rorug06G0058600 Rorug06G0116700 Rorug06G0159300.1 Rorug06G0159400 Rorug06G0174700 Rorug06G0375500 Rorug07G0091400 Rorug07G0094900 Rorug07G0108100 Rorug07G0140700 Rorug07G0140700 Rorug07G0207100 Rorug07G0207100 Rorug07G0207200 Rorug07G0287300
rosa_samantha Rh1AG100100 Rh1AG104500 Rh1BG150700 Rh1BG237700 Rh1BG334000 Rh1CG090000 Rh1CG100100 Rh1CG347300 Rh1DG090500 Rh1DG096100 Rh1DG107400 Rh1DG182500 Rh1DG265700 Rh1DG365200 Rh2BG256800 Rh2BG361300 Rh2BG468600 Rh2BG549800 Rh2CG270900 Rh2DG276700 Rh2DG276800 Rh2DG377700 Rh2DG477900 Rh3AG161200 Rh3BG138800 Rh3BG185700 Rh3BG269600 Rh3CG176000 Rh4AG006100 Rh4AG216700 Rh4AG355800 Rh4CG108600 Rh5AG141700 Rh5AG480000 Rh5BG014500 Rh5BG134600 Rh5BG295400 Rh5BG552900 Rh5CG058600 Rh5CG286400 Rh5CG350900 Rh5CG575800 Rh5DG004300 Rh5DG254600 Rh5DG356500 Rh6AG106500 Rh6AG191100 Rh6AG224700 Rh6BG074700 Rh6BG181400 Rh6BG352200 Rh6BG408400 Rh6BG453600 Rh6CG047400 Rh6CG172200 Rh6CG189400 Rh6CG515800 Rh6DG042900 Rh6DG163400 Rh7AG089300 Rh7AG227400 Rh7AG275600 Rh7AG375100 Rh7AG460900 Rh7AG485200 Rh7BG146100 Rh7BG354300 Rh7CG077100 Rh7CG294500 Rh7CG393800 Rh7DG041700 Rh7DG062700 Rh7DG091700 Rh7DG178900 Rh7DG192300 Rh7DG297000 Rh7DG403600 Rh7DG411800
rosa_wichuraiana Rw0G007100 Rw0G011430 Rw1G003580 Rw1G004040 Rw1G005880 Rw1G009860 Rw1G009990 Rw1G012190 Rw1G012200 Rw1G013740 Rw1G013750 Rw1G016710 Rw1G021050 Rw2G023790 Rw2G028810 Rw2G035890 Rw2G036250 Rw4G008880 Rw4G014380 Rw4G014390 Rw4G016020 Rw4G037160 Rw5G010060 Rw5G030620 Rw5G033840 Rw5G049840 Rw5G049850 Rw6G003450 Rw6G015080 Rw7G019640 Rw7G024060 Rw7G024070 Rw7G029090 Rw7G037010 Rw7G039170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2191
Acc65I GGTACC 1 cut(s) 2587
AccB1I GGYRCC 2 cut(s) 334, 2587
AccI GTMKAC 4 cut(s) 635, 661, 973, 1967
AciI CCGC 3 cut(s) 677, 1124, 2366
AclI AACGTT 1 cut(s) 291
AclWI GGATC 2 cut(s) 668, 2217
AcoI YGGCCR 1 cut(s) 1798
AcsI RAATTY 6 cut(s) 52, 59, 443, 523, 1728, 1902
AcuI CTGAAG 2 cut(s) 852, 2474
AfaI GTAC 2 cut(s) 1463, 2589
AfiI CCNNNNNNNGG 3 cut(s) 706, 944, 2189
AhlI ACTAGT 1 cut(s) 2623
AjnI CCWGG 2 cut(s) 337, 1692
Alw26I GTCTC 4 cut(s) 39, 143, 254, 389
AlwI GGATC 2 cut(s) 668, 2217
AoxI GGCC 2 cut(s) 501, 1798
ApeKI GCWGC 3 cut(s) 167, 436, 2021
ApoI RAATTY 6 cut(s) 52, 59, 443, 523, 1728, 1902
ArsI GACNNNNNNTTYG 2 cut(s) 203, 235
AseI ATTAAT 2 cut(s) 729, 2076
Asp700I GAANNNNTTC 2 cut(s) 470, 2115
Asp718I GGTACC 1 cut(s) 2587
AspS9I GGNCC 3 cut(s) 782, 1598, 1665
AsuHPI GGTGA 8 cut(s) 583, 683, 1144, 1259, 1772, 2327, 2440, 2477
AsuNHI GCTAGC 2 cut(s) 1061, 1090
AvaII GGWCC 3 cut(s) 782, 1598, 1665
BaeGI GKGCMC 1 cut(s) 2456
BanI GGYRCC 2 cut(s) 334, 2587
BbsI GAAGAC 4 cut(s) 189, 1135, 2468, 2474
BbvCI CCTCAGC 2 cut(s) 243, 2331
BbvI GCAGC 3 cut(s) 154, 423, 2008
BccI CCATC 6 cut(s) 341, 1278, 1671, 2187, 2207, 2599
BceAI ACGGC 1 cut(s) 1813
BcgI CGANNNNNNTGC 2 cut(s) 1262, 1296
BciT130I CCWGG 2 cut(s) 339, 1694
BclI TGATCA 1 cut(s) 1579
BcoDI GTCTC 4 cut(s) 39, 143, 254, 389
BcuI ACTAGT 1 cut(s) 2623
BfaI CTAG 8 cut(s) 252, 1062, 1091, 1371, 1485, 1617, 2220, 2624
BfuAI ACCTGC 1 cut(s) 2191
BisI GCNGC 4 cut(s) 168, 437, 2022, 2367
BlsI GCNGC 4 cut(s) 169, 438, 2023, 2368
Bme1390I CCNGG 2 cut(s) 339, 1694
Bme18I GGWCC 3 cut(s) 782, 1598, 1665
BmgT120I GGNCC 3 cut(s) 782, 1598, 1665
BmiI GGNNCC 4 cut(s) 336, 784, 1600, 2589
BmrFI CCNGG 2 cut(s) 339, 1694
BmrI ACTGGG 1 cut(s) 388
BmsI GCATC 5 cut(s) 133, 261, 1282, 2542, 2555
BmtI GCTAGC 2 cut(s) 1065, 1094
BmuI ACTGGG 1 cut(s) 388
BpiI GAAGAC 4 cut(s) 189, 1135, 2468, 2474
BpmI CTGGAG 4 cut(s) 199, 360, 1801, 2271
Bpu10I CCTNAGC 4 cut(s) 243, 1365, 1893, 2331
BpuEI CTTGAG 1 cut(s) 314
Bsa29I ATCGAT 1 cut(s) 1477
BsaI GGTCTC 2 cut(s) 254, 389
BsaJI CCNNGG 3 cut(s) 78, 498, 1305
BsaXI ACNNNNNCTCC 4 cut(s) 1534, 1564, 1867, 1897
Bsc4I CCNNNNNNNGG 3 cut(s) 706, 944, 2189
Bse1I ACTGG 4 cut(s) 383, 524, 2065, 2367
Bse3DI GCAATG 5 cut(s) 162, 955, 1119, 1261, 1362
BseBI CCWGG 2 cut(s) 339, 1694
BseCI ATCGAT 1 cut(s) 1477
BseDI CCNNGG 3 cut(s) 78, 498, 1305
BseGI GGATG 9 cut(s) 148, 276, 596, 1157, 1682, 1959, 2198, 2218, 2449
BseLI CCNNNNNNNGG 3 cut(s) 706, 944, 2189
BseMI GCAATG 5 cut(s) 162, 955, 1119, 1261, 1362
BseMII CTCAG 6 cut(s) 138, 257, 1106, 1617, 2322, 2570
BseNI ACTGG 4 cut(s) 383, 524, 2065, 2367
BseRI GAGGAG 3 cut(s) 1856, 1925, 2600
BseSI GKGCMC 1 cut(s) 2456
BseXI GCAGC 3 cut(s) 154, 423, 2008
BseYI CCCAGC 1 cut(s) 1094
BsgI GTGCAG 1 cut(s) 1100
BshFI GGCC 2 cut(s) 503, 1800
BshNI GGYRCC 2 cut(s) 334, 2587
BshVI ATCGAT 1 cut(s) 1477
BslFI GGGAC 2 cut(s) 904, 1584
BslI CCNNNNNNNGG 3 cut(s) 706, 944, 2189
BsmAI GTCTC 4 cut(s) 39, 143, 254, 389
BsmFI GGGAC 2 cut(s) 904, 1584
BsnI GGCC 2 cut(s) 503, 1800
Bso31I GGTCTC 2 cut(s) 254, 389
Bsp1286I GDGCHC 1 cut(s) 2456
Bsp143I GATC 8 cut(s) 673, 814, 1203, 1293, 1579, 2222, 2266, 2618
Bsp19I CCATGG 1 cut(s) 78
BspACI CCGC 3 cut(s) 677, 1124, 2366
BspANI GGCC 2 cut(s) 503, 1800
BspCNI CTCAG 6 cut(s) 139, 256, 1107, 1618, 2323, 2571
BspDI ATCGAT 1 cut(s) 1477
BspLI GGNNCC 4 cut(s) 336, 784, 1600, 2589
BspMI ACCTGC 1 cut(s) 2191
BspOI GCTAGC 2 cut(s) 1065, 1094
BspPI GGATC 2 cut(s) 668, 2217
BspT107I GGYRCC 2 cut(s) 334, 2587
BspTNI GGTCTC 2 cut(s) 254, 389
BsrDI GCAATG 5 cut(s) 162, 955, 1119, 1261, 1362
BsrI ACTGG 4 cut(s) 383, 524, 2065, 2367
BssECI CCNNGG 3 cut(s) 78, 498, 1305
BssMI GATC 8 cut(s) 673, 814, 1203, 1293, 1579, 2222, 2266, 2618
BssT1I CCWWGG 3 cut(s) 78, 498, 1305
Bst2UI CCWGG 2 cut(s) 339, 1694
Bst4CI ACNGT 6 cut(s) 633, 867, 904, 2036, 2467, 2545
Bst6I CTCTTC 1 cut(s) 649
BstC8I GCNNGC 4 cut(s) 961, 1022, 1063, 1092
BstDEI CTNAG 9 cut(s) 147, 243, 871, 1115, 1365, 1626, 1893, 2331, 2579
BstDSI CCRYGG 1 cut(s) 78
BstEII GGTNACC 1 cut(s) 350
BstF5I GGATG 9 cut(s) 148, 276, 596, 1157, 1682, 1959, 2198, 2218, 2449
BstKTI GATC 8 cut(s) 676, 817, 1206, 1296, 1582, 2225, 2269, 2621
BstMAI GTCTC 4 cut(s) 39, 143, 254, 389
BstMBI GATC 8 cut(s) 673, 814, 1203, 1293, 1579, 2222, 2266, 2618
BstMWI GCNNNNNNNGC 6 cut(s) 341, 1087, 1172, 1361, 1894, 2162
BstNI CCWGG 2 cut(s) 339, 1694
BstNSI RCATGY 2 cut(s) 539, 1024
BstPI GGTNACC 1 cut(s) 350
BstSCI CCNGG 2 cut(s) 337, 1692
BstSLI GKGCMC 1 cut(s) 2456
BstV1I GCAGC 3 cut(s) 154, 423, 2008
BstV2I GAAGAC 4 cut(s) 189, 1135, 2468, 2474
BstX2I RGATCY 1 cut(s) 2222
BstYI RGATCY 1 cut(s) 2222
Bsu15I ATCGAT 1 cut(s) 1477
BsuRI GGCC 2 cut(s) 503, 1800
BsuTUI ATCGAT 1 cut(s) 1477
BtgI CCRYGG 1 cut(s) 78
BtsCI GGATG 9 cut(s) 148, 276, 596, 1157, 1682, 1959, 2198, 2218, 2449
BtsIMutI CAGTG 4 cut(s) 376, 438, 872, 2032
BveI ACCTGC 1 cut(s) 2191
Cac8I GCNNGC 4 cut(s) 961, 1022, 1063, 1092
Cfr13I GGNCC 3 cut(s) 782, 1598, 1665
ClaI ATCGAT 1 cut(s) 1477
CseI GACGC 1 cut(s) 2336
Csp6I GTAC 2 cut(s) 1462, 2588
CviQI GTAC 2 cut(s) 1462, 2588
DdeI CTNAG 9 cut(s) 147, 243, 871, 1115, 1365, 1626, 1893, 2331, 2579
DpnI GATC 8 cut(s) 675, 816, 1205, 1295, 1581, 2224, 2268, 2620
DpnII GATC 8 cut(s) 673, 814, 1203, 1293, 1579, 2222, 2266, 2618
EaeI YGGCCR 1 cut(s) 1798
Eam1104I CTCTTC 1 cut(s) 649
EarI CTCTTC 1 cut(s) 649
Eco130I CCWWGG 3 cut(s) 78, 498, 1305
Eco147I AGGCCT 1 cut(s) 503
Eco31I GGTCTC 2 cut(s) 254, 389
Eco32I GATATC 1 cut(s) 967
Eco47I GGWCC 3 cut(s) 782, 1598, 1665
Eco57I CTGAAG 2 cut(s) 852, 2474
Eco91I GGTNACC 1 cut(s) 350
EcoO65I GGTNACC 1 cut(s) 350
EcoRII CCWGG 2 cut(s) 337, 1692
EcoRV GATATC 1 cut(s) 967
EcoT14I CCWWGG 3 cut(s) 78, 498, 1305
ErhI CCWWGG 3 cut(s) 78, 498, 1305
FalI AAGNNNNNCTT 4 cut(s) 458, 490, 476, 508
FaqI GGGAC 2 cut(s) 904, 1584
FauI CCCGC 1 cut(s) 1117
FbaI TGATCA 1 cut(s) 1579
FblI GTMKAC 4 cut(s) 635, 661, 973, 1967
Fnu4HI GCNGC 4 cut(s) 168, 437, 2022, 2367
FokI GGATG 9 cut(s) 155, 283, 583, 1144, 1689, 1966, 2205, 2225, 2456
Fsp4HI GCNGC 4 cut(s) 168, 437, 2022, 2367
FspBI CTAG 8 cut(s) 252, 1062, 1091, 1371, 1485, 1617, 2220, 2624
GluI GCNGC 4 cut(s) 168, 437, 2022, 2367
GsaI CCCAGC 1 cut(s) 1098
GsuI CTGGAG 4 cut(s) 199, 360, 1801, 2271
HaeIII GGCC 2 cut(s) 503, 1800
HgaI GACGC 1 cut(s) 2336
HincII GTYRAC 1 cut(s) 2422
HindII GTYRAC 1 cut(s) 2422
HindIII AAGCTT 3 cut(s) 604, 713, 2154
HinfI GANTC 4 cut(s) 212, 1141, 2061, 2405
HpaI GTTAAC 1 cut(s) 2422
HphI GGTGA 8 cut(s) 583, 683, 1144, 1259, 1772, 2327, 2440, 2477
Hpy166II GTNNAC 5 cut(s) 636, 662, 974, 1968, 2422
Hpy188I TCNGA 7 cut(s) 142, 832, 861, 1029, 1116, 2169, 2506
Hpy8I GTNNAC 5 cut(s) 636, 662, 974, 1968, 2422
HpyAV CCTTC 8 cut(s) 81, 101, 366, 460, 1080, 1956, 2051, 2498
HpyCH4III ACNGT 6 cut(s) 633, 867, 904, 2036, 2467, 2545
HpyCH4IV ACGT 3 cut(s) 291, 1390, 2139
HpyF10VI GCNNNNNNNGC 6 cut(s) 341, 1087, 1172, 1361, 1894, 2162
HpyF3I CTNAG 9 cut(s) 147, 243, 871, 1115, 1365, 1626, 1893, 2331, 2579
HpySE526I ACGT 3 cut(s) 291, 1390, 2139
KpnI GGTACC 1 cut(s) 2591
Ksp22I TGATCA 1 cut(s) 1579
KspAI GTTAAC 1 cut(s) 2422
Kzo9I GATC 8 cut(s) 673, 814, 1203, 1293, 1579, 2222, 2266, 2618
LmnI GCTCC 4 cut(s) 341, 1511, 1938, 2246
Lsp1109I GCAGC 3 cut(s) 154, 423, 2008
LweI GCATC 5 cut(s) 133, 261, 1282, 2542, 2555
MaeI CTAG 8 cut(s) 252, 1062, 1091, 1371, 1485, 1617, 2220, 2624
MaeII ACGT 3 cut(s) 291, 1390, 2139
MaeIII GTNAC 5 cut(s) 283, 350, 592, 1150, 2030
MalI GATC 8 cut(s) 675, 816, 1205, 1295, 1581, 2224, 2268, 2620
MboI GATC 8 cut(s) 673, 814, 1203, 1293, 1579, 2222, 2266, 2618
MflI RGATCY 1 cut(s) 2222
MhlI GDGCHC 1 cut(s) 2456
MlyI GAGTC 1 cut(s) 206
MmeI TCCRAC 3 cut(s) 1355, 1841, 2105
MroXI GAANNNNTTC 2 cut(s) 470, 2115
MslI CAYNNNNRTG 2 cut(s) 204, 1056
MspA1I CMGCKG 1 cut(s) 267
MspR9I CCNGG 2 cut(s) 339, 1694
MvaI CCWGG 2 cut(s) 339, 1694
MwoI GCNNNNNNNGC 6 cut(s) 341, 1087, 1172, 1361, 1894, 2162
NcoI CCATGG 1 cut(s) 78
NdeII GATC 8 cut(s) 673, 814, 1203, 1293, 1579, 2222, 2266, 2618
NheI GCTAGC 2 cut(s) 1061, 1090
NlaIV GGNNCC 4 cut(s) 336, 784, 1600, 2589
NmuCI GTSAC 2 cut(s) 1150, 2030
NspI RCATGY 2 cut(s) 539, 1024
PaeI GCATGC 1 cut(s) 1024
PceI AGGCCT 1 cut(s) 503
PdmI GAANNNNTTC 2 cut(s) 470, 2115
PfeI GAWTC 3 cut(s) 1141, 2061, 2405
PfoI TCCNGGA 1 cut(s) 1692
PkrI GCNGC 4 cut(s) 169, 438, 2023, 2368
PleI GAGTC 1 cut(s) 206
PpsI GAGTC 1 cut(s) 206
PshBI ATTAAT 2 cut(s) 729, 2076
Psp1406I AACGTT 1 cut(s) 291
Psp6I CCWGG 2 cut(s) 337, 1692
PspEI GGTNACC 1 cut(s) 350
PspFI CCCAGC 1 cut(s) 1094
PspGI CCWGG 2 cut(s) 337, 1692
PspN4I GGNNCC 4 cut(s) 336, 784, 1600, 2589
PspPI GGNCC 3 cut(s) 782, 1598, 1665
PsrI GAACNNNNNNTAC 2 cut(s) 870, 902
PsuI RGATCY 1 cut(s) 2222
PvuII CAGCTG 1 cut(s) 267
RsaI GTAC 2 cut(s) 1463, 2589
RsaNI GTAC 2 cut(s) 1462, 2588
RseI CAYNNNNRTG 2 cut(s) 204, 1056
SatI GCNGC 4 cut(s) 168, 437, 2022, 2367
Sau3AI GATC 8 cut(s) 673, 814, 1203, 1293, 1579, 2222, 2266, 2618
Sau96I GGNCC 3 cut(s) 782, 1598, 1665
SchI GAGTC 1 cut(s) 206
ScrFI CCNGG 2 cut(s) 339, 1694
SduI GDGCHC 1 cut(s) 2456
SfaNI GCATC 5 cut(s) 133, 261, 1282, 2542, 2555
SinI GGWCC 3 cut(s) 782, 1598, 1665
SmiMI CAYNNNNRTG 2 cut(s) 204, 1056
SmlI CTYRAG 1 cut(s) 329
SmoI CTYRAG 1 cut(s) 329
SpeI ACTAGT 1 cut(s) 2623
SphI GCATGC 1 cut(s) 1024
SseBI AGGCCT 1 cut(s) 503
SsiI CCGC 3 cut(s) 677, 1124, 2366
SspI AATATT 2 cut(s) 1684, 2242
SspMI CTAG 8 cut(s) 252, 1062, 1091, 1371, 1485, 1617, 2220, 2624
StuI AGGCCT 1 cut(s) 503
StyD4I CCNGG 2 cut(s) 337, 1692
StyI CCWWGG 3 cut(s) 78, 498, 1305
TaaI ACNGT 6 cut(s) 633, 867, 904, 2036, 2467, 2545
TaiI ACGT 3 cut(s) 294, 1393, 2142
TaqI TCGA 4 cut(s) 455, 1202, 1282, 1477
TauI GCSGC 1 cut(s) 2369
TfiI GAWTC 3 cut(s) 1141, 2061, 2405
TscAI CASTG 4 cut(s) 383, 438, 872, 2039
TseFI GTSAC 2 cut(s) 1150, 2030
TseI GCWGC 3 cut(s) 167, 436, 2021
Tsp45I GTSAC 2 cut(s) 1150, 2030
TspDTI ATGAA 7 cut(s) 135, 411, 1361, 1970, 2057, 2163, 2222
TspRI CASTG 4 cut(s) 383, 438, 872, 2039
VpaK11BI GGWCC 3 cut(s) 782, 1598, 1665
VspI ATTAAT 2 cut(s) 729, 2076
XapI RAATTY 6 cut(s) 52, 59, 443, 523, 1728, 1902
XbaI TCTAGA 1 cut(s) 251
XceI RCATGY 2 cut(s) 539, 1024
XmiI GTMKAC 4 cut(s) 635, 661, 973, 1967
XmnI GAANNNNTTC 2 cut(s) 470, 2115
XspI CTAG 8 cut(s) 252, 1062, 1091, 1371, 1485, 1617, 2220, 2624
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.