Prupe.3G109000_v2.0.a1

Domain of unknown function (DUF4283)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
8775801 .. 8777332
1532 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G109000.1

Sequence Viewer

Length: 1416 bp
ATGGCGGAGGATCAGTTGGTGTTAAGCGATGATGATGTTGTAATTCAGCAAAGGGCAATTCCCTCAATACATTTCTCAGGCAAAGTAAAGAGCTCTTTGTATCGGCCTTGGCATTTTGCTGTAATTATTAAGCTCATGGGTCGTCCTCTGGCTTTCACATTTCTCAGATCTCGTCTTCTCCAGAGATGGGCACTTAAGGGTCCTATGAGCTTAATAGATCTAGAGAATAACAACTTCATTGCGAAGTTCCTTTATGAGGAAGATATGAGATACGTGCTCACTGGTGGTCCTTGGCAAATTGCTGGCCAATACATTGTGACACAGAAATGGAAGCCTGGGTTTAATGCGAAGGAGGAGAAGATCACCCATATGACTGCTTGGGTGGATGCTCATACTCTCAGTCAAGGTCGTGGTAAGTTTGCTCGAATTTGTGGCGAACTTGATTTGGCTAAGCCTTTTACCCCATTCATTAAGATTGAAGGCCGTACATATGGGGTTGTGTATGAGGGAATTAATTTGGTTTGCTTTGAATGTGGATGTTTTGGGCATGGGAGAGATTCTTGCCCTATTATTTTGCAAGCCAAACAGCAGGTTCCAGAGTCAGATAATGCTGATTGTATGGAGGATATTTCTACTGTCCAGGTTAATGTGAATTTAGGTGCTGCTACAAAGGAGGTTGAGGTTCCAGCAAAGATGCACGGGGAGTGGATGTTGTTGAAGCCAAGGAATTTTAGGAAGAATAGCACAAATGATATAGGGAAGGGTGCTGATCTTAGCAAGAGGAATACAAAGGATACTGGTACGAAAGCTATTAGTCCTGTCTTTGGTTCTCGTTTCAATGTGTTGATTGAGGAGGTTGGCAGAGAAGAGGATATGGAGGGATCTCCTCCTGTTAAGACTAGTGATTCTAGTTCTAAAAAACAGGGTTCTTTTGCCAATACTTATTCTACTAAGGGAAAAAGTGCTGGGGTGAAATTTGCTTCCTCTCGTGACTCTGGCACATGGGTGTTTAAAAAACCTCTCAAAGACATTTCCAATTCCGTGGTAGCTAATTCTAGTGGTGGTGGTGTTAAAAGTGCTGGGCCTAAATCTTTCTCTTGTCATGATATTGAACCTGTGAGGCTGCAAGTTAAGGGCTCTGATGTTCAAGATGATGTTCGGGGGAAGTTTTCTTTTAATTTAGGTGGCTCTCTTTTTCCAAAGTTGCCTTTGGGTAAGGAAGGTTTATTTTTTGGTCATGAACCTCCTGATATCAGTGAGATGGGAATTAATGAGGTTGAGCCTTCCGATGCGAGTGATATGGATCATCAGGGTAATTTCTCTGAACATTGTGAGTCTGATACTGGACTAGAAGCTGATAGCTCTTTTGAGCATGATGGTTTTGAAGCCGTTGAGGCTGAGCATGTGCAGATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

472

Amino Acids

51.94

Weight (kDa)

5.9

Isoelectric Point (pI)

35.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01050
fragaria_vesca FvH4_1g24181 FvH4_1g28741 FvH4_1g29781 FvH4_2g00621 FvH4_2g04885 FvH4_2g11953 FvH4_2g11954 FvH4_2g12001 FvH4_2g12002 FvH4_2g12222 FvH4_2g12223 FvH4_2g38351 FvH4_3g04401 FvH4_3g31330 FvH4_3g33091 FvH4_4g11461 FvH4_5g27993 FvH4_5g27994 FvH4_5g28072 FvH4_5g28231 FvH4_5g28591 FvH4_5g34261 FvH4_6g18162 FvH4_6g25500 FvH4_6g25561 FvH4_6g25792 FvH4_6g27602 FvH4_6g46881
malus_domestica MD03G1019700.v1.1
prunus_persica Prupe.1G055400_v2.0.a1 Prupe.1G179200_v2.0.a1 Prupe.1G208200_v2.0.a1 Prupe.1G231200_v2.0.a1 Prupe.2G044900_v2.0.a1 Prupe.2G055100_v2.0.a1 Prupe.2G097600_v2.0.a1 Prupe.2G114200_v2.0.a1 Prupe.3G109000_v2.0.a1 Prupe.3G109300_v2.0.a1 Prupe.3G109600_v2.0.a1 Prupe.4G246900_v2.0.a1 Prupe.5G026400_v2.0.a1
pyrus_communis pycom05g17130 pycom07g06820 pycom07g18590 pycom07g22730 pycom12401g00120 pycom12401g00180 pycom420g00470
rosa_chinensis RchiOBHm_Chr1g0342591 RchiOBHm_Chr1g0342601 RchiOBHm_Chr1g0342611 RchiOBHm_Chr1g0351011 RchiOBHm_Chr2g0146151 RchiOBHm_Chr2g0171821 RchiOBHm_Chr3g0492921 RchiOBHm_Chr3g0492931 RchiOBHm_Chr4g0406871 RchiOBHm_Chr4g0426311 RchiOBHm_Chr5g0020721 RchiOBHm_Chr5g0050111 RchiOBHm_Chr5g0051681 RchiOBHm_Chr5g0053531 RchiOBHm_Chr5g0054841 RchiOBHm_Chr5g0055061 RchiOBHm_Chr5g0055071 RchiOBHm_Chr6g0248911 RchiOBHm_Chr6g0291741 RchiOBHm_Chr7g0187781 RchiOBHm_Chr7g0220081 RchiOBHm_Chr7g0224391 RchiOBHm_Chr7g0235221
rosa_laevigata RLG00000002133 RLG00000002402 RLG00000002736 RLG00000011046 RLG00000013214 RLG00000016550 RLG00000021669 RLG00000022948 RLG00000023691 RLG00000024682 RLG00000027826 RLG00000029734 RLG00000029831 RLG00000030305 RLG00000037042
rosa_multiflora Rmu_co7992532.1_g000001 Rmu_co8021462.1_g000001 Rmu_co8229237.1_g000001 Rmu_co8281571.1_g000001 Rmu_co8326451.1_g000001 Rmu_co8359553.1_g000001 Rmu_co8372117.1_g000001 Rmu_co8427177.1_g000001 Rmu_co8474063.1_g000002 Rmu_sc0000007.1_g000020 Rmu_sc0000173.1_g000002 Rmu_sc0000367.1_g000086 Rmu_sc0000367.1_g000088 Rmu_sc0000559.1_g000002 Rmu_sc0000733.1_g000014 Rmu_sc0000745.1_g000006 Rmu_sc0000791.1_g000046 Rmu_sc0000791.1_g000049 Rmu_sc0000824.1_g000010 Rmu_sc0000824.1_g000011 Rmu_sc0000834.1_g000009 Rmu_sc0000834.1_g000011 Rmu_sc0000911.1_g000020 Rmu_sc0000935.1_g000034 Rmu_sc0000935.1_g000051 Rmu_sc0000935.1_g000053 Rmu_sc0001000.1_g000005 Rmu_sc0001000.1_g000006 Rmu_sc0001150.1_g000004 Rmu_sc0001227.1_g000002 Rmu_sc0001322.1_g000018 Rmu_sc0001343.1_g000001 Rmu_sc0001356.1_g000004 Rmu_sc0001356.1_g000005 Rmu_sc0001363.1_g000007 Rmu_sc0001463.1_g000012 Rmu_sc0001484.1_g000023 Rmu_sc0001516.1_g000003 Rmu_sc0001516.1_g000005 Rmu_sc0001619.1_g000005 Rmu_sc0001648.1_g000032 Rmu_sc0001648.1_g000035 Rmu_sc0001694.1_g000008 Rmu_sc0001809.1_g000023 Rmu_sc0002093.1_g000027 Rmu_sc0002231.1_g000004 Rmu_sc0002245.1_g000001 Rmu_sc0002245.1_g000003 Rmu_sc0002354.1_g000045 Rmu_sc0002354.1_g000048 Rmu_sc0002368.1_g000014 Rmu_sc0002368.1_g000016 Rmu_sc0002368.1_g000017 Rmu_sc0002401.1_g000030 Rmu_sc0002487.1_g000012 Rmu_sc0002798.1_g000028 Rmu_sc0002923.1_g000012 Rmu_sc0002960.1_g000002 Rmu_sc0003033.1_g000072 Rmu_sc0003133.1_g000015 Rmu_sc0003168.1_g000007 Rmu_sc0003945.1_g000002 Rmu_sc0003945.1_g000004 Rmu_sc0003945.1_g000005 Rmu_sc0003979.1_g000004 Rmu_sc0004005.1_g000007 Rmu_sc0004059.1_g000018 Rmu_sc0004064.1_g000001 Rmu_sc0004083.1_g000007 Rmu_sc0004083.1_g000008 Rmu_sc0004354.1_g000033 Rmu_sc0004368.1_g000035 Rmu_sc0004483.1_g000032 Rmu_sc0004646.1_g000012 Rmu_sc0005014.1_g000006 Rmu_sc0005016.1_g000046 Rmu_sc0005016.1_g000051 Rmu_sc0005033.1_g000005 Rmu_sc0005033.1_g000007 Rmu_sc0005065.1_g000002 Rmu_sc0005065.1_g000004 Rmu_sc0005168.1_g000012 Rmu_sc0005238.1_g000001 Rmu_sc0005365.1_g000012 Rmu_sc0005631.1_g000005 Rmu_sc0005704.1_g000013 Rmu_sc0005704.1_g000014 Rmu_sc0005781.1_g000030 Rmu_sc0005789.1_g000016 Rmu_sc0006185.1_g000001 Rmu_sc0006185.1_g000002 Rmu_sc0006266.1_g000044 Rmu_sc0006561.1_g000018 Rmu_sc0006695.1_g000016 Rmu_sc0007739.1_g000022 Rmu_sc0008050.1_g000013 Rmu_sc0008169.1_g000006 Rmu_sc0008855.1_g000006 Rmu_sc0009298.1_g000002 Rmu_sc0009495.1_g000005 Rmu_sc0010608.1_g000003 Rmu_sc0010958.1_g000005 Rmu_sc0011506.1_g000001 Rmu_sc0011790.1_g000002 Rmu_sc0011790.1_g000003 Rmu_sc0012042.1_g000004 Rmu_sc0012042.1_g000005 Rmu_sc0012140.1_g000020 Rmu_sc0012726.1_g000005 Rmu_sc0012746.1_g000023 Rmu_sc0013193.1_g000002 Rmu_sc0013193.1_g000003 Rmu_sc0017997.1_g000001 Rmu_sc0021401.1_g000001 Rmu_sc0025959.1_g000001 Rmu_sc0026403.1_g000003 Rmu_sc0028616.1_g000002 Rmu_sc0029801.1_g000002 Rmu_sc0032453.1_g000001 Rmu_sc0033672.1_g000002 Rmu_sc0034553.1_g000001 Rmu_sc0036883.1_g000001 Rmu_ssc0000096.1_g000001 Rmu_ssc0000158.1_g000031 Rmu_ssc0000291.1_g000034 Rmu_ssc0000381.1_g000026 Rmu_ssc0000387.1_g000010 Rmu_ssc0000474.1_g000002 Rmu_ssc0000474.1_g000004
rosa_roxburghii Rroxscaffold_1G00020090 Rroxscaffold_1G00020100 Rroxscaffold_1G00022940 Rroxscaffold_1G00044600 Rroxscaffold_1G00054420 Rroxscaffold_1G00054430 Rroxscaffold_1G00056440 Rroxscaffold_2G00090180 Rroxscaffold_2G00101250 Rroxscaffold_2G00110600 Rroxscaffold_2G00152800 Rroxscaffold_4G00320370 Rroxscaffold_4G00320640 Rroxscaffold_4G00322420 Rroxscaffold_4G00324670 Rroxscaffold_5G00332760 Rroxscaffold_5G00345010 Rroxscaffold_5G00345020 Rroxscaffold_5G00355470 Rroxscaffold_5G00385520 Rroxscaffold_6G00394610 Rroxscaffold_6G00394700 Rroxscaffold_7G00164190 Rroxscaffold_7G00182750 Rroxscaffold_7G00183540 Rroxscaffold_7G00203520 Rroxscaffold_7G00211630
rosa_rugosa Rorug01G0041400 Rorug01G0041500 Rorug01G0065300 Rorug01G0065300 Rorug01G0069700 Rorug01G0069800 Rorug01G0070300 Rorug01G0072300 Rorug01G0072900 Rorug01G0093100 Rorug01G0147100.1 Rorug01G0196900 Rorug01G0259700 Rorug02G0162000 Rorug02G0182700 Rorug02G0212300 Rorug02G0214700 Rorug02G0229900 Rorug02G0246100 Rorug02G0257400 Rorug02G0259100 Rorug02G0341400 Rorug02G0341500 Rorug02G0341700 Rorug02G0341800 Rorug02G0355600 Rorug02G0386100 Rorug02G0386100 Rorug02G0387000 Rorug02G0387100 Rorug02G0388400 Rorug02G0388500 Rorug02G0429100 Rorug02G0429100 Rorug02G0455300 Rorug02G0634400 Rorug03G0163200 Rorug03G0198500 Rorug03G0199600 Rorug03G0204000 Rorug03G0265600 Rorug03G0266100 Rorug03G0266200 Rorug03G0280600 Rorug03G0348200 Rorug03G0349700 Rorug03G0349800 Rorug04G0020200 Rorug04G0073700 Rorug04G0215000 Rorug04G0426100 Rorug05G0064200 Rorug05G0064300 Rorug05G0265700 Rorug05G0287400 Rorug05G0287500 Rorug05G0287500 Rorug05G0405000 Rorug05G0525700 Rorug05G0525800 Rorug05G0588200 Rorug06G0038200 Rorug06G0057900 Rorug06G0058000 Rorug06G0058500 Rorug06G0058600 Rorug06G0116700 Rorug06G0159300.1 Rorug06G0159400 Rorug06G0174700 Rorug06G0375500 Rorug07G0091400 Rorug07G0094900 Rorug07G0108100 Rorug07G0140700 Rorug07G0140700 Rorug07G0207100 Rorug07G0207100 Rorug07G0207200 Rorug07G0287300
rosa_samantha Rh1AG100100 Rh1AG104500 Rh1BG150700 Rh1BG237700 Rh1BG334000 Rh1CG090000 Rh1CG100100 Rh1CG347300 Rh1DG090500 Rh1DG096100 Rh1DG107400 Rh1DG182500 Rh1DG265700 Rh1DG365200 Rh2BG256800 Rh2BG361300 Rh2BG468600 Rh2BG549800 Rh2CG270900 Rh2DG276700 Rh2DG276800 Rh2DG377700 Rh2DG477900 Rh3AG161200 Rh3BG138800 Rh3BG185700 Rh3BG269600 Rh3CG176000 Rh4AG006100 Rh4AG216700 Rh4AG355800 Rh4CG108600 Rh5AG141700 Rh5AG480000 Rh5BG014500 Rh5BG134600 Rh5BG295400 Rh5BG552900 Rh5CG058600 Rh5CG286400 Rh5CG350900 Rh5CG575800 Rh5DG004300 Rh5DG254600 Rh5DG356500 Rh6AG106500 Rh6AG191100 Rh6AG224700 Rh6BG074700 Rh6BG181400 Rh6BG352200 Rh6BG408400 Rh6BG453600 Rh6CG047400 Rh6CG172200 Rh6CG189400 Rh6CG515800 Rh6DG042900 Rh6DG163400 Rh7AG089300 Rh7AG227400 Rh7AG275600 Rh7AG375100 Rh7AG460900 Rh7AG485200 Rh7BG146100 Rh7BG354300 Rh7CG077100 Rh7CG294500 Rh7CG393800 Rh7DG041700 Rh7DG062700 Rh7DG091700 Rh7DG178900 Rh7DG192300 Rh7DG297000 Rh7DG403600 Rh7DG411800
rosa_wichuraiana Rw0G007100 Rw0G011430 Rw1G003580 Rw1G004040 Rw1G005880 Rw1G009860 Rw1G009990 Rw1G012190 Rw1G012200 Rw1G013740 Rw1G013750 Rw1G016710 Rw1G021050 Rw2G023790 Rw2G028810 Rw2G035890 Rw2G036250 Rw4G008880 Rw4G014380 Rw4G014390 Rw4G016020 Rw4G037160 Rw5G010060 Rw5G030620 Rw5G033840 Rw5G049840 Rw5G049850 Rw6G003450 Rw6G015080 Rw7G019640 Rw7G024060 Rw7G024070 Rw7G029090 Rw7G037010 Rw7G039170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 580
AciI CCGC 1 cut(s) 5
AclWI GGATC 3 cut(s) 18, 889, 1311
AcoI YGGCCR 1 cut(s) 304
AcsI RAATTY 4 cut(s) 426, 652, 727, 974
AfaI GTAC 2 cut(s) 487, 802
AfiI CCNNNNNNNGG 3 cut(s) 187, 256, 824
AflII CTTAAG 1 cut(s) 194
AgsI TTSAA 7 cut(s) 479, 530, 718, 838, 1112, 1148, 1385
AhlI ACTAGT 1 cut(s) 899
AjnI CCWGG 2 cut(s) 334, 639
AleI CACNNNNGTG 1 cut(s) 1004
AluBI AGCT 7 cut(s) 93, 133, 210, 809, 1049, 1355, 1362
AluI AGCT 7 cut(s) 93, 133, 210, 809, 1049, 1355, 1362
Alw21I GWGCWC 2 cut(s) 95, 279
AlwI GGATC 3 cut(s) 18, 889, 1311
AoxI GGCC 4 cut(s) 104, 304, 481, 1082
ApeKI GCWGC 2 cut(s) 662, 1123
ApoI RAATTY 4 cut(s) 426, 652, 727, 974
AseI ATTAAT 2 cut(s) 513, 1269
AspS9I GGNCC 3 cut(s) 200, 287, 1082
AsuHPI GGTGA 2 cut(s) 355, 982
AvaII GGWCC 2 cut(s) 200, 287
BaeGI GKGCMC 1 cut(s) 193
BalI TGGCCA 1 cut(s) 306
BanII GRGCYC 2 cut(s) 95, 1139
BauI CACGAG 1 cut(s) 987
BbsI GAAGAC 1 cut(s) 167
Bbv12I GWGCWC 2 cut(s) 95, 279
BbvI GCAGC 2 cut(s) 649, 1110
BccI CCATC 3 cut(s) 180, 1255, 1370
BceAI ACGGC 2 cut(s) 468, 1373
BciT130I CCWGG 2 cut(s) 336, 641
BciVI GTATCC 1 cut(s) 787
BcuI ACTAGT 1 cut(s) 899
BfaI CTAG 5 cut(s) 221, 900, 909, 1056, 1349
BfrI CTTAAG 1 cut(s) 194
BfuAI ACCTGC 1 cut(s) 580
BfuI GTATCC 1 cut(s) 787
BglI GCCNNNNNGGC 1 cut(s) 1394
BglII AGATCT 2 cut(s) 167, 217
BisI GCNGC 2 cut(s) 663, 1124
BlpI GCTNAGC 2 cut(s) 450, 1398
BlsI GCNGC 2 cut(s) 664, 1125
Bme1390I CCNGG 2 cut(s) 336, 641
Bme18I GGWCC 2 cut(s) 200, 287
BmgT120I GGNCC 3 cut(s) 200, 287, 1082
BmiI GGNNCC 3 cut(s) 201, 594, 684
BmrFI CCNGG 2 cut(s) 336, 641
BmsI GCATC 3 cut(s) 376, 684, 1279
BpiI GAAGAC 1 cut(s) 167
BpmI CTGGAG 1 cut(s) 164
Bpu1102I GCTNAGC 2 cut(s) 450, 1398
BsaAI YACGTR 1 cut(s) 274
BsaBI GATNNNNATC 1 cut(s) 1302
BsaJI CCNNGG 5 cut(s) 107, 290, 335, 722, 1041
BsaXI ACNNNNNCTCC 3 cut(s) 29, 695, 725
Bsc4I CCNNNNNNNGG 3 cut(s) 187, 256, 824
Bse1I ACTGG 3 cut(s) 286, 802, 1348
Bse3DI GCAATG 1 cut(s) 237
Bse8I GATNNNNATC 1 cut(s) 1302
BseBI CCWGG 2 cut(s) 336, 641
BseDI CCNNGG 5 cut(s) 107, 290, 335, 722, 1041
BseGI GGATG 3 cut(s) 391, 542, 714
BseJI GATNNNNATC 1 cut(s) 1302
BseLI CCNNNNNNNGG 3 cut(s) 187, 256, 824
BseMI GCAATG 1 cut(s) 237
BseMII CTCAG 4 cut(s) 90, 178, 412, 1389
BseNI ACTGG 3 cut(s) 286, 802, 1348
BseRI GAGGAG 3 cut(s) 368, 866, 876
BseSI GKGCMC 1 cut(s) 193
BseXI GCAGC 2 cut(s) 649, 1110
BseYI CCCAGC 2 cut(s) 965, 1079
BshFI GGCC 4 cut(s) 106, 306, 483, 1084
BsiHKAI GWGCWC 2 cut(s) 95, 279
BslI CCNNNNNNNGG 3 cut(s) 187, 256, 824
BsnI GGCC 4 cut(s) 106, 306, 483, 1084
Bsp1286I GDGCHC 4 cut(s) 95, 193, 279, 1139
Bsp143I GATC 7 cut(s) 10, 167, 217, 360, 769, 881, 1303
Bsp1720I GCTNAGC 2 cut(s) 450, 1398
BspACI CCGC 1 cut(s) 5
BspANI GGCC 4 cut(s) 106, 306, 483, 1084
BspCNI CTCAG 4 cut(s) 89, 177, 411, 1390
BspHI TCATGA 2 cut(s) 1102, 1237
BspLI GGNNCC 3 cut(s) 201, 594, 684
BspMI ACCTGC 1 cut(s) 580
BspPI GGATC 3 cut(s) 18, 889, 1311
BspTI CTTAAG 1 cut(s) 194
BsrDI GCAATG 1 cut(s) 237
BsrI ACTGG 3 cut(s) 286, 802, 1348
BssECI CCNNGG 5 cut(s) 107, 290, 335, 722, 1041
BssMI GATC 7 cut(s) 10, 167, 217, 360, 769, 881, 1303
BssSI CACGAG 1 cut(s) 987
BssT1I CCWWGG 3 cut(s) 107, 290, 722
Bst2BI CACGAG 1 cut(s) 987
Bst2UI CCWGG 2 cut(s) 336, 641
Bst4CI ACNGT 1 cut(s) 637
Bst6I CTCTTC 1 cut(s) 861
BstAFI CTTAAG 1 cut(s) 194
BstBAI YACGTR 1 cut(s) 274
BstC8I GCNNGC 2 cut(s) 304, 579
BstDEI CTNAG 7 cut(s) 76, 164, 398, 450, 773, 951, 1398
BstDSI CCRYGG 1 cut(s) 1041
BstENI CCTNNNNNAGG 1 cut(s) 254
BstF5I GGATG 3 cut(s) 391, 542, 714
BstKTI GATC 7 cut(s) 13, 170, 220, 363, 772, 884, 1306
BstMBI GATC 7 cut(s) 10, 167, 217, 360, 769, 881, 1303
BstMWI GCNNNNNNNGC 1 cut(s) 1394
BstNI CCWGG 2 cut(s) 336, 641
BstNSI RCATGY 1 cut(s) 1406
BstSCI CCNGG 2 cut(s) 334, 639
BstSLI GKGCMC 1 cut(s) 193
BstV1I GCAGC 2 cut(s) 649, 1110
BstV2I GAAGAC 1 cut(s) 167
BstX2I RGATCY 3 cut(s) 167, 217, 881
BstXI CCANNNNNNTGG 1 cut(s) 1042
BstYI RGATCY 3 cut(s) 167, 217, 881
BsuI GTATCC 1 cut(s) 787
BsuRI GGCC 4 cut(s) 106, 306, 483, 1084
BtgI CCRYGG 1 cut(s) 1041
BtgZI GCGATG 1 cut(s) 42
BtsCI GGATG 3 cut(s) 391, 542, 714
BtsIMutI CAGTG 2 cut(s) 279, 1261
BveI ACCTGC 1 cut(s) 580
Cac8I GCNNGC 2 cut(s) 304, 579
CciI TCATGA 2 cut(s) 1102, 1237
Cfr13I GGNCC 3 cut(s) 200, 287, 1082
Csp6I GTAC 2 cut(s) 486, 801
CviAII CATG 7 cut(s) 136, 548, 1002, 1103, 1238, 1373, 1403
CviQI GTAC 2 cut(s) 486, 801
DdeI CTNAG 7 cut(s) 76, 164, 398, 450, 773, 951, 1398
DpnI GATC 7 cut(s) 12, 169, 219, 362, 771, 883, 1305
DpnII GATC 7 cut(s) 10, 167, 217, 360, 769, 881, 1303
DraI TTTAAA 1 cut(s) 1012
EaeI YGGCCR 1 cut(s) 304
Eam1104I CTCTTC 1 cut(s) 861
EarI CTCTTC 1 cut(s) 861
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 93
Eco130I CCWWGG 3 cut(s) 107, 290, 722
Eco24I GRGCYC 2 cut(s) 95, 1139
Eco32I GATATC 1 cut(s) 1252
Eco47I GGWCC 2 cut(s) 200, 287
Eco53kI GAGCTC 1 cut(s) 93
EcoICRI GAGCTC 1 cut(s) 93
EcoNI CCTNNNNNAGG 1 cut(s) 254
EcoO109I RGGNCCY 1 cut(s) 200
EcoRII CCWGG 2 cut(s) 334, 639
EcoRV GATATC 1 cut(s) 1252
EcoT14I CCWWGG 3 cut(s) 107, 290, 722
EcoT38I GRGCYC 2 cut(s) 95, 1139
ErhI CCWWGG 3 cut(s) 107, 290, 722
FaeI CATG 7 cut(s) 139, 551, 1005, 1106, 1241, 1376, 1406
FatI CATG 7 cut(s) 135, 547, 1001, 1102, 1237, 1372, 1402
FauNDI CATATG 2 cut(s) 369, 490
Fnu4HI GCNGC 2 cut(s) 663, 1124
FokI GGATG 3 cut(s) 398, 549, 721
FriOI GRGCYC 2 cut(s) 95, 1139
Fsp4HI GCNGC 2 cut(s) 663, 1124
FspBI CTAG 5 cut(s) 221, 900, 909, 1056, 1349
GluI GCNGC 2 cut(s) 663, 1124
GsaI CCCAGC 2 cut(s) 969, 1083
GsuI CTGGAG 1 cut(s) 164
HaeIII GGCC 4 cut(s) 106, 306, 483, 1084
Hin1II CATG 7 cut(s) 139, 551, 1005, 1106, 1241, 1376, 1406
HinfI GANTC 5 cut(s) 557, 599, 905, 992, 1334
HphI GGTGA 2 cut(s) 355, 982
Hpy188I TCNGA 6 cut(s) 167, 604, 1141, 1288, 1324, 1339
Hpy188III TCNNGA 8 cut(s) 181, 221, 596, 989, 1103, 1148, 1238, 1247
HpyAV CCTTC 5 cut(s) 343, 473, 754, 1214, 1293
HpyCH4III ACNGT 1 cut(s) 637
HpyCH4IV ACGT 1 cut(s) 273
HpyCH4V TGCA 4 cut(s) 577, 697, 1126, 1408
HpyF10VI GCNNNNNNNGC 1 cut(s) 1394
HpyF3I CTNAG 7 cut(s) 76, 164, 398, 450, 773, 951, 1398
HpySE526I ACGT 1 cut(s) 273
Hsp92II CATG 7 cut(s) 139, 551, 1005, 1106, 1241, 1376, 1406
Kzo9I GATC 7 cut(s) 10, 167, 217, 360, 769, 881, 1303
Lsp1109I GCAGC 2 cut(s) 649, 1110
LweI GCATC 3 cut(s) 376, 684, 1279
MaeI CTAG 5 cut(s) 221, 900, 909, 1056, 1349
MaeII ACGT 1 cut(s) 273
MaeIII GTNAC 2 cut(s) 316, 989
MalI GATC 7 cut(s) 12, 169, 219, 362, 771, 883, 1305
MboI GATC 7 cut(s) 10, 167, 217, 360, 769, 881, 1303
MboII GAAGA 5 cut(s) 167, 272, 370, 748, 878
MflI RGATCY 3 cut(s) 167, 217, 881
MhlI GDGCHC 4 cut(s) 95, 193, 279, 1139
MlsI TGGCCA 1 cut(s) 306
MluNI TGGCCA 1 cut(s) 306
MlyI GAGTC 3 cut(s) 608, 986, 1343
Mox20I TGGCCA 1 cut(s) 306
MscI TGGCCA 1 cut(s) 306
MslI CAYNNNNRTG 3 cut(s) 325, 368, 1004
Msp20I TGGCCA 1 cut(s) 306
MspCI CTTAAG 1 cut(s) 194
MspR9I CCNGG 2 cut(s) 336, 641
MvaI CCWGG 2 cut(s) 336, 641
MwoI GCNNNNNNNGC 1 cut(s) 1394
NdeI CATATG 2 cut(s) 369, 490
NdeII GATC 7 cut(s) 10, 167, 217, 360, 769, 881, 1303
NlaIII CATG 7 cut(s) 139, 551, 1005, 1106, 1241, 1376, 1406
NlaIV GGNNCC 3 cut(s) 201, 594, 684
NmuCI GTSAC 2 cut(s) 316, 989
NspI RCATGY 1 cut(s) 1406
OliI CACNNNNGTG 1 cut(s) 1004
PagI TCATGA 2 cut(s) 1102, 1237
PfeI GAWTC 2 cut(s) 557, 905
PkrI GCNGC 2 cut(s) 664, 1125
PleI GAGTC 3 cut(s) 607, 986, 1342
PpsI GAGTC 3 cut(s) 607, 986, 1342
Ppu21I YACGTR 1 cut(s) 274
PpuMI RGGWCCY 1 cut(s) 200
PshBI ATTAAT 2 cut(s) 513, 1269
Psp124BI GAGCTC 1 cut(s) 95
Psp5II RGGWCCY 1 cut(s) 200
Psp6I CCWGG 2 cut(s) 334, 639
PspFI CCCAGC 2 cut(s) 965, 1079
PspGI CCWGG 2 cut(s) 334, 639
PspN4I GGNNCC 3 cut(s) 201, 594, 684
PspPI GGNCC 3 cut(s) 200, 287, 1082
PspPPI RGGWCCY 1 cut(s) 200
PsuI RGATCY 3 cut(s) 167, 217, 881
RsaI GTAC 2 cut(s) 487, 802
RsaNI GTAC 2 cut(s) 486, 801
RseI CAYNNNNRTG 3 cut(s) 325, 368, 1004
SacI GAGCTC 1 cut(s) 95
SatI GCNGC 2 cut(s) 663, 1124
Sau3AI GATC 7 cut(s) 10, 167, 217, 360, 769, 881, 1303
Sau96I GGNCC 3 cut(s) 200, 287, 1082
SchI GAGTC 3 cut(s) 608, 986, 1343
ScrFI CCNGG 2 cut(s) 336, 641
SduI GDGCHC 4 cut(s) 95, 193, 279, 1139
SfaNI GCATC 3 cut(s) 376, 684, 1279
SinI GGWCC 2 cut(s) 200, 287
SmiMI CAYNNNNRTG 3 cut(s) 325, 368, 1004
SmlI CTYRAG 1 cut(s) 194
SmoI CTYRAG 1 cut(s) 194
SpeI ACTAGT 1 cut(s) 899
SsiI CCGC 1 cut(s) 5
SspMI CTAG 5 cut(s) 221, 900, 909, 1056, 1349
SstI GAGCTC 1 cut(s) 95
StyD4I CCNGG 2 cut(s) 334, 639
StyI CCWWGG 3 cut(s) 107, 290, 722
TaaI ACNGT 1 cut(s) 637
TaiI ACGT 1 cut(s) 276
TaqI TCGA 1 cut(s) 424
TfiI GAWTC 2 cut(s) 557, 905
TscAI CASTG 2 cut(s) 286, 1261
TseFI GTSAC 2 cut(s) 316, 989
TseI GCWGC 2 cut(s) 662, 1123
Tsp45I GTSAC 2 cut(s) 316, 989
TspDTI ATGAA 3 cut(s) 226, 457, 1254
TspGWI ACGGA 1 cut(s) 1030
TspRI CASTG 2 cut(s) 286, 1261
Vha464I CTTAAG 1 cut(s) 194
VpaK11BI GGWCC 2 cut(s) 200, 287
VspI ATTAAT 2 cut(s) 513, 1269
XagI CCTNNNNNAGG 1 cut(s) 254
XapI RAATTY 4 cut(s) 426, 652, 727, 974
XbaI TCTAGA 1 cut(s) 220
XceI RCATGY 1 cut(s) 1406
XspI CTAG 5 cut(s) 221, 900, 909, 1056, 1349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.