Rw1G016710

Domain of unknown function (DUF4283)

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
37246284 .. 37248044
1761 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G016710.1

Sequence Viewer

Length: 1761 bp
ATGGCTTCACCGGAAACCGTTAACCACCCCGCTCCGATGAGCTATGCAAACTCGCTAATGCAGCCATTGGGACGACTATCGACTGCAATGATGGCAGATTTTGTTCTTGGTGAAGATGACTACAAAATTACTGAGGGTAAGCTTGGACCCAATATTTCTTTTTCACAAAGAGTAGAAGATAAGCTTGATTTGGATTGGTCATGTGCTGTAATTATCAAATTGATGGGTCGACCTAATACTGAGAATGCTTATGATTTTATGAAGAAAGCTTTAACCCGAAAATGGACTTTGAGGGGACCTTGGCAGCTTATTGATGTACCCAACTCATTTTTCATTGTTAAGTTCAACTTGTATGAAGATATGGAGTATGCTTTGTGCAATGGACCCTGGATAATTGCTGGGCAAACTCTAGTGGTACAGAAATGGCGCCCAGATTTTGACCCTGCTGAGGAGAAGATTAATTGTATGGCTATCTGGACCAGAATTAATGGGTTGCCTGTGAAATACTTCAAACAATACACAATGGAGAAGGTTGGTCAAATGCTGGGTAAGGTTGTCAAGGTTGATCAACATACCCTGGCTCAGGCAAGAGGTAAGTTCTGTCGAATTTGTGTAGAAGTAAATCTGAATGAGCCATTGAAACCTTTTGTTGAACTTGATGGCAAACCTTATGGGGTTGTATATGAAGGCATATCCACCATTTGCTTCAATTGTGGTGTGTATGGGCACGTCAAAGACCATTGTCCGTATGCGAAAGCTGCAGAATCTGCTAAGCCAACTGTTAATGATGTTCCTATGGTGTCTACTCGTCCAGATACTATTGATGAACCTATTACCAAACCATCTGATGGTGGCCTCCAATCAGCTGATAATGTGACAGTGAGTGAGGCTTCACAGAAGAATAGCTACATGGCACCTACCAATACTGGAACTGAGACGAACAAGGCCAAAATGGGTCCCTGGATGATTATGAACTACAAGAACAGAAAAGGAAACAATGCGAATCAACGGAATTACAAAGAAAAGATTGATACTGGATCTAGATTTACACCTCTGCAGACTGATGTCAATGAATCTGGTGAAGTCTCAAACATGACACAAACTCCTACCAAACCTGGGAATGGAAATAATGATGTAACGAATGAACCAAAGATTGTGAAATTTTGGAAGCGAGTACAGGAGAAGTCTGATATGGCTCTGTCAAATGATCACACATTGAAGAGTAAGACTACCAAGGAGGATAAGAAATTGAAAAGCAATGCTACTATGGAAGACAACATTTCTATTTCTGCTAGGAAAGATGTTTCTAATGCTCGTGTTCCTTTGTCAGAGATTTCAAATCATAGAAGTGAGGTTAGTTTTGGTGCCTCTGTTTCTAAGATAAATGGTGCTAGAAAGGGGGGTAAGTTTGCTATTTCTTCTTCTGCTAATAACCTTGTCCGTTCCCCAATAATGAAAGGAGTGTTTAAAAGTGAAACTGCAAAGATTGGGTCTGGTTTCACTCTTGAAAGTCTCAAGAGTGGAACTTTCATGTGTACTGATGCAACTTTTGGACACTCACTACCTGAGGAAAACACTAGAAATATGGATCCCATTAGTGGACCTGATGTTCACATTATTGGTGAGAAGAATCACCAGAACCAGTTGGGTTCAAATGTAATTATGCAGGTGATTACTGTAGAAAGTGATATTTCTGATAACATGGCTTCTATTAAGTCAAACCAGTCCTCTCCTCATGGAGAGGATATGGTTGTTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

586

Amino Acids

64.91

Weight (kDa)

8.18

Isoelectric Point (pI)

28.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 65 - 150 1.7e-12 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01050
fragaria_vesca FvH4_1g24181 FvH4_1g28741 FvH4_1g29781 FvH4_2g00621 FvH4_2g04885 FvH4_2g11953 FvH4_2g11954 FvH4_2g12001 FvH4_2g12002 FvH4_2g12222 FvH4_2g12223 FvH4_2g38351 FvH4_3g04401 FvH4_3g31330 FvH4_3g33091 FvH4_4g11461 FvH4_5g27993 FvH4_5g27994 FvH4_5g28072 FvH4_5g28231 FvH4_5g28591 FvH4_5g34261 FvH4_6g18162 FvH4_6g25500 FvH4_6g25561 FvH4_6g25792 FvH4_6g27602 FvH4_6g46881
malus_domestica MD03G1019700.v1.1
prunus_persica Prupe.1G055400_v2.0.a1 Prupe.1G179200_v2.0.a1 Prupe.1G208200_v2.0.a1 Prupe.1G231200_v2.0.a1 Prupe.2G044900_v2.0.a1 Prupe.2G055100_v2.0.a1 Prupe.2G097600_v2.0.a1 Prupe.2G114200_v2.0.a1 Prupe.3G109000_v2.0.a1 Prupe.3G109300_v2.0.a1 Prupe.3G109600_v2.0.a1 Prupe.4G246900_v2.0.a1 Prupe.5G026400_v2.0.a1
pyrus_communis pycom05g17130 pycom07g06820 pycom07g18590 pycom07g22730 pycom12401g00120 pycom12401g00180 pycom420g00470
rosa_chinensis RchiOBHm_Chr1g0342591 RchiOBHm_Chr1g0342601 RchiOBHm_Chr1g0342611 RchiOBHm_Chr1g0351011 RchiOBHm_Chr2g0146151 RchiOBHm_Chr2g0171821 RchiOBHm_Chr3g0492921 RchiOBHm_Chr3g0492931 RchiOBHm_Chr4g0406871 RchiOBHm_Chr4g0426311 RchiOBHm_Chr5g0020721 RchiOBHm_Chr5g0050111 RchiOBHm_Chr5g0051681 RchiOBHm_Chr5g0053531 RchiOBHm_Chr5g0054841 RchiOBHm_Chr5g0055061 RchiOBHm_Chr5g0055071 RchiOBHm_Chr6g0248911 RchiOBHm_Chr6g0291741 RchiOBHm_Chr7g0187781 RchiOBHm_Chr7g0220081 RchiOBHm_Chr7g0224391 RchiOBHm_Chr7g0235221
rosa_laevigata RLG00000002133 RLG00000002402 RLG00000002736 RLG00000011046 RLG00000013214 RLG00000016550 RLG00000021669 RLG00000022948 RLG00000023691 RLG00000024682 RLG00000027826 RLG00000029734 RLG00000029831 RLG00000030305 RLG00000037042
rosa_multiflora Rmu_co7992532.1_g000001 Rmu_co8021462.1_g000001 Rmu_co8229237.1_g000001 Rmu_co8281571.1_g000001 Rmu_co8326451.1_g000001 Rmu_co8359553.1_g000001 Rmu_co8372117.1_g000001 Rmu_co8427177.1_g000001 Rmu_co8474063.1_g000002 Rmu_sc0000007.1_g000020 Rmu_sc0000173.1_g000002 Rmu_sc0000367.1_g000086 Rmu_sc0000367.1_g000088 Rmu_sc0000559.1_g000002 Rmu_sc0000733.1_g000014 Rmu_sc0000745.1_g000006 Rmu_sc0000791.1_g000046 Rmu_sc0000791.1_g000049 Rmu_sc0000824.1_g000010 Rmu_sc0000824.1_g000011 Rmu_sc0000834.1_g000009 Rmu_sc0000834.1_g000011 Rmu_sc0000911.1_g000020 Rmu_sc0000935.1_g000034 Rmu_sc0000935.1_g000051 Rmu_sc0000935.1_g000053 Rmu_sc0001000.1_g000005 Rmu_sc0001000.1_g000006 Rmu_sc0001150.1_g000004 Rmu_sc0001227.1_g000002 Rmu_sc0001322.1_g000018 Rmu_sc0001343.1_g000001 Rmu_sc0001356.1_g000004 Rmu_sc0001356.1_g000005 Rmu_sc0001363.1_g000007 Rmu_sc0001463.1_g000012 Rmu_sc0001484.1_g000023 Rmu_sc0001516.1_g000003 Rmu_sc0001516.1_g000005 Rmu_sc0001619.1_g000005 Rmu_sc0001648.1_g000032 Rmu_sc0001648.1_g000035 Rmu_sc0001694.1_g000008 Rmu_sc0001809.1_g000023 Rmu_sc0002093.1_g000027 Rmu_sc0002231.1_g000004 Rmu_sc0002245.1_g000001 Rmu_sc0002245.1_g000003 Rmu_sc0002354.1_g000045 Rmu_sc0002354.1_g000048 Rmu_sc0002368.1_g000014 Rmu_sc0002368.1_g000016 Rmu_sc0002368.1_g000017 Rmu_sc0002401.1_g000030 Rmu_sc0002487.1_g000012 Rmu_sc0002798.1_g000028 Rmu_sc0002923.1_g000012 Rmu_sc0002960.1_g000002 Rmu_sc0003033.1_g000072 Rmu_sc0003133.1_g000015 Rmu_sc0003168.1_g000007 Rmu_sc0003945.1_g000002 Rmu_sc0003945.1_g000004 Rmu_sc0003945.1_g000005 Rmu_sc0003979.1_g000004 Rmu_sc0004005.1_g000007 Rmu_sc0004059.1_g000018 Rmu_sc0004064.1_g000001 Rmu_sc0004083.1_g000007 Rmu_sc0004083.1_g000008 Rmu_sc0004354.1_g000033 Rmu_sc0004368.1_g000035 Rmu_sc0004483.1_g000032 Rmu_sc0004646.1_g000012 Rmu_sc0005014.1_g000006 Rmu_sc0005016.1_g000046 Rmu_sc0005016.1_g000051 Rmu_sc0005033.1_g000005 Rmu_sc0005033.1_g000007 Rmu_sc0005065.1_g000002 Rmu_sc0005065.1_g000004 Rmu_sc0005168.1_g000012 Rmu_sc0005238.1_g000001 Rmu_sc0005365.1_g000012 Rmu_sc0005631.1_g000005 Rmu_sc0005704.1_g000013 Rmu_sc0005704.1_g000014 Rmu_sc0005781.1_g000030 Rmu_sc0005789.1_g000016 Rmu_sc0006185.1_g000001 Rmu_sc0006185.1_g000002 Rmu_sc0006266.1_g000044 Rmu_sc0006561.1_g000018 Rmu_sc0006695.1_g000016 Rmu_sc0007739.1_g000022 Rmu_sc0008050.1_g000013 Rmu_sc0008169.1_g000006 Rmu_sc0008855.1_g000006 Rmu_sc0009298.1_g000002 Rmu_sc0009495.1_g000005 Rmu_sc0010608.1_g000003 Rmu_sc0010958.1_g000005 Rmu_sc0011506.1_g000001 Rmu_sc0011790.1_g000002 Rmu_sc0011790.1_g000003 Rmu_sc0012042.1_g000004 Rmu_sc0012042.1_g000005 Rmu_sc0012140.1_g000020 Rmu_sc0012726.1_g000005 Rmu_sc0012746.1_g000023 Rmu_sc0013193.1_g000002 Rmu_sc0013193.1_g000003 Rmu_sc0017997.1_g000001 Rmu_sc0021401.1_g000001 Rmu_sc0025959.1_g000001 Rmu_sc0026403.1_g000003 Rmu_sc0028616.1_g000002 Rmu_sc0029801.1_g000002 Rmu_sc0032453.1_g000001 Rmu_sc0033672.1_g000002 Rmu_sc0034553.1_g000001 Rmu_sc0036883.1_g000001 Rmu_ssc0000096.1_g000001 Rmu_ssc0000158.1_g000031 Rmu_ssc0000291.1_g000034 Rmu_ssc0000381.1_g000026 Rmu_ssc0000387.1_g000010 Rmu_ssc0000474.1_g000002 Rmu_ssc0000474.1_g000004
rosa_roxburghii Rroxscaffold_1G00020090 Rroxscaffold_1G00020100 Rroxscaffold_1G00022940 Rroxscaffold_1G00044600 Rroxscaffold_1G00054420 Rroxscaffold_1G00054430 Rroxscaffold_1G00056440 Rroxscaffold_2G00090180 Rroxscaffold_2G00101250 Rroxscaffold_2G00110600 Rroxscaffold_2G00152800 Rroxscaffold_4G00320370 Rroxscaffold_4G00320640 Rroxscaffold_4G00322420 Rroxscaffold_4G00324670 Rroxscaffold_5G00332760 Rroxscaffold_5G00345010 Rroxscaffold_5G00345020 Rroxscaffold_5G00355470 Rroxscaffold_5G00385520 Rroxscaffold_6G00394610 Rroxscaffold_6G00394700 Rroxscaffold_7G00164190 Rroxscaffold_7G00182750 Rroxscaffold_7G00183540 Rroxscaffold_7G00203520 Rroxscaffold_7G00211630
rosa_rugosa Rorug01G0041400 Rorug01G0041500 Rorug01G0065300 Rorug01G0065300 Rorug01G0069700 Rorug01G0069800 Rorug01G0070300 Rorug01G0072300 Rorug01G0072900 Rorug01G0093100 Rorug01G0147100.1 Rorug01G0196900 Rorug01G0259700 Rorug02G0162000 Rorug02G0182700 Rorug02G0212300 Rorug02G0214700 Rorug02G0229900 Rorug02G0246100 Rorug02G0257400 Rorug02G0259100 Rorug02G0341400 Rorug02G0341500 Rorug02G0341700 Rorug02G0341800 Rorug02G0355600 Rorug02G0386100 Rorug02G0386100 Rorug02G0387000 Rorug02G0387100 Rorug02G0388400 Rorug02G0388500 Rorug02G0429100 Rorug02G0429100 Rorug02G0455300 Rorug02G0634400 Rorug03G0163200 Rorug03G0198500 Rorug03G0199600 Rorug03G0204000 Rorug03G0265600 Rorug03G0266100 Rorug03G0266200 Rorug03G0280600 Rorug03G0348200 Rorug03G0349700 Rorug03G0349800 Rorug04G0020200 Rorug04G0073700 Rorug04G0215000 Rorug04G0426100 Rorug05G0064200 Rorug05G0064300 Rorug05G0265700 Rorug05G0287400 Rorug05G0287500 Rorug05G0287500 Rorug05G0405000 Rorug05G0525700 Rorug05G0525800 Rorug05G0588200 Rorug06G0038200 Rorug06G0057900 Rorug06G0058000 Rorug06G0058500 Rorug06G0058600 Rorug06G0116700 Rorug06G0159300.1 Rorug06G0159400 Rorug06G0174700 Rorug06G0375500 Rorug07G0091400 Rorug07G0094900 Rorug07G0108100 Rorug07G0140700 Rorug07G0140700 Rorug07G0207100 Rorug07G0207100 Rorug07G0207200 Rorug07G0287300
rosa_samantha Rh1AG100100 Rh1AG104500 Rh1BG150700 Rh1BG237700 Rh1BG334000 Rh1CG090000 Rh1CG100100 Rh1CG347300 Rh1DG090500 Rh1DG096100 Rh1DG107400 Rh1DG182500 Rh1DG265700 Rh1DG365200 Rh2BG256800 Rh2BG361300 Rh2BG468600 Rh2BG549800 Rh2CG270900 Rh2DG276700 Rh2DG276800 Rh2DG377700 Rh2DG477900 Rh3AG161200 Rh3BG138800 Rh3BG185700 Rh3BG269600 Rh3CG176000 Rh4AG006100 Rh4AG216700 Rh4AG355800 Rh4CG108600 Rh5AG141700 Rh5AG480000 Rh5BG014500 Rh5BG134600 Rh5BG295400 Rh5BG552900 Rh5CG058600 Rh5CG286400 Rh5CG350900 Rh5CG575800 Rh5DG004300 Rh5DG254600 Rh5DG356500 Rh6AG106500 Rh6AG191100 Rh6AG224700 Rh6BG074700 Rh6BG181400 Rh6BG352200 Rh6BG408400 Rh6BG453600 Rh6CG047400 Rh6CG172200 Rh6CG189400 Rh6CG515800 Rh6DG042900 Rh6DG163400 Rh7AG089300 Rh7AG227400 Rh7AG275600 Rh7AG375100 Rh7AG460900 Rh7AG485200 Rh7BG146100 Rh7BG354300 Rh7CG077100 Rh7CG294500 Rh7CG393800 Rh7DG041700 Rh7DG062700 Rh7DG091700 Rh7DG178900 Rh7DG192300 Rh7DG297000 Rh7DG403600 Rh7DG411800
rosa_wichuraiana Rw0G007100 Rw0G011430 Rw1G003580 Rw1G004040 Rw1G005880 Rw1G009860 Rw1G009990 Rw1G012190 Rw1G012200 Rw1G013740 Rw1G013750 Rw1G016710 Rw1G021050 Rw2G023790 Rw2G028810 Rw2G035890 Rw2G036250 Rw4G008880 Rw4G014380 Rw4G014390 Rw4G016020 Rw4G037160 Rw5G010060 Rw5G030620 Rw5G033840 Rw5G049840 Rw5G049850 Rw6G003450 Rw6G015080 Rw7G019640 Rw7G024060 Rw7G024070 Rw7G029090 Rw7G037010 Rw7G039170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1657
Acc36I ACCTGC 1 cut(s) 1657
AccB1I GGYRCC 3 cut(s) 426, 913, 1364
AccB7I CCANNNNNTGG 1 cut(s) 848
AccBSI CCGCTC 1 cut(s) 32
AccI GTMKAC 2 cut(s) 229, 803
AciI CCGC 1 cut(s) 30
AclWI GGATC 3 cut(s) 1045, 1583, 1596
AcsI RAATTY 2 cut(s) 606, 1160
AcyI GRCGYC 1 cut(s) 427
AfaI GTAC 4 cut(s) 318, 417, 1176, 1537
AfiI CCNNNNNNNGG 7 cut(s) 282, 448, 583, 848, 1116, 1121, 1598
AjiI CACGTC 1 cut(s) 730
AjnI CCWGG 4 cut(s) 386, 576, 959, 1114
AjuI GAANNNNNNNTTGG 2 cut(s) 314, 346
AloI GAACNNNNNNTCC 2 cut(s) 1593, 1625
AluBI AGCT 8 cut(s) 42, 142, 184, 269, 307, 758, 866, 906
AluI AGCT 8 cut(s) 42, 142, 184, 269, 307, 758, 866, 906
Alw26I GTCTC 3 cut(s) 929, 1090, 1517
AlwI GGATC 3 cut(s) 1045, 1583, 1596
AlwNI CAGNNNCTG 1 cut(s) 767
AoxI GGCC 2 cut(s) 853, 945
ApeKI GCWGC 3 cut(s) 61, 304, 758
ApoI RAATTY 2 cut(s) 606, 1160
ArsI GACNNNNNNTTYG 2 cut(s) 1475, 1507
AseI ATTAAT 2 cut(s) 459, 486
Asp700I GAANNNNTTC 1 cut(s) 506
AspLEI GCGC 1 cut(s) 429
AspS9I GGNCC 6 cut(s) 146, 296, 383, 477, 956, 1601
AsuHPI GGTGA 5 cut(s) 122, 1091, 1625, 1634, 1681
AvaII GGWCC 6 cut(s) 146, 296, 383, 477, 956, 1601
AxyI CCTNAGG 1 cut(s) 1566
BaeGI GKGCMC 1 cut(s) 729
BamHI GGATCC 1 cut(s) 1588
BanI GGYRCC 3 cut(s) 426, 913, 1364
BarI GAAGNNNNNNTAC 2 cut(s) 890, 922
BauI CACGAG 1 cut(s) 1314
BbsI GAAGAC 1 cut(s) 1278
BbvCI CCTCAGC 1 cut(s) 447
BbvI GCAGC 3 cut(s) 73, 316, 745
BccI CCATC 5 cut(s) 85, 217, 653, 842, 850
BciT130I CCWGG 4 cut(s) 388, 578, 961, 1116
BclI TGATCA 2 cut(s) 565, 1207
BcoDI GTCTC 3 cut(s) 929, 1090, 1517
BfaI CTAG 5 cut(s) 410, 1041, 1293, 1392, 1578
BfmI CTRYAG 3 cut(s) 759, 1055, 1677
BfoI RGCGCY 1 cut(s) 430
BfuAI ACCTGC 1 cut(s) 1657
BisI GCNGC 3 cut(s) 62, 305, 759
BlpI GCTNAGC 1 cut(s) 771
BlsI GCNGC 3 cut(s) 63, 306, 760
Bme1390I CCNGG 4 cut(s) 388, 578, 961, 1116
Bme18I GGWCC 6 cut(s) 146, 296, 383, 477, 956, 1601
BmgBI CACGTC 1 cut(s) 730
BmgT120I GGNCC 6 cut(s) 146, 296, 383, 477, 956, 1601
BmiI GGNNCC 9 cut(s) 148, 297, 385, 428, 915, 957, 958, 1366, 1590
BmrFI CCNGG 4 cut(s) 388, 578, 961, 1116
BmsI GCATC 1 cut(s) 1531
BoxI GACNNNNGTC 2 cut(s) 741, 1064
BpiI GAAGAC 1 cut(s) 1278
Bpu10I CCTNAGC 2 cut(s) 447, 582
Bpu1102I GCTNAGC 1 cut(s) 771
BpuEI CTTGAG 1 cut(s) 1499
BsaHI GRCGYC 1 cut(s) 427
BsaJI CCNNGG 6 cut(s) 299, 386, 576, 959, 1115, 1233
BsaWI WCCGGW 1 cut(s) 10
BsaXI ACNNNNNCTCC 2 cut(s) 1087, 1117
Bsc4I CCNNNNNNNGG 7 cut(s) 282, 448, 583, 848, 1116, 1121, 1598
Bse1I ACTGG 4 cut(s) 931, 1039, 1642, 1723
Bse21I CCTNAGG 1 cut(s) 1566
Bse3DI GCAATG 3 cut(s) 93, 385, 1264
BseBI CCWGG 4 cut(s) 388, 578, 961, 1116
BseDI CCNNGG 6 cut(s) 299, 386, 576, 959, 1115, 1233
BseGI GGATG 1 cut(s) 969
BseLI CCNNNNNNNGG 7 cut(s) 282, 448, 583, 848, 1116, 1121, 1598
BseMI GCAATG 3 cut(s) 93, 385, 1264
BseMII CTCAG 6 cut(s) 123, 231, 438, 596, 924, 1557
BseNI ACTGG 4 cut(s) 931, 1039, 1642, 1723
BseRI GAGGAG 2 cut(s) 464, 1722
BseSI GKGCMC 1 cut(s) 729
BseXI GCAGC 3 cut(s) 73, 316, 745
BseYI CCCAGC 2 cut(s) 398, 544
BshFI GGCC 2 cut(s) 855, 947
BshNI GGYRCC 3 cut(s) 426, 913, 1364
BsiSI CCGG 1 cut(s) 11
BslFI GGGAC 3 cut(s) 84, 309, 942
BslI CCNNNNNNNGG 7 cut(s) 282, 448, 583, 848, 1116, 1121, 1598
BsmAI GTCTC 3 cut(s) 929, 1090, 1517
BsmBI CGTCTC 1 cut(s) 929
BsmFI GGGAC 3 cut(s) 84, 309, 942
BsmI GAATGC 1 cut(s) 250
BsnI GGCC 2 cut(s) 855, 947
Bsp1286I GDGCHC 1 cut(s) 729
Bsp143I GATC 4 cut(s) 565, 1037, 1207, 1588
Bsp1720I GCTNAGC 1 cut(s) 771
BspACI CCGC 1 cut(s) 30
BspANI GGCC 2 cut(s) 855, 947
BspCNI CTCAG 6 cut(s) 124, 232, 439, 595, 925, 1558
BspLI GGNNCC 9 cut(s) 148, 297, 385, 428, 915, 957, 958, 1366, 1590
BspMAI CTGCAG 2 cut(s) 763, 1059
BspMI ACCTGC 1 cut(s) 1657
BspPI GGATC 3 cut(s) 1045, 1583, 1596
BspT107I GGYRCC 3 cut(s) 426, 913, 1364
BsrBI CCGCTC 1 cut(s) 32
BsrDI GCAATG 3 cut(s) 93, 385, 1264
BsrI ACTGG 4 cut(s) 931, 1039, 1642, 1723
BssECI CCNNGG 6 cut(s) 299, 386, 576, 959, 1115, 1233
BssMI GATC 4 cut(s) 565, 1037, 1207, 1588
BssNI GRCGYC 1 cut(s) 427
BssSI CACGAG 1 cut(s) 1314
BssT1I CCWWGG 2 cut(s) 299, 1233
Bst2BI CACGAG 1 cut(s) 1314
Bst2UI CCWGG 4 cut(s) 388, 578, 961, 1116
Bst4CI ACNGT 4 cut(s) 19, 781, 880, 1678
Bst6I CTCTTC 1 cut(s) 1214
BstACI GRCGYC 1 cut(s) 427
BstAPI GCANNNNNTGC 1 cut(s) 767
BstDEI CTNAG 8 cut(s) 132, 240, 447, 582, 771, 933, 1377, 1566
BstENI CCTNNNNNAGG 1 cut(s) 581
BstF5I GGATG 1 cut(s) 969
BstH2I RGCGCY 1 cut(s) 430
BstHHI GCGC 1 cut(s) 429
BstKTI GATC 4 cut(s) 568, 1040, 1210, 1591
BstMAI GTCTC 3 cut(s) 929, 1090, 1517
BstMBI GATC 4 cut(s) 565, 1037, 1207, 1588
BstMWI GCNNNNNNNGC 4 cut(s) 61, 92, 758, 767
BstNI CCWGG 4 cut(s) 388, 578, 961, 1116
BstPAI GACNNNNGTC 2 cut(s) 741, 1064
BstSCI CCNGG 4 cut(s) 386, 576, 959, 1114
BstSFI CTRYAG 3 cut(s) 759, 1055, 1677
BstSLI GKGCMC 1 cut(s) 729
BstV1I GCAGC 3 cut(s) 73, 316, 745
BstV2I GAAGAC 1 cut(s) 1278
BstX2I RGATCY 2 cut(s) 1037, 1588
BstYI RGATCY 2 cut(s) 1037, 1588
Bsu36I CCTNAGG 1 cut(s) 1566
BsuRI GGCC 2 cut(s) 855, 947
BtrI CACGTC 1 cut(s) 730
BtsCI GGATG 1 cut(s) 969
BtsIMutI CAGTG 1 cut(s) 885
BveI ACCTGC 1 cut(s) 1657
CaiI CAGNNNCTG 1 cut(s) 767
CfoI GCGC 1 cut(s) 429
Cfr13I GGNCC 6 cut(s) 146, 296, 383, 477, 956, 1601
Csp6I GTAC 4 cut(s) 317, 416, 1175, 1536
CviAII CATG 6 cut(s) 201, 910, 1093, 1531, 1702, 1736
CviQI GTAC 4 cut(s) 317, 416, 1175, 1536
DdeI CTNAG 8 cut(s) 132, 240, 447, 582, 771, 933, 1377, 1566
DinI GGCGCC 1 cut(s) 428
DpnI GATC 4 cut(s) 567, 1039, 1209, 1590
DpnII GATC 4 cut(s) 565, 1037, 1207, 1588
DraI TTTAAA 1 cut(s) 1468
Eam1104I CTCTTC 1 cut(s) 1214
EarI CTCTTC 1 cut(s) 1214
Eco130I CCWWGG 2 cut(s) 299, 1233
Eco47I GGWCC 6 cut(s) 146, 296, 383, 477, 956, 1601
Eco81I CCTNAGG 1 cut(s) 1566
EcoNI CCTNNNNNAGG 1 cut(s) 581
EcoO109I RGGNCCY 2 cut(s) 296, 956
EcoRII CCWGG 4 cut(s) 386, 576, 959, 1114
EcoT14I CCWWGG 2 cut(s) 299, 1233
EgeI GGCGCC 1 cut(s) 428
EheI GGCGCC 1 cut(s) 428
ErhI CCWWGG 2 cut(s) 299, 1233
Esp3I CGTCTC 1 cut(s) 929
FaeI CATG 6 cut(s) 204, 913, 1096, 1534, 1705, 1739
FalI AAGNNNNNCTT 4 cut(s) 168, 200, 332, 364
FaqI GGGAC 3 cut(s) 84, 309, 942
FatI CATG 6 cut(s) 200, 909, 1092, 1530, 1701, 1735
FauI CCCGC 1 cut(s) 37
FbaI TGATCA 2 cut(s) 565, 1207
FblI GTMKAC 2 cut(s) 229, 803
Fnu4HI GCNGC 3 cut(s) 62, 305, 759
FokI GGATG 1 cut(s) 976
Fsp4HI GCNGC 3 cut(s) 62, 305, 759
FspBI CTAG 5 cut(s) 410, 1041, 1293, 1392, 1578
GlaI GCGC 1 cut(s) 428
GluI GCNGC 3 cut(s) 62, 305, 759
GsaI CCCAGC 2 cut(s) 402, 548
HaeII RGCGCY 1 cut(s) 430
HaeIII GGCC 2 cut(s) 855, 947
HapII CCGG 1 cut(s) 11
HhaI GCGC 1 cut(s) 429
Hin1I GRCGYC 1 cut(s) 427
Hin1II CATG 6 cut(s) 204, 913, 1096, 1534, 1705, 1739
Hin6I GCGC 1 cut(s) 427
HinP1I GCGC 1 cut(s) 427
HincII GTYRAC 2 cut(s) 22, 230
HindII GTYRAC 2 cut(s) 22, 230
HindIII AAGCTT 3 cut(s) 140, 182, 267
HinfI GANTC 4 cut(s) 764, 1003, 1073, 1630
HpaI GTTAAC 1 cut(s) 22
HpaII CCGG 1 cut(s) 11
HphI GGTGA 5 cut(s) 122, 1091, 1625, 1634, 1681
Hpy166II GTNNAC 6 cut(s) 22, 230, 804, 1536, 1601, 1612
Hpy188I TCNGA 6 cut(s) 36, 627, 847, 1189, 1330, 1696
Hpy188III TCNNGA 6 cut(s) 475, 812, 1041, 1505, 1516, 1758
Hpy8I GTNNAC 6 cut(s) 22, 230, 804, 1536, 1601, 1612
HpyAV CCTTC 2 cut(s) 523, 680
HpyCH4III ACNGT 4 cut(s) 19, 781, 880, 1678
HpyCH4IV ACGT 1 cut(s) 729
HpyCH4V TGCA 9 cut(s) 47, 61, 86, 378, 761, 1057, 1481, 1544, 1666
HpyF10VI GCNNNNNNNGC 4 cut(s) 61, 92, 758, 767
HpyF3I CTNAG 8 cut(s) 132, 240, 447, 582, 771, 933, 1377, 1566
HpySE526I ACGT 1 cut(s) 729
Hsp92I GRCGYC 1 cut(s) 427
Hsp92II CATG 6 cut(s) 204, 913, 1096, 1534, 1705, 1739
HspAI GCGC 1 cut(s) 427
KasI GGCGCC 1 cut(s) 426
KflI GGGWCCC 1 cut(s) 956
Ksp22I TGATCA 2 cut(s) 565, 1207
KspAI GTTAAC 1 cut(s) 22
Kzo9I GATC 4 cut(s) 565, 1037, 1207, 1588
LmnI GCTCC 1 cut(s) 37
Lsp1109I GCAGC 3 cut(s) 73, 316, 745
LweI GCATC 1 cut(s) 1531
MaeI CTAG 5 cut(s) 410, 1041, 1293, 1392, 1578
MaeII ACGT 1 cut(s) 729
MaeIII GTNAC 2 cut(s) 874, 1135
MalI GATC 4 cut(s) 567, 1039, 1209, 1590
MbiI CCGCTC 1 cut(s) 32
MboI GATC 4 cut(s) 565, 1037, 1207, 1588
MfeI CAATTG 1 cut(s) 709
MflI RGATCY 2 cut(s) 1037, 1588
MhlI GDGCHC 1 cut(s) 729
Mly113I GGCGCC 1 cut(s) 427
MroXI GAANNNNTTC 1 cut(s) 506
MseI TTAA 8 cut(s) 21, 272, 339, 459, 486, 783, 1467, 1713
MslI CAYNNNNRTG 1 cut(s) 1347
MspA1I CMGCKG 1 cut(s) 866
MspI CCGG 1 cut(s) 11
MspR9I CCNGG 4 cut(s) 388, 578, 961, 1116
MunI CAATTG 1 cut(s) 709
Mva1269I GAATGC 1 cut(s) 250
MvaI CCWGG 4 cut(s) 388, 578, 961, 1116
MwoI GCNNNNNNNGC 4 cut(s) 61, 92, 758, 767
NarI GGCGCC 1 cut(s) 427
NdeII GATC 4 cut(s) 565, 1037, 1207, 1588
NlaIII CATG 6 cut(s) 204, 913, 1096, 1534, 1705, 1739
NlaIV GGNNCC 9 cut(s) 148, 297, 385, 428, 915, 957, 958, 1366, 1590
NmuCI GTSAC 1 cut(s) 874
PaqCI CACCTGC 1 cut(s) 1657
PctI GAATGC 1 cut(s) 250
PdmI GAANNNNTTC 1 cut(s) 506
PfeI GAWTC 4 cut(s) 764, 1003, 1073, 1630
PflMI CCANNNNNTGG 1 cut(s) 848
PkrI GCNGC 3 cut(s) 63, 306, 760
PluTI GGCGCC 1 cut(s) 430
PpuMI RGGWCCY 2 cut(s) 296, 956
PshAI GACNNNNGTC 2 cut(s) 741, 1064
PshBI ATTAAT 2 cut(s) 459, 486
Psp5II RGGWCCY 2 cut(s) 296, 956
Psp6I CCWGG 4 cut(s) 386, 576, 959, 1114
PspFI CCCAGC 2 cut(s) 398, 544
PspGI CCWGG 4 cut(s) 386, 576, 959, 1114
PspN4I GGNNCC 9 cut(s) 148, 297, 385, 428, 915, 957, 958, 1366, 1590
PspPI GGNCC 6 cut(s) 146, 296, 383, 477, 956, 1601
PspPPI RGGWCCY 2 cut(s) 296, 956
PstI CTGCAG 2 cut(s) 763, 1059
PstNI CAGNNNCTG 1 cut(s) 767
PsuI RGATCY 2 cut(s) 1037, 1588
PvuII CAGCTG 1 cut(s) 866
RsaI GTAC 4 cut(s) 318, 417, 1176, 1537
RsaNI GTAC 4 cut(s) 317, 416, 1175, 1536
RseI CAYNNNNRTG 1 cut(s) 1347
SalI GTCGAC 1 cut(s) 228
SaqAI TTAA 8 cut(s) 21, 272, 339, 459, 486, 783, 1467, 1713
SatI GCNGC 3 cut(s) 62, 305, 759
Sau3AI GATC 4 cut(s) 565, 1037, 1207, 1588
Sau96I GGNCC 6 cut(s) 146, 296, 383, 477, 956, 1601
ScrFI CCNGG 4 cut(s) 388, 578, 961, 1116
SduI GDGCHC 1 cut(s) 729
SfaNI GCATC 1 cut(s) 1531
SfcI CTRYAG 3 cut(s) 759, 1055, 1677
SfoI GGCGCC 1 cut(s) 428
SinI GGWCC 6 cut(s) 146, 296, 383, 477, 956, 1601
SmiMI CAYNNNNRTG 1 cut(s) 1347
SmlI CTYRAG 1 cut(s) 1514
SmoI CTYRAG 1 cut(s) 1514
SsiI CCGC 1 cut(s) 30
SspDI GGCGCC 1 cut(s) 426
SspI AATATT 1 cut(s) 154
SspMI CTAG 5 cut(s) 410, 1041, 1293, 1392, 1578
StyD4I CCNGG 4 cut(s) 386, 576, 959, 1114
StyI CCWWGG 2 cut(s) 299, 1233
TaaI ACNGT 4 cut(s) 19, 781, 880, 1678
TaiI ACGT 1 cut(s) 732
TaqI TCGA 3 cut(s) 80, 229, 604
TatI WGTACW 2 cut(s) 1174, 1535
TfiI GAWTC 4 cut(s) 764, 1003, 1073, 1630
Tru1I TTAA 8 cut(s) 21, 272, 339, 459, 486, 783, 1467, 1713
Tru9I TTAA 8 cut(s) 21, 272, 339, 459, 486, 783, 1467, 1713
TscAI CASTG 1 cut(s) 885
TseFI GTSAC 1 cut(s) 874
TseI GCWGC 3 cut(s) 61, 304, 758
Tsp45I GTSAC 1 cut(s) 874
TspGWI ACGGA 3 cut(s) 735, 1024, 1430
TspRI CASTG 1 cut(s) 885
Van91I CCANNNNNTGG 1 cut(s) 848
VpaK11BI GGWCC 6 cut(s) 146, 296, 383, 477, 956, 1601
VspI ATTAAT 2 cut(s) 459, 486
XagI CCTNNNNNAGG 1 cut(s) 581
XapI RAATTY 2 cut(s) 606, 1160
XbaI TCTAGA 1 cut(s) 1040
XmiI GTMKAC 2 cut(s) 229, 803
XmnI GAANNNNTTC 1 cut(s) 506
XspI CTAG 5 cut(s) 410, 1041, 1293, 1392, 1578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.