Pentatricopeptide repeat-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FKBP_C | PF00254 | 106 - 224 | 7.2e-11 | FKBP-type peptidyl-prolyl cis-trans isomerase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 602 |
| AciI | CCGC | 2 cut(s) | 200, 372 |
| AclI | AACGTT | 1 cut(s) | 647 |
| AclWI | GGATC | 1 cut(s) | 334 |
| AcuI | CTGAAG | 1 cut(s) | 573 |
| AcyI | GRCGYC | 1 cut(s) | 194 |
| AfaI | GTAC | 2 cut(s) | 262, 542 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 190, 602 |
| AgsI | TTSAA | 6 cut(s) | 57, 135, 251, 280, 439, 690 |
| AjnI | CCWGG | 2 cut(s) | 454, 637 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 318, 350 |
| AluBI | AGCT | 5 cut(s) | 317, 515, 655, 667, 676 |
| AluI | AGCT | 5 cut(s) | 317, 515, 655, 667, 676 |
| Alw26I | GTCTC | 2 cut(s) | 201, 217 |
| AlwI | GGATC | 1 cut(s) | 334 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 317, 602 |
| AoxI | GGCC | 2 cut(s) | 213, 610 |
| ApeKI | GCWGC | 5 cut(s) | 112, 125, 169, 515, 673 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 172, 204 |
| AspLEI | GCGC | 2 cut(s) | 149, 449 |
| AspS9I | GGNCC | 2 cut(s) | 308, 611 |
| AvaII | GGWCC | 1 cut(s) | 308 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 360, 393 |
| BauI | CACGAG | 1 cut(s) | 531 |
| BbsI | GAAGAC | 2 cut(s) | 258, 427 |
| BbvI | GCAGC | 5 cut(s) | 124, 137, 156, 502, 685 |
| BccI | CCATC | 1 cut(s) | 266 |
| BceAI | ACGGC | 1 cut(s) | 187 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 525, 559 |
| BciT130I | CCWGG | 2 cut(s) | 456, 639 |
| BcoDI | GTCTC | 2 cut(s) | 201, 217 |
| BfaI | CTAG | 1 cut(s) | 78 |
| BfmI | CTRYAG | 1 cut(s) | 256 |
| BfoI | RGCGCY | 1 cut(s) | 450 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 618 |
| BisI | GCNGC | 5 cut(s) | 113, 126, 170, 516, 674 |
| BlsI | GCNGC | 5 cut(s) | 114, 127, 171, 517, 675 |
| BmcAI | AGTACT | 1 cut(s) | 262 |
| Bme1390I | CCNGG | 2 cut(s) | 456, 639 |
| Bme18I | GGWCC | 1 cut(s) | 308 |
| BmgT120I | GGNCC | 2 cut(s) | 308, 611 |
| BmiI | GGNNCC | 1 cut(s) | 309 |
| BmrFI | CCNGG | 2 cut(s) | 456, 639 |
| BmrI | ACTGGG | 1 cut(s) | 63 |
| BmsI | GCATC | 1 cut(s) | 14 |
| BmuI | ACTGGG | 1 cut(s) | 63 |
| BpiI | GAAGAC | 2 cut(s) | 258, 427 |
| BpmI | CTGGAG | 4 cut(s) | 438, 579, 660, 683 |
| BsaHI | GRCGYC | 1 cut(s) | 194 |
| BsaJI | CCNNGG | 1 cut(s) | 455 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 190, 602 |
| Bse118I | RCCGGY | 1 cut(s) | 172 |
| Bse1I | ACTGG | 3 cut(s) | 43, 69, 311 |
| Bse3DI | GCAATG | 1 cut(s) | 543 |
| BseBI | CCWGG | 2 cut(s) | 456, 639 |
| BseDI | CCNNGG | 1 cut(s) | 455 |
| BseGI | GGATG | 2 cut(s) | 240, 564 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 190, 602 |
| BseMI | GCAATG | 1 cut(s) | 543 |
| BseMII | CTCAG | 1 cut(s) | 309 |
| BseNI | ACTGG | 3 cut(s) | 43, 69, 311 |
| BseXI | GCAGC | 5 cut(s) | 124, 137, 156, 502, 685 |
| BseYI | CCCAGC | 1 cut(s) | 423 |
| BsgI | GTGCAG | 2 cut(s) | 492, 501 |
| BshFI | GGCC | 2 cut(s) | 215, 612 |
| BsiSI | CCGG | 1 cut(s) | 173 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 190, 602 |
| BsmAI | GTCTC | 2 cut(s) | 201, 217 |
| BsmBI | CGTCTC | 2 cut(s) | 201, 217 |
| BsnI | GGCC | 2 cut(s) | 215, 612 |
| Bsp143I | GATC | 2 cut(s) | 140, 326 |
| BspACI | CCGC | 2 cut(s) | 200, 372 |
| BspANI | GGCC | 2 cut(s) | 215, 612 |
| BspCNI | CTCAG | 1 cut(s) | 310 |
| BspLI | GGNNCC | 1 cut(s) | 309 |
| BspPI | GGATC | 1 cut(s) | 334 |
| BsrDI | GCAATG | 1 cut(s) | 543 |
| BsrFI | RCCGGY | 1 cut(s) | 172 |
| BsrI | ACTGG | 3 cut(s) | 43, 69, 311 |
| BssAI | RCCGGY | 1 cut(s) | 172 |
| BssECI | CCNNGG | 1 cut(s) | 455 |
| BssMI | GATC | 2 cut(s) | 140, 326 |
| BssNI | GRCGYC | 1 cut(s) | 194 |
| BssSI | CACGAG | 1 cut(s) | 531 |
| Bst2BI | CACGAG | 1 cut(s) | 531 |
| Bst2UI | CCWGG | 2 cut(s) | 456, 639 |
| Bst4CI | ACNGT | 3 cut(s) | 260, 334, 583 |
| BstACI | GRCGYC | 1 cut(s) | 194 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 515 |
| BstC8I | GCNNGC | 2 cut(s) | 23, 174 |
| BstDEI | CTNAG | 1 cut(s) | 318 |
| BstF5I | GGATG | 2 cut(s) | 240, 564 |
| BstH2I | RGCGCY | 1 cut(s) | 450 |
| BstHHI | GCGC | 2 cut(s) | 149, 449 |
| BstKTI | GATC | 2 cut(s) | 143, 329 |
| BstMAI | GTCTC | 2 cut(s) | 201, 217 |
| BstMBI | GATC | 2 cut(s) | 140, 326 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 515, 618, 673 |
| BstNI | CCWGG | 2 cut(s) | 456, 639 |
| BstSCI | CCNGG | 2 cut(s) | 454, 637 |
| BstSFI | CTRYAG | 1 cut(s) | 256 |
| BstV1I | GCAGC | 5 cut(s) | 124, 137, 156, 502, 685 |
| BstV2I | GAAGAC | 2 cut(s) | 258, 427 |
| BsuRI | GGCC | 2 cut(s) | 215, 612 |
| BtsCI | GGATG | 2 cut(s) | 240, 564 |
| BtsI | GCAGTG | 1 cut(s) | 48 |
| BtsIMutI | CAGTG | 1 cut(s) | 48 |
| Cac8I | GCNNGC | 2 cut(s) | 23, 174 |
| CaiI | CAGNNNCTG | 2 cut(s) | 317, 602 |
| CfoI | GCGC | 2 cut(s) | 149, 449 |
| Cfr10I | RCCGGY | 1 cut(s) | 172 |
| Cfr13I | GGNCC | 2 cut(s) | 308, 611 |
| CseI | GACGC | 2 cut(s) | 183, 234 |
| Csp6I | GTAC | 2 cut(s) | 261, 541 |
| CviAII | CATG | 2 cut(s) | 144, 622 |
| CviQI | GTAC | 2 cut(s) | 261, 541 |
| DdeI | CTNAG | 1 cut(s) | 318 |
| DpnI | GATC | 2 cut(s) | 142, 328 |
| DpnII | GATC | 2 cut(s) | 140, 326 |
| EciI | GGCGGA | 1 cut(s) | 189 |
| Eco47I | GGWCC | 1 cut(s) | 308 |
| Eco57I | CTGAAG | 1 cut(s) | 573 |
| EcoRII | CCWGG | 2 cut(s) | 454, 637 |
| Esp3I | CGTCTC | 2 cut(s) | 201, 217 |
| FaeI | CATG | 2 cut(s) | 147, 625 |
| FaiI | YATR | 6 cut(s) | 145, 288, 358, 430, 609, 623 |
| FatI | CATG | 2 cut(s) | 143, 621 |
| Fnu4HI | GCNGC | 5 cut(s) | 113, 126, 170, 516, 674 |
| FokI | GGATG | 2 cut(s) | 227, 571 |
| Fsp4HI | GCNGC | 5 cut(s) | 113, 126, 170, 516, 674 |
| FspBI | CTAG | 1 cut(s) | 78 |
| GlaI | GCGC | 2 cut(s) | 148, 448 |
| GluI | GCNGC | 5 cut(s) | 113, 126, 170, 516, 674 |
| GsaI | CCCAGC | 1 cut(s) | 427 |
| GsuI | CTGGAG | 4 cut(s) | 438, 579, 660, 683 |
| HaeII | RGCGCY | 1 cut(s) | 450 |
| HaeIII | GGCC | 2 cut(s) | 215, 612 |
| HapII | CCGG | 1 cut(s) | 173 |
| HgaI | GACGC | 2 cut(s) | 183, 234 |
| HhaI | GCGC | 2 cut(s) | 149, 449 |
| Hin1I | GRCGYC | 1 cut(s) | 194 |
| Hin1II | CATG | 2 cut(s) | 147, 625 |
| Hin6I | GCGC | 2 cut(s) | 147, 447 |
| HinP1I | GCGC | 2 cut(s) | 147, 447 |
| HinfI | GANTC | 3 cut(s) | 389, 631, 679 |
| HpaII | CCGG | 1 cut(s) | 173 |
| Hpy166II | GTNNAC | 3 cut(s) | 48, 343, 484 |
| Hpy188I | TCNGA | 1 cut(s) | 211 |
| Hpy188III | TCNNGA | 5 cut(s) | 135, 248, 596, 662, 690 |
| Hpy8I | GTNNAC | 3 cut(s) | 48, 343, 484 |
| Hpy99I | CGWCG | 2 cut(s) | 208, 211 |
| HpyAV | CCTTC | 3 cut(s) | 454, 548, 696 |
| HpyCH4III | ACNGT | 3 cut(s) | 260, 334, 583 |
| HpyCH4IV | ACGT | 2 cut(s) | 432, 647 |
| HpyCH4V | TGCA | 5 cut(s) | 25, 31, 509, 518, 673 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 515, 618, 673 |
| HpyF3I | CTNAG | 1 cut(s) | 318 |
| HpySE526I | ACGT | 2 cut(s) | 432, 647 |
| Hsp92I | GRCGYC | 1 cut(s) | 194 |
| Hsp92II | CATG | 2 cut(s) | 147, 625 |
| HspAI | GCGC | 2 cut(s) | 147, 447 |
| KroI | GCCGGC | 1 cut(s) | 172 |
| KroNI | GCCGGC | 1 cut(s) | 174 |
| Kzo9I | GATC | 2 cut(s) | 140, 326 |
| LmnI | GCTCC | 2 cut(s) | 641, 664 |
| Lsp1109I | GCAGC | 5 cut(s) | 124, 137, 156, 502, 685 |
| LweI | GCATC | 1 cut(s) | 14 |
| MaeI | CTAG | 1 cut(s) | 78 |
| MaeII | ACGT | 2 cut(s) | 432, 647 |
| MaeIII | GTNAC | 2 cut(s) | 71, 547 |
| MalI | GATC | 2 cut(s) | 142, 328 |
| MboI | GATC | 2 cut(s) | 140, 326 |
| MboII | GAAGA | 2 cut(s) | 263, 427 |
| MmeI | TCCRAC | 1 cut(s) | 189 |
| MnlI | CCTC | 7 cut(s) | 194, 205, 255, 292, 592, 603, 645 |
| MroNI | GCCGGC | 1 cut(s) | 172 |
| MspA1I | CMGCKG | 2 cut(s) | 374, 676 |
| MspI | CCGG | 1 cut(s) | 173 |
| MspR9I | CCNGG | 2 cut(s) | 456, 639 |
| MvaI | CCWGG | 2 cut(s) | 456, 639 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 515, 618, 673 |
| NaeI | GCCGGC | 1 cut(s) | 174 |
| NdeII | GATC | 2 cut(s) | 140, 326 |
| NgoMIV | GCCGGC | 1 cut(s) | 172 |
| NlaIII | CATG | 2 cut(s) | 147, 625 |
| NlaIV | GGNNCC | 1 cut(s) | 309 |
| PdiI | GCCGGC | 1 cut(s) | 174 |
| PfeI | GAWTC | 3 cut(s) | 389, 631, 679 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 602 |
| PfoI | TCCNGGA | 1 cut(s) | 637 |
| PkrI | GCNGC | 5 cut(s) | 114, 127, 171, 517, 675 |
| Psp1406I | AACGTT | 1 cut(s) | 647 |
| Psp6I | CCWGG | 2 cut(s) | 454, 637 |
| PspFI | CCCAGC | 1 cut(s) | 423 |
| PspGI | CCWGG | 2 cut(s) | 454, 637 |
| PspN4I | GGNNCC | 1 cut(s) | 309 |
| PspPI | GGNCC | 2 cut(s) | 308, 611 |
| PstNI | CAGNNNCTG | 2 cut(s) | 317, 602 |
| PvuII | CAGCTG | 1 cut(s) | 676 |
| RsaI | GTAC | 2 cut(s) | 262, 542 |
| RsaNI | GTAC | 2 cut(s) | 261, 541 |
| SatI | GCNGC | 5 cut(s) | 113, 126, 170, 516, 674 |
| Sau3AI | GATC | 2 cut(s) | 140, 326 |
| Sau96I | GGNCC | 2 cut(s) | 308, 611 |
| ScaI | AGTACT | 1 cut(s) | 262 |
| ScrFI | CCNGG | 2 cut(s) | 456, 639 |
| SfaNI | GCATC | 1 cut(s) | 14 |
| SfcI | CTRYAG | 1 cut(s) | 256 |
| SinI | GGWCC | 1 cut(s) | 308 |
| SsiI | CCGC | 2 cut(s) | 200, 372 |
| SspI | AATATT | 2 cut(s) | 154, 284 |
| SspMI | CTAG | 1 cut(s) | 78 |
| StyD4I | CCNGG | 2 cut(s) | 454, 637 |
| TaaI | ACNGT | 3 cut(s) | 260, 334, 583 |
| TaiI | ACGT | 2 cut(s) | 435, 650 |
| TatI | WGTACW | 2 cut(s) | 260, 540 |
| TfiI | GAWTC | 3 cut(s) | 389, 631, 679 |
| TscAI | CASTG | 1 cut(s) | 55 |
| TseI | GCWGC | 5 cut(s) | 112, 125, 169, 515, 673 |
| TspDTI | ATGAA | 3 cut(s) | 135, 575, 638 |
| TspRI | CASTG | 1 cut(s) | 55 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 602 |
| VpaK11BI | GGWCC | 1 cut(s) | 308 |
| XspI | CTAG | 1 cut(s) | 78 |
| ZrmI | AGTACT | 1 cut(s) | 262 |