AT3G59760

Belongs to the cysteine synthase cystathionine beta- synthase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
22071948 .. 22075453
3506 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G59760.2

Sequence Viewer

Length: 1302 bp
ATGGTGGCGATGATCATGGCTTCAAGGTTTAACCGGGAAGCTAAGCTCGCATCTCAAATCTTGTCTACACTTTTGGGAAACCGAAGCTGCTACACATCCATGGCCGCCACATCTTCCTCTGCTTTACTTCTTAATCCGTTGACTTCTTCTTCTTCTTCTTCTACTCTCCGTCGTTTCAGATGCTCGCCAGAGATCTCTTCTCTCTCCTTCTCCTCCGCTTCTGATTTCTCTCTAGCGATGAAGAGGCAGAGTCGGAGTTTTGCTGATGGTTCGGAACGAGATCCGTCTGTTGTGTGTGAGGCTGTTAAGCGCGAGACTGGACCTGATGGACTCAACATCGCTGACAATGTGTCTCAGCTCATTGGGAAAACTCCTATGGTGTACTTGAACAGTATAGCAAAAGGTTGTGTAGCAAATATTGCTGCCAAACTCGAGATCATGGAGCCATGTTGCAGTGTCAAGGATAGGATTGGGTACAGTATGGTTACTGATGCTGAGCAAAAAGGATTTATATCACCTGGAAAGAGTGTTCTTGTGGAACCTACAAGTGGAAACACGGGTATTGGCCTAGCATTCATCGCTGCTTCAAGGGGCTATAGACTTATCTTGACAATGCCAGCATCCATGAGTATGGAAAGAAGGGTTCTTTTAAAGGCATTTGGAGCTGAGCTTGTATTAACAGATCCTGCTAAAGGCATGACTGGAGCGGTTCAGAAGGCTGAAGAGATCTTGAAAAACACTCCTGATGCATACATGCTCCAACAGTTTGACAACCCTGCAAATCCAAAGATTCATTACGAGACTACTGGTCCTGAGATCTGGGATGATACAAAGGGCAAGGTGGATATCTTTGTTGCAGGAATTGGAACTGGTGGAACTATCACTGGTGTTGGTCGATTTATTAAAGAGAAAAATCCCAAAACGCAGGTTATTGGTGTAGAACCCACCGAAAGCGATATACTTTCTGGTGGCAAACCGGGACCTCACAAGATTCAAGGAATTGGAGCTGGATTTATACCTAAGAATTTGGATCAGAAAATTATGGATGAAGTCATAGCGATTTCAAGTGAGGAAGCTATAGAAACCGCAAAGCAACTAGCTCTTAAGGAAGGCTTGATGGTTGGTATATCATCTGGAGCTGCAGCTGCTGCTGCAATCAAGGTGGCTAAGAGACCTGAGAATGCTGGAAAACTCATAGCTGTTGTTTTCCCGAGCTTCGGGGAGAGATATCTATCGACCCCGCTGTTCCAGTCTATCCGGGAAGAGGTGGAGAAAATGCAGCCTGAGAGAGTCAGCGGTTAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

433

Amino Acids

46.11

Weight (kDa)

8.59

Isoelectric Point (pI)

41.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PALP PF00291 117 - 397 3e-74 Pyridoxal-phosphate dependent enzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0009750)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 916
AccBSI CCGCTC 1 cut(s) 707
AccI GTMKAC 1 cut(s) 65
AccII CGCG 1 cut(s) 312
AciI CCGC 6 cut(s) 105, 216, 707, 1086, 1241, 1296
AclWI GGATC 3 cut(s) 275, 677, 1038
AcoI YGGCCR 1 cut(s) 102
AcsI RAATTY 1 cut(s) 1024
AcuI CTGAAG 1 cut(s) 741
AfaI GTAC 2 cut(s) 383, 476
AfiI CCNNNNNNNGG 4 cut(s) 548, 692, 1217, 1264
AflII CTTAAG 1 cut(s) 1103
AgsI TTSAA 6 cut(s) 24, 388, 588, 733, 995, 1065
AhdI GACNNNNNGTC 2 cut(s) 349, 807
AjnI CCWGG 1 cut(s) 517
AloI GAACNNNNNNTCC 2 cut(s) 513, 545
Alw26I GTCTC 4 cut(s) 308, 357, 794, 1165
AlwI GGATC 3 cut(s) 275, 677, 1038
AlwNI CAGNNNCTG 2 cut(s) 686, 1148
Ama87I CYCGRG 2 cut(s) 431, 1210
AoxI GGCC 2 cut(s) 102, 565
ApeKI GCWGC 9 cut(s) 87, 422, 581, 1139, 1142, 1145, 1148, 1151, 1279
ApoI RAATTY 1 cut(s) 1024
AspLEI GCGC 1 cut(s) 312
AspS9I GGNCC 3 cut(s) 320, 809, 980
AsuC2I CCSGG 3 cut(s) 35, 978, 1259
AsuHPI GGTGA 1 cut(s) 507
AvaI CYCGRG 2 cut(s) 431, 1210
AvaII GGWCC 3 cut(s) 320, 809, 980
BbvI GCAGC 9 cut(s) 74, 409, 568, 1126, 1132, 1135, 1138, 1154, 1291
BccI CCATC 3 cut(s) 260, 320, 1111
BciT130I CCWGG 1 cut(s) 519
BclI TGATCA 1 cut(s) 12
BcnI CCSGG 3 cut(s) 35, 978, 1259
BcoDI GTCTC 4 cut(s) 308, 357, 794, 1165
BfaI CTAG 3 cut(s) 233, 569, 1097
BfmI CTRYAG 3 cut(s) 595, 1077, 1140
BfrI CTTAAG 1 cut(s) 1103
BfuAI ACCTGC 1 cut(s) 916
BglII AGATCT 3 cut(s) 192, 726, 816
BlpI GCTNAGC 3 cut(s) 42, 495, 666
Bme1390I CCNGG 4 cut(s) 35, 519, 978, 1259
Bme18I GGWCC 3 cut(s) 320, 809, 980
BmeRI GACNNNNNGTC 2 cut(s) 349, 807
BmeT110I CYCGRG 2 cut(s) 431, 1210
BmgT120I GGNCC 3 cut(s) 320, 809, 980
BmiI GGNNCC 3 cut(s) 444, 540, 981
BmrFI CCNGG 4 cut(s) 35, 519, 978, 1259
BmsI GCATC 5 cut(s) 59, 170, 481, 629, 736
BpmI CTGGAG 2 cut(s) 723, 1155
Bpu1102I GCTNAGC 3 cut(s) 42, 495, 666
BpuMI CCSGG 3 cut(s) 35, 978, 1259
BsaBI GATNNNNATC 2 cut(s) 511, 1231
BsaI GGTCTC 1 cut(s) 1165
BsaJI CCNNGG 1 cut(s) 99
Bsc4I CCNNNNNNNGG 4 cut(s) 548, 692, 1217, 1264
Bse1I ACTGG 6 cut(s) 322, 706, 811, 874, 889, 1249
Bse8I GATNNNNATC 2 cut(s) 511, 1231
BseBI CCWGG 1 cut(s) 519
BseDI CCNNGG 1 cut(s) 99
BseGI GGATG 4 cut(s) 95, 620, 829, 1051
BseJI GATNNNNATC 2 cut(s) 511, 1231
BseLI CCNNNNNNNGG 4 cut(s) 548, 692, 1217, 1264
BseMII CTCAG 6 cut(s) 368, 486, 657, 804, 1167, 1275
BseNI ACTGG 6 cut(s) 322, 706, 811, 874, 889, 1249
BseRI GAGGAG 1 cut(s) 202
BseXI GCAGC 9 cut(s) 74, 409, 568, 1126, 1132, 1135, 1138, 1154, 1291
Bsh1236I CGCG 1 cut(s) 312
BshFI GGCC 2 cut(s) 104, 567
BsiHKCI CYCGRG 2 cut(s) 431, 1210
BsiSI CCGG 3 cut(s) 34, 977, 1258
BslFI GGGAC 1 cut(s) 993
BslI CCNNNNNNNGG 4 cut(s) 548, 692, 1217, 1264
BsmAI GTCTC 4 cut(s) 308, 357, 794, 1165
BsmFI GGGAC 1 cut(s) 993
BsmI GAATGC 2 cut(s) 572, 1186
BsnI GGCC 2 cut(s) 104, 567
Bso31I GGTCTC 1 cut(s) 1165
BsoBI CYCGRG 2 cut(s) 431, 1210
Bsp143I GATC 8 cut(s) 12, 192, 280, 435, 682, 726, 816, 1030
Bsp1720I GCTNAGC 3 cut(s) 42, 495, 666
Bsp19I CCATGG 1 cut(s) 99
BspACI CCGC 6 cut(s) 105, 216, 707, 1086, 1241, 1296
BspANI GGCC 2 cut(s) 104, 567
BspCNI CTCAG 6 cut(s) 367, 487, 658, 805, 1168, 1276
BspFNI CGCG 1 cut(s) 312
BspLI GGNNCC 3 cut(s) 444, 540, 981
BspMAI CTGCAG 1 cut(s) 1144
BspMI ACCTGC 1 cut(s) 916
BspPI GGATC 3 cut(s) 275, 677, 1038
BspTI CTTAAG 1 cut(s) 1103
BspTNI GGTCTC 1 cut(s) 1165
BsrBI CCGCTC 1 cut(s) 707
BsrI ACTGG 6 cut(s) 322, 706, 811, 874, 889, 1249
BssECI CCNNGG 1 cut(s) 99
BssMI GATC 8 cut(s) 12, 192, 280, 435, 682, 726, 816, 1030
BssT1I CCWWGG 1 cut(s) 99
Bst2UI CCWGG 1 cut(s) 519
Bst4CI ACNGT 3 cut(s) 392, 479, 765
Bst6I CTCTTC 4 cut(s) 202, 236, 717, 1257
BstAFI CTTAAG 1 cut(s) 1103
BstAPI GCANNNNNTGC 2 cut(s) 419, 1148
BstC8I GCNNGC 3 cut(s) 48, 185, 618
BstDEI CTNAG 9 cut(s) 42, 354, 495, 666, 813, 1020, 1167, 1176, 1284
BstDSI CCRYGG 1 cut(s) 99
BstENI CCTNNNNNAGG 1 cut(s) 690
BstF5I GGATG 4 cut(s) 95, 620, 829, 1051
BstFNI CGCG 1 cut(s) 312
BstHHI GCGC 1 cut(s) 312
BstKTI GATC 8 cut(s) 15, 195, 283, 438, 685, 729, 819, 1033
BstMAI GTCTC 4 cut(s) 308, 357, 794, 1165
BstMBI GATC 8 cut(s) 12, 192, 280, 435, 682, 726, 816, 1030
BstMWI GCNNNNNNNGC 7 cut(s) 47, 419, 578, 662, 1145, 1148, 1151
BstNI CCWGG 1 cut(s) 519
BstNSI RCATGY 1 cut(s) 757
BstSCI CCNGG 4 cut(s) 33, 517, 976, 1257
BstSFI CTRYAG 3 cut(s) 595, 1077, 1140
BstUI CGCG 1 cut(s) 312
BstV1I GCAGC 9 cut(s) 74, 409, 568, 1126, 1132, 1135, 1138, 1154, 1291
BstX2I RGATCY 5 cut(s) 192, 280, 682, 726, 816
BstXI CCANNNNNNTGG 1 cut(s) 631
BstYI RGATCY 5 cut(s) 192, 280, 682, 726, 816
BsuRI GGCC 2 cut(s) 104, 567
BtgI CCRYGG 1 cut(s) 99
BtgZI GCGATG 4 cut(s) 23, 251, 322, 562
BtsCI GGATG 4 cut(s) 95, 620, 829, 1051
BtsI GCAGTG 1 cut(s) 460
BtsIMutI CAGTG 2 cut(s) 460, 882
BveI ACCTGC 1 cut(s) 916
Cac8I GCNNGC 3 cut(s) 48, 185, 618
CaiI CAGNNNCTG 2 cut(s) 686, 1148
CfoI GCGC 1 cut(s) 312
Cfr13I GGNCC 3 cut(s) 320, 809, 980
Csp6I GTAC 2 cut(s) 382, 475
CspCI CAANNNNNGTGG 2 cut(s) 1143, 1178
CviAII CATG 7 cut(s) 16, 100, 439, 447, 625, 697, 754
CviQI GTAC 2 cut(s) 382, 475
DdeI CTNAG 9 cut(s) 42, 354, 495, 666, 813, 1020, 1167, 1176, 1284
DpnI GATC 8 cut(s) 14, 194, 282, 437, 684, 728, 818, 1032
DpnII GATC 8 cut(s) 12, 192, 280, 435, 682, 726, 816, 1030
DraI TTTAAA 1 cut(s) 651
DriI GACNNNNNGTC 2 cut(s) 349, 807
EaeI YGGCCR 1 cut(s) 102
Eam1104I CTCTTC 4 cut(s) 202, 236, 717, 1257
Eam1105I GACNNNNNGTC 2 cut(s) 349, 807
EarI CTCTTC 4 cut(s) 202, 236, 717, 1257
Eco130I CCWWGG 1 cut(s) 99
Eco31I GGTCTC 1 cut(s) 1165
Eco32I GATATC 2 cut(s) 847, 1229
Eco47I GGWCC 3 cut(s) 320, 809, 980
Eco57I CTGAAG 1 cut(s) 741
Eco88I CYCGRG 2 cut(s) 431, 1210
EcoNI CCTNNNNNAGG 1 cut(s) 690
EcoO109I RGGNCCY 1 cut(s) 980
EcoRII CCWGG 1 cut(s) 517
EcoRV GATATC 2 cut(s) 847, 1229
EcoT14I CCWWGG 1 cut(s) 99
EcoT22I ATGCAT 1 cut(s) 751
ErhI CCWWGG 1 cut(s) 99
FaeI CATG 7 cut(s) 19, 103, 442, 450, 628, 700, 757
FalI AAGNNNNNCTT 2 cut(s) 1097, 1129
FaqI GGGAC 1 cut(s) 993
FatI CATG 7 cut(s) 15, 99, 438, 446, 624, 696, 753
FauI CCCGC 1 cut(s) 1248
FbaI TGATCA 1 cut(s) 12
FblI GTMKAC 1 cut(s) 65
FokI GGATG 4 cut(s) 82, 607, 836, 1058
FspBI CTAG 3 cut(s) 233, 569, 1097
GlaI GCGC 1 cut(s) 311
GsuI CTGGAG 2 cut(s) 723, 1155
HaeIII GGCC 2 cut(s) 104, 567
HapII CCGG 3 cut(s) 34, 977, 1258
HhaI GCGC 1 cut(s) 312
Hin1II CATG 7 cut(s) 19, 103, 442, 450, 628, 700, 757
Hin6I GCGC 1 cut(s) 310
HinP1I GCGC 1 cut(s) 310
HincII GTYRAC 1 cut(s) 141
HindII GTYRAC 1 cut(s) 141
HinfI GANTC 5 cut(s) 250, 330, 790, 991, 1290
HpaII CCGG 3 cut(s) 34, 977, 1258
HphI GGTGA 1 cut(s) 507
Hpy166II GTNNAC 3 cut(s) 66, 141, 382
Hpy188I TCNGA 6 cut(s) 179, 223, 255, 274, 714, 1035
Hpy188III TCNNGA 7 cut(s) 433, 607, 730, 743, 812, 1134, 1210
Hpy8I GTNNAC 3 cut(s) 66, 141, 382
Hpy99I CGWCG 1 cut(s) 174
HpyAV CCTTC 4 cut(s) 217, 633, 709, 1103
HpyCH4III ACNGT 3 cut(s) 392, 479, 765
HpyCH4V TGCA 7 cut(s) 453, 749, 779, 857, 1142, 1154, 1279
HpyF10VI GCNNNNNNNGC 7 cut(s) 47, 419, 578, 662, 1145, 1148, 1151
HpyF3I CTNAG 9 cut(s) 42, 354, 495, 666, 813, 1020, 1167, 1176, 1284
Hsp92II CATG 7 cut(s) 19, 103, 442, 450, 628, 700, 757
HspAI GCGC 1 cut(s) 310
Ksp22I TGATCA 1 cut(s) 12
Kzo9I GATC 8 cut(s) 12, 192, 280, 435, 682, 726, 816, 1030
LmnI GCTCC 6 cut(s) 442, 662, 704, 762, 1004, 1136
Lsp1109I GCAGC 9 cut(s) 74, 409, 568, 1126, 1132, 1135, 1138, 1154, 1291
LweI GCATC 5 cut(s) 59, 170, 481, 629, 736
MaeI CTAG 3 cut(s) 233, 569, 1097
MaeIII GTNAC 1 cut(s) 484
MalI GATC 8 cut(s) 14, 194, 282, 437, 684, 728, 818, 1032
MbiI CCGCTC 1 cut(s) 707
MboI GATC 8 cut(s) 12, 192, 280, 435, 682, 726, 816, 1030
MflI RGATCY 5 cut(s) 192, 280, 682, 726, 816
MluCI AATT 4 cut(s) 861, 999, 1024, 1038
MlyI GAGTC 3 cut(s) 259, 324, 1299
MmeI TCCRAC 2 cut(s) 233, 784
MnlI CCTC 7 cut(s) 127, 223, 237, 292, 993, 1063, 1258
Mph1103I ATGCAT 1 cut(s) 751
MseI TTAA 8 cut(s) 30, 132, 306, 650, 677, 903, 1104, 1300
MslI CAYNNNNRTG 2 cut(s) 98, 629
MspA1I CMGCKG 3 cut(s) 1145, 1243, 1296
MspCI CTTAAG 1 cut(s) 1103
MspI CCGG 3 cut(s) 34, 977, 1258
MspR9I CCNGG 4 cut(s) 35, 519, 978, 1259
Mva1269I GAATGC 2 cut(s) 572, 1186
MvaI CCWGG 1 cut(s) 519
MvnI CGCG 1 cut(s) 312
MwoI GCNNNNNNNGC 7 cut(s) 47, 419, 578, 662, 1145, 1148, 1151
NciI CCSGG 3 cut(s) 35, 978, 1259
NcoI CCATGG 1 cut(s) 99
NdeII GATC 8 cut(s) 12, 192, 280, 435, 682, 726, 816, 1030
NlaIII CATG 7 cut(s) 19, 103, 442, 450, 628, 700, 757
NlaIV GGNNCC 3 cut(s) 444, 540, 981
NsiI ATGCAT 1 cut(s) 751
NspI RCATGY 1 cut(s) 757
PaeR7I CTCGAG 1 cut(s) 431
PctI GAATGC 2 cut(s) 572, 1186
PfeI GAWTC 2 cut(s) 790, 991
PfoI TCCNGGA 1 cut(s) 1257
PleI GAGTC 3 cut(s) 258, 324, 1298
PpsI GAGTC 3 cut(s) 258, 324, 1298
PpuMI RGGWCCY 1 cut(s) 980
Psp5II RGGWCCY 1 cut(s) 980
Psp6I CCWGG 1 cut(s) 517
PspGI CCWGG 1 cut(s) 517
PspN4I GGNNCC 3 cut(s) 444, 540, 981
PspPI GGNCC 3 cut(s) 320, 809, 980
PspPPI RGGWCCY 1 cut(s) 980
PstI CTGCAG 1 cut(s) 1144
PstNI CAGNNNCTG 2 cut(s) 686, 1148
PsuI RGATCY 5 cut(s) 192, 280, 682, 726, 816
PvuII CAGCTG 1 cut(s) 1145
RsaI GTAC 2 cut(s) 383, 476
RsaNI GTAC 2 cut(s) 382, 475
RseI CAYNNNNRTG 2 cut(s) 98, 629
SaqAI TTAA 8 cut(s) 30, 132, 306, 650, 677, 903, 1104, 1300
Sau3AI GATC 8 cut(s) 12, 192, 280, 435, 682, 726, 816, 1030
Sau96I GGNCC 3 cut(s) 320, 809, 980
SchI GAGTC 3 cut(s) 259, 324, 1299
ScrFI CCNGG 4 cut(s) 35, 519, 978, 1259
SfaNI GCATC 5 cut(s) 59, 170, 481, 629, 736
SfcI CTRYAG 3 cut(s) 595, 1077, 1140
Sfr274I CTCGAG 1 cut(s) 431
SinI GGWCC 3 cut(s) 320, 809, 980
SlaI CTCGAG 1 cut(s) 431
SmiMI CAYNNNNRTG 2 cut(s) 98, 629
SmlI CTYRAG 2 cut(s) 431, 1103
SmoI CTYRAG 2 cut(s) 431, 1103
Sse9I AATT 4 cut(s) 861, 999, 1024, 1038
SsiI CCGC 6 cut(s) 105, 216, 707, 1086, 1241, 1296
SspI AATATT 1 cut(s) 418
SspMI CTAG 3 cut(s) 233, 569, 1097
StyD4I CCNGG 4 cut(s) 33, 517, 976, 1257
StyI CCWWGG 1 cut(s) 99
TaaI ACNGT 3 cut(s) 392, 479, 765
TaqI TCGA 3 cut(s) 432, 895, 1235
TasI AATT 4 cut(s) 861, 999, 1024, 1038
TatI WGTACW 1 cut(s) 381
TauI GCSGC 1 cut(s) 107
TfiI GAWTC 2 cut(s) 790, 991
Tru1I TTAA 8 cut(s) 30, 132, 306, 650, 677, 903, 1104, 1300
Tru9I TTAA 8 cut(s) 30, 132, 306, 650, 677, 903, 1104, 1300
TscAI CASTG 2 cut(s) 460, 889
TseI GCWGC 9 cut(s) 87, 422, 581, 1139, 1142, 1145, 1148, 1151, 1279
TspDTI ATGAA 4 cut(s) 254, 565, 782, 1062
TspGWI ACGGA 3 cut(s) 126, 158, 273
TspRI CASTG 2 cut(s) 460, 889
Vha464I CTTAAG 1 cut(s) 1103
VpaK11BI GGWCC 3 cut(s) 320, 809, 980
XagI CCTNNNNNAGG 1 cut(s) 690
XapI RAATTY 1 cut(s) 1024
XceI RCATGY 1 cut(s) 757
XhoI CTCGAG 1 cut(s) 431
XmiI GTMKAC 1 cut(s) 65
XspI CTAG 3 cut(s) 233, 569, 1097
Zsp2I ATGCAT 1 cut(s) 751
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.