Rorug04G0062000

Belongs to the cysteine synthase cystathionine beta- synthase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
9707298 .. 9717972
10675 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0062000.1

Sequence Viewer

Length: 2580 bp
ATGGCGGCTTCTCTCCACACCCACCACTACCATCTTCATCTCCGCCGCTCTACCGCCTCCAAACTCCACACCCATCAAGCCCCCATATTCTCACGGCGCTTCCCGACCGGAAAACAAAGGGCTCTTACTCGTAGACAGAACCGCAAGGGTGGTAGAGATGGAACAACTGACTCATTCTGCTGGGTGTGCAGAGCTGGTTTGGAGATTGATAAGGTCTCGCCTGATGATGAACGAAGTGAAAGGCCTCCTTTCGATATCAATTTGGCCGTCATTCTCGCCGGTTTTGCATTCGAGGCCTATTCTAGCCCACCTGCTAATGTTGGAAGGCGTGAAATTGATGCTGCAGATTGTAAGACAGTGTACCTTTCAGAGTCATTTGTGCGTGAGATATACGATGGCCAACTATCTGTGAAATTGAAAAAAGGCGTCAATCTTCCTGCCATGGATCCATGGGGAACAAGTGATCCATATGTGATCATGCAATTAGATGGTCAAGTTAATAAAAGCAAGATTAAATGGGGGACAAAAGAACCAACTTGGAACGAGGACTTCAATTTTAATATCAAGCAGCCTCCAACCAAAAATCTTCAGGTTGCTGCTTGGGATGCAAACCTTGTAACTCCACATAAGCGCATGGGGAATGCAGGCATCAATCTAGAATGCCTTTGTGATGGGAATTTGCATGAAATACTGGTGGAATTGGAAGGTATGGGAGGTGGTGGGAAATTACTTATAGAGGTCAGATATGAAACTTTTGAAGAAATTGATGAGGGGAAAAAGTGGTGGATGAGGGTCCCCATTGTTTCTGAATTTCTCCGTAATAAGGGTTTTGAACCTGCTCTGAAAAAGTTTGTTGGCTCTGACACTGTGCAAGCACGTCAGTTTGCAGAATATGCTTTTGGGCAGTTAAAGTCATTCAATAATAATGCTTACCTTTGGAAGAATCTGATTTCAAGTAATGATGAAAGTGATAGGAAGGGCCCTGGGAAACCTAATAATTCTGCTGTTGTGTCAGGCGTGCCTTCCCAGATGGAGGGTATTGCAGAGGGTTCTTTAGATAATGCAGACTGCAATGAAGTGAGCAATTTAGAGGAGTCTAACAGAGATAATGGTGGTGTGGAGAATGGAAATGCCTCTCAGCCAGTGAAAAAACTCGATGATGAAATGCAGTCAGATAAGAACTTTTGGAAGAACTTTGCTAATGAGATCAATCAAAATGTTGTAGAGAAATTTGGATTGCCAGTGCCAGGAAAATTAAAGTGGGATGGGTTTGATTTATTAGACAGAGTTGGTTTGCAGTCACAAAAGATAGCAGAAGCAACTTATGTTGAATCAGGGCTTGCAACTCCAGAAGTGTTAGATGTTGATAACGATAAAACAACAGCCCCACTTCCCATTAGCATTATGCAGTCTTCATTTCCAGATATAAAGGAAGCAACAAGGGAACTATTAAAGCAAACCGATTCTGTTTTAGGAATATTAATGGTTCTAACTGCAACAGTATCTCAAGCAAAGAAGGAAGAAAATATTGTAGGAGGGAGTGCAACTAAGGAAGAGGATGATGTCGTAACTGAGAAGCTTGCTAACTCACAGGGAGCTGAGGAGATGAAAGCACTGTTCTCAACTGCAGAAACTGCCATGGAGGCTTGGGCGATGCTCGCTACTTCTTTAGGACATCCAAGTTTTATAAAGTCTGAATTTGAGAAACTATGTTTCTTAGATAATGAGACGACAGACACACAGGTTGCAATTTGGCGTGATTCTGCACGGAAAAGATTAGTGATCGCTTTCAGGGGAACAGAGCAGGCAAGATGGAAGGACTTGCGAACGGATTTGATGCTAGCTCCTGCTGGGCTGAATCCAGAAAGGATAGGAGGAGACTTTAAGCAAGAAATTCAAGTTCATAGTGGCTTCTTAGGTGCATATGATTCTGTCAGAATAAGGATCATCTCTCTAATTAAATTGGCAATCGGTTATATTGATGATCTTGCTGAGCCGCTGCACAGATGGCATGTTTATGTAACTGGTCATAGTCTTGGTGGTGCATTAGCTACTCTCCTAGCTCTCGAACTTGCATCAAGTCAATTAGCAAAGCATGGAGTGATCAGTATAAGCATGTATAATTTTGGATCTCCTAGGGTTGGGAACAAAAGATTTGCTGATGTTTATAATGAGAAAGTCAAAGATAGTTGGAGAGTTGTAAATCACAGAGACATTATACCAACTGTTCCCCGCTTGATGGGTTACTGCCATGTAGCTCAACCTGTTTATCTAGCAACAAGAGACCTAACAAATGCCTTGGAAAATATGGAGCTCTCTGGAGATGGTTACCAAGCTGATATGATCGGGGAGTCCACACCCGATGTTCTCGTCAGTGAATTCATGAAGGGTGAGAAGGAACTTATACAGAAAATTTTACAGACTGAAATAAATATATTCCGTTCAATCAGAGATGGAACTGCACTTATGCAACATATGGAAGATTTTTACTACATCACGTTGCTAGAGAATGTGAGATCAAATTACCAACCTGTTGCCAAGTCGTTATCCGACGAACAAGAAAACAAAACAATCAGCTGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

859

Amino Acids

95.94

Weight (kDa)

5.53

Isoelectric Point (pI)

41.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 133 - 228 1.3e-19 C2 domain
Lipase_3 PF01764 594 - 745 3.7e-28 Lipase (class 3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1688, 2169
AarI CACCTGC 1 cut(s) 319
Acc36I ACCTGC 2 cut(s) 319, 844
AccBSI CCGCTC 1 cut(s) 48
AccI GTMKAC 1 cut(s) 133
AciI CCGC 7 cut(s) 5, 43, 46, 54, 142, 1997, 2233
AclWI GGATC 5 cut(s) 440, 453, 458, 1952, 2137
AcoI YGGCCR 2 cut(s) 264, 397
AcsI RAATTY 7 cut(s) 676, 809, 1229, 1697, 1893, 2378, 2412
AcuI CTGAAG 1 cut(s) 572
AcyI GRCGYC 1 cut(s) 426
AfaI GTAC 1 cut(s) 362
AfiI CCNNNNNNNGG 5 cut(s) 823, 1033, 1247, 2141, 2239
AgsI TTSAA 9 cut(s) 418, 553, 758, 833, 919, 954, 1331, 1898, 2445
AjiI CACGTC 1 cut(s) 878
AjnI CCWGG 2 cut(s) 982, 1246
AjuI GAANNNNNNNTTGG 2 cut(s) 882, 914
AloI GAACNNNNNNTCC 2 cut(s) 448, 480
Alw21I GWGCWC 1 cut(s) 2316
Alw26I GTCTC 5 cut(s) 220, 1721, 1872, 2205, 2277
AlwI GGATC 5 cut(s) 440, 453, 458, 1952, 2137
AlwNI CAGNNNCTG 1 cut(s) 1634
AoxI GGCC 5 cut(s) 242, 264, 294, 397, 979
ApaI GGGCCC 1 cut(s) 983
ApeKI GCWGC 4 cut(s) 341, 568, 596, 1999
ApoI RAATTY 7 cut(s) 676, 809, 1229, 1697, 1893, 2378, 2412
AseI ATTAAT 1 cut(s) 1481
AspA2I CCTAGG 1 cut(s) 2135
AspLEI GCGC 2 cut(s) 99, 633
AspS9I GGNCC 3 cut(s) 793, 979, 980
AsuHPI GGTGA 1 cut(s) 2402
AsuNHI GCTAGC 1 cut(s) 1840
AvaII GGWCC 1 cut(s) 793
AvrII CCTAGG 1 cut(s) 2135
BaeGI GKGCMC 1 cut(s) 983
BalI TGGCCA 1 cut(s) 399
BamHI GGATCC 1 cut(s) 445
BanII GRGCYC 3 cut(s) 124, 983, 2316
BbsI GAAGAC 1 cut(s) 1404
Bbv12I GWGCWC 1 cut(s) 2316
BbvCI CCTCAGC 1 cut(s) 1599
BbvI GCAGC 4 cut(s) 328, 580, 583, 1986
BceAI ACGGC 2 cut(s) 110, 251
BciT130I CCWGG 2 cut(s) 984, 1248
BclI TGATCA 2 cut(s) 474, 2103
BcoDI GTCTC 5 cut(s) 220, 1721, 1872, 2205, 2277
BfaI CTAG 7 cut(s) 303, 656, 1841, 2060, 2136, 2273, 2504
BfmI CTRYAG 2 cut(s) 342, 1626
BfoI RGCGCY 1 cut(s) 100
BfuAI ACCTGC 2 cut(s) 319, 844
BglI GCCNNNNNGGC 1 cut(s) 1643
BisI GCNGC 7 cut(s) 6, 46, 342, 569, 597, 1997, 2000
BlnI CCTAGG 1 cut(s) 2135
BlpI GCTNAGC 1 cut(s) 1992
BlsI GCNGC 7 cut(s) 7, 47, 343, 570, 598, 1998, 2001
Bme1390I CCNGG 2 cut(s) 984, 1248
Bme18I GGWCC 1 cut(s) 793
BmgBI CACGTC 1 cut(s) 878
BmgT120I GGNCC 3 cut(s) 793, 979, 980
BmiI GGNNCC 4 cut(s) 447, 794, 795, 981
BmrFI CCNGG 2 cut(s) 984, 1248
BmsI GCATC 6 cut(s) 328, 595, 657, 1644, 1827, 2084
BmtI GCTAGC 1 cut(s) 1844
BpiI GAAGAC 1 cut(s) 1404
BpmI CTGGAG 2 cut(s) 1332, 2340
Bpu10I CCTNAGC 1 cut(s) 1599
Bpu1102I GCTNAGC 1 cut(s) 1992
BpuEI CTTGAG 1 cut(s) 1491
BsaHI GRCGYC 1 cut(s) 426
BsaI GGTCTC 2 cut(s) 220, 2277
BsaJI CCNNGG 7 cut(s) 441, 449, 982, 983, 1638, 2135, 2298
BsaWI WCCGGW 1 cut(s) 107
Bsc4I CCNNNNNNNGG 5 cut(s) 823, 1033, 1247, 2141, 2239
Bse118I RCCGGY 1 cut(s) 278
Bse1I ACTGG 4 cut(s) 696, 1142, 1241, 2029
Bse3DI GCAATG 1 cut(s) 1078
BseBI CCWGG 2 cut(s) 984, 1248
BseDI CCNNGG 7 cut(s) 441, 449, 982, 983, 1638, 2135, 2298
BseGI GGATG 5 cut(s) 610, 792, 1270, 1564, 1675
BseLI CCNNNNNNNGG 5 cut(s) 823, 1033, 1247, 2141, 2239
BseMI GCAATG 1 cut(s) 1078
BseMII CTCAG 4 cut(s) 1151, 1563, 1590, 1983
BseNI ACTGG 4 cut(s) 696, 1142, 1241, 2029
BseRI GAGGAG 3 cut(s) 1106, 1616, 1890
BseSI GKGCMC 1 cut(s) 983
BseXI GCAGC 4 cut(s) 328, 580, 583, 1986
BseYI CCCAGC 2 cut(s) 180, 1850
BsgI GTGCAG 4 cut(s) 208, 1749, 1985, 2445
Bsh1285I CGRYCG 1 cut(s) 108
BshFI GGCC 5 cut(s) 244, 266, 296, 399, 981
BsiEI CGRYCG 1 cut(s) 108
BsiHKAI GWGCWC 1 cut(s) 2316
BsiSI CCGG 2 cut(s) 108, 279
BslFI GGGAC 2 cut(s) 535, 779
BslI CCNNNNNNNGG 5 cut(s) 823, 1033, 1247, 2141, 2239
BsmAI GTCTC 5 cut(s) 220, 1721, 1872, 2205, 2277
BsmBI CGTCTC 1 cut(s) 1721
BsmFI GGGAC 2 cut(s) 535, 779
BsmI GAATGC 3 cut(s) 287, 646, 665
BsnI GGCC 5 cut(s) 244, 266, 296, 399, 981
Bso31I GGTCTC 2 cut(s) 220, 2277
Bsp120I GGGCCC 1 cut(s) 979
Bsp1286I GDGCHC 3 cut(s) 124, 983, 2316
Bsp1720I GCTNAGC 1 cut(s) 1992
Bsp19I CCATGG 3 cut(s) 441, 449, 1638
BspACI CCGC 7 cut(s) 5, 43, 46, 54, 142, 1997, 2233
BspANI GGCC 5 cut(s) 244, 266, 296, 399, 981
BspCNI CTCAG 4 cut(s) 1150, 1564, 1591, 1984
BspHI TCATGA 1 cut(s) 2382
BspLI GGNNCC 4 cut(s) 447, 794, 795, 981
BspMAI CTGCAG 2 cut(s) 346, 1630
BspMI ACCTGC 2 cut(s) 319, 844
BspOI GCTAGC 1 cut(s) 1844
BspPI GGATC 5 cut(s) 440, 453, 458, 1952, 2137
BspTNI GGTCTC 2 cut(s) 220, 2277
BsrBI CCGCTC 1 cut(s) 48
BsrDI GCAATG 1 cut(s) 1078
BsrFI RCCGGY 1 cut(s) 278
BsrI ACTGG 4 cut(s) 696, 1142, 1241, 2029
BssAI RCCGGY 1 cut(s) 278
BssECI CCNNGG 7 cut(s) 441, 449, 982, 983, 1638, 2135, 2298
BssNI GRCGYC 1 cut(s) 426
BssT1I CCWWGG 5 cut(s) 441, 449, 1638, 2135, 2298
Bst2UI CCWGG 2 cut(s) 984, 1248
Bst4CI ACNGT 5 cut(s) 358, 868, 1501, 1617, 2227
Bst6I CTCTTC 1 cut(s) 1548
BstACI GRCGYC 1 cut(s) 426
BstAPI GCANNNNNTGC 2 cut(s) 893, 1634
BstC8I GCNNGC 8 cut(s) 646, 873, 1019, 1341, 1581, 1659, 1806, 1842
BstDEI CTNAG 7 cut(s) 1137, 1548, 1572, 1599, 1717, 1915, 1992
BstDSI CCRYGG 3 cut(s) 441, 449, 1638
BstEII GGTNACC 1 cut(s) 2327
BstF5I GGATG 5 cut(s) 610, 792, 1270, 1564, 1675
BstH2I RGCGCY 1 cut(s) 100
BstHHI GCGC 2 cut(s) 99, 633
BstMAI GTCTC 5 cut(s) 220, 1721, 1872, 2205, 2277
BstMCI CGRYCG 1 cut(s) 108
BstMWI GCNNNNNNNGC 9 cut(s) 186, 284, 293, 605, 893, 1634, 1643, 1658, 2008
BstNI CCWGG 2 cut(s) 984, 1248
BstNSI RCATGY 2 cut(s) 2015, 2119
BstPI GGTNACC 1 cut(s) 2327
BstSCI CCNGG 2 cut(s) 982, 1246
BstSFI CTRYAG 2 cut(s) 342, 1626
BstSLI GKGCMC 1 cut(s) 983
BstV1I GCAGC 4 cut(s) 328, 580, 583, 1986
BstV2I GAAGAC 1 cut(s) 1404
BstX2I RGATCY 2 cut(s) 445, 2129
BstYI RGATCY 2 cut(s) 445, 2129
BsuRI GGCC 5 cut(s) 244, 266, 296, 399, 981
BtgI CCRYGG 3 cut(s) 441, 449, 1638
BtgZI GCGATG 1 cut(s) 1667
BtrI CACGTC 1 cut(s) 878
BtsCI GGATG 5 cut(s) 610, 792, 1270, 1564, 1675
BtsIMutI CAGTG 6 cut(s) 363, 864, 1149, 1248, 1613, 2380
BveI ACCTGC 2 cut(s) 319, 844
Cac8I GCNNGC 8 cut(s) 646, 873, 1019, 1341, 1581, 1659, 1806, 1842
CaiI CAGNNNCTG 1 cut(s) 1634
CciI TCATGA 1 cut(s) 2382
CfoI GCGC 2 cut(s) 99, 633
Cfr10I RCCGGY 1 cut(s) 278
Cfr13I GGNCC 3 cut(s) 793, 979, 980
CseI GACGC 1 cut(s) 415
Csp6I GTAC 1 cut(s) 361
CviQI GTAC 1 cut(s) 361
DdeI CTNAG 7 cut(s) 1137, 1548, 1572, 1599, 1717, 1915, 1992
EaeI YGGCCR 2 cut(s) 264, 397
Eam1104I CTCTTC 1 cut(s) 1548
EarI CTCTTC 1 cut(s) 1548
EciI GGCGGA 1 cut(s) 32
Ecl136II GAGCTC 1 cut(s) 2314
Eco130I CCWWGG 5 cut(s) 441, 449, 1638, 2135, 2298
Eco147I AGGCCT 2 cut(s) 244, 296
Eco24I GRGCYC 3 cut(s) 124, 983, 2316
Eco31I GGTCTC 2 cut(s) 220, 2277
Eco32I GATATC 1 cut(s) 256
Eco47I GGWCC 1 cut(s) 793
Eco53kI GAGCTC 1 cut(s) 2314
Eco57I CTGAAG 1 cut(s) 572
Eco91I GGTNACC 1 cut(s) 2327
EcoICRI GAGCTC 1 cut(s) 2314
EcoO109I RGGNCCY 3 cut(s) 793, 979, 980
EcoO65I GGTNACC 1 cut(s) 2327
EcoRI GAATTC 1 cut(s) 2378
EcoRII CCWGG 2 cut(s) 982, 1246
EcoRV GATATC 1 cut(s) 256
EcoT14I CCWWGG 5 cut(s) 441, 449, 1638, 2135, 2298
EcoT38I GRGCYC 3 cut(s) 124, 983, 2316
ErhI CCWWGG 5 cut(s) 441, 449, 1638, 2135, 2298
Esp3I CGTCTC 1 cut(s) 1721
FalI AAGNNNNNCTT 2 cut(s) 232, 264
FaqI GGGAC 2 cut(s) 535, 779
FauI CCCGC 1 cut(s) 2240
FauNDI CATATG 3 cut(s) 469, 1924, 2475
FbaI TGATCA 2 cut(s) 474, 2103
FblI GTMKAC 1 cut(s) 133
Fnu4HI GCNGC 7 cut(s) 6, 46, 342, 569, 597, 1997, 2000
FokI GGATG 5 cut(s) 617, 799, 1277, 1571, 1662
FriOI GRGCYC 3 cut(s) 124, 983, 2316
Fsp4HI GCNGC 7 cut(s) 6, 46, 342, 569, 597, 1997, 2000
FspBI CTAG 7 cut(s) 303, 656, 1841, 2060, 2136, 2273, 2504
GlaI GCGC 2 cut(s) 98, 632
GluI GCNGC 7 cut(s) 6, 46, 342, 569, 597, 1997, 2000
GsaI CCCAGC 2 cut(s) 184, 1854
GsuI CTGGAG 2 cut(s) 1332, 2340
HaeII RGCGCY 1 cut(s) 100
HaeIII GGCC 5 cut(s) 244, 266, 296, 399, 981
HapII CCGG 2 cut(s) 108, 279
HgaI GACGC 1 cut(s) 415
HhaI GCGC 2 cut(s) 99, 633
Hin1I GRCGYC 1 cut(s) 426
Hin6I GCGC 2 cut(s) 97, 631
HinP1I GCGC 2 cut(s) 97, 631
HindIII AAGCTT 1 cut(s) 1577
HpaII CCGG 2 cut(s) 108, 279
HphI GGTGA 1 cut(s) 2402
Hpy166II GTNNAC 3 cut(s) 134, 361, 2355
Hpy188III TCNNGA 8 cut(s) 103, 656, 1349, 1421, 1862, 2066, 2319, 2383
Hpy8I GTNNAC 3 cut(s) 134, 361, 2355
Hpy99I CGWCG 1 cut(s) 2555
HpyAV CCTTC 8 cut(s) 318, 698, 970, 1032, 1510, 1810, 2380, 2389
HpyCH4III ACNGT 5 cut(s) 358, 868, 1501, 1617, 2227
HpyCH4IV ACGT 2 cut(s) 877, 2498
HpyF10VI GCNNNNNNNGC 9 cut(s) 186, 284, 293, 605, 893, 1634, 1643, 1658, 2008
HpyF3I CTNAG 7 cut(s) 1137, 1548, 1572, 1599, 1717, 1915, 1992
HpySE526I ACGT 2 cut(s) 877, 2498
Hsp92I GRCGYC 1 cut(s) 426
HspAI GCGC 2 cut(s) 97, 631
KflI GGGWCCC 1 cut(s) 793
Ksp22I TGATCA 2 cut(s) 474, 2103
LmnI GCTCC 3 cut(s) 1595, 1849, 2311
Lsp1109I GCAGC 4 cut(s) 328, 580, 583, 1986
LweI GCATC 6 cut(s) 328, 595, 657, 1644, 1827, 2084
MaeI CTAG 7 cut(s) 303, 656, 1841, 2060, 2136, 2273, 2504
MaeII ACGT 2 cut(s) 877, 2498
MaeIII GTNAC 6 cut(s) 616, 1299, 1567, 2020, 2243, 2327
MbiI CCGCTC 1 cut(s) 48
MflI RGATCY 2 cut(s) 445, 2129
MhlI GDGCHC 3 cut(s) 124, 983, 2316
MlsI TGGCCA 1 cut(s) 399
MluNI TGGCCA 1 cut(s) 399
MlyI GAGTC 4 cut(s) 164, 380, 1103, 2360
MmeI TCCRAC 4 cut(s) 301, 599, 2171, 2574
Mox20I TGGCCA 1 cut(s) 399
MscI TGGCCA 1 cut(s) 399
MseI TTAA 9 cut(s) 498, 513, 558, 908, 1256, 1451, 1481, 1884, 1959
MslI CAYNNNNRTG 1 cut(s) 2016
Msp20I TGGCCA 1 cut(s) 399
MspA1I CMGCKG 2 cut(s) 1999, 2577
MspI CCGG 2 cut(s) 108, 279
MspR9I CCNGG 2 cut(s) 984, 1248
Mva1269I GAATGC 3 cut(s) 287, 646, 665
MvaI CCWGG 2 cut(s) 984, 1248
MwoI GCNNNNNNNGC 9 cut(s) 186, 284, 293, 605, 893, 1634, 1643, 1658, 2008
NcoI CCATGG 3 cut(s) 441, 449, 1638
NdeI CATATG 3 cut(s) 469, 1924, 2475
NheI GCTAGC 1 cut(s) 1840
NlaIV GGNNCC 4 cut(s) 447, 794, 795, 981
NmuCI GTSAC 1 cut(s) 1299
NspI RCATGY 2 cut(s) 2015, 2119
PagI TCATGA 1 cut(s) 2382
PaqCI CACCTGC 1 cut(s) 319
PasI CCCWGGG 1 cut(s) 983
PceI AGGCCT 2 cut(s) 244, 296
PctI GAATGC 3 cut(s) 287, 646, 665
PfeI GAWTC 6 cut(s) 943, 1331, 1463, 1760, 1858, 1928
PkrI GCNGC 7 cut(s) 7, 47, 343, 570, 598, 1998, 2001
PleI GAGTC 4 cut(s) 164, 379, 1102, 2359
PpsI GAGTC 4 cut(s) 164, 379, 1102, 2359
PpuMI RGGWCCY 1 cut(s) 793
PshBI ATTAAT 1 cut(s) 1481
PsiI TTATAA 2 cut(s) 1688, 2169
Psp124BI GAGCTC 1 cut(s) 2316
Psp5II RGGWCCY 1 cut(s) 793
Psp6I CCWGG 2 cut(s) 982, 1246
PspEI GGTNACC 1 cut(s) 2327
PspFI CCCAGC 2 cut(s) 180, 1850
PspGI CCWGG 2 cut(s) 982, 1246
PspN4I GGNNCC 4 cut(s) 447, 794, 795, 981
PspOMI GGGCCC 1 cut(s) 979
PspPI GGNCC 3 cut(s) 793, 979, 980
PspPPI RGGWCCY 1 cut(s) 793
PstI CTGCAG 2 cut(s) 346, 1630
PstNI CAGNNNCTG 1 cut(s) 1634
PsuI RGATCY 2 cut(s) 445, 2129
PvuII CAGCTG 1 cut(s) 2577
RsaI GTAC 1 cut(s) 362
RsaNI GTAC 1 cut(s) 361
RseI CAYNNNNRTG 1 cut(s) 2016
SacI GAGCTC 1 cut(s) 2316
SaqAI TTAA 9 cut(s) 498, 513, 558, 908, 1256, 1451, 1481, 1884, 1959
SatI GCNGC 7 cut(s) 6, 46, 342, 569, 597, 1997, 2000
Sau96I GGNCC 3 cut(s) 793, 979, 980
SchI GAGTC 4 cut(s) 164, 380, 1103, 2360
ScrFI CCNGG 2 cut(s) 984, 1248
SduI GDGCHC 3 cut(s) 124, 983, 2316
SfaNI GCATC 6 cut(s) 328, 595, 657, 1644, 1827, 2084
SfcI CTRYAG 2 cut(s) 342, 1626
SinI GGWCC 1 cut(s) 793
SmiMI CAYNNNNRTG 1 cut(s) 2016
SmlI CTYRAG 1 cut(s) 1506
SmoI CTYRAG 1 cut(s) 1506
SseBI AGGCCT 2 cut(s) 244, 296
SsiI CCGC 7 cut(s) 5, 43, 46, 54, 142, 1997, 2233
SspI AATATT 2 cut(s) 1479, 1528
SspMI CTAG 7 cut(s) 303, 656, 1841, 2060, 2136, 2273, 2504
SstI GAGCTC 1 cut(s) 2316
StuI AGGCCT 2 cut(s) 244, 296
StyD4I CCNGG 2 cut(s) 982, 1246
StyI CCWWGG 5 cut(s) 441, 449, 1638, 2135, 2298
TaaI ACNGT 5 cut(s) 358, 868, 1501, 1617, 2227
TaiI ACGT 2 cut(s) 880, 2501
TaqI TCGA 4 cut(s) 252, 291, 1155, 2067
TauI GCSGC 3 cut(s) 8, 48, 1999
TfiI GAWTC 6 cut(s) 943, 1331, 1463, 1760, 1858, 1928
Tru1I TTAA 9 cut(s) 498, 513, 558, 908, 1256, 1451, 1481, 1884, 1959
Tru9I TTAA 9 cut(s) 498, 513, 558, 908, 1256, 1451, 1481, 1884, 1959
TscAI CASTG 6 cut(s) 363, 871, 1149, 1248, 1620, 2380
TseFI GTSAC 1 cut(s) 1299
TseI GCWGC 4 cut(s) 341, 568, 596, 1999
Tsp45I GTSAC 1 cut(s) 1299
TspGWI ACGGA 4 cut(s) 806, 1783, 1844, 2429
TspRI CASTG 6 cut(s) 363, 871, 1149, 1248, 1620, 2380
VpaK11BI GGWCC 1 cut(s) 793
VspI ATTAAT 1 cut(s) 1481
XapI RAATTY 7 cut(s) 676, 809, 1229, 1697, 1893, 2378, 2412
XbaI TCTAGA 1 cut(s) 655
XceI RCATGY 2 cut(s) 2015, 2119
XmaJI CCTAGG 1 cut(s) 2135
XmiI GTMKAC 1 cut(s) 133
XspI CTAG 7 cut(s) 303, 656, 1841, 2060, 2136, 2273, 2504
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.