Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001983

Physical Location & Seq

Genomic Coordinates Forward (+)

7919077 .. 7921893

Gene Structure 2817 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G22430.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1167 bp

ATGGACAAGACATTTTTCTCTAGCAACGAAGGGAAACCAATTACATGCAAAGCAGCAATATGTAGAAAAGCAGGAGAAGCATTGGTGATTGAAGACATCCACGTGGATCCACCCCAAGCTTATGAAGTTAGGATTAAGATTTTATGTACTTCTCTATGTCACACTGATCTTACTTTCTGGAAACTAAGCTTTGGACCAATTTCAAGGTTTCCTAGGATTCTTGGACACGAAGCAGTCGGTGTGGTCGAGAGCATTGGTGAAAACGTGGACGGATTTAAACAAGGTGACGTCGTTTTGCCAGTTTTTCATCCTTATTGTGAAGAATGCAAAGACTGCAAATCTTCAAAAACCAACTGGTGTGACAGATATGCCGAAGATTTCATATCAAACACAAGACGATATGGAATGGCTTCAAGATTCAAAGATTCTTCAGGAGAAGTGATTCATCATTTTCTCTTTGTCTCAAGTTTTTCCGAATACACCGTCGTGGATATTGCACATCTTGTCAAAATATCTCCTGAAATCCCCGTTGATAAAGCGGCTTTGCTCAGCTGCGGTGTCTCCACAGGAATTGGAGCAGCTTGGAAGGTGGCTAACGTGGAAGAAGGCTCCACCATTGCAATTTTTGGCCTTGGTGCTGTTGGACTTGCGGTTGCAGAAGGAGCCAGGCTACGAGGAGCCGCAAAGATTATTGGTATTGATACCAATTCTGATAAATTCGAGCTAGGTAAGAAATTTGGTTTTACGGATTTCATCAATCCGACCTTATGCGGAGAAAAGAAGATTAGTGAGGTCATTAAAGAAATGACAGAAGGAGGAGTTGACTATAGTTTCGAATGCGTTGGCTTAGCTTCTTTACTTAACGAGGCTTTCATCAGTACCCGCACGGGAACAGGTAAAACTGTAATGTTGGGGATGGAGAAGCATGCAGCGCCAATTAGTTTGGGTAGTTTTGATCTTTTAAGAGGCAGAGTTATTTGCGGAAGCTTGTTCGGTGGTCTGAAATCCAAACTTGATATTCCCATTCTAGTGGATCATTACCTAAAAAAGGAGCTCAATCTGGATAGTTTCATTACACACGAACTGAATTTCAAAGAAATTAATAAGGCTTTCGCTTTATTAGAGGAAGGAAAGTCTCTCCGCTGCATTCTATGGATGGATAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00010 ko00071 ko00350 ko00625 ko00626 ko00680 ko00830 ko00980 ko00982 ko01100 ko01110 ko01120 ko01130 ko01200 ko01220 ko05204 map00010 map00071 map00350 map00625 map00626 map00680 map00830 map00980 map00982 map01100 map01110 map01120 map01130 map01200 map01220 map05204

Pfam Domains

Protein Families

ADH_N ADH_zinc_N

Protein Analysis

388

Amino Acids

42.53

Weight (kDa)

6.1

Isoelectric Point (pI)

26.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ADH_N	PF08240	41 - 172	3.2e-21	Alcohol dehydrogenase GroES-like domain
ADH_zinc_N	PF00107	213 - 261	3.3e-08	Zinc-binding dehydrogenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001983)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22430 AT1G22430 AT1G22430 AT1G22430 AT1G22430 AT1G22440 AT4G22110 AT4G22110 AT4G22110
fragaria_vesca	FvH4_7g34200 FvH4_7g34200 FvH4_7g34200
malus_domestica	MD01G1238700.v1.1
prunus_persica	Prupe.2G328800_v2.0.a1
pyrus_communis	pycom01g24620
rosa_chinensis	RchiOBHm_Chr1g0315691 RchiOBHm_Chr1g0384561
rosa_laevigata	RLG00000026032 RLG00000030737 RLG00000030739
rosa_multiflora	Rmu_co8484511.1_g000001 Rmu_sc0004180.1_g000010 Rmu_sc0006005.1_g000011
rosa_roxburghii	Rroxscaffold_4G00276590 Rroxscaffold_4G00318470 Rroxscaffold_4G00331540
rosa_rugosa	Rorug01G0004700 Rorug01G0066000 Rorug01G0066000 Rorug01G0448900 Rorug01G0449000 Rorug04G0062000 Rorug04G0062100 Rorug04G0062200 RorugMtG0004000.1
rosa_samantha	Rh1AG015900 Rh1AG474000 Rh1BG008400 Rh1BG432100 Rh1CG013400 Rh1CG445300 Rh1DG009100 Rh1DG464700
rosa_wichuraiana	Rw1G000930 Rw1G039850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	291
AciI	CCGC	8 cut(s)	539, 555, 650, 681, 771, 883, 981, 1141
AclWI	GGATC	3 cut(s)	101, 114, 1041
AcsI	RAATTY	3 cut(s)	716, 734, 1087
AcuI	CTGAAG	1 cut(s)	414
AcvI	CACGTG	1 cut(s)	103
AcyI	GRCGYC	1 cut(s)	288
AfaI	GTAC	2 cut(s)	148, 880
AfiI	CCNNNNNNNGG	1 cut(s)	1048
AgsI	TTSAA	6 cut(s)	92, 204, 345, 414, 421, 1093
AjnI	CCWGG	1 cut(s)	665
AleI	CACNNNNGTG	1 cut(s)	485
AluBI	AGCT	8 cut(s)	119, 189, 552, 581, 724, 851, 987, 1054
AluI	AGCT	8 cut(s)	119, 189, 552, 581, 724, 851, 987, 1054
Alw21I	GWGCWC	1 cut(s)	1056
Alw26I	GTCTC	3 cut(s)	466, 565, 1140
AlwI	GGATC	3 cut(s)	101, 114, 1041
AoxI	GGCC	1 cut(s)	628
ApeKI	GCWGC	5 cut(s)	53, 552, 578, 929, 1143
ApoI	RAATTY	3 cut(s)	716, 734, 1087
ArsI	GACNNNNNNTTYG	4 cut(s)	468, 500, 815, 847
AseI	ATTAAT	1 cut(s)	1101
Asp700I	GAANNNNTTC	2 cut(s)	409, 441
AspA2I	CCTAGG	1 cut(s)	212
AspLEI	GCGC	1 cut(s)	934
AspS9I	GGNCC	1 cut(s)	194
AsuHPI	GGTGA	3 cut(s)	97, 269, 296
AsuII	TTCGAA	1 cut(s)	834
AvaII	GGWCC	1 cut(s)	194
AvrII	CCTAGG	1 cut(s)	212
BamHI	GGATCC	1 cut(s)	106
BanII	GRGCYC	1 cut(s)	1056
BbrPI	CACGTG	1 cut(s)	103
BbsI	GAAGAC	1 cut(s)	99
Bbv12I	GWGCWC	1 cut(s)	1056
BbvI	GCAGC	5 cut(s)	65, 539, 590, 941, 1130
BccI	CCATC	2 cut(s)	910, 1150
BciT130I	CCWGG	1 cut(s)	667
BcoDI	GTCTC	3 cut(s)	466, 565, 1140
BfaI	CTAG	4 cut(s)	21, 213, 725, 1028
BfmI	CTRYAG	1 cut(s)	826
BfoI	RGCGCY	1 cut(s)	935
BisI	GCNGC	7 cut(s)	54, 540, 553, 579, 681, 930, 1144
BlnI	CCTAGG	1 cut(s)	212
BlpI	GCTNAGC	2 cut(s)	548, 847
BlsI	GCNGC	7 cut(s)	55, 541, 554, 580, 682, 931, 1145
Bme1390I	CCNGG	1 cut(s)	667
Bme18I	GGWCC	1 cut(s)	194
BmgT120I	GGNCC	1 cut(s)	194
BmiI	GGNNCC	4 cut(s)	108, 610, 664, 679
BmrFI	CCNGG	1 cut(s)	667
BpiI	GAAGAC	1 cut(s)	99
Bpu1102I	GCTNAGC	2 cut(s)	548, 847
Bpu14I	TTCGAA	1 cut(s)	834
BpuEI	CTTGAG	1 cut(s)	448
BsaAI	YACGTR	1 cut(s)	103
BsaHI	GRCGYC	1 cut(s)	288
BsaJI	CCNNGG	2 cut(s)	212, 631
Bsc4I	CCNNNNNNNGG	1 cut(s)	1048
Bse1I	ACTGG	2 cut(s)	299, 359
Bse3DI	GCAATG	1 cut(s)	615
BseBI	CCWGG	1 cut(s)	667
BseDI	CCNNGG	2 cut(s)	212, 631
BseGI	GGATG	4 cut(s)	96, 307, 921, 1161
BseLI	CCNNNNNNNGG	1 cut(s)	1048
BseMI	GCAATG	1 cut(s)	615
BseMII	CTCAG	1 cut(s)	562
BseNI	ACTGG	2 cut(s)	299, 359
BseRI	GAGGAG	2 cut(s)	690, 831
BseXI	GCAGC	5 cut(s)	65, 539, 590, 941, 1130
BshFI	GGCC	1 cut(s)	630
BsiHKAI	GWGCWC	1 cut(s)	1056
BslI	CCNNNNNNNGG	1 cut(s)	1048
BsmAI	GTCTC	3 cut(s)	466, 565, 1140
BsmI	GAATGC	3 cut(s)	329, 842, 1146
BsnI	GGCC	1 cut(s)	630
Bsp119I	TTCGAA	1 cut(s)	834
Bsp1286I	GDGCHC	1 cut(s)	1056
Bsp143I	GATC	4 cut(s)	106, 166, 955, 1033
Bsp1720I	GCTNAGC	2 cut(s)	548, 847
BspACI	CCGC	8 cut(s)	539, 555, 650, 681, 771, 883, 981, 1141
BspANI	GGCC	1 cut(s)	630
BspCNI	CTCAG	1 cut(s)	561
BspLI	GGNNCC	4 cut(s)	108, 610, 664, 679
BspPI	GGATC	3 cut(s)	101, 114, 1041
BspT104I	TTCGAA	1 cut(s)	834
BsrDI	GCAATG	1 cut(s)	615
BsrI	ACTGG	2 cut(s)	299, 359
BssECI	CCNNGG	2 cut(s)	212, 631
BssMI	GATC	4 cut(s)	106, 166, 955, 1033
BssNI	GRCGYC	1 cut(s)	288
BssT1I	CCWWGG	2 cut(s)	212, 631
Bst2UI	CCWGG	1 cut(s)	667
Bst4CI	ACNGT	2 cut(s)	484, 904
BstACI	GRCGYC	1 cut(s)	288
BstAPI	GCANNNNNTGC	1 cut(s)	333
BstBAI	YACGTR	1 cut(s)	103
BstBI	TTCGAA	1 cut(s)	834
BstC8I	GCNNGC	1 cut(s)	927
BstDEI	CTNAG	3 cut(s)	185, 548, 847
BstENI	CCTNNNNNAGG	1 cut(s)	1046
BstF5I	GGATG	4 cut(s)	96, 307, 921, 1161
BstH2I	RGCGCY	1 cut(s)	935
BstHHI	GCGC	1 cut(s)	934
BstKTI	GATC	4 cut(s)	109, 169, 958, 1036
BstMAI	GTCTC	3 cut(s)	466, 565, 1140
BstMBI	GATC	4 cut(s)	106, 166, 955, 1033
BstMWI	GCNNNNNNNGC	4 cut(s)	77, 333, 662, 931
BstNI	CCWGG	1 cut(s)	667
BstNSI	RCATGY	2 cut(s)	48, 929
BstSCI	CCNGG	1 cut(s)	665
BstSFI	CTRYAG	1 cut(s)	826
BstV1I	GCAGC	5 cut(s)	65, 539, 590, 941, 1130
BstV2I	GAAGAC	1 cut(s)	99
BstX2I	RGATCY	1 cut(s)	106
BstXI	CCANNNNNNTGG	1 cut(s)	1030
BstYI	RGATCY	1 cut(s)	106
BsuRI	GGCC	1 cut(s)	630
BtsCI	GGATG	4 cut(s)	96, 307, 921, 1161
BtsIMutI	CAGTG	1 cut(s)	162
Cac8I	GCNNGC	1 cut(s)	927
CfoI	GCGC	1 cut(s)	934
Cfr13I	GGNCC	1 cut(s)	194
Csp6I	GTAC	2 cut(s)	147, 879
CspCI	CAANNNNNGTGG	2 cut(s)	553, 588
CviAII	CATG	2 cut(s)	45, 926
CviQI	GTAC	2 cut(s)	147, 879
DdeI	CTNAG	3 cut(s)	185, 548, 847
DpnI	GATC	4 cut(s)	108, 168, 957, 1035
DpnII	GATC	4 cut(s)	106, 166, 955, 1033
DraI	TTTAAA	1 cut(s)	277
Ecl136II	GAGCTC	1 cut(s)	1054
Eco130I	CCWWGG	2 cut(s)	212, 631
Eco24I	GRGCYC	1 cut(s)	1056
Eco47I	GGWCC	1 cut(s)	194
Eco53kI	GAGCTC	1 cut(s)	1054
Eco57I	CTGAAG	1 cut(s)	414
Eco72I	CACGTG	1 cut(s)	103
EcoICRI	GAGCTC	1 cut(s)	1054
EcoNI	CCTNNNNNAGG	1 cut(s)	1046
EcoRII	CCWGG	1 cut(s)	665
EcoT14I	CCWWGG	2 cut(s)	212, 631
EcoT38I	GRGCYC	1 cut(s)	1056
ErhI	CCWWGG	2 cut(s)	212, 631
FaeI	CATG	2 cut(s)	48, 929
FatI	CATG	2 cut(s)	44, 925
FauI	CCCGC	1 cut(s)	890
Fnu4HI	GCNGC	7 cut(s)	54, 540, 553, 579, 681, 930, 1144
FokI	GGATG	3 cut(s)	83, 294, 928
FriOI	GRGCYC	1 cut(s)	1056
Fsp4HI	GCNGC	7 cut(s)	54, 540, 553, 579, 681, 930, 1144
FspBI	CTAG	4 cut(s)	21, 213, 725, 1028
GlaI	GCGC	1 cut(s)	933
GluI	GCNGC	7 cut(s)	54, 540, 553, 579, 681, 930, 1144
HaeII	RGCGCY	1 cut(s)	935
HaeIII	GGCC	1 cut(s)	630
HhaI	GCGC	1 cut(s)	934
Hin1I	GRCGYC	1 cut(s)	288
Hin1II	CATG	2 cut(s)	48, 929
Hin6I	GCGC	1 cut(s)	932
HinP1I	GCGC	1 cut(s)	932
HincII	GTYRAC	1 cut(s)	823
HindII	GTYRAC	1 cut(s)	823
HindIII	AAGCTT	3 cut(s)	117, 187, 985
HinfI	GANTC	4 cut(s)	217, 417, 425, 442
HphI	GGTGA	3 cut(s)	97, 269, 296
Hpy166II	GTNNAC	2 cut(s)	268, 823
Hpy188I	TCNGA	4 cut(s)	475, 712, 762, 1002
Hpy188III	TCNNGA	6 cut(s)	178, 247, 414, 432, 518, 1061
Hpy8I	GTNNAC	2 cut(s)	268, 823
Hpy99I	CGWCG	2 cut(s)	293, 488
HpyAV	CCTTC	6 cut(s)	23, 580, 599, 653, 806, 1121
HpyCH4III	ACNGT	2 cut(s)	484, 904
HpyCH4IV	ACGT	4 cut(s)	102, 264, 288, 597
HpyCH4V	TGCA	8 cut(s)	48, 327, 336, 497, 620, 656, 929, 1146
HpyF10VI	GCNNNNNNNGC	4 cut(s)	77, 333, 662, 931
HpyF3I	CTNAG	3 cut(s)	185, 548, 847
HpySE526I	ACGT	4 cut(s)	102, 264, 288, 597
Hsp92I	GRCGYC	1 cut(s)	288
Hsp92II	CATG	2 cut(s)	48, 929
HspAI	GCGC	1 cut(s)	932
Kzo9I	GATC	4 cut(s)	106, 166, 955, 1033
LmnI	GCTCC	5 cut(s)	575, 614, 662, 677, 1051
Lsp1109I	GCAGC	5 cut(s)	65, 539, 590, 941, 1130
MaeI	CTAG	4 cut(s)	21, 213, 725, 1028
MaeII	ACGT	4 cut(s)	102, 264, 288, 597
MaeIII	GTNAC	3 cut(s)	158, 284, 359
MalI	GATC	4 cut(s)	108, 168, 957, 1035
MboI	GATC	4 cut(s)	106, 166, 955, 1033
MboII	GAAGA	7 cut(s)	104, 332, 333, 386, 420, 614, 793
MflI	RGATCY	1 cut(s)	106
MhlI	GDGCHC	1 cut(s)	1056
MmeI	TCCRAC	2 cut(s)	622, 785
MnlI	CCTC	6 cut(s)	668, 784, 809, 859, 959, 1117
MroXI	GAANNNNTTC	2 cut(s)	409, 441
MseI	TTAA	6 cut(s)	135, 276, 798, 861, 962, 1101
MslI	CAYNNNNRTG	3 cut(s)	101, 485, 1028
MspA1I	CMGCKG	2 cut(s)	552, 1143
MspR9I	CCNGG	1 cut(s)	667
Mva1269I	GAATGC	3 cut(s)	329, 842, 1146
MvaI	CCWGG	1 cut(s)	667
MwoI	GCNNNNNNNGC	4 cut(s)	77, 333, 662, 931
NdeII	GATC	4 cut(s)	106, 166, 955, 1033
NlaIII	CATG	2 cut(s)	48, 929
NlaIV	GGNNCC	4 cut(s)	108, 610, 664, 679
NmuCI	GTSAC	3 cut(s)	158, 284, 359
NspI	RCATGY	2 cut(s)	48, 929
NspV	TTCGAA	1 cut(s)	834
OliI	CACNNNNGTG	1 cut(s)	485
PaeI	GCATGC	1 cut(s)	929
PcsI	WCGNNNNNNNCGW	1 cut(s)	243
PctI	GAATGC	3 cut(s)	329, 842, 1146
PdmI	GAANNNNTTC	2 cut(s)	409, 441
PfeI	GAWTC	4 cut(s)	217, 417, 425, 442
PkrI	GCNGC	7 cut(s)	55, 541, 554, 580, 682, 931, 1145
PmaCI	CACGTG	1 cut(s)	103
PmlI	CACGTG	1 cut(s)	103
Ppu21I	YACGTR	1 cut(s)	103
PshBI	ATTAAT	1 cut(s)	1101
Psp124BI	GAGCTC	1 cut(s)	1056
Psp6I	CCWGG	1 cut(s)	665
PspCI	CACGTG	1 cut(s)	103
PspGI	CCWGG	1 cut(s)	665
PspN4I	GGNNCC	4 cut(s)	108, 610, 664, 679
PspPI	GGNCC	1 cut(s)	194
PsuI	RGATCY	1 cut(s)	106
PvuII	CAGCTG	1 cut(s)	552
RsaI	GTAC	2 cut(s)	148, 880
RsaNI	GTAC	2 cut(s)	147, 879
RseI	CAYNNNNRTG	3 cut(s)	101, 485, 1028
SacI	GAGCTC	1 cut(s)	1056
SaqAI	TTAA	6 cut(s)	135, 276, 798, 861, 962, 1101
SatI	GCNGC	7 cut(s)	54, 540, 553, 579, 681, 930, 1144
Sau3AI	GATC	4 cut(s)	106, 166, 955, 1033
Sau96I	GGNCC	1 cut(s)	194
ScrFI	CCNGG	1 cut(s)	667
SduI	GDGCHC	1 cut(s)	1056
SfcI	CTRYAG	1 cut(s)	826
SfuI	TTCGAA	1 cut(s)	834
SinI	GGWCC	1 cut(s)	194
SmiMI	CAYNNNNRTG	3 cut(s)	101, 485, 1028
SmlI	CTYRAG	1 cut(s)	463
SmoI	CTYRAG	1 cut(s)	463
SphI	GCATGC	1 cut(s)	929
SsiI	CCGC	8 cut(s)	539, 555, 650, 681, 771, 883, 981, 1141
SspMI	CTAG	4 cut(s)	21, 213, 725, 1028
SstI	GAGCTC	1 cut(s)	1056
StyD4I	CCNGG	1 cut(s)	665
StyI	CCWWGG	2 cut(s)	212, 631
TaaI	ACNGT	2 cut(s)	484, 904
TaiI	ACGT	4 cut(s)	105, 267, 291, 600
TaqI	TCGA	3 cut(s)	246, 720, 834
TatI	WGTACW	1 cut(s)	146
TauI	GCSGC	2 cut(s)	542, 683
TfiI	GAWTC	4 cut(s)	217, 417, 425, 442
Tru1I	TTAA	6 cut(s)	135, 276, 798, 861, 962, 1101
Tru9I	TTAA	6 cut(s)	135, 276, 798, 861, 962, 1101
TscAI	CASTG	1 cut(s)	169
TseFI	GTSAC	3 cut(s)	158, 284, 359
TseI	GCWGC	5 cut(s)	53, 552, 578, 929, 1143
Tsp45I	GTSAC	3 cut(s)	158, 284, 359
TspDTI	ATGAA	7 cut(s)	138, 296, 370, 434, 742, 862, 1060
TspGWI	ACGGA	2 cut(s)	285, 761
TspRI	CASTG	1 cut(s)	169
VpaK11BI	GGWCC	1 cut(s)	194
VspI	ATTAAT	1 cut(s)	1101
XagI	CCTNNNNNAGG	1 cut(s)	1046
XapI	RAATTY	3 cut(s)	716, 734, 1087
XceI	RCATGY	2 cut(s)	48, 929
XmaJI	CCTAGG	1 cut(s)	212
XmnI	GAANNNNTTC	2 cut(s)	409, 441
XspI	CTAG	4 cut(s)	21, 213, 725, 1028
ZraI	GACGTC	1 cut(s)	289

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.