AT1G22440
ERF Family

Contains the following InterPro domains GroES-like (InterPro IPR011032), Alcohol dehydrogenase GroES-like (InterPro IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro IPR002328), Alcohol dehydrogenase, C-terminal (InterPro IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro IPR002085)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
7922276 .. 7925097
2822 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G22440.1

Sequence Viewer

Length: 1161 bp
ATGGACAAGGCTTCAATCACTGAAGGAAAGCCGATTCGATGCAAAGCAGCAATCTTAAGAAAAGCAGGAGAACCATTGGTGATAGAAGAGATCCAAGTTGATCCACCTCAAGCTTACGAAGTCAGAATCAAAATTTTATGCACTTCTCTATGTCACACGGATGTTACTTTCTGGAAACTAGACAGTGGACCGCTTGCAAGATTTCCTAGGATTCTAGGTCATGAAGCAGTCGGTGTGGTCGAGAGTATTGGAGAAAAGGTAGACGGATTTAAACAAGGCGACGTCGTTTTGCCAGTGTTTCATCCTCAATGTGAAGAATGCAAAGAGTGCATATCTCCAAAGAGCAACTGGTGCACAAAATATACAAACGATTATTTATCAAACACAAGACGATATGGAATGACTTCAAGATTCAAGGACTCTCGTGGAGAAGATATTCACCATTTCATCTTTGTCTCAAGTTTTACTGAATATACCGTTGTAGATATCGCACATCTCGTCAAAATATCTCCTGAAATTCCCGTTGATATAGCGGCCTTGCTCAGCTGCAGTGTTGCCACAGGACTTGGAGCTGCGTGGAAAGTGGCTGACGTAGAGGAAGGTTCCACTGTCGTTATCTTTGGCCTTGGTGCTGTTGGACTAGCGGTTGCAGAAGGAGTCAGATTGCGTGGAGCCGCAAAAATCATCGGTGTGGATCTCAATCCCGCGAAATTTGAAATAGGTAAAAGATTTGGAATCACAGATTTTGTCAATCCTGCTTTGTGTGGGGAGAAGACAATTAGCGAGGTGATTAGAGAAATGACAGATGTAGGAGCTGACTACAGTTTTGAATGCATTGGTTTAGCTTCCTTGATGGAAGAGGCATTCAAGAGTACTCGCCCGGGATCGGGTAAAACGATAGTATTGGGGATGGAACAAAAGGCTTTGCCAATAAGCTTGGGTAGTTATGATCTTCTCAGAGGCAGAACTGTATGCGGCACTTTATTTGGCGGTTTGAAACCCAAACTTGATATTCCTATTCTCGTGGATCGTTATTTGAAAAAGGAGCTTAATCTAGAGGATCTGATTACACACGAATTAAGCTTTGAAGAAATTAACAAAGCTTTCCATTTATTGGCTGAGGGAAACTCTATCCGTTGCATTATATGGATGGATAAATAG

Protein Analysis

386

Amino Acids

42.38

Weight (kDa)

5.73

Isoelectric Point (pI)

31.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 39 - 170 1.9e-19 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N PF00107 211 - 335 2.3e-22 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 285
AccB7I CCANNNNNTGG 1 cut(s) 1114
AccI GTMKAC 1 cut(s) 261
AccII CGCG 1 cut(s) 707
AciI CCGC 7 cut(s) 191, 533, 644, 675, 705, 975, 990
AclWI GGATC 6 cut(s) 85, 95, 702, 892, 1035, 1068
AcsI RAATTY 3 cut(s) 132, 516, 710
AcuI CTGAAG 1 cut(s) 42
AcyI GRCGYC 1 cut(s) 282
AfaI GTAC 1 cut(s) 874
AfiI CCNNNNNNNGG 3 cut(s) 886, 887, 1114
AflII CTTAAG 1 cut(s) 55
AgsI TTSAA 9 cut(s) 15, 408, 415, 716, 830, 868, 997, 1039, 1088
AluBI AGCT 9 cut(s) 113, 546, 572, 815, 845, 936, 1048, 1083, 1103
AluI AGCT 9 cut(s) 113, 546, 572, 815, 845, 936, 1048, 1083, 1103
Alw21I GWGCWC 1 cut(s) 356
Alw26I GTCTC 1 cut(s) 460
Alw44I GTGCAC 1 cut(s) 352
AlwI GGATC 6 cut(s) 85, 95, 702, 892, 1035, 1068
Ama87I CYCGRG 1 cut(s) 880
AoxI GGCC 2 cut(s) 534, 622
ApaLI GTGCAC 1 cut(s) 352
ApeKI GCWGC 3 cut(s) 47, 546, 572
ApoI RAATTY 3 cut(s) 132, 516, 710
ArsI GACNNNNNNTTYG 2 cut(s) 809, 841
Asp700I GAANNNNTTC 2 cut(s) 403, 435
AspA2I CCTAGG 1 cut(s) 206
AspS9I GGNCC 1 cut(s) 188
AsuC2I CCSGG 2 cut(s) 881, 882
AsuHPI GGTGA 3 cut(s) 91, 431, 799
AvaI CYCGRG 1 cut(s) 880
AvaII GGWCC 1 cut(s) 188
AvrII CCTAGG 1 cut(s) 206
BaeGI GKGCMC 1 cut(s) 356
BauI CACGAG 2 cut(s) 423, 1022
BbsI GAAGAC 1 cut(s) 779
Bbv12I GWGCWC 1 cut(s) 356
BbvCI CCTCAGC 1 cut(s) 1119
BbvI GCAGC 3 cut(s) 59, 533, 559
BccI CCATC 3 cut(s) 847, 904, 1144
BcnI CCSGG 2 cut(s) 881, 882
BcoDI GTCTC 1 cut(s) 460
BfaI CTAG 5 cut(s) 179, 207, 215, 641, 1055
BfmI CTRYAG 2 cut(s) 547, 820
BfrI CTTAAG 1 cut(s) 55
BisI GCNGC 6 cut(s) 48, 534, 547, 573, 675, 976
BlnI CCTAGG 1 cut(s) 206
BlpI GCTNAGC 1 cut(s) 542
BlsI GCNGC 6 cut(s) 49, 535, 548, 574, 676, 977
BmcAI AGTACT 1 cut(s) 874
Bme1390I CCNGG 2 cut(s) 881, 882
Bme18I GGWCC 1 cut(s) 188
BmeT110I CYCGRG 1 cut(s) 880
BmgT120I GGNCC 1 cut(s) 188
BmiI GGNNCC 2 cut(s) 604, 673
BmrFI CCNGG 2 cut(s) 881, 882
BmsI GCATC 1 cut(s) 29
BpiI GAAGAC 1 cut(s) 779
BplI GAGNNNNNCTC 2 cut(s) 1112, 1144
Bpu10I CCTNAGC 1 cut(s) 1119
Bpu1102I GCTNAGC 1 cut(s) 542
BpuEI CTTGAG 2 cut(s) 93, 442
BpuMI CCSGG 2 cut(s) 881, 882
BsaBI GATNNNNATC 1 cut(s) 699
BsaHI GRCGYC 1 cut(s) 282
BsaJI CCNNGG 3 cut(s) 206, 625, 880
BsaXI ACNNNNNCTCC 2 cut(s) 243, 273
Bsc4I CCNNNNNNNGG 3 cut(s) 886, 887, 1114
Bse1I ACTGG 2 cut(s) 293, 353
Bse8I GATNNNNATC 1 cut(s) 699
BseDI CCNNGG 3 cut(s) 206, 625, 880
BseGI GGATG 4 cut(s) 166, 301, 915, 1155
BseJI GATNNNNATC 1 cut(s) 699
BseLI CCNNNNNNNGG 3 cut(s) 886, 887, 1114
BseMII CTCAG 3 cut(s) 556, 970, 1110
BseNI ACTGG 2 cut(s) 293, 353
BseSI GKGCMC 1 cut(s) 356
BseXI GCAGC 3 cut(s) 59, 533, 559
Bsh1236I CGCG 1 cut(s) 707
BshFI GGCC 2 cut(s) 536, 624
BsiHKAI GWGCWC 1 cut(s) 356
BsiHKCI CYCGRG 1 cut(s) 880
BsiSI CCGG 1 cut(s) 881
BslI CCNNNNNNNGG 3 cut(s) 886, 887, 1114
BsmAI GTCTC 1 cut(s) 460
BsmI GAATGC 3 cut(s) 323, 836, 863
BsnI GGCC 2 cut(s) 536, 624
BsoBI CYCGRG 1 cut(s) 880
Bsp1286I GDGCHC 1 cut(s) 356
Bsp143I GATC 7 cut(s) 90, 100, 694, 884, 949, 1027, 1060
Bsp1720I GCTNAGC 1 cut(s) 542
BspACI CCGC 7 cut(s) 191, 533, 644, 675, 705, 975, 990
BspANI GGCC 2 cut(s) 536, 624
BspCNI CTCAG 3 cut(s) 555, 969, 1111
BspFNI CGCG 1 cut(s) 707
BspHI TCATGA 1 cut(s) 220
BspLI GGNNCC 2 cut(s) 604, 673
BspMAI CTGCAG 1 cut(s) 551
BspPI GGATC 6 cut(s) 85, 95, 702, 892, 1035, 1068
BspTI CTTAAG 1 cut(s) 55
BsrI ACTGG 2 cut(s) 293, 353
BssECI CCNNGG 3 cut(s) 206, 625, 880
BssMI GATC 7 cut(s) 90, 100, 694, 884, 949, 1027, 1060
BssNI GRCGYC 1 cut(s) 282
BssSI CACGAG 2 cut(s) 423, 1022
BssT1I CCWWGG 2 cut(s) 206, 625
Bst2BI CACGAG 2 cut(s) 423, 1022
Bst4CI ACNGT 5 cut(s) 185, 478, 610, 824, 970
Bst6I CTCTTC 2 cut(s) 81, 852
BstACI GRCGYC 1 cut(s) 282
BstAFI CTTAAG 1 cut(s) 55
BstAPI GCANNNNNTGC 2 cut(s) 327, 351
BstC8I GCNNGC 1 cut(s) 195
BstDEI CTNAG 3 cut(s) 542, 956, 1119
BstF5I GGATG 4 cut(s) 166, 301, 915, 1155
BstFNI CGCG 1 cut(s) 707
BstKTI GATC 7 cut(s) 93, 103, 697, 887, 952, 1030, 1063
BstMAI GTCTC 1 cut(s) 460
BstMBI GATC 7 cut(s) 90, 100, 694, 884, 949, 1027, 1060
BstMWI GCNNNNNNNGC 2 cut(s) 327, 351
BstSCI CCNGG 2 cut(s) 879, 880
BstSFI CTRYAG 2 cut(s) 547, 820
BstSLI GKGCMC 1 cut(s) 356
BstUI CGCG 1 cut(s) 707
BstV1I GCAGC 3 cut(s) 59, 533, 559
BstV2I GAAGAC 1 cut(s) 779
BstX2I RGATCY 3 cut(s) 90, 694, 1060
BstYI RGATCY 3 cut(s) 90, 694, 1060
BsuRI GGCC 2 cut(s) 536, 624
BtsCI GGATG 4 cut(s) 166, 301, 915, 1155
BtsI GCAGTG 1 cut(s) 556
BtsIMutI CAGTG 5 cut(s) 18, 190, 300, 556, 606
Cac8I GCNNGC 1 cut(s) 195
CciI TCATGA 1 cut(s) 220
Cfr13I GGNCC 1 cut(s) 188
Cfr9I CCCGGG 1 cut(s) 880
Csp6I GTAC 1 cut(s) 873
CspCI CAANNNNNGTGG 2 cut(s) 547, 582
CviAII CATG 1 cut(s) 221
CviQI GTAC 1 cut(s) 873
DdeI CTNAG 3 cut(s) 542, 956, 1119
DpnI GATC 7 cut(s) 92, 102, 696, 886, 951, 1029, 1062
DpnII GATC 7 cut(s) 90, 100, 694, 884, 949, 1027, 1060
DraI TTTAAA 1 cut(s) 271
Eam1104I CTCTTC 2 cut(s) 81, 852
EarI CTCTTC 2 cut(s) 81, 852
Eco130I CCWWGG 2 cut(s) 206, 625
Eco32I GATATC 1 cut(s) 487
Eco47I GGWCC 1 cut(s) 188
Eco57I CTGAAG 1 cut(s) 42
Eco88I CYCGRG 1 cut(s) 880
EcoRV GATATC 1 cut(s) 487
EcoT14I CCWWGG 2 cut(s) 206, 625
EcoT22I ATGCAT 1 cut(s) 836
ErhI CCWWGG 2 cut(s) 206, 625
FaeI CATG 1 cut(s) 224
FatI CATG 1 cut(s) 220
FauI CCCGC 1 cut(s) 712
FblI GTMKAC 1 cut(s) 261
Fnu4HI GCNGC 6 cut(s) 48, 534, 547, 573, 675, 976
FokI GGATG 3 cut(s) 173, 288, 922
Fsp4HI GCNGC 6 cut(s) 48, 534, 547, 573, 675, 976
FspBI CTAG 5 cut(s) 179, 207, 215, 641, 1055
GluI GCNGC 6 cut(s) 48, 534, 547, 573, 675, 976
HaeIII GGCC 2 cut(s) 536, 624
HapII CCGG 1 cut(s) 881
Hin1I GRCGYC 1 cut(s) 282
Hin1II CATG 1 cut(s) 224
HindIII AAGCTT 4 cut(s) 111, 934, 1081, 1101
HinfI GANTC 7 cut(s) 34, 126, 211, 411, 419, 657, 735
HpaII CCGG 1 cut(s) 881
HphI GGTGA 3 cut(s) 91, 431, 799
Hpy166II GTNNAC 3 cut(s) 188, 262, 354
Hpy188I TCNGA 4 cut(s) 125, 662, 959, 1065
Hpy188III TCNNGA 7 cut(s) 172, 221, 241, 408, 512, 868, 1055
Hpy8I GTNNAC 3 cut(s) 188, 262, 354
Hpy99I CGWCG 2 cut(s) 284, 287
HpyAV CCTTC 3 cut(s) 17, 593, 647
HpyCH4III ACNGT 5 cut(s) 185, 478, 610, 824, 970
HpyCH4IV ACGT 2 cut(s) 282, 591
HpyF10VI GCNNNNNNNGC 2 cut(s) 327, 351
HpyF3I CTNAG 3 cut(s) 542, 956, 1119
HpySE526I ACGT 2 cut(s) 282, 591
Hsp92I GRCGYC 1 cut(s) 282
Hsp92II CATG 1 cut(s) 224
Kzo9I GATC 7 cut(s) 90, 100, 694, 884, 949, 1027, 1060
LmnI GCTCC 4 cut(s) 569, 671, 812, 1045
LpnPI CCDG 8 cut(s) 51, 157, 306, 334, 525, 546, 768, 894
Lsp1109I GCAGC 3 cut(s) 59, 533, 559
LweI GCATC 1 cut(s) 29
MaeI CTAG 5 cut(s) 179, 207, 215, 641, 1055
MaeII ACGT 2 cut(s) 282, 591
MaeIII GTNAC 2 cut(s) 152, 163
MalI GATC 7 cut(s) 92, 102, 696, 886, 951, 1029, 1062
MboI GATC 7 cut(s) 90, 100, 694, 884, 949, 1027, 1060
MboII GAAGA 7 cut(s) 98, 326, 443, 784, 869, 944, 1100
MflI RGATCY 3 cut(s) 90, 694, 1060
MhlI GDGCHC 1 cut(s) 356
MluCI AATT 6 cut(s) 132, 516, 710, 777, 1076, 1092
MlyI GAGTC 2 cut(s) 413, 666
MmeI TCCRAC 1 cut(s) 616
MnlI CCTC 8 cut(s) 117, 315, 589, 778, 853, 953, 1051, 1114
Mph1103I ATGCAT 1 cut(s) 836
MroXI GAANNNNTTC 2 cut(s) 403, 435
MseI TTAA 5 cut(s) 56, 270, 1050, 1079, 1095
MslI CAYNNNNRTG 2 cut(s) 159, 689
MspA1I CMGCKG 1 cut(s) 546
MspCI CTTAAG 1 cut(s) 55
MspI CCGG 1 cut(s) 881
MspR9I CCNGG 2 cut(s) 881, 882
Mva1269I GAATGC 3 cut(s) 323, 836, 863
MvnI CGCG 1 cut(s) 707
MwoI GCNNNNNNNGC 2 cut(s) 327, 351
NciI CCSGG 2 cut(s) 881, 882
NdeII GATC 7 cut(s) 90, 100, 694, 884, 949, 1027, 1060
NlaIII CATG 1 cut(s) 224
NlaIV GGNNCC 2 cut(s) 604, 673
NmuCI GTSAC 1 cut(s) 152
NsiI ATGCAT 1 cut(s) 836
PagI TCATGA 1 cut(s) 220
PcsI WCGNNNNNNNCGW 3 cut(s) 237, 495, 893
PctI GAATGC 3 cut(s) 323, 836, 863
PdmI GAANNNNTTC 2 cut(s) 403, 435
PfeI GAWTC 5 cut(s) 34, 126, 211, 411, 735
PflMI CCANNNNNTGG 1 cut(s) 1114
PkrI GCNGC 6 cut(s) 49, 535, 548, 574, 676, 977
PleI GAGTC 2 cut(s) 413, 665
PpsI GAGTC 2 cut(s) 413, 665
PspN4I GGNNCC 2 cut(s) 604, 673
PspPI GGNCC 1 cut(s) 188
PstI CTGCAG 1 cut(s) 551
PsuI RGATCY 3 cut(s) 90, 694, 1060
PvuII CAGCTG 1 cut(s) 546
RsaI GTAC 1 cut(s) 874
RsaNI GTAC 1 cut(s) 873
RseI CAYNNNNRTG 2 cut(s) 159, 689
SaqAI TTAA 5 cut(s) 56, 270, 1050, 1079, 1095
SatI GCNGC 6 cut(s) 48, 534, 547, 573, 675, 976
Sau3AI GATC 7 cut(s) 90, 100, 694, 884, 949, 1027, 1060
Sau96I GGNCC 1 cut(s) 188
ScaI AGTACT 1 cut(s) 874
SchI GAGTC 2 cut(s) 413, 666
ScrFI CCNGG 2 cut(s) 881, 882
SduI GDGCHC 1 cut(s) 356
SfaNI GCATC 1 cut(s) 29
SfcI CTRYAG 2 cut(s) 547, 820
SinI GGWCC 1 cut(s) 188
SmaI CCCGGG 1 cut(s) 882
SmiMI CAYNNNNRTG 2 cut(s) 159, 689
SmlI CTYRAG 3 cut(s) 55, 108, 457
SmoI CTYRAG 3 cut(s) 55, 108, 457
Sse9I AATT 6 cut(s) 132, 516, 710, 777, 1076, 1092
SsiI CCGC 7 cut(s) 191, 533, 644, 675, 705, 975, 990
SspMI CTAG 5 cut(s) 179, 207, 215, 641, 1055
StyD4I CCNGG 2 cut(s) 879, 880
StyI CCWWGG 2 cut(s) 206, 625
TaaI ACNGT 5 cut(s) 185, 478, 610, 824, 970
TaiI ACGT 2 cut(s) 285, 594
TaqI TCGA 2 cut(s) 37, 240
TasI AATT 6 cut(s) 132, 516, 710, 777, 1076, 1092
TatI WGTACW 1 cut(s) 872
TauI GCSGC 3 cut(s) 536, 677, 978
TfiI GAWTC 5 cut(s) 34, 126, 211, 411, 735
Tru1I TTAA 5 cut(s) 56, 270, 1050, 1079, 1095
Tru9I TTAA 5 cut(s) 56, 270, 1050, 1079, 1095
TscAI CASTG 5 cut(s) 25, 190, 300, 556, 613
TseFI GTSAC 1 cut(s) 152
TseI GCWGC 3 cut(s) 47, 546, 572
Tsp45I GTSAC 1 cut(s) 152
TspDTI ATGAA 3 cut(s) 237, 290, 436
TspGWI ACGGA 3 cut(s) 173, 279, 1124
TspMI CCCGGG 1 cut(s) 880
TspRI CASTG 5 cut(s) 25, 190, 300, 556, 613
Van91I CCANNNNNTGG 1 cut(s) 1114
Vha464I CTTAAG 1 cut(s) 55
VneI GTGCAC 1 cut(s) 352
VpaK11BI GGWCC 1 cut(s) 188
XapI RAATTY 3 cut(s) 132, 516, 710
XbaI TCTAGA 1 cut(s) 1054
XcmI CCANNNNNNNNNTGG 1 cut(s) 345
XmaI CCCGGG 1 cut(s) 880
XmaJI CCTAGG 1 cut(s) 206
XmiI GTMKAC 1 cut(s) 261
XmnI GAANNNNTTC 2 cut(s) 403, 435
XspI CTAG 5 cut(s) 179, 207, 215, 641, 1055
ZraI GACGTC 1 cut(s) 283
ZrmI AGTACT 1 cut(s) 874
Zsp2I ATGCAT 1 cut(s) 836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.