Rh1BG432100

Alcohol dehydrogenase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Forward (+)
54749797 .. 54759459
9663 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG432100.1

Sequence Viewer

Length: 1338 bp
ATGTCAGAAATAAGCAGCAGCTGCGCCTCACAAGTTATAACATGCAAAGCGGCGGTATGTTGGGGAGTGGGAGAAGAGTGCAAGGTGGAAGACATACAAGTAGAGCCACCACAAAAGTGTGAAGTTCGTGTCAAGATGCTCTATGCCAGTCTCTGTCACACTGACATCGTCATCTCCAAAGGATACCCAATTCCTCTTTTCCCTCGCGTTCTTGGACATGAGGGCGTTGGTGTGGTAGAGAGCGTCGGGGAAGAAGTAAACGCAGAGGATTTCAAACAAGGAGACATCGTGATACCAACGTTTGTTTCAGAGTGCCAAGAATGCGAGAATTGCTTGTCAAGCAAGTCCAACTTGTGCCTGAAATATCCGTTGACCTTTAGCGGTCTAATGCTCGATGGTACTTCAAGAATGTCGACTGTCAAGGGACAAAAGATGCTGTACCACCTCTTTTCGTGCTCCACATGGTCAGAGTACATGGTCGTTAACGTCAATTTCCTTGTCAAGCTCCACAACTGGGGTGCTCATGGTACTACTACACCACCTCTGTCCCACGCTAGCTTTCTCTCATGTGGATTCTCTACCGGATTTGGGGCTCCTTGGAAGGAAGCTAAGATTGAAAGAGGATCAACTGTTGCCGTTATTGGTCTCGGTGCTGTTGGATTAGGGGCAGTTGAGGGGGCTAGAATGCAAGGTGCAGCTAGGATCATTGGCGTCGACAAAAATGAGATGAAAAGAGAAAAAGGAATAGCTTTTGGAATGACTGATTTTATAAACCCTGAGAATCACCAATCTCAACATGATCAAGATCATAACAAATCAGTTTCTGAGCTCATCAAAGACTGCACAGATGGAATGGGTGTAGATTATTGCTTTGAGTGCACTGGCGTTGCTTCTTTCATCAATGAAGCCCTAGTAGCCACAAAAATGGGTAAAGGAACAGCAGTCGTAATAGGAACCTCAAGTTCACCAACTCTTCAAATTGATTTTCTCTCCCTAATGAGTGGCAGAACCTTGAAAGGGTCCATGTTTGGAGGGCTCAGAGCGAAAACCGACCTTCCCATTCTAATCAACAAATGCATGAATAAGGAAATGCAACTGGATGAACTCTTGACTCATGAAGTTCCTCTCACAGATATTAACCAAGCATTCGAACTCTTAAAGCAGCCGGAGTGTGTGAAGAGTCAGAACCCAGAACACCAAGCCGCCAAAGTCGAGATCGGAGGAAACTATGAAACTAGCCATGCCCTCCACCGCGAAACCAAATGCATGCGGAGGATGCAGCACAAAGCACATGGAAGAGAGGCTAGATCATTGCCCTCTTCCGCGAAAAAACCATAA

Protein Analysis

445

Amino Acids

48.52

Weight (kDa)

6.32

Isoelectric Point (pI)

44.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 40 - 170 2.6e-20 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N PF00107 218 - 349 5.1e-22 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 38, 770
AccI GTMKAC 2 cut(s) 413, 714
AccII CGCG 3 cut(s) 207, 1254, 1325
AciI CCGC 7 cut(s) 50, 53, 381, 1203, 1252, 1270, 1323
AclI AACGTT 1 cut(s) 299
AclWI GGATC 2 cut(s) 631, 710
AcyI GRCGYC 1 cut(s) 711
AfaI GTAC 4 cut(s) 400, 440, 473, 529
AfiI CCNNNNNNNGG 3 cut(s) 514, 588, 1017
AgsI TTSAA 5 cut(s) 274, 405, 617, 977, 1015
AjuI GAANNNNNNNTTGG 2 cut(s) 289, 321
AleI CACNNNNGTG 1 cut(s) 115
AluBI AGCT 7 cut(s) 21, 505, 558, 608, 698, 749, 829
AluI AGCT 7 cut(s) 21, 505, 558, 608, 698, 749, 829
Alw21I GWGCWC 4 cut(s) 458, 523, 831, 881
Alw26I GTCTC 3 cut(s) 155, 276, 650
Alw44I GTGCAC 1 cut(s) 877
AlwI GGATC 2 cut(s) 631, 710
AlwNI CAGNNNCTG 3 cut(s) 21, 153, 824
ApaLI GTGCAC 1 cut(s) 877
ApeKI GCWGC 6 cut(s) 15, 18, 21, 695, 1162, 1279
AspLEI GCGC 1 cut(s) 26
AspS9I GGNCC 1 cut(s) 1020
AsuHPI GGTGA 2 cut(s) 776, 957
AsuII TTCGAA 1 cut(s) 1149
AsuNHI GCTAGC 1 cut(s) 554
AvaII GGWCC 1 cut(s) 1020
BaeGI GKGCMC 1 cut(s) 881
BaeI ACNNNNGTAYC 2 cut(s) 284, 317
BanII GRGCYC 3 cut(s) 595, 831, 1038
BbsI GAAGAC 1 cut(s) 96
Bbv12I GWGCWC 4 cut(s) 458, 523, 831, 881
BbvI GCAGC 6 cut(s) 8, 27, 30, 707, 1174, 1291
BccI CCATC 2 cut(s) 389, 842
BceAI ACGGC 1 cut(s) 620
BciVI GTATCC 1 cut(s) 176
BclI TGATCA 1 cut(s) 799
BcoDI GTCTC 3 cut(s) 155, 276, 650
BfaI CTAG 6 cut(s) 555, 681, 699, 911, 1236, 1305
BfuI GTATCC 1 cut(s) 176
BisI GCNGC 8 cut(s) 16, 19, 22, 51, 696, 1163, 1203, 1280
BlsI GCNGC 8 cut(s) 17, 20, 23, 52, 697, 1164, 1204, 1281
Bme18I GGWCC 1 cut(s) 1020
BmgT120I GGNCC 1 cut(s) 1020
BmiI GGNNCC 3 cut(s) 594, 955, 1021
BmrI ACTGGG 1 cut(s) 523
BmsI GCATC 3 cut(s) 126, 423, 1266
BmtI GCTAGC 1 cut(s) 558
BmuI ACTGGG 1 cut(s) 523
BpiI GAAGAC 1 cut(s) 96
Bpu14I TTCGAA 1 cut(s) 1149
BpuEI CTTGAG 1 cut(s) 943
BsaBI GATNNNNATC 1 cut(s) 804
BsaHI GRCGYC 1 cut(s) 711
BsaI GGTCTC 1 cut(s) 650
BsaJI CCNNGG 1 cut(s) 596
BsaWI WCCGGW 1 cut(s) 581
BsaXI ACNNNNNCTCC 2 cut(s) 273, 303
Bsc4I CCNNNNNNNGG 3 cut(s) 514, 588, 1017
Bse1I ACTGG 4 cut(s) 147, 518, 886, 1101
Bse3DI GCAATG 1 cut(s) 1310
Bse8I GATNNNNATC 1 cut(s) 804
BseDI CCNNGG 1 cut(s) 596
BseGI GGATG 2 cut(s) 1105, 1281
BseJI GATNNNNATC 1 cut(s) 804
BseLI CCNNNNNNNGG 3 cut(s) 514, 588, 1017
BseMI GCAATG 1 cut(s) 1310
BseMII CTCAG 3 cut(s) 768, 816, 1051
BseNI ACTGG 4 cut(s) 147, 518, 886, 1101
BseSI GKGCMC 1 cut(s) 881
BseXI GCAGC 6 cut(s) 8, 27, 30, 707, 1174, 1291
BsgI GTGCAG 2 cut(s) 714, 826
Bsh1236I CGCG 3 cut(s) 207, 1254, 1325
BsiHKAI GWGCWC 4 cut(s) 458, 523, 831, 881
BsiSI CCGG 2 cut(s) 582, 1166
BslFI GGGAC 2 cut(s) 438, 532
BslI CCNNNNNNNGG 3 cut(s) 514, 588, 1017
BsmAI GTCTC 3 cut(s) 155, 276, 650
BsmFI GGGAC 2 cut(s) 438, 532
BsmI GAATGC 3 cut(s) 326, 690, 1145
Bso31I GGTCTC 1 cut(s) 650
Bsp119I TTCGAA 1 cut(s) 1149
Bsp1286I GDGCHC 6 cut(s) 458, 523, 595, 831, 881, 1038
Bsp143I GATC 6 cut(s) 623, 702, 799, 805, 1215, 1307
BspACI CCGC 7 cut(s) 50, 53, 381, 1203, 1252, 1270, 1323
BspCNI CTCAG 3 cut(s) 769, 817, 1050
BspFNI CGCG 3 cut(s) 207, 1254, 1325
BspHI TCATGA 1 cut(s) 1114
BspLI GGNNCC 3 cut(s) 594, 955, 1021
BspOI GCTAGC 1 cut(s) 558
BspPI GGATC 2 cut(s) 631, 710
BspT104I TTCGAA 1 cut(s) 1149
BspTNI GGTCTC 1 cut(s) 650
BsrDI GCAATG 1 cut(s) 1310
BsrI ACTGG 4 cut(s) 147, 518, 886, 1101
BssECI CCNNGG 1 cut(s) 596
BssMI GATC 6 cut(s) 623, 702, 799, 805, 1215, 1307
BssNI GRCGYC 1 cut(s) 711
BssT1I CCWWGG 1 cut(s) 596
Bst4CI ACNGT 2 cut(s) 418, 631
Bst6I CTCTTC 5 cut(s) 69, 978, 1172, 1291, 1324
BstACI GRCGYC 1 cut(s) 711
BstAPI GCANNNNNTGC 1 cut(s) 21
BstBI TTCGAA 1 cut(s) 1149
BstC8I GCNNGC 2 cut(s) 556, 1268
BstDEI CTNAG 4 cut(s) 609, 777, 825, 1037
BstF5I GGATG 2 cut(s) 1105, 1281
BstFNI CGCG 3 cut(s) 207, 1254, 1325
BstHHI GCGC 1 cut(s) 26
BstKTI GATC 6 cut(s) 626, 705, 802, 808, 1218, 1310
BstMAI GTCTC 3 cut(s) 155, 276, 650
BstMBI GATC 6 cut(s) 623, 702, 799, 805, 1215, 1307
BstMWI GCNNNNNNNGC 7 cut(s) 21, 321, 330, 339, 876, 914, 1276
BstNSI RCATGY 2 cut(s) 45, 1270
BstSLI GKGCMC 1 cut(s) 881
BstUI CGCG 3 cut(s) 207, 1254, 1325
BstV1I GCAGC 6 cut(s) 8, 27, 30, 707, 1174, 1291
BstV2I GAAGAC 1 cut(s) 96
BstXI CCANNNNNNTGG 1 cut(s) 925
BsuI GTATCC 1 cut(s) 176
BtsCI GGATG 2 cut(s) 1105, 1281
BtsIMutI CAGTG 2 cut(s) 159, 879
Cac8I GCNNGC 2 cut(s) 556, 1268
CaiI CAGNNNCTG 3 cut(s) 21, 153, 824
CciI TCATGA 1 cut(s) 1114
CfoI GCGC 1 cut(s) 26
Cfr13I GGNCC 1 cut(s) 1020
CseI GACGC 2 cut(s) 232, 700
Csp6I GTAC 4 cut(s) 399, 439, 472, 528
CviQI GTAC 4 cut(s) 399, 439, 472, 528
DdeI CTNAG 4 cut(s) 609, 777, 825, 1037
DpnI GATC 6 cut(s) 625, 704, 801, 807, 1217, 1309
DpnII GATC 6 cut(s) 623, 702, 799, 805, 1215, 1307
Eam1104I CTCTTC 5 cut(s) 69, 978, 1172, 1291, 1324
EarI CTCTTC 5 cut(s) 69, 978, 1172, 1291, 1324
Ecl136II GAGCTC 1 cut(s) 829
Eco130I CCWWGG 1 cut(s) 596
Eco24I GRGCYC 3 cut(s) 595, 831, 1038
Eco31I GGTCTC 1 cut(s) 650
Eco47I GGWCC 1 cut(s) 1020
Eco53kI GAGCTC 1 cut(s) 829
EcoICRI GAGCTC 1 cut(s) 829
EcoT14I CCWWGG 1 cut(s) 596
EcoT22I ATGCAT 2 cut(s) 1079, 1268
EcoT38I GRGCYC 3 cut(s) 595, 831, 1038
ErhI CCWWGG 1 cut(s) 596
FalI AAGNNNNNCTT 2 cut(s) 335, 367
FaqI GGGAC 2 cut(s) 438, 532
FbaI TGATCA 1 cut(s) 799
FblI GTMKAC 2 cut(s) 413, 714
Fnu4HI GCNGC 8 cut(s) 16, 19, 22, 51, 696, 1163, 1203, 1280
FokI GGATG 2 cut(s) 1112, 1288
FriOI GRGCYC 3 cut(s) 595, 831, 1038
Fsp4HI GCNGC 8 cut(s) 16, 19, 22, 51, 696, 1163, 1203, 1280
FspBI CTAG 6 cut(s) 555, 681, 699, 911, 1236, 1305
GlaI GCGC 1 cut(s) 25
GluI GCNGC 8 cut(s) 16, 19, 22, 51, 696, 1163, 1203, 1280
HapII CCGG 2 cut(s) 582, 1166
HgaI GACGC 2 cut(s) 232, 700
HhaI GCGC 1 cut(s) 26
Hin1I GRCGYC 1 cut(s) 711
Hin6I GCGC 1 cut(s) 24
HinP1I GCGC 1 cut(s) 24
HincII GTYRAC 4 cut(s) 372, 414, 484, 715
HindII GTYRAC 4 cut(s) 372, 414, 484, 715
HinfI GANTC 4 cut(s) 573, 781, 1111, 1180
HpaI GTTAAC 1 cut(s) 484
HpaII CCGG 2 cut(s) 582, 1166
HphI GGTGA 2 cut(s) 776, 957
Hpy166II GTNNAC 7 cut(s) 259, 372, 414, 484, 715, 879, 965
Hpy188I TCNGA 7 cut(s) 7, 310, 469, 826, 1040, 1185, 1220
Hpy188III TCNNGA 7 cut(s) 133, 289, 405, 803, 1108, 1115, 1213
Hpy8I GTNNAC 7 cut(s) 259, 372, 414, 484, 715, 879, 965
Hpy99I CGWCG 2 cut(s) 248, 716
HpyAV CCTTC 2 cut(s) 595, 1064
HpyCH4III ACNGT 2 cut(s) 418, 631
HpyCH4IV ACGT 2 cut(s) 299, 486
HpyF10VI GCNNNNNNNGC 7 cut(s) 21, 321, 330, 339, 876, 914, 1276
HpyF3I CTNAG 4 cut(s) 609, 777, 825, 1037
HpySE526I ACGT 2 cut(s) 299, 486
Hsp92I GRCGYC 1 cut(s) 711
HspAI GCGC 1 cut(s) 24
Ksp22I TGATCA 1 cut(s) 799
KspAI GTTAAC 1 cut(s) 484
Kzo9I GATC 6 cut(s) 623, 702, 799, 805, 1215, 1307
LmnI GCTCC 3 cut(s) 461, 510, 598
LpnPI CCDG 9 cut(s) 160, 371, 499, 595, 789, 867, 1082, 1179, 1203
Lsp1109I GCAGC 6 cut(s) 8, 27, 30, 707, 1174, 1291
LweI GCATC 3 cut(s) 126, 423, 1266
MaeI CTAG 6 cut(s) 555, 681, 699, 911, 1236, 1305
MaeII ACGT 2 cut(s) 299, 486
MaeIII GTNAC 1 cut(s) 155
MalI GATC 6 cut(s) 625, 704, 801, 807, 1217, 1309
MboI GATC 6 cut(s) 623, 702, 799, 805, 1215, 1307
MboII GAAGA 7 cut(s) 86, 101, 263, 965, 1189, 1308, 1311
MhlI GDGCHC 6 cut(s) 458, 523, 595, 831, 881, 1038
MluCI AATT 4 cut(s) 189, 328, 490, 978
MlyI GAGTC 2 cut(s) 1105, 1189
MmeI TCCRAC 2 cut(s) 372, 637
Mph1103I ATGCAT 2 cut(s) 1079, 1268
MseI TTAA 3 cut(s) 483, 1137, 1157
MslI CAYNNNNRTG 2 cut(s) 115, 923
MspA1I CMGCKG 1 cut(s) 21
MspI CCGG 2 cut(s) 582, 1166
Mva1269I GAATGC 3 cut(s) 326, 690, 1145
MvnI CGCG 3 cut(s) 207, 1254, 1325
MwoI GCNNNNNNNGC 7 cut(s) 21, 321, 330, 339, 876, 914, 1276
NdeII GATC 6 cut(s) 623, 702, 799, 805, 1215, 1307
NheI GCTAGC 1 cut(s) 554
NlaIV GGNNCC 3 cut(s) 594, 955, 1021
NmuCI GTSAC 1 cut(s) 155
NsiI ATGCAT 2 cut(s) 1079, 1268
NspI RCATGY 2 cut(s) 45, 1270
NspV TTCGAA 1 cut(s) 1149
OliI CACNNNNGTG 1 cut(s) 115
PaeI GCATGC 1 cut(s) 1270
PagI TCATGA 1 cut(s) 1114
PctI GAATGC 3 cut(s) 326, 690, 1145
PfeI GAWTC 2 cut(s) 573, 781
PflFI GACNNNGTC 1 cut(s) 167
PkrI GCNGC 8 cut(s) 17, 20, 23, 52, 697, 1164, 1204, 1281
PleI GAGTC 2 cut(s) 1105, 1188
PpsI GAGTC 2 cut(s) 1105, 1188
PsiI TTATAA 2 cut(s) 38, 770
Psp124BI GAGCTC 1 cut(s) 831
Psp1406I AACGTT 1 cut(s) 299
PspN4I GGNNCC 3 cut(s) 594, 955, 1021
PspPI GGNCC 1 cut(s) 1020
PstNI CAGNNNCTG 3 cut(s) 21, 153, 824
PsyI GACNNNGTC 1 cut(s) 167
PvuII CAGCTG 1 cut(s) 21
RsaI GTAC 4 cut(s) 400, 440, 473, 529
RsaNI GTAC 4 cut(s) 399, 439, 472, 528
RseI CAYNNNNRTG 2 cut(s) 115, 923
SacI GAGCTC 1 cut(s) 831
SalI GTCGAC 2 cut(s) 412, 713
SaqAI TTAA 3 cut(s) 483, 1137, 1157
SatI GCNGC 8 cut(s) 16, 19, 22, 51, 696, 1163, 1203, 1280
Sau3AI GATC 6 cut(s) 623, 702, 799, 805, 1215, 1307
Sau96I GGNCC 1 cut(s) 1020
SchI GAGTC 2 cut(s) 1105, 1189
SduI GDGCHC 6 cut(s) 458, 523, 595, 831, 881, 1038
SfaNI GCATC 3 cut(s) 126, 423, 1266
SfuI TTCGAA 1 cut(s) 1149
SinI GGWCC 1 cut(s) 1020
SmiMI CAYNNNNRTG 2 cut(s) 115, 923
SmlI CTYRAG 1 cut(s) 958
SmoI CTYRAG 1 cut(s) 958
SphI GCATGC 1 cut(s) 1270
Sse9I AATT 4 cut(s) 189, 328, 490, 978
SsiI CCGC 7 cut(s) 50, 53, 381, 1203, 1252, 1270, 1323
SspMI CTAG 6 cut(s) 555, 681, 699, 911, 1236, 1305
SstI GAGCTC 1 cut(s) 831
StyI CCWWGG 1 cut(s) 596
TaaI ACNGT 2 cut(s) 418, 631
TaiI ACGT 2 cut(s) 302, 489
TaqI TCGA 5 cut(s) 393, 413, 714, 1149, 1212
TasI AATT 4 cut(s) 189, 328, 490, 978
TatI WGTACW 1 cut(s) 471
TauI GCSGC 2 cut(s) 53, 1205
TfiI GAWTC 2 cut(s) 573, 781
Tru1I TTAA 3 cut(s) 483, 1137, 1157
Tru9I TTAA 3 cut(s) 483, 1137, 1157
TscAI CASTG 2 cut(s) 166, 886
TseFI GTSAC 1 cut(s) 155
TseI GCWGC 6 cut(s) 15, 18, 21, 695, 1162, 1279
Tsp45I GTSAC 1 cut(s) 155
TspDTI ATGAA 7 cut(s) 743, 886, 918, 1094, 1116, 1131, 1245
TspGWI ACGGA 1 cut(s) 357
TspRI CASTG 2 cut(s) 166, 886
Tth111I GACNNNGTC 1 cut(s) 167
VneI GTGCAC 1 cut(s) 877
VpaK11BI GGWCC 1 cut(s) 1020
XceI RCATGY 2 cut(s) 45, 1270
XmiI GTMKAC 2 cut(s) 413, 714
XspI CTAG 6 cut(s) 555, 681, 699, 911, 1236, 1305
Zsp2I ATGCAT 2 cut(s) 1079, 1268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.