Belongs to the DEAD box helicase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G45810 AT3G61240 AT3G61240 AT4G00660 AT4G00660 |
| fragaria_vesca | FvH4_7g13810 FvH4_7g13810 FvH4_7g13810 FvH4_7g13810 FvH4_7g13810 FvH4_7g13810 |
| malus_domestica | MD01G1054200.v1.1 MD07G1141100.v1.1 |
| prunus_persica | Prupe.2G163800_v2.0.a1 |
| pyrus_communis | pycom01g07950 pycom07g13890 |
| rosa_chinensis | RchiOBHm_Chr1g0353991 |
| rosa_laevigata | RLG00000028238 |
| rosa_multiflora | Rmu_sc0001763.1_g000011 |
| rosa_roxburghii | Rroxscaffold_4G00301390 |
| rosa_rugosa | Rorug01G0239700 |
| rosa_samantha | Rh1AG251200 Rh1BG222800 Rh1CG235400 Rh1DG249700 |
| rosa_wichuraiana | Rw1G021910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1327 |
| Acc65I | GGTACC | 1 cut(s) | 686 |
| AccB1I | GGYRCC | 2 cut(s) | 527, 686 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 670 |
| AccII | CGCG | 3 cut(s) | 126, 604, 1119 |
| AccIII | TCCGGA | 1 cut(s) | 957 |
| AciI | CCGC | 5 cut(s) | 126, 347, 684, 912, 1222 |
| AclWI | GGATC | 3 cut(s) | 771, 954, 993 |
| AcsI | RAATTY | 3 cut(s) | 374, 845, 1387 |
| AcuI | CTGAAG | 1 cut(s) | 602 |
| AcyI | GRCGYC | 1 cut(s) | 205 |
| AdeI | CACNNNGTG | 2 cut(s) | 32, 1345 |
| AfaI | GTAC | 2 cut(s) | 514, 688 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 35, 670, 1378 |
| AgsI | TTSAA | 8 cut(s) | 122, 452, 581, 658, 793, 1190, 1283, 1414 |
| AjnI | CCWGG | 3 cut(s) | 217, 663, 748 |
| AlwI | GGATC | 3 cut(s) | 771, 954, 993 |
| Ama87I | CYCGRG | 2 cut(s) | 548, 1266 |
| Aor13HI | TCCGGA | 1 cut(s) | 957 |
| AoxI | GGCC | 2 cut(s) | 612, 822 |
| ApeKI | GCWGC | 5 cut(s) | 88, 184, 187, 276, 1075 |
| ApoI | RAATTY | 3 cut(s) | 374, 845, 1387 |
| Asp718I | GGTACC | 1 cut(s) | 686 |
| AspA2I | CCTAGG | 1 cut(s) | 1316 |
| AspLEI | GCGC | 1 cut(s) | 55 |
| AspS9I | GGNCC | 3 cut(s) | 613, 1405, 1443 |
| AsuC2I | CCSGG | 1 cut(s) | 30 |
| AsuHPI | GGTGA | 1 cut(s) | 667 |
| AsuII | TTCGAA | 1 cut(s) | 378 |
| AsuNHI | GCTAGC | 1 cut(s) | 272 |
| AvaI | CYCGRG | 2 cut(s) | 548, 1266 |
| AvaII | GGWCC | 2 cut(s) | 1405, 1443 |
| AvrII | CCTAGG | 1 cut(s) | 1316 |
| BanI | GGYRCC | 2 cut(s) | 527, 686 |
| BauI | CACGAG | 1 cut(s) | 1214 |
| BbvCI | CCTCAGC | 2 cut(s) | 144, 210 |
| BbvI | GCAGC | 5 cut(s) | 100, 196, 199, 288, 1062 |
| BccI | CCATC | 2 cut(s) | 448, 1177 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1225, 1259 |
| BciT130I | CCWGG | 3 cut(s) | 219, 665, 750 |
| BclI | TGATCA | 1 cut(s) | 1299 |
| BcnI | CCSGG | 1 cut(s) | 30 |
| BfaI | CTAG | 6 cut(s) | 228, 273, 498, 593, 860, 1317 |
| BfmI | CTRYAG | 1 cut(s) | 840 |
| BglII | AGATCT | 1 cut(s) | 400 |
| BisI | GCNGC | 5 cut(s) | 89, 185, 188, 277, 1076 |
| BlnI | CCTAGG | 1 cut(s) | 1316 |
| BlsI | GCNGC | 5 cut(s) | 90, 186, 189, 278, 1077 |
| Bme1390I | CCNGG | 4 cut(s) | 30, 219, 665, 750 |
| Bme18I | GGWCC | 2 cut(s) | 1405, 1443 |
| BmeT110I | CYCGRG | 2 cut(s) | 548, 1266 |
| BmgT120I | GGNCC | 3 cut(s) | 613, 1405, 1443 |
| BmiI | GGNNCC | 3 cut(s) | 529, 688, 1444 |
| BmrFI | CCNGG | 4 cut(s) | 30, 219, 665, 750 |
| BmsI | GCATC | 4 cut(s) | 141, 271, 739, 795 |
| BmtI | GCTAGC | 1 cut(s) | 276 |
| BpmI | CTGGAG | 1 cut(s) | 143 |
| Bpu10I | CCTNAGC | 2 cut(s) | 144, 210 |
| Bpu14I | TTCGAA | 1 cut(s) | 378 |
| BpuEI | CTTGAG | 1 cut(s) | 87 |
| BpuMI | CCSGG | 1 cut(s) | 30 |
| Bsa29I | ATCGAT | 2 cut(s) | 1091, 1473 |
| BsaBI | GATNNNNATC | 2 cut(s) | 72, 951 |
| BsaHI | GRCGYC | 1 cut(s) | 205 |
| BsaJI | CCNNGG | 2 cut(s) | 1316, 1372 |
| BsaWI | WCCGGW | 1 cut(s) | 957 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 35, 670, 1378 |
| Bse1I | ACTGG | 6 cut(s) | 302, 484, 529, 542, 685, 690 |
| Bse3DI | GCAATG | 1 cut(s) | 1231 |
| Bse8I | GATNNNNATC | 2 cut(s) | 72, 951 |
| BseAI | TCCGGA | 1 cut(s) | 957 |
| BseBI | CCWGG | 3 cut(s) | 219, 665, 750 |
| BseCI | ATCGAT | 2 cut(s) | 1091, 1473 |
| BseDI | CCNNGG | 2 cut(s) | 1316, 1372 |
| BseGI | GGATG | 2 cut(s) | 355, 823 |
| BseJI | GATNNNNATC | 2 cut(s) | 72, 951 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 35, 670, 1378 |
| BseMI | GCAATG | 1 cut(s) | 1231 |
| BseMII | CTCAG | 6 cut(s) | 149, 158, 224, 686, 1317, 1419 |
| BseNI | ACTGG | 6 cut(s) | 302, 484, 529, 542, 685, 690 |
| BseXI | GCAGC | 5 cut(s) | 100, 196, 199, 288, 1062 |
| BseYI | CCCAGC | 1 cut(s) | 261 |
| Bsh1236I | CGCG | 3 cut(s) | 126, 604, 1119 |
| BshFI | GGCC | 2 cut(s) | 614, 824 |
| BshNI | GGYRCC | 2 cut(s) | 527, 686 |
| BshVI | ATCGAT | 2 cut(s) | 1091, 1473 |
| BsiHKCI | CYCGRG | 2 cut(s) | 548, 1266 |
| BsiSI | CCGG | 2 cut(s) | 29, 958 |
| BslFI | GGGAC | 1 cut(s) | 1456 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 35, 670, 1378 |
| BsmFI | GGGAC | 1 cut(s) | 1456 |
| BsmI | GAATGC | 2 cut(s) | 462, 537 |
| BsnI | GGCC | 2 cut(s) | 614, 824 |
| BsoBI | CYCGRG | 2 cut(s) | 548, 1266 |
| Bsp119I | TTCGAA | 1 cut(s) | 378 |
| Bsp13I | TCCGGA | 1 cut(s) | 957 |
| Bsp143I | GATC | 9 cut(s) | 106, 400, 763, 946, 985, 1255, 1299, 1352, 1474 |
| BspACI | CCGC | 5 cut(s) | 126, 347, 684, 912, 1222 |
| BspANI | GGCC | 2 cut(s) | 614, 824 |
| BspCNI | CTCAG | 6 cut(s) | 148, 157, 223, 687, 1318, 1420 |
| BspDI | ATCGAT | 2 cut(s) | 1091, 1473 |
| BspEI | TCCGGA | 1 cut(s) | 957 |
| BspFNI | CGCG | 3 cut(s) | 126, 604, 1119 |
| BspLI | GGNNCC | 3 cut(s) | 529, 688, 1444 |
| BspMAI | CTGCAG | 1 cut(s) | 844 |
| BspOI | GCTAGC | 1 cut(s) | 276 |
| BspPI | GGATC | 3 cut(s) | 771, 954, 993 |
| BspT104I | TTCGAA | 1 cut(s) | 378 |
| BspT107I | GGYRCC | 2 cut(s) | 527, 686 |
| BsrDI | GCAATG | 1 cut(s) | 1231 |
| BsrI | ACTGG | 6 cut(s) | 302, 484, 529, 542, 685, 690 |
| BssECI | CCNNGG | 2 cut(s) | 1316, 1372 |
| BssMI | GATC | 9 cut(s) | 106, 400, 763, 946, 985, 1255, 1299, 1352, 1474 |
| BssNI | GRCGYC | 1 cut(s) | 205 |
| BssSI | CACGAG | 1 cut(s) | 1214 |
| BssT1I | CCWWGG | 2 cut(s) | 1316, 1372 |
| Bst2BI | CACGAG | 1 cut(s) | 1214 |
| Bst2UI | CCWGG | 3 cut(s) | 219, 665, 750 |
| Bst4CI | ACNGT | 8 cut(s) | 195, 512, 800, 876, 931, 1362, 1409, 1490 |
| Bst6I | CTCTTC | 1 cut(s) | 450 |
| BstACI | GRCGYC | 1 cut(s) | 205 |
| BstBI | TTCGAA | 1 cut(s) | 378 |
| BstC8I | GCNNGC | 3 cut(s) | 274, 612, 1234 |
| BstDEI | CTNAG | 8 cut(s) | 135, 144, 210, 695, 1071, 1134, 1326, 1428 |
| BstEII | GGTNACC | 1 cut(s) | 673 |
| BstF5I | GGATG | 2 cut(s) | 355, 823 |
| BstFNI | CGCG | 3 cut(s) | 126, 604, 1119 |
| BstHHI | GCGC | 1 cut(s) | 55 |
| BstKTI | GATC | 9 cut(s) | 109, 403, 766, 949, 988, 1258, 1302, 1355, 1477 |
| BstMBI | GATC | 9 cut(s) | 106, 400, 763, 946, 985, 1255, 1299, 1352, 1474 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 160, 233 |
| BstNI | CCWGG | 3 cut(s) | 219, 665, 750 |
| BstPI | GGTNACC | 1 cut(s) | 673 |
| BstSCI | CCNGG | 4 cut(s) | 28, 217, 663, 748 |
| BstSFI | CTRYAG | 1 cut(s) | 840 |
| BstUI | CGCG | 3 cut(s) | 126, 604, 1119 |
| BstV1I | GCAGC | 5 cut(s) | 100, 196, 199, 288, 1062 |
| BstX2I | RGATCY | 2 cut(s) | 400, 763 |
| BstYI | RGATCY | 2 cut(s) | 400, 763 |
| Bsu15I | ATCGAT | 2 cut(s) | 1091, 1473 |
| BsuRI | GGCC | 2 cut(s) | 614, 824 |
| BsuTUI | ATCGAT | 2 cut(s) | 1091, 1473 |
| BtgZI | GCGATG | 2 cut(s) | 294, 818 |
| BtsCI | GGATG | 2 cut(s) | 355, 823 |
| BtsI | GCAGTG | 1 cut(s) | 1048 |
| BtsIMutI | CAGTG | 5 cut(s) | 200, 678, 927, 1048, 1251 |
| Cac8I | GCNNGC | 3 cut(s) | 274, 612, 1234 |
| CfoI | GCGC | 1 cut(s) | 55 |
| Cfr13I | GGNCC | 3 cut(s) | 613, 1405, 1443 |
| ClaI | ATCGAT | 2 cut(s) | 1091, 1473 |
| CseI | GACGC | 1 cut(s) | 213 |
| Csp6I | GTAC | 2 cut(s) | 513, 687 |
| CviAII | CATG | 4 cut(s) | 586, 982, 1161, 1175 |
| CviQI | GTAC | 2 cut(s) | 513, 687 |
| DdeI | CTNAG | 8 cut(s) | 135, 144, 210, 695, 1071, 1134, 1326, 1428 |
| DpnI | GATC | 9 cut(s) | 108, 402, 765, 948, 987, 1257, 1301, 1354, 1476 |
| DpnII | GATC | 9 cut(s) | 106, 400, 763, 946, 985, 1255, 1299, 1352, 1474 |
| DraIII | CACNNNGTG | 2 cut(s) | 32, 1345 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1327 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1327 |
| Eam1104I | CTCTTC | 1 cut(s) | 450 |
| EarI | CTCTTC | 1 cut(s) | 450 |
| EciI | GGCGGA | 1 cut(s) | 901 |
| Eco130I | CCWWGG | 2 cut(s) | 1316, 1372 |
| Eco32I | GATATC | 1 cut(s) | 23 |
| Eco47I | GGWCC | 2 cut(s) | 1405, 1443 |
| Eco57I | CTGAAG | 1 cut(s) | 602 |
| Eco88I | CYCGRG | 2 cut(s) | 548, 1266 |
| Eco91I | GGTNACC | 1 cut(s) | 673 |
| EcoO65I | GGTNACC | 1 cut(s) | 673 |
| EcoRI | GAATTC | 2 cut(s) | 374, 845 |
| EcoRII | CCWGG | 3 cut(s) | 217, 663, 748 |
| EcoRV | GATATC | 1 cut(s) | 23 |
| EcoT14I | CCWWGG | 2 cut(s) | 1316, 1372 |
| ErhI | CCWWGG | 2 cut(s) | 1316, 1372 |
| FaeI | CATG | 4 cut(s) | 589, 985, 1164, 1178 |
| FaqI | GGGAC | 1 cut(s) | 1456 |
| FatI | CATG | 4 cut(s) | 585, 981, 1160, 1174 |
| FbaI | TGATCA | 1 cut(s) | 1299 |
| Fnu4HI | GCNGC | 5 cut(s) | 89, 185, 188, 277, 1076 |
| FokI | GGATG | 2 cut(s) | 362, 830 |
| Fsp4HI | GCNGC | 5 cut(s) | 89, 185, 188, 277, 1076 |
| FspBI | CTAG | 6 cut(s) | 228, 273, 498, 593, 860, 1317 |
| GlaI | GCGC | 1 cut(s) | 54 |
| GluI | GCNGC | 5 cut(s) | 89, 185, 188, 277, 1076 |
| GsaI | CCCAGC | 1 cut(s) | 265 |
| GsuI | CTGGAG | 1 cut(s) | 143 |
| HaeIII | GGCC | 2 cut(s) | 614, 824 |
| HapII | CCGG | 2 cut(s) | 29, 958 |
| HgaI | GACGC | 1 cut(s) | 213 |
| HhaI | GCGC | 1 cut(s) | 55 |
| Hin1I | GRCGYC | 1 cut(s) | 205 |
| Hin1II | CATG | 4 cut(s) | 589, 985, 1164, 1178 |
| Hin6I | GCGC | 1 cut(s) | 53 |
| HinP1I | GCGC | 1 cut(s) | 53 |
| HindIII | AAGCTT | 1 cut(s) | 830 |
| HinfI | GANTC | 4 cut(s) | 61, 589, 1240, 1328 |
| HpaII | CCGG | 2 cut(s) | 29, 958 |
| HphI | GGTGA | 1 cut(s) | 667 |
| Hpy166II | GTNNAC | 2 cut(s) | 1048, 1263 |
| Hpy188I | TCNGA | 8 cut(s) | 60, 138, 342, 393, 621, 696, 1327, 1425 |
| Hpy8I | GTNNAC | 2 cut(s) | 1048, 1263 |
| HpyAV | CCTTC | 7 cut(s) | 295, 418, 541, 626, 864, 1036, 1473 |
| HpyCH4III | ACNGT | 8 cut(s) | 195, 512, 800, 876, 931, 1362, 1409, 1490 |
| HpyCH4IV | ACGT | 1 cut(s) | 308 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 160, 233 |
| HpyF3I | CTNAG | 8 cut(s) | 135, 144, 210, 695, 1071, 1134, 1326, 1428 |
| HpySE526I | ACGT | 1 cut(s) | 308 |
| Hsp92I | GRCGYC | 1 cut(s) | 205 |
| Hsp92II | CATG | 4 cut(s) | 589, 985, 1164, 1178 |
| HspAI | GCGC | 1 cut(s) | 53 |
| Kpn2I | TCCGGA | 1 cut(s) | 957 |
| KpnI | GGTACC | 1 cut(s) | 690 |
| Ksp22I | TGATCA | 1 cut(s) | 1299 |
| Kzo9I | GATC | 9 cut(s) | 106, 400, 763, 946, 985, 1255, 1299, 1352, 1474 |
| LmnI | GCTCC | 2 cut(s) | 640, 1123 |
| Lsp1109I | GCAGC | 5 cut(s) | 100, 196, 199, 288, 1062 |
| LweI | GCATC | 4 cut(s) | 141, 271, 739, 795 |
| MaeI | CTAG | 6 cut(s) | 228, 273, 498, 593, 860, 1317 |
| MaeII | ACGT | 1 cut(s) | 308 |
| MaeIII | GTNAC | 6 cut(s) | 230, 352, 673, 925, 1006, 1393 |
| MalI | GATC | 9 cut(s) | 108, 402, 765, 948, 987, 1257, 1301, 1354, 1476 |
| MboI | GATC | 9 cut(s) | 106, 400, 763, 946, 985, 1255, 1299, 1352, 1474 |
| MboII | GAAGA | 5 cut(s) | 30, 392, 467, 765, 1043 |
| MfeI | CAATTG | 1 cut(s) | 468 |
| MflI | RGATCY | 2 cut(s) | 400, 763 |
| MluCI | AATT | 9 cut(s) | 374, 447, 468, 555, 845, 866, 1272, 1387, 1458 |
| MlyI | GAGTC | 1 cut(s) | 1337 |
| MmeI | TCCRAC | 4 cut(s) | 16, 623, 721, 874 |
| MroI | TCCGGA | 1 cut(s) | 957 |
| MseI | TTAA | 5 cut(s) | 311, 407, 476, 933, 942 |
| MslI | CAYNNNNRTG | 1 cut(s) | 998 |
| MspA1I | CMGCKG | 1 cut(s) | 347 |
| MspI | CCGG | 2 cut(s) | 29, 958 |
| MspR9I | CCNGG | 4 cut(s) | 30, 219, 665, 750 |
| MunI | CAATTG | 1 cut(s) | 468 |
| Mva1269I | GAATGC | 2 cut(s) | 462, 537 |
| MvaI | CCWGG | 3 cut(s) | 219, 665, 750 |
| MvnI | CGCG | 3 cut(s) | 126, 604, 1119 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 160, 233 |
| NciI | CCSGG | 1 cut(s) | 30 |
| NdeII | GATC | 9 cut(s) | 106, 400, 763, 946, 985, 1255, 1299, 1352, 1474 |
| NheI | GCTAGC | 1 cut(s) | 272 |
| NlaIII | CATG | 4 cut(s) | 589, 985, 1164, 1178 |
| NlaIV | GGNNCC | 3 cut(s) | 529, 688, 1444 |
| NmuCI | GTSAC | 4 cut(s) | 352, 673, 925, 1006 |
| NspV | TTCGAA | 1 cut(s) | 378 |
| PaeR7I | CTCGAG | 2 cut(s) | 548, 1266 |
| PctI | GAATGC | 2 cut(s) | 462, 537 |
| PfeI | GAWTC | 3 cut(s) | 61, 589, 1240 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 670 |
| PfoI | TCCNGGA | 2 cut(s) | 217, 748 |
| PkrI | GCNGC | 5 cut(s) | 90, 186, 189, 278, 1077 |
| PleI | GAGTC | 1 cut(s) | 1336 |
| PpsI | GAGTC | 1 cut(s) | 1336 |
| Psp6I | CCWGG | 3 cut(s) | 217, 663, 748 |
| PspEI | GGTNACC | 1 cut(s) | 673 |
| PspFI | CCCAGC | 1 cut(s) | 261 |
| PspGI | CCWGG | 3 cut(s) | 217, 663, 748 |
| PspN4I | GGNNCC | 3 cut(s) | 529, 688, 1444 |
| PspPI | GGNCC | 3 cut(s) | 613, 1405, 1443 |
| PspXI | VCTCGAGB | 1 cut(s) | 1266 |
| PstI | CTGCAG | 1 cut(s) | 844 |
| PsuI | RGATCY | 2 cut(s) | 400, 763 |
| RsaI | GTAC | 2 cut(s) | 514, 688 |
| RsaNI | GTAC | 2 cut(s) | 513, 687 |
| RseI | CAYNNNNRTG | 1 cut(s) | 998 |
| SaqAI | TTAA | 5 cut(s) | 311, 407, 476, 933, 942 |
| SatI | GCNGC | 5 cut(s) | 89, 185, 188, 277, 1076 |
| Sau3AI | GATC | 9 cut(s) | 106, 400, 763, 946, 985, 1255, 1299, 1352, 1474 |
| Sau96I | GGNCC | 3 cut(s) | 613, 1405, 1443 |
| SchI | GAGTC | 1 cut(s) | 1337 |
| ScrFI | CCNGG | 4 cut(s) | 30, 219, 665, 750 |
| SfaNI | GCATC | 4 cut(s) | 141, 271, 739, 795 |
| SfcI | CTRYAG | 1 cut(s) | 840 |
| Sfr274I | CTCGAG | 2 cut(s) | 548, 1266 |
| SfuI | TTCGAA | 1 cut(s) | 378 |
| SinI | GGWCC | 2 cut(s) | 1405, 1443 |
| SlaI | CTCGAG | 2 cut(s) | 548, 1266 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 998 |
| SmlI | CTYRAG | 3 cut(s) | 102, 548, 1266 |
| SmoI | CTYRAG | 3 cut(s) | 102, 548, 1266 |
| Sse9I | AATT | 9 cut(s) | 374, 447, 468, 555, 845, 866, 1272, 1387, 1458 |
| SsiI | CCGC | 5 cut(s) | 126, 347, 684, 912, 1222 |
| SspI | AATATT | 3 cut(s) | 653, 759, 1016 |
| SspMI | CTAG | 6 cut(s) | 228, 273, 498, 593, 860, 1317 |
| StyD4I | CCNGG | 4 cut(s) | 28, 217, 663, 748 |
| StyI | CCWWGG | 2 cut(s) | 1316, 1372 |
| TaaI | ACNGT | 8 cut(s) | 195, 512, 800, 876, 931, 1362, 1409, 1490 |
| TaiI | ACGT | 1 cut(s) | 311 |
| TaqI | TCGA | 8 cut(s) | 378, 549, 949, 1029, 1091, 1267, 1351, 1473 |
| TaqII | GACCGA | 1 cut(s) | 1460 |
| TasI | AATT | 9 cut(s) | 374, 447, 468, 555, 845, 866, 1272, 1387, 1458 |
| TfiI | GAWTC | 3 cut(s) | 61, 589, 1240 |
| Tru1I | TTAA | 5 cut(s) | 311, 407, 476, 933, 942 |
| Tru9I | TTAA | 5 cut(s) | 311, 407, 476, 933, 942 |
| TscAI | CASTG | 5 cut(s) | 200, 685, 934, 1055, 1258 |
| TseFI | GTSAC | 4 cut(s) | 352, 673, 925, 1006 |
| TseI | GCWGC | 5 cut(s) | 88, 184, 187, 276, 1075 |
| Tsp45I | GTSAC | 4 cut(s) | 352, 673, 925, 1006 |
| TspDTI | ATGAA | 4 cut(s) | 17, 387, 1149, 1163 |
| TspRI | CASTG | 5 cut(s) | 200, 685, 934, 1055, 1258 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 670 |
| VpaK11BI | GGWCC | 2 cut(s) | 1405, 1443 |
| XapI | RAATTY | 3 cut(s) | 374, 845, 1387 |
| XbaI | TCTAGA | 1 cut(s) | 859 |
| XhoI | CTCGAG | 2 cut(s) | 548, 1266 |
| XmaJI | CCTAGG | 1 cut(s) | 1316 |
| XspI | CTAG | 6 cut(s) | 228, 273, 498, 593, 860, 1317 |