Belongs to the DEAD box helicase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G45810 AT3G61240 AT3G61240 AT4G00660 AT4G00660 |
| fragaria_vesca | FvH4_7g13810 FvH4_7g13810 FvH4_7g13810 FvH4_7g13810 FvH4_7g13810 FvH4_7g13810 |
| malus_domestica | MD01G1054200.v1.1 MD07G1141100.v1.1 |
| prunus_persica | Prupe.2G163800_v2.0.a1 |
| pyrus_communis | pycom01g07950 pycom07g13890 |
| rosa_chinensis | RchiOBHm_Chr1g0353991 |
| rosa_laevigata | RLG00000028238 |
| rosa_multiflora | Rmu_sc0001763.1_g000011 |
| rosa_roxburghii | Rroxscaffold_4G00301390 |
| rosa_rugosa | Rorug01G0239700 |
| rosa_samantha | Rh1AG251200 Rh1BG222800 Rh1CG235400 Rh1DG249700 |
| rosa_wichuraiana | Rw1G021910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 268 |
| Acc65I | GGTACC | 2 cut(s) | 21, 689 |
| AccB1I | GGYRCC | 2 cut(s) | 21, 689 |
| AccI | GTMKAC | 1 cut(s) | 282 |
| AccII | CGCG | 1 cut(s) | 609 |
| AciI | CCGC | 4 cut(s) | 89, 92, 877, 1411 |
| AclWI | GGATC | 2 cut(s) | 41, 868 |
| AcoI | YGGCCR | 2 cut(s) | 240, 1134 |
| AcsI | RAATTY | 6 cut(s) | 417, 663, 759, 900, 1390, 1461 |
| AcuI | CTGAAG | 1 cut(s) | 843 |
| AfaI | GTAC | 6 cut(s) | 23, 111, 149, 226, 691, 1255 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 35, 454, 550 |
| AgsI | TTSAA | 8 cut(s) | 623, 668, 796, 854, 946, 1082, 1286, 1417 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1046 |
| AjnI | CCWGG | 1 cut(s) | 751 |
| Alw26I | GTCTC | 3 cut(s) | 87, 1033, 1325 |
| AlwI | GGATC | 2 cut(s) | 41, 868 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 329 |
| Ama87I | CYCGRG | 1 cut(s) | 286 |
| AoxI | GGCC | 3 cut(s) | 240, 825, 1134 |
| ApeKI | GCWGC | 8 cut(s) | 163, 175, 178, 181, 406, 530, 868, 1189 |
| ApoI | RAATTY | 6 cut(s) | 417, 663, 759, 900, 1390, 1461 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 431 |
| Asp718I | GGTACC | 2 cut(s) | 21, 689 |
| AspS9I | GGNCC | 1 cut(s) | 1446 |
| AsuC2I | CCSGG | 2 cut(s) | 30, 845 |
| AsuHPI | GGTGA | 2 cut(s) | 131, 1390 |
| AsuII | TTCGAA | 1 cut(s) | 435 |
| AvaI | CYCGRG | 1 cut(s) | 286 |
| AvaII | GGWCC | 1 cut(s) | 1446 |
| BalI | TGGCCA | 1 cut(s) | 1136 |
| BanI | GGYRCC | 2 cut(s) | 21, 689 |
| BbsI | GAAGAC | 2 cut(s) | 266, 1413 |
| BbvI | GCAGC | 8 cut(s) | 175, 187, 190, 193, 393, 517, 880, 1176 |
| BccI | CCATC | 4 cut(s) | 141, 406, 451, 1206 |
| BceAI | ACGGC | 1 cut(s) | 227 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1181, 1215 |
| BciT130I | CCWGG | 1 cut(s) | 753 |
| BciVI | GTATCC | 1 cut(s) | 476 |
| BclI | TGATCA | 2 cut(s) | 562, 1395 |
| BcnI | CCSGG | 2 cut(s) | 30, 845 |
| BcoDI | GTCTC | 3 cut(s) | 87, 1033, 1325 |
| BfaI | CTAG | 2 cut(s) | 501, 647 |
| BfuI | GTATCC | 1 cut(s) | 476 |
| BglII | AGATCT | 2 cut(s) | 766, 1258 |
| BisI | GCNGC | 9 cut(s) | 92, 164, 176, 179, 182, 407, 531, 869, 1190 |
| BlsI | GCNGC | 9 cut(s) | 93, 165, 177, 180, 183, 408, 532, 870, 1191 |
| BmcAI | AGTACT | 1 cut(s) | 149 |
| Bme1390I | CCNGG | 3 cut(s) | 30, 753, 845 |
| Bme18I | GGWCC | 1 cut(s) | 1446 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1046 |
| BmeT110I | CYCGRG | 1 cut(s) | 286 |
| BmgT120I | GGNCC | 1 cut(s) | 1446 |
| BmiI | GGNNCC | 4 cut(s) | 23, 119, 691, 1447 |
| BmrFI | CCNGG | 3 cut(s) | 30, 753, 845 |
| BmsI | GCATC | 5 cut(s) | 103, 175, 549, 798, 1176 |
| BpiI | GAAGAC | 2 cut(s) | 266, 1413 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 10, 42 |
| Bpu10I | CCTNAGC | 1 cut(s) | 200 |
| Bpu14I | TTCGAA | 1 cut(s) | 435 |
| BpuMI | CCSGG | 2 cut(s) | 30, 845 |
| Bsa29I | ATCGAT | 1 cut(s) | 1476 |
| BsaBI | GATNNNNATC | 1 cut(s) | 954 |
| BsaJI | CCNNGG | 3 cut(s) | 29, 843, 1375 |
| BsaWI | WCCGGW | 1 cut(s) | 683 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 37, 67, 214, 244 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 35, 454, 550 |
| Bse118I | RCCGGY | 1 cut(s) | 1494 |
| Bse1I | ACTGG | 3 cut(s) | 228, 487, 728 |
| Bse8I | GATNNNNATC | 1 cut(s) | 954 |
| BseBI | CCWGG | 1 cut(s) | 753 |
| BseCI | ATCGAT | 1 cut(s) | 1476 |
| BseDI | CCNNGG | 3 cut(s) | 29, 843, 1375 |
| BseGI | GGATG | 6 cut(s) | 358, 443, 540, 709, 826, 994 |
| BseJI | GATNNNNATC | 1 cut(s) | 954 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 35, 454, 550 |
| BseMII | CTCAG | 2 cut(s) | 214, 1341 |
| BseNI | ACTGG | 3 cut(s) | 228, 487, 728 |
| BseRI | GAGGAG | 1 cut(s) | 1049 |
| BseX3I | CGGCCG | 1 cut(s) | 240 |
| BseXI | GCAGC | 8 cut(s) | 175, 187, 190, 193, 393, 517, 880, 1176 |
| BseYI | CCCAGC | 1 cut(s) | 41 |
| BsgI | GTGCAG | 1 cut(s) | 287 |
| Bsh1236I | CGCG | 1 cut(s) | 609 |
| Bsh1285I | CGRYCG | 2 cut(s) | 89, 243 |
| BshFI | GGCC | 3 cut(s) | 242, 827, 1136 |
| BshNI | GGYRCC | 2 cut(s) | 21, 689 |
| BshVI | ATCGAT | 1 cut(s) | 1476 |
| BsiEI | CGRYCG | 2 cut(s) | 89, 243 |
| BsiHKCI | CYCGRG | 1 cut(s) | 286 |
| BsiSI | CCGG | 4 cut(s) | 29, 684, 845, 1495 |
| BslFI | GGGAC | 2 cut(s) | 826, 1459 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 35, 454, 550 |
| BsmAI | GTCTC | 3 cut(s) | 87, 1033, 1325 |
| BsmFI | GGGAC | 2 cut(s) | 826, 1459 |
| BsmI | GAATGC | 1 cut(s) | 67 |
| BsnI | GGCC | 3 cut(s) | 242, 827, 1136 |
| BsoBI | CYCGRG | 1 cut(s) | 286 |
| Bsp119I | TTCGAA | 1 cut(s) | 435 |
| Bsp1407I | TGTACA | 2 cut(s) | 109, 1253 |
| Bsp143I | GATC | 8 cut(s) | 33, 562, 766, 873, 1258, 1355, 1395, 1477 |
| Bsp68I | TCGCGA | 1 cut(s) | 609 |
| BspACI | CCGC | 4 cut(s) | 89, 92, 877, 1411 |
| BspANI | GGCC | 3 cut(s) | 242, 827, 1136 |
| BspCNI | CTCAG | 2 cut(s) | 213, 1340 |
| BspDI | ATCGAT | 1 cut(s) | 1476 |
| BspFNI | CGCG | 1 cut(s) | 609 |
| BspHI | TCATGA | 1 cut(s) | 1216 |
| BspLI | GGNNCC | 4 cut(s) | 23, 119, 691, 1447 |
| BspPI | GGATC | 2 cut(s) | 41, 868 |
| BspQI | GCTCTTC | 1 cut(s) | 624 |
| BspT104I | TTCGAA | 1 cut(s) | 435 |
| BspT107I | GGYRCC | 2 cut(s) | 21, 689 |
| BsrFI | RCCGGY | 1 cut(s) | 1494 |
| BsrGI | TGTACA | 2 cut(s) | 109, 1253 |
| BsrI | ACTGG | 3 cut(s) | 228, 487, 728 |
| BssAI | RCCGGY | 1 cut(s) | 1494 |
| BssECI | CCNNGG | 3 cut(s) | 29, 843, 1375 |
| BssMI | GATC | 8 cut(s) | 33, 562, 766, 873, 1258, 1355, 1395, 1477 |
| BssT1I | CCWWGG | 1 cut(s) | 1375 |
| Bst2UI | CCWGG | 1 cut(s) | 753 |
| Bst4CI | ACNGT | 5 cut(s) | 8, 105, 195, 265, 934 |
| Bst6I | CTCTTC | 1 cut(s) | 624 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 71 |
| BstAUI | TGTACA | 2 cut(s) | 109, 1253 |
| BstBI | TTCGAA | 1 cut(s) | 435 |
| BstC8I | GCNNGC | 1 cut(s) | 1237 |
| BstDEI | CTNAG | 2 cut(s) | 200, 1327 |
| BstF5I | GGATG | 6 cut(s) | 358, 443, 540, 709, 826, 994 |
| BstFNI | CGCG | 1 cut(s) | 609 |
| BstKTI | GATC | 8 cut(s) | 36, 565, 769, 876, 1261, 1358, 1398, 1480 |
| BstMAI | GTCTC | 3 cut(s) | 87, 1033, 1325 |
| BstMBI | GATC | 8 cut(s) | 33, 562, 766, 873, 1258, 1355, 1395, 1477 |
| BstMCI | CGRYCG | 2 cut(s) | 89, 243 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 71, 97, 163, 172, 181, 239, 652 |
| BstNI | CCWGG | 1 cut(s) | 753 |
| BstNSI | RCATGY | 1 cut(s) | 1239 |
| BstSCI | CCNGG | 3 cut(s) | 28, 751, 843 |
| BstUI | CGCG | 1 cut(s) | 609 |
| BstV1I | GCAGC | 8 cut(s) | 175, 187, 190, 193, 393, 517, 880, 1176 |
| BstV2I | GAAGAC | 2 cut(s) | 266, 1413 |
| BstX2I | RGATCY | 2 cut(s) | 766, 1258 |
| BstYI | RGATCY | 2 cut(s) | 766, 1258 |
| BstZI | CGGCCG | 1 cut(s) | 240 |
| Bsu15I | ATCGAT | 1 cut(s) | 1476 |
| BsuI | GTATCC | 1 cut(s) | 476 |
| BsuRI | GGCC | 3 cut(s) | 242, 827, 1136 |
| BsuTUI | ATCGAT | 1 cut(s) | 1476 |
| BtsCI | GGATG | 6 cut(s) | 358, 443, 540, 709, 826, 994 |
| BtsI | GCAGTG | 1 cut(s) | 1051 |
| BtsIMutI | CAGTG | 4 cut(s) | 200, 235, 270, 1051 |
| BtuMI | TCGCGA | 1 cut(s) | 609 |
| Cac8I | GCNNGC | 1 cut(s) | 1237 |
| CaiI | CAGNNNCTG | 1 cut(s) | 329 |
| CciI | TCATGA | 1 cut(s) | 1216 |
| Cfr10I | RCCGGY | 1 cut(s) | 1494 |
| Cfr13I | GGNCC | 1 cut(s) | 1446 |
| ClaI | ATCGAT | 1 cut(s) | 1476 |
| Csp6I | GTAC | 6 cut(s) | 22, 110, 148, 225, 690, 1254 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 176, 211 |
| CviAII | CATG | 6 cut(s) | 58, 296, 712, 1178, 1217, 1236 |
| CviQI | GTAC | 6 cut(s) | 22, 110, 148, 225, 690, 1254 |
| DdeI | CTNAG | 2 cut(s) | 200, 1327 |
| DpnI | GATC | 8 cut(s) | 35, 564, 768, 875, 1260, 1357, 1397, 1479 |
| DpnII | GATC | 8 cut(s) | 33, 562, 766, 873, 1258, 1355, 1395, 1477 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 268 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1046 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 268 |
| EaeI | YGGCCR | 2 cut(s) | 240, 1134 |
| EagI | CGGCCG | 1 cut(s) | 240 |
| Eam1104I | CTCTTC | 1 cut(s) | 624 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1046 |
| EarI | CTCTTC | 1 cut(s) | 624 |
| EclXI | CGGCCG | 1 cut(s) | 240 |
| Eco130I | CCWWGG | 1 cut(s) | 1375 |
| Eco32I | GATATC | 2 cut(s) | 709, 956 |
| Eco47I | GGWCC | 1 cut(s) | 1446 |
| Eco52I | CGGCCG | 1 cut(s) | 240 |
| Eco57I | CTGAAG | 1 cut(s) | 843 |
| Eco88I | CYCGRG | 1 cut(s) | 286 |
| EcoRII | CCWGG | 1 cut(s) | 751 |
| EcoRV | GATATC | 2 cut(s) | 709, 956 |
| EcoT14I | CCWWGG | 1 cut(s) | 1375 |
| ErhI | CCWWGG | 1 cut(s) | 1375 |
| FaeI | CATG | 6 cut(s) | 61, 299, 715, 1181, 1220, 1239 |
| FaqI | GGGAC | 2 cut(s) | 826, 1459 |
| FatI | CATG | 6 cut(s) | 57, 295, 711, 1177, 1216, 1235 |
| FbaI | TGATCA | 2 cut(s) | 562, 1395 |
| FblI | GTMKAC | 1 cut(s) | 282 |
| Fnu4HI | GCNGC | 9 cut(s) | 92, 164, 176, 179, 182, 407, 531, 869, 1190 |
| FokI | GGATG | 6 cut(s) | 365, 430, 527, 716, 833, 1001 |
| Fsp4HI | GCNGC | 9 cut(s) | 92, 164, 176, 179, 182, 407, 531, 869, 1190 |
| FspBI | CTAG | 2 cut(s) | 501, 647 |
| GluI | GCNGC | 9 cut(s) | 92, 164, 176, 179, 182, 407, 531, 869, 1190 |
| GsaI | CCCAGC | 1 cut(s) | 45 |
| HaeIII | GGCC | 3 cut(s) | 242, 827, 1136 |
| HapII | CCGG | 4 cut(s) | 29, 684, 845, 1495 |
| Hin1II | CATG | 6 cut(s) | 61, 299, 715, 1181, 1220, 1239 |
| HincII | GTYRAC | 1 cut(s) | 283 |
| HindII | GTYRAC | 1 cut(s) | 283 |
| HindIII | AAGCTT | 2 cut(s) | 833, 1076 |
| HinfI | GANTC | 3 cut(s) | 236, 432, 1117 |
| HpaII | CCGG | 4 cut(s) | 29, 684, 845, 1495 |
| HphI | GGTGA | 2 cut(s) | 131, 1390 |
| Hpy166II | GTNNAC | 3 cut(s) | 283, 733, 1051 |
| Hpy188I | TCNGA | 6 cut(s) | 38, 274, 344, 396, 746, 1330 |
| Hpy188III | TCNNGA | 9 cut(s) | 84, 202, 256, 455, 566, 608, 793, 1217, 1359 |
| Hpy8I | GTNNAC | 3 cut(s) | 283, 733, 1051 |
| HpyAV | CCTTC | 5 cut(s) | 298, 421, 867, 897, 1356 |
| HpyCH4III | ACNGT | 5 cut(s) | 8, 105, 195, 265, 934 |
| HpyCH4IV | ACGT | 1 cut(s) | 400 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 71, 97, 163, 172, 181, 239, 652 |
| HpyF3I | CTNAG | 2 cut(s) | 200, 1327 |
| HpySE526I | ACGT | 1 cut(s) | 400 |
| Hsp92II | CATG | 6 cut(s) | 61, 299, 715, 1181, 1220, 1239 |
| KpnI | GGTACC | 2 cut(s) | 25, 693 |
| Ksp22I | TGATCA | 2 cut(s) | 562, 1395 |
| Kzo9I | GATC | 8 cut(s) | 33, 562, 766, 873, 1258, 1355, 1395, 1477 |
| LguI | GCTCTTC | 1 cut(s) | 624 |
| LmnI | GCTCC | 2 cut(s) | 38, 643 |
| Lsp1109I | GCAGC | 8 cut(s) | 175, 187, 190, 193, 393, 517, 880, 1176 |
| LweI | GCATC | 5 cut(s) | 103, 175, 549, 798, 1176 |
| MaeI | CTAG | 2 cut(s) | 501, 647 |
| MaeII | ACGT | 1 cut(s) | 400 |
| MaeIII | GTNAC | 5 cut(s) | 8, 355, 676, 928, 1202 |
| MalI | GATC | 8 cut(s) | 35, 564, 768, 875, 1260, 1357, 1397, 1479 |
| MboI | GATC | 8 cut(s) | 33, 562, 766, 873, 1258, 1355, 1395, 1477 |
| MboII | GAAGA | 6 cut(s) | 271, 470, 611, 768, 1331, 1418 |
| MfeI | CAATTG | 1 cut(s) | 471 |
| MflI | RGATCY | 2 cut(s) | 766, 1258 |
| MlsI | TGGCCA | 1 cut(s) | 1136 |
| MluNI | TGGCCA | 1 cut(s) | 1136 |
| MmeI | TCCRAC | 3 cut(s) | 252, 626, 724 |
| Mox20I | TGGCCA | 1 cut(s) | 1136 |
| MroXI | GAANNNNTTC | 1 cut(s) | 431 |
| MscI | TGGCCA | 1 cut(s) | 1136 |
| MseI | TTAA | 4 cut(s) | 314, 479, 698, 1305 |
| Msp20I | TGGCCA | 1 cut(s) | 1136 |
| MspA1I | CMGCKG | 2 cut(s) | 530, 871 |
| MspI | CCGG | 4 cut(s) | 29, 684, 845, 1495 |
| MspR9I | CCNGG | 3 cut(s) | 30, 753, 845 |
| MunI | CAATTG | 1 cut(s) | 471 |
| Mva1269I | GAATGC | 1 cut(s) | 67 |
| MvaI | CCWGG | 1 cut(s) | 753 |
| MvnI | CGCG | 1 cut(s) | 609 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 71, 97, 163, 172, 181, 239, 652 |
| NciI | CCSGG | 2 cut(s) | 30, 845 |
| NdeII | GATC | 8 cut(s) | 33, 562, 766, 873, 1258, 1355, 1395, 1477 |
| NlaIII | CATG | 6 cut(s) | 61, 299, 715, 1181, 1220, 1239 |
| NlaIV | GGNNCC | 4 cut(s) | 23, 119, 691, 1447 |
| NruI | TCGCGA | 1 cut(s) | 609 |
| NspI | RCATGY | 1 cut(s) | 1239 |
| NspV | TTCGAA | 1 cut(s) | 435 |
| PaeI | GCATGC | 1 cut(s) | 1239 |
| PagI | TCATGA | 1 cut(s) | 1216 |
| PciSI | GCTCTTC | 1 cut(s) | 624 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1029 |
| PctI | GAATGC | 1 cut(s) | 67 |
| PdmI | GAANNNNTTC | 1 cut(s) | 431 |
| PfeI | GAWTC | 3 cut(s) | 236, 432, 1117 |
| PfoI | TCCNGGA | 1 cut(s) | 751 |
| PkrI | GCNGC | 9 cut(s) | 93, 165, 177, 180, 183, 408, 532, 870, 1191 |
| Psp6I | CCWGG | 1 cut(s) | 751 |
| PspFI | CCCAGC | 1 cut(s) | 41 |
| PspGI | CCWGG | 1 cut(s) | 751 |
| PspN4I | GGNNCC | 4 cut(s) | 23, 119, 691, 1447 |
| PspPI | GGNCC | 1 cut(s) | 1446 |
| PstNI | CAGNNNCTG | 1 cut(s) | 329 |
| PsuI | RGATCY | 2 cut(s) | 766, 1258 |
| PvuII | CAGCTG | 2 cut(s) | 530, 871 |
| RruI | TCGCGA | 1 cut(s) | 609 |
| RsaI | GTAC | 6 cut(s) | 23, 111, 149, 226, 691, 1255 |
| RsaNI | GTAC | 6 cut(s) | 22, 110, 148, 225, 690, 1254 |
| SalI | GTCGAC | 1 cut(s) | 281 |
| SapI | GCTCTTC | 1 cut(s) | 624 |
| SaqAI | TTAA | 4 cut(s) | 314, 479, 698, 1305 |
| SatI | GCNGC | 9 cut(s) | 92, 164, 176, 179, 182, 407, 531, 869, 1190 |
| Sau3AI | GATC | 8 cut(s) | 33, 562, 766, 873, 1258, 1355, 1395, 1477 |
| Sau96I | GGNCC | 1 cut(s) | 1446 |
| ScaI | AGTACT | 1 cut(s) | 149 |
| ScrFI | CCNGG | 3 cut(s) | 30, 753, 845 |
| SfaNI | GCATC | 5 cut(s) | 103, 175, 549, 798, 1176 |
| SfuI | TTCGAA | 1 cut(s) | 435 |
| SinI | GGWCC | 1 cut(s) | 1446 |
| SphI | GCATGC | 1 cut(s) | 1239 |
| SsiI | CCGC | 4 cut(s) | 89, 92, 877, 1411 |
| SspI | AATATT | 1 cut(s) | 319 |
| SspMI | CTAG | 2 cut(s) | 501, 647 |
| StyD4I | CCNGG | 3 cut(s) | 28, 751, 843 |
| StyI | CCWWGG | 1 cut(s) | 1375 |
| TaaI | ACNGT | 5 cut(s) | 8, 105, 195, 265, 934 |
| TaiI | ACGT | 1 cut(s) | 403 |
| TaqI | TCGA | 8 cut(s) | 85, 255, 282, 435, 895, 1032, 1354, 1476 |
| TaqII | GACCGA | 1 cut(s) | 1463 |
| TatI | WGTACW | 3 cut(s) | 109, 147, 1253 |
| TauI | GCSGC | 1 cut(s) | 94 |
| TfiI | GAWTC | 3 cut(s) | 236, 432, 1117 |
| Tru1I | TTAA | 4 cut(s) | 314, 479, 698, 1305 |
| Tru9I | TTAA | 4 cut(s) | 314, 479, 698, 1305 |
| TscAI | CASTG | 4 cut(s) | 200, 235, 270, 1058 |
| TseI | GCWGC | 8 cut(s) | 163, 175, 178, 181, 406, 530, 868, 1189 |
| TspDTI | ATGAA | 4 cut(s) | 17, 74, 1205, 1419 |
| TspGWI | ACGGA | 2 cut(s) | 362, 1214 |
| TspRI | CASTG | 4 cut(s) | 200, 235, 270, 1058 |
| VpaK11BI | GGWCC | 1 cut(s) | 1446 |
| XapI | RAATTY | 6 cut(s) | 417, 663, 759, 900, 1390, 1461 |
| XceI | RCATGY | 1 cut(s) | 1239 |
| XmiI | GTMKAC | 1 cut(s) | 282 |
| XmnI | GAANNNNTTC | 1 cut(s) | 431 |
| XspI | CTAG | 2 cut(s) | 501, 647 |
| ZrmI | AGTACT | 1 cut(s) | 149 |