Belongs to the DEAD box helicase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G45810 AT3G61240 AT3G61240 AT4G00660 AT4G00660 |
| fragaria_vesca | FvH4_7g13810 FvH4_7g13810 FvH4_7g13810 FvH4_7g13810 FvH4_7g13810 FvH4_7g13810 |
| malus_domestica | MD01G1054200.v1.1 MD07G1141100.v1.1 |
| prunus_persica | Prupe.2G163800_v2.0.a1 |
| pyrus_communis | pycom01g07950 pycom07g13890 |
| rosa_chinensis | RchiOBHm_Chr1g0353991 |
| rosa_laevigata | RLG00000028238 |
| rosa_multiflora | Rmu_sc0001763.1_g000011 |
| rosa_roxburghii | Rroxscaffold_4G00301390 |
| rosa_rugosa | Rorug01G0239700 |
| rosa_samantha | Rh1AG251200 Rh1BG222800 Rh1CG235400 Rh1DG249700 |
| rosa_wichuraiana | Rw1G021910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 283 |
| Acc65I | GGTACC | 2 cut(s) | 21, 704 |
| AccB1I | GGYRCC | 2 cut(s) | 21, 704 |
| AciI | CCGC | 4 cut(s) | 51, 54, 89, 92 |
| AclWI | GGATC | 1 cut(s) | 41 |
| AcoI | YGGCCR | 3 cut(s) | 86, 255, 1155 |
| AcsI | RAATTY | 4 cut(s) | 678, 863, 1411, 1482 |
| AcuI | CTGAAG | 1 cut(s) | 858 |
| AfaI | GTAC | 6 cut(s) | 23, 111, 152, 241, 706, 1276 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 35, 565 |
| AflIII | ACRYGT | 1 cut(s) | 350 |
| AgeI | ACCGGT | 1 cut(s) | 497 |
| AgsI | TTSAA | 9 cut(s) | 158, 452, 638, 683, 811, 869, 1103, 1307, 1438 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1067 |
| AjnI | CCWGG | 1 cut(s) | 766 |
| Alw26I | GTCTC | 3 cut(s) | 87, 1054, 1346 |
| AlwI | GGATC | 1 cut(s) | 41 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 344 |
| AoxI | GGCC | 4 cut(s) | 86, 223, 255, 1155 |
| ApeKI | GCWGC | 7 cut(s) | 100, 145, 163, 190, 421, 545, 1210 |
| ApoI | RAATTY | 4 cut(s) | 678, 863, 1411, 1482 |
| AsiGI | ACCGGT | 1 cut(s) | 497 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 480 |
| Asp718I | GGTACC | 2 cut(s) | 21, 704 |
| AspLEI | GCGC | 1 cut(s) | 900 |
| AspS9I | GGNCC | 1 cut(s) | 1429 |
| AsuC2I | CCSGG | 1 cut(s) | 30 |
| AsuHPI | GGTGA | 2 cut(s) | 131, 1411 |
| AvaII | GGWCC | 1 cut(s) | 1429 |
| BalI | TGGCCA | 1 cut(s) | 1157 |
| BanI | GGYRCC | 2 cut(s) | 21, 704 |
| BauI | CACGAG | 1 cut(s) | 621 |
| BbvI | GCAGC | 7 cut(s) | 112, 157, 175, 202, 408, 532, 1197 |
| BccI | CCATC | 4 cut(s) | 141, 421, 466, 1227 |
| BceAI | ACGGC | 1 cut(s) | 242 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1202, 1236 |
| BciT130I | CCWGG | 1 cut(s) | 768 |
| BclI | TGATCA | 3 cut(s) | 577, 1416, 1498 |
| BcnI | CCSGG | 1 cut(s) | 30 |
| BcoDI | GTCTC | 3 cut(s) | 87, 1054, 1346 |
| BfaI | CTAG | 2 cut(s) | 516, 662 |
| BglII | AGATCT | 1 cut(s) | 781 |
| BmcAI | AGTACT | 1 cut(s) | 152 |
| Bme1390I | CCNGG | 2 cut(s) | 30, 768 |
| Bme18I | GGWCC | 1 cut(s) | 1429 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1067 |
| BmgT120I | GGNCC | 1 cut(s) | 1429 |
| BmiI | GGNNCC | 3 cut(s) | 23, 119, 706 |
| BmrFI | CCNGG | 2 cut(s) | 30, 768 |
| BmsI | GCATC | 5 cut(s) | 103, 190, 564, 813, 1197 |
| Bpu10I | CCTNAGC | 1 cut(s) | 215 |
| BpuMI | CCSGG | 1 cut(s) | 30 |
| Bsa29I | ATCGAT | 1 cut(s) | 891 |
| BsaBI | GATNNNNATC | 1 cut(s) | 975 |
| BsaJI | CCNNGG | 2 cut(s) | 29, 1396 |
| BsaWI | WCCGGW | 2 cut(s) | 497, 698 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 229, 259 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 35, 565 |
| Bse118I | RCCGGY | 2 cut(s) | 497, 1515 |
| Bse1I | ACTGG | 4 cut(s) | 79, 226, 743, 1111 |
| Bse8I | GATNNNNATC | 1 cut(s) | 975 |
| BseBI | CCWGG | 1 cut(s) | 768 |
| BseCI | ATCGAT | 1 cut(s) | 891 |
| BseDI | CCNNGG | 2 cut(s) | 29, 1396 |
| BseGI | GGATG | 5 cut(s) | 373, 555, 724, 841, 1015 |
| BseJI | GATNNNNATC | 1 cut(s) | 975 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 35, 565 |
| BseMII | CTCAG | 3 cut(s) | 229, 1362, 1461 |
| BseNI | ACTGG | 4 cut(s) | 79, 226, 743, 1111 |
| BseRI | GAGGAG | 1 cut(s) | 1070 |
| BseX3I | CGGCCG | 2 cut(s) | 86, 255 |
| BseXI | GCAGC | 7 cut(s) | 112, 157, 175, 202, 408, 532, 1197 |
| BseYI | CCCAGC | 1 cut(s) | 41 |
| BsgI | GTGCAG | 1 cut(s) | 302 |
| Bsh1285I | CGRYCG | 2 cut(s) | 89, 258 |
| BshFI | GGCC | 4 cut(s) | 88, 225, 257, 1157 |
| BshNI | GGYRCC | 2 cut(s) | 21, 704 |
| BshTI | ACCGGT | 1 cut(s) | 497 |
| BshVI | ATCGAT | 1 cut(s) | 891 |
| BsiEI | CGRYCG | 2 cut(s) | 89, 258 |
| BsiSI | CCGG | 4 cut(s) | 29, 498, 699, 1516 |
| BslFI | GGGAC | 1 cut(s) | 841 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 35, 565 |
| BsmAI | GTCTC | 3 cut(s) | 87, 1054, 1346 |
| BsmFI | GGGAC | 1 cut(s) | 841 |
| BsmI | GAATGC | 2 cut(s) | 67, 74 |
| BsnI | GGCC | 4 cut(s) | 88, 225, 257, 1157 |
| Bsp1407I | TGTACA | 1 cut(s) | 109 |
| Bsp143I | GATC | 9 cut(s) | 33, 577, 781, 888, 892, 1279, 1376, 1416, 1498 |
| BspACI | CCGC | 4 cut(s) | 51, 54, 89, 92 |
| BspANI | GGCC | 4 cut(s) | 88, 225, 257, 1157 |
| BspCNI | CTCAG | 3 cut(s) | 228, 1361, 1462 |
| BspDI | ATCGAT | 1 cut(s) | 891 |
| BspHI | TCATGA | 1 cut(s) | 1237 |
| BspLI | GGNNCC | 3 cut(s) | 23, 119, 706 |
| BspPI | GGATC | 1 cut(s) | 41 |
| BspQI | GCTCTTC | 1 cut(s) | 639 |
| BspT107I | GGYRCC | 2 cut(s) | 21, 704 |
| BsrFI | RCCGGY | 2 cut(s) | 497, 1515 |
| BsrGI | TGTACA | 1 cut(s) | 109 |
| BsrI | ACTGG | 4 cut(s) | 79, 226, 743, 1111 |
| BssAI | RCCGGY | 2 cut(s) | 497, 1515 |
| BssECI | CCNNGG | 2 cut(s) | 29, 1396 |
| BssMI | GATC | 9 cut(s) | 33, 577, 781, 888, 892, 1279, 1376, 1416, 1498 |
| BssSI | CACGAG | 1 cut(s) | 621 |
| BssT1I | CCWWGG | 1 cut(s) | 1396 |
| Bst2BI | CACGAG | 1 cut(s) | 621 |
| Bst2UI | CCWGG | 1 cut(s) | 768 |
| Bst4CI | ACNGT | 4 cut(s) | 8, 280, 955, 1433 |
| Bst6I | CTCTTC | 1 cut(s) | 639 |
| BstAUI | TGTACA | 1 cut(s) | 109 |
| BstC8I | GCNNGC | 1 cut(s) | 1258 |
| BstDEI | CTNAG | 4 cut(s) | 215, 1095, 1348, 1470 |
| BstF5I | GGATG | 5 cut(s) | 373, 555, 724, 841, 1015 |
| BstHHI | GCGC | 1 cut(s) | 900 |
| BstKTI | GATC | 9 cut(s) | 36, 580, 784, 891, 895, 1282, 1379, 1419, 1501 |
| BstMAI | GTCTC | 3 cut(s) | 87, 1054, 1346 |
| BstMBI | GATC | 9 cut(s) | 33, 577, 781, 888, 892, 1279, 1376, 1416, 1498 |
| BstMCI | CGRYCG | 2 cut(s) | 89, 258 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 71, 97, 100, 187, 199, 254, 667 |
| BstNI | CCWGG | 1 cut(s) | 768 |
| BstNSI | RCATGY | 1 cut(s) | 1260 |
| BstSCI | CCNGG | 2 cut(s) | 28, 766 |
| BstV1I | GCAGC | 7 cut(s) | 112, 157, 175, 202, 408, 532, 1197 |
| BstX2I | RGATCY | 1 cut(s) | 781 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 233 |
| BstYI | RGATCY | 1 cut(s) | 781 |
| BstZI | CGGCCG | 2 cut(s) | 86, 255 |
| Bsu15I | ATCGAT | 1 cut(s) | 891 |
| BsuRI | GGCC | 4 cut(s) | 88, 225, 257, 1157 |
| BsuTUI | ATCGAT | 1 cut(s) | 891 |
| BtsCI | GGATG | 5 cut(s) | 373, 555, 724, 841, 1015 |
| BtsI | GCAGTG | 2 cut(s) | 215, 1072 |
| BtsIMutI | CAGTG | 3 cut(s) | 215, 1072, 1467 |
| Cac8I | GCNNGC | 1 cut(s) | 1258 |
| CaiI | CAGNNNCTG | 1 cut(s) | 344 |
| CciI | TCATGA | 1 cut(s) | 1237 |
| CfoI | GCGC | 1 cut(s) | 900 |
| Cfr10I | RCCGGY | 2 cut(s) | 497, 1515 |
| Cfr13I | GGNCC | 1 cut(s) | 1429 |
| ClaI | ATCGAT | 1 cut(s) | 891 |
| Csp6I | GTAC | 6 cut(s) | 22, 110, 151, 240, 705, 1275 |
| CspAI | ACCGGT | 1 cut(s) | 497 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 191, 226 |
| CviAII | CATG | 5 cut(s) | 58, 727, 1199, 1238, 1257 |
| CviQI | GTAC | 6 cut(s) | 22, 110, 151, 240, 705, 1275 |
| DdeI | CTNAG | 4 cut(s) | 215, 1095, 1348, 1470 |
| DpnI | GATC | 9 cut(s) | 35, 579, 783, 890, 894, 1281, 1378, 1418, 1500 |
| DpnII | GATC | 9 cut(s) | 33, 577, 781, 888, 892, 1279, 1376, 1416, 1498 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 283 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1067 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 283 |
| EaeI | YGGCCR | 3 cut(s) | 86, 255, 1155 |
| EagI | CGGCCG | 2 cut(s) | 86, 255 |
| Eam1104I | CTCTTC | 1 cut(s) | 639 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1067 |
| EarI | CTCTTC | 1 cut(s) | 639 |
| EclXI | CGGCCG | 2 cut(s) | 86, 255 |
| Eco130I | CCWWGG | 1 cut(s) | 1396 |
| Eco32I | GATATC | 1 cut(s) | 724 |
| Eco47I | GGWCC | 1 cut(s) | 1429 |
| Eco52I | CGGCCG | 2 cut(s) | 86, 255 |
| Eco57I | CTGAAG | 1 cut(s) | 858 |
| EcoRII | CCWGG | 1 cut(s) | 766 |
| EcoRV | GATATC | 1 cut(s) | 724 |
| EcoT14I | CCWWGG | 1 cut(s) | 1396 |
| ErhI | CCWWGG | 1 cut(s) | 1396 |
| FaeI | CATG | 5 cut(s) | 61, 730, 1202, 1241, 1260 |
| FaqI | GGGAC | 1 cut(s) | 841 |
| FatI | CATG | 5 cut(s) | 57, 726, 1198, 1237, 1256 |
| FbaI | TGATCA | 3 cut(s) | 577, 1416, 1498 |
| FokI | GGATG | 5 cut(s) | 380, 542, 731, 848, 1022 |
| FspBI | CTAG | 2 cut(s) | 516, 662 |
| GlaI | GCGC | 1 cut(s) | 899 |
| GsaI | CCCAGC | 1 cut(s) | 45 |
| HaeIII | GGCC | 4 cut(s) | 88, 225, 257, 1157 |
| HapII | CCGG | 4 cut(s) | 29, 498, 699, 1516 |
| HhaI | GCGC | 1 cut(s) | 900 |
| Hin1II | CATG | 5 cut(s) | 61, 730, 1202, 1241, 1260 |
| Hin6I | GCGC | 1 cut(s) | 898 |
| HinP1I | GCGC | 1 cut(s) | 898 |
| HincII | GTYRAC | 1 cut(s) | 298 |
| HindII | GTYRAC | 1 cut(s) | 298 |
| HindIII | AAGCTT | 1 cut(s) | 1097 |
| HinfI | GANTC | 3 cut(s) | 251, 334, 1138 |
| HpaII | CCGG | 4 cut(s) | 29, 498, 699, 1516 |
| HphI | GGTGA | 2 cut(s) | 131, 1411 |
| Hpy166II | GTNNAC | 3 cut(s) | 298, 748, 1072 |
| Hpy188I | TCNGA | 6 cut(s) | 38, 289, 359, 411, 1341, 1351 |
| Hpy188III | TCNNGA | 7 cut(s) | 217, 470, 581, 623, 808, 1238, 1380 |
| Hpy8I | GTNNAC | 3 cut(s) | 298, 748, 1072 |
| HpyAV | CCTTC | 5 cut(s) | 436, 765, 882, 918, 1377 |
| HpyCH4III | ACNGT | 4 cut(s) | 8, 280, 955, 1433 |
| HpyCH4IV | ACGT | 3 cut(s) | 352, 415, 641 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 71, 97, 100, 187, 199, 254, 667 |
| HpyF3I | CTNAG | 4 cut(s) | 215, 1095, 1348, 1470 |
| HpySE526I | ACGT | 3 cut(s) | 352, 415, 641 |
| Hsp92II | CATG | 5 cut(s) | 61, 730, 1202, 1241, 1260 |
| HspAI | GCGC | 1 cut(s) | 898 |
| KpnI | GGTACC | 2 cut(s) | 25, 708 |
| Ksp22I | TGATCA | 3 cut(s) | 577, 1416, 1498 |
| Kzo9I | GATC | 9 cut(s) | 33, 577, 781, 888, 892, 1279, 1376, 1416, 1498 |
| LguI | GCTCTTC | 1 cut(s) | 639 |
| LmnI | GCTCC | 2 cut(s) | 38, 658 |
| Lsp1109I | GCAGC | 7 cut(s) | 112, 157, 175, 202, 408, 532, 1197 |
| LweI | GCATC | 5 cut(s) | 103, 190, 564, 813, 1197 |
| MaeI | CTAG | 2 cut(s) | 516, 662 |
| MaeII | ACGT | 3 cut(s) | 352, 415, 641 |
| MaeIII | GTNAC | 5 cut(s) | 370, 642, 691, 949, 1223 |
| MalI | GATC | 9 cut(s) | 35, 579, 783, 890, 894, 1281, 1378, 1418, 1500 |
| MboI | GATC | 9 cut(s) | 33, 577, 781, 888, 892, 1279, 1376, 1416, 1498 |
| MboII | GAAGA | 4 cut(s) | 485, 626, 1352, 1354 |
| MfeI | CAATTG | 1 cut(s) | 486 |
| MflI | RGATCY | 1 cut(s) | 781 |
| MlsI | TGGCCA | 1 cut(s) | 1157 |
| MluNI | TGGCCA | 1 cut(s) | 1157 |
| MmeI | TCCRAC | 3 cut(s) | 267, 641, 739 |
| Mox20I | TGGCCA | 1 cut(s) | 1157 |
| MroXI | GAANNNNTTC | 1 cut(s) | 480 |
| MscI | TGGCCA | 1 cut(s) | 1157 |
| MseI | TTAA | 6 cut(s) | 329, 494, 713, 966, 1314, 1326 |
| Msp20I | TGGCCA | 1 cut(s) | 1157 |
| MspA1I | CMGCKG | 1 cut(s) | 545 |
| MspI | CCGG | 4 cut(s) | 29, 498, 699, 1516 |
| MspR9I | CCNGG | 2 cut(s) | 30, 768 |
| MunI | CAATTG | 1 cut(s) | 486 |
| Mva1269I | GAATGC | 2 cut(s) | 67, 74 |
| MvaI | CCWGG | 1 cut(s) | 768 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 71, 97, 100, 187, 199, 254, 667 |
| NciI | CCSGG | 1 cut(s) | 30 |
| NdeII | GATC | 9 cut(s) | 33, 577, 781, 888, 892, 1279, 1376, 1416, 1498 |
| NlaIII | CATG | 5 cut(s) | 61, 730, 1202, 1241, 1260 |
| NlaIV | GGNNCC | 3 cut(s) | 23, 119, 706 |
| NmeAIII | GCCGAG | 2 cut(s) | 64, 1155 |
| NmuCI | GTSAC | 1 cut(s) | 642 |
| NspI | RCATGY | 1 cut(s) | 1260 |
| PaeI | GCATGC | 1 cut(s) | 1260 |
| PagI | TCATGA | 1 cut(s) | 1237 |
| PciSI | GCTCTTC | 1 cut(s) | 639 |
| PctI | GAATGC | 2 cut(s) | 67, 74 |
| PdmI | GAANNNNTTC | 1 cut(s) | 480 |
| PfeI | GAWTC | 3 cut(s) | 251, 334, 1138 |
| PfoI | TCCNGGA | 1 cut(s) | 766 |
| PinAI | ACCGGT | 1 cut(s) | 497 |
| Psp6I | CCWGG | 1 cut(s) | 766 |
| PspFI | CCCAGC | 1 cut(s) | 41 |
| PspGI | CCWGG | 1 cut(s) | 766 |
| PspN4I | GGNNCC | 3 cut(s) | 23, 119, 706 |
| PspPI | GGNCC | 1 cut(s) | 1429 |
| PstNI | CAGNNNCTG | 1 cut(s) | 344 |
| PsuI | RGATCY | 1 cut(s) | 781 |
| PvuII | CAGCTG | 1 cut(s) | 545 |
| RsaI | GTAC | 6 cut(s) | 23, 111, 152, 241, 706, 1276 |
| RsaNI | GTAC | 6 cut(s) | 22, 110, 151, 240, 705, 1275 |
| SapI | GCTCTTC | 1 cut(s) | 639 |
| SaqAI | TTAA | 6 cut(s) | 329, 494, 713, 966, 1314, 1326 |
| Sau3AI | GATC | 9 cut(s) | 33, 577, 781, 888, 892, 1279, 1376, 1416, 1498 |
| Sau96I | GGNCC | 1 cut(s) | 1429 |
| ScaI | AGTACT | 1 cut(s) | 152 |
| ScrFI | CCNGG | 2 cut(s) | 30, 768 |
| SfaNI | GCATC | 5 cut(s) | 103, 190, 564, 813, 1197 |
| SinI | GGWCC | 1 cut(s) | 1429 |
| SphI | GCATGC | 1 cut(s) | 1260 |
| SsiI | CCGC | 4 cut(s) | 51, 54, 89, 92 |
| SspMI | CTAG | 2 cut(s) | 516, 662 |
| StyD4I | CCNGG | 2 cut(s) | 28, 766 |
| StyI | CCWWGG | 1 cut(s) | 1396 |
| TaaI | ACNGT | 4 cut(s) | 8, 280, 955, 1433 |
| TaiI | ACGT | 3 cut(s) | 355, 418, 644 |
| TaqI | TCGA | 4 cut(s) | 891, 916, 1053, 1375 |
| TatI | WGTACW | 4 cut(s) | 109, 150, 239, 1274 |
| TauI | GCSGC | 4 cut(s) | 54, 57, 91, 94 |
| TfiI | GAWTC | 3 cut(s) | 251, 334, 1138 |
| Tru1I | TTAA | 6 cut(s) | 329, 494, 713, 966, 1314, 1326 |
| Tru9I | TTAA | 6 cut(s) | 329, 494, 713, 966, 1314, 1326 |
| TscAI | CASTG | 3 cut(s) | 215, 1079, 1474 |
| TseFI | GTSAC | 1 cut(s) | 642 |
| TseI | GCWGC | 7 cut(s) | 100, 145, 163, 190, 421, 545, 1210 |
| Tsp45I | GTSAC | 1 cut(s) | 642 |
| TspDTI | ATGAA | 3 cut(s) | 17, 74, 1226 |
| TspGWI | ACGGA | 1 cut(s) | 1235 |
| TspRI | CASTG | 3 cut(s) | 215, 1079, 1474 |
| VpaK11BI | GGWCC | 1 cut(s) | 1429 |
| XapI | RAATTY | 4 cut(s) | 678, 863, 1411, 1482 |
| XceI | RCATGY | 1 cut(s) | 1260 |
| XmnI | GAANNNNTTC | 1 cut(s) | 480 |
| XspI | CTAG | 2 cut(s) | 516, 662 |
| ZrmI | AGTACT | 1 cut(s) | 152 |