Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008324

Physical Location & Seq

Genomic Coordinates Reverse (-)

23057240 .. 23060731

Gene Structure 3492 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G62310.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2181 bp

ATGGGTACTGAGAGAAAGAGGAAAATTAGTCTGTTCGATGTTATGGACGATCCGTCTGCTCCGGCGAAGAACGCCAAAACCAGTGGTCTTCCCGACGGCGGAATCAACAGTCTGATCAATAAATGGAACGGGAAGCCTTATTCACAGAGATATTATGACATTCTGGAGAAACGGAGGACTCTACCTGTCTGGCTGCAGAAAGAGGAGTTTCTCAAAACGTTGAACAACAATCAAACCCTAATTCTGGTTGGTGAAACCGGTAGTGGTAAAACTACTCAGATTCCACAGTTTGTGATAGATGCTGTGGATGCTGAAACATCGGATAAGCGTAGGAAGTGGTTGGTTGGATGCACACAGCCTCGTAGAGTTGCTGCCATGTCTGTGTCCCGTCGTGTTGCTGAAGAGATGGATGTAACTATTGGGGAAGAAGTTGGTTACAGCATCCGTTTCGAGGACTGCAGTAGCCCCAGAACGGTTCTTAAGTACTTGACTGATGGTATGCTCCTGAGAGAAGCAATGGCGGACCCTCTTCTAGAGAGATACAAAGTCATTATTCTTGATGAGGCCCACGAAAGGACTCTAGCCACAGATGTGCTGTTTGGTCTTCTGAAAGAAGTGTTGAAAAATAGACCTGATCTTAAGTTAGTTGTGATGAGTGCAACTCTAGAAGCTGAAAAGTTTCAGGATTATTTTAGCGGTGCTCCTCTGATGAAAGTTCCTGGTAGGCTTCATCCAGTTGAGATCTTTTACACTCAGGAGCCTGAGAGGGACTATCTTGAGGCTGCTATTAGAACTGTTGTCCAGATTCACATGTGTGAGCCACCTGGCGATATTCTTGTTTTCTTAACTGGGGAGGAGGAGATTGAAGATGCATGCCGCAAAATCAATAAAGAGGTTGGTAATCTTGGGGATCAAGTGGGGCCTATTAAAGTAGTGCCACTGTATTCTACTCTTCCACCTGCGATGCAGCAGAAGATATTTGATCCTGCTCCAGAGCCTGTAACAGAAGGTGGTCCTCCTGGGAGAAAGATTGTTGTCTCCACTAACATTGCTGAGACTTCTCTCACCATAGATGGGATTGTCTACGTCATTGACCCTGGTTTTGCTAAGCAAAAAGTCTATAACCCTCGAATCCGTGTTGAGTCTTTGTTGGTGTCCCCAATTTCAAAGGCAAGTGCTCACCAGAGATCTGGTCGTGCCGGTAGAACACGGCCTGGAAAATGCTTCAGGCTTTACACAGAGAAGAGTTTTAATAATGACTTGCAGCCGCAGACGTATCCTGAAATATTGAGATCAAACCTTGCAAATACAGTTCTGACCTTGAAAAAACTGGGTATTGATGACTTGGTGCACTTTGATTTTATGGATCCCCCTGCTCCCGAAACACTGATGCGAGCCTTAGAAGTTTTGAATTACTTGGGAGCACTGGATGATGATGGTAACTTGACAAAGACAGGTGAGATCATGAGTGAGTTCCCCTTGGATCCACAGATGGCAAAGATGCTCATAGTCAGTCCTGAATTCAACTGCTCAAACGAGATTCTCTCAGTTTCAGCTATGCTATCAGTACCGAATTGCTTTATTCGGCCTAGAGAGGCTCAAAAAGCAGCAGATGAAGCTAAAGCTAGGTTTGGACACATTGAGGGAGATCACCTCACATTGTTGAATGTCTACCACGCTTTCAAGCAAAACAATGAGGATCCAAATTGGTGCTATGAAAACTTCATCAACAATAGAGCGATGAAATCTGCAGACAATGTTAGACAGCAGCTAGTCCGGATAATGTCAAGATTCAACCTGAAGATGTGCAGCACTGATTTTAACAGCCGCGACTACTACATCAACATAAGGAAGGCCATGCTTGCCGGTTATTTCATGCAAGTGGCTCACTTAGAACGTACTGGCCATTACTTGACCGTCAAAGACAACCAAGTGGTTCATTTGCATCCATCCAATTGCTTGGATCACAAACCGGAGTGGGTAATCTACAACGAATATGTTTTGACTAGCCGGAATTTCATCAGAACTGTGACAGACATTCGTGGTGAATGGCTAGTTGATGTTGCTTCTCATTATTACGATCTTTCGAACTTTCCCAACTGTGAAGCCAAACGTGTAATCGAGAAGCTTTATAAGAAGAGAGAAAGGGAGAAGGAAGAGAGCAAGAAGAACCGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0010467 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

AAA_22 DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

726

Amino Acids

82.69

Weight (kDa)

6.94

Isoelectric Point (pI)

43.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	69 - 226	2.8e-08	DEAD/DEAH box helicase
AAA_22	PF13401	77 - 217	2.6e-06	AAA domain
Helicase_C	PF00271	265 - 403	2.6e-09	Helicase conserved C-terminal domain
WHD_HA2	PF04408	466 - 494	2.1e-10	Helicase associated domain (HA2), winged-helix
HA2_C	PF21010	495 - 523	1.3e-06	Helicase associated domain (HA2), ratchet-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008324)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47250 AT3G62310 AT3G62310 AT3G62310
fragaria_vesca	FvH4_1g26860 FvH4_1g26860
malus_domestica	MD09G1286000.v1.1 MD17G1278600.v1.1
prunus_persica	Prupe.3G007400_v2.0.a1
pyrus_communis	pycom09g19330 pycom17g27620 pycom17g27630
rosa_chinensis	RchiOBHm_Chr3g0487101
rosa_laevigata	RLG00000023033
rosa_multiflora	Rmu_co8377811.1_g000001 Rmu_ssc0000271.1_g000001
rosa_roxburghii	Rroxscaffold_6G00395180
rosa_rugosa	Rorug03G0231000
rosa_samantha	Rh3AG279300 Rh3BG315300 Rh3CG313500 Rh3DG310300
rosa_wichuraiana	Rw3G024760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2133
AarI	CACCTGC	1 cut(s)	967
Acc36I	ACCTGC	1 cut(s)	967
AccI	GTMKAC	2 cut(s)	1083, 1671
AccII	CGCG	1 cut(s)	1830
AccIII	TCCGGA	1 cut(s)	1776
AciI	CCGC	6 cut(s)	99, 521, 696, 877, 1268, 1828
AclI	AACGTT	1 cut(s)	218
AcoI	YGGCCR	1 cut(s)	1903
AcsI	RAATTY	2 cut(s)	1520, 2014
AcuI	CTGAAG	3 cut(s)	420, 1210, 1820
AfaI	GTAC	4 cut(s)	7, 485, 1569, 1900
AfiI	CCNNNNNNNGG	6 cut(s)	98, 244, 451, 472, 573, 1074
AflII	CTTAAG	2 cut(s)	479, 638
AflIII	ACRYGT	2 cut(s)	810, 2113
AgeI	ACCGGT	1 cut(s)	257
AhdI	GACNNNNNGTC	1 cut(s)	52
AjnI	CCWGG	5 cut(s)	718, 823, 1018, 1096, 1213
AleI	CACNNNNGTG	2 cut(s)	590, 813
AluBI	AGCT	6 cut(s)	671, 1556, 1619, 1625, 1771, 2128
AluI	AGCT	6 cut(s)	671, 1556, 1619, 1625, 1771, 2128
Alw21I	GWGCWC	4 cut(s)	703, 1180, 1353, 1426
Alw26I	GTCTC	2 cut(s)	1042, 1049
Alw44I	GTGCAC	1 cut(s)	1349
AlwNI	CAGNNNCTG	1 cut(s)	998
Aor13HI	TCCGGA	1 cut(s)	1776
AoxI	GGCC	6 cut(s)	564, 920, 1211, 1586, 1854, 1903
ApaLI	GTGCAC	1 cut(s)	1349
ApeKI	GCWGC	8 cut(s)	193, 371, 782, 967, 1264, 1607, 1768, 1809
ApoI	RAATTY	2 cut(s)	1520, 2014
ArsI	GACNNNNNNTTYG	2 cut(s)	1085, 1117
AsiGI	ACCGGT	1 cut(s)	257
Asp700I	GAANNNNTTC	1 cut(s)	678
AspS9I	GGNCC	4 cut(s)	523, 565, 920, 1013
AsuHPI	GGTGA	6 cut(s)	263, 1057, 1172, 1469, 1643, 2057
AsuII	TTCGAA	1 cut(s)	2087
AvaII	GGWCC	2 cut(s)	523, 1013
BaeGI	GKGCMC	1 cut(s)	1353
BalI	TGGCCA	1 cut(s)	1905
BamHI	GGATCC	3 cut(s)	1366, 1483, 1699
BbsI	GAAGAC	2 cut(s)	80, 596
Bbv12I	GWGCWC	4 cut(s)	703, 1180, 1353, 1426
BbvI	GCAGC	8 cut(s)	180, 358, 769, 979, 1276, 1619, 1780, 1821
BccI	CCATC	6 cut(s)	400, 488, 1067, 1430, 1486, 1957
BceAI	ACGGC	2 cut(s)	112, 1226
BcgI	CGANNNNNNTGC	4 cut(s)	38, 72, 430, 464
BciT130I	CCWGG	5 cut(s)	720, 825, 1020, 1098, 1215
BciVI	GTATCC	1 cut(s)	1287
BclI	TGATCA	1 cut(s)	114
BcoDI	GTCTC	2 cut(s)	1042, 1049
BfaI	CTAG	8 cut(s)	533, 581, 665, 1590, 1626, 1772, 2007, 2054
BfmI	CTRYAG	3 cut(s)	194, 457, 1749
BfrI	CTTAAG	2 cut(s)	479, 638
BfuAI	ACCTGC	1 cut(s)	967
BfuI	GTATCC	1 cut(s)	1287
BglII	AGATCT	2 cut(s)	741, 1187
BlpI	GCTNAGC	1 cut(s)	1107
BmcAI	AGTACT	1 cut(s)	485
Bme1390I	CCNGG	5 cut(s)	720, 825, 1020, 1098, 1215
Bme18I	GGWCC	2 cut(s)	523, 1013
BmeRI	GACNNNNNGTC	1 cut(s)	52
BmgT120I	GGNCC	4 cut(s)	523, 565, 920, 1013
BmiI	GGNNCC	6 cut(s)	525, 759, 921, 1368, 1485, 1701
BmrFI	CCNGG	5 cut(s)	720, 825, 1020, 1098, 1215
BmrI	ACTGGG	2 cut(s)	858, 1340
BmsI	GCATC	9 cut(s)	289, 298, 338, 450, 859, 954, 1380, 1491, 1954
BmuI	ACTGGG	2 cut(s)	858, 1340
BpiI	GAAGAC	2 cut(s)	80, 596
BplI	GAGNNNNNCTC	6 cut(s)	646, 678, 1529, 1561, 1638, 1670
BpmI	CTGGAG	2 cut(s)	185, 975
Bpu1102I	GCTNAGC	1 cut(s)	1107
Bpu14I	TTCGAA	1 cut(s)	2087
BpuEI	CTTGAG	1 cut(s)	797
BsaJI	CCNNGG	3 cut(s)	1019, 1096, 1479
BsaWI	WCCGGW	4 cut(s)	257, 1776, 1972, 2172
Bsc4I	CCNNNNNNNGG	6 cut(s)	98, 244, 451, 472, 573, 1074
Bse118I	RCCGGY	3 cut(s)	257, 1199, 1865
Bse1I	ACTGG	6 cut(s)	81, 734, 853, 1335, 1431, 1906
Bse3DI	GCAATG	2 cut(s)	522, 1047
BseAI	TCCGGA	1 cut(s)	1776
BseBI	CCWGG	5 cut(s)	720, 825, 1020, 1098, 1215
BseDI	CCNNGG	3 cut(s)	1019, 1096, 1479
BseGI	GGATG	8 cut(s)	313, 353, 415, 441, 730, 1435, 1945, 1949
BseLI	CCNNNNNNNGG	6 cut(s)	98, 244, 451, 472, 573, 1074
BseMI	GCAATG	2 cut(s)	522, 1047
BseMII	CTCAG	6 cut(s)	290, 497, 753, 767, 1044, 1560
BseNI	ACTGG	6 cut(s)	81, 734, 853, 1335, 1431, 1906
BseRI	GAGGAG	4 cut(s)	218, 693, 869, 872
BseSI	GKGCMC	1 cut(s)	1353
BseXI	GCAGC	8 cut(s)	180, 358, 769, 979, 1276, 1619, 1780, 1821
BsgI	GTGCAG	1 cut(s)	1828
Bsh1236I	CGCG	1 cut(s)	1830
BshFI	GGCC	6 cut(s)	566, 922, 1213, 1588, 1856, 1905
BshTI	ACCGGT	1 cut(s)	257
BsiHKAI	GWGCWC	4 cut(s)	703, 1180, 1353, 1426
BsiSI	CCGG	8 cut(s)	62, 258, 1200, 1777, 1866, 1973, 2011, 2173
BslFI	GGGAC	3 cut(s)	370, 782, 1141
BslI	CCNNNNNNNGG	6 cut(s)	98, 244, 451, 472, 573, 1074
BsmAI	GTCTC	2 cut(s)	1042, 1049
BsmFI	GGGAC	3 cut(s)	370, 782, 1141
BsnI	GGCC	6 cut(s)	566, 922, 1213, 1588, 1856, 1905
Bsp119I	TTCGAA	1 cut(s)	2087
Bsp1286I	GDGCHC	4 cut(s)	703, 1180, 1353, 1426
Bsp13I	TCCGGA	1 cut(s)	1776
Bsp1720I	GCTNAGC	1 cut(s)	1107
BspACI	CCGC	6 cut(s)	99, 521, 696, 877, 1268, 1828
BspANI	GGCC	6 cut(s)	566, 922, 1213, 1588, 1856, 1905
BspCNI	CTCAG	6 cut(s)	289, 498, 754, 766, 1045, 1559
BspEI	TCCGGA	1 cut(s)	1776
BspFNI	CGCG	1 cut(s)	1830
BspHI	TCATGA	1 cut(s)	1464
BspLI	GGNNCC	6 cut(s)	525, 759, 921, 1368, 1485, 1701
BspMAI	CTGCAG	3 cut(s)	198, 461, 1753
BspMI	ACCTGC	1 cut(s)	967
BspT104I	TTCGAA	1 cut(s)	2087
BspTI	CTTAAG	2 cut(s)	479, 638
BsrDI	GCAATG	2 cut(s)	522, 1047
BsrFI	RCCGGY	3 cut(s)	257, 1199, 1865
BsrI	ACTGG	6 cut(s)	81, 734, 853, 1335, 1431, 1906
BssAI	RCCGGY	3 cut(s)	257, 1199, 1865
BssECI	CCNNGG	3 cut(s)	1019, 1096, 1479
BssT1I	CCWWGG	1 cut(s)	1479
Bst2UI	CCWGG	5 cut(s)	720, 825, 1020, 1098, 1215
Bst4CI	ACNGT	9 cut(s)	110, 288, 475, 796, 942, 1312, 1918, 2029, 2102
Bst6I	CTCTTC	6 cut(s)	396, 534, 957, 1238, 2132, 2151
BstAFI	CTTAAG	2 cut(s)	479, 638
BstBI	TTCGAA	1 cut(s)	2087
BstC8I	GCNNGC	3 cut(s)	874, 1395, 1863
BstF5I	GGATG	8 cut(s)	313, 353, 415, 441, 730, 1435, 1945, 1949
BstFNI	CGCG	1 cut(s)	1830
BstMAI	GTCTC	2 cut(s)	1042, 1049
BstMWI	GCNNNNNNNGC	5 cut(s)	71, 308, 1604, 1616, 1862
BstNI	CCWGG	5 cut(s)	720, 825, 1020, 1098, 1215
BstNSI	RCATGY	2 cut(s)	814, 876
BstSCI	CCNGG	5 cut(s)	718, 823, 1018, 1096, 1213
BstSFI	CTRYAG	3 cut(s)	194, 457, 1749
BstSLI	GKGCMC	1 cut(s)	1353
BstUI	CGCG	1 cut(s)	1830
BstV1I	GCAGC	8 cut(s)	180, 358, 769, 979, 1276, 1619, 1780, 1821
BstV2I	GAAGAC	2 cut(s)	80, 596
BstX2I	RGATCY	5 cut(s)	741, 1187, 1366, 1483, 1699
BstXI	CCANNNNNNTGG	2 cut(s)	1190, 1960
BstYI	RGATCY	5 cut(s)	741, 1187, 1366, 1483, 1699
BsuI	GTATCC	1 cut(s)	1287
BsuRI	GGCC	6 cut(s)	566, 922, 1213, 1588, 1856, 1905
BtgZI	GCGATG	2 cut(s)	977, 1754
BtsCI	GGATG	8 cut(s)	313, 353, 415, 441, 730, 1435, 1945, 1949
BtsIMutI	CAGTG	5 cut(s)	88, 938, 1385, 1424, 1812
BveI	ACCTGC	1 cut(s)	967
Cac8I	GCNNGC	3 cut(s)	874, 1395, 1863
CaiI	CAGNNNCTG	1 cut(s)	998
CciI	TCATGA	1 cut(s)	1464
Cfr10I	RCCGGY	3 cut(s)	257, 1199, 1865
Cfr13I	GGNCC	4 cut(s)	523, 565, 920, 1013
Csp6I	GTAC	4 cut(s)	6, 484, 1568, 1899
CspAI	ACCGGT	1 cut(s)	257
CspCI	CAANNNNNGTGG	4 cut(s)	64, 99, 1030, 1065
CviAII	CATG	6 cut(s)	376, 811, 873, 1465, 1858, 1876
CviQI	GTAC	4 cut(s)	6, 484, 1568, 1899
DriI	GACNNNNNGTC	1 cut(s)	52
EaeI	YGGCCR	1 cut(s)	1903
Eam1104I	CTCTTC	6 cut(s)	396, 534, 957, 1238, 2132, 2151
Eam1105I	GACNNNNNGTC	1 cut(s)	52
EarI	CTCTTC	6 cut(s)	396, 534, 957, 1238, 2132, 2151
EciI	GGCGGA	2 cut(s)	114, 536
Eco130I	CCWWGG	1 cut(s)	1479
Eco47I	GGWCC	2 cut(s)	523, 1013
Eco57I	CTGAAG	3 cut(s)	420, 1210, 1820
EcoO109I	RGGNCCY	1 cut(s)	920
EcoRI	GAATTC	1 cut(s)	1520
EcoRII	CCWGG	5 cut(s)	718, 823, 1018, 1096, 1213
EcoT14I	CCWWGG	1 cut(s)	1479
EcoT22I	ATGCAT	1 cut(s)	874
ErhI	CCWWGG	1 cut(s)	1479
FaeI	CATG	6 cut(s)	379, 814, 876, 1468, 1861, 1879
FaqI	GGGAC	3 cut(s)	370, 782, 1141
FatI	CATG	6 cut(s)	375, 810, 872, 1464, 1857, 1875
FbaI	TGATCA	1 cut(s)	114
FblI	GTMKAC	2 cut(s)	1083, 1671
FokI	GGATG	8 cut(s)	320, 360, 422, 428, 717, 1442, 1932, 1936
FspBI	CTAG	8 cut(s)	533, 581, 665, 1590, 1626, 1772, 2007, 2054
GsuI	CTGGAG	2 cut(s)	185, 975
HaeIII	GGCC	6 cut(s)	566, 922, 1213, 1588, 1856, 1905
HapII	CCGG	8 cut(s)	62, 258, 1200, 1777, 1866, 1973, 2011, 2173
Hin1II	CATG	6 cut(s)	379, 814, 876, 1468, 1861, 1879
HindIII	AAGCTT	1 cut(s)	2126
HinfI	GANTC	9 cut(s)	102, 178, 280, 577, 805, 1131, 1142, 1540, 1791
HpaII	CCGG	8 cut(s)	62, 258, 1200, 1777, 1866, 1973, 2011, 2173
HphI	GGTGA	6 cut(s)	263, 1057, 1172, 1469, 1643, 2057
Hpy166II	GTNNAC	3 cut(s)	1084, 1351, 1672
Hpy188I	TCNGA	7 cut(s)	114, 279, 322, 609, 708, 1317, 2024
Hpy8I	GTNNAC	3 cut(s)	1084, 1351, 1672
Hpy99I	CGWCG	2 cut(s)	98, 393
HpyAV	CCTTC	3 cut(s)	1001, 1846, 2146
HpyCH4III	ACNGT	9 cut(s)	110, 288, 475, 796, 942, 1312, 1918, 2029, 2102
HpyCH4IV	ACGT	5 cut(s)	218, 1086, 1274, 1897, 2113
HpyF10VI	GCNNNNNNNGC	5 cut(s)	71, 308, 1604, 1616, 1862
HpySE526I	ACGT	5 cut(s)	218, 1086, 1274, 1897, 2113
Hsp92II	CATG	6 cut(s)	379, 814, 876, 1468, 1861, 1879
Kpn2I	TCCGGA	1 cut(s)	1776
Ksp22I	TGATCA	1 cut(s)	114
LmnI	GCTCC	7 cut(s)	64, 507, 706, 757, 994, 1381, 1421
Lsp1109I	GCAGC	8 cut(s)	180, 358, 769, 979, 1276, 1619, 1780, 1821
LweI	GCATC	9 cut(s)	289, 298, 338, 450, 859, 954, 1380, 1491, 1954
MaeI	CTAG	8 cut(s)	533, 581, 665, 1590, 1626, 1772, 2007, 2054
MaeII	ACGT	5 cut(s)	218, 1086, 1274, 1897, 2113
MaeIII	GTNAC	5 cut(s)	412, 434, 1000, 1439, 2029
MfeI	CAATTG	1 cut(s)	1954
MflI	RGATCY	5 cut(s)	741, 1187, 1366, 1483, 1699
MhlI	GDGCHC	4 cut(s)	703, 1180, 1353, 1426
MlsI	TGGCCA	1 cut(s)	1905
MluCI	AATT	9 cut(s)	24, 240, 1161, 1411, 1520, 1573, 1705, 1954, 2014
MluNI	TGGCCA	1 cut(s)	1905
MlyI	GAGTC	3 cut(s)	172, 571, 1151
MmeI	TCCRAC	1 cut(s)	325
Mox20I	TGGCCA	1 cut(s)	1905
Mph1103I	ATGCAT	1 cut(s)	874
MroI	TCCGGA	1 cut(s)	1776
MroXI	GAANNNNTTC	1 cut(s)	678
MscI	TGGCCA	1 cut(s)	1905
MseI	TTAA	6 cut(s)	480, 639, 845, 927, 1251, 1821
MslI	CAYNNNNRTG	4 cut(s)	380, 590, 813, 1880
Msp20I	TGGCCA	1 cut(s)	1905
MspCI	CTTAAG	2 cut(s)	479, 638
MspI	CCGG	8 cut(s)	62, 258, 1200, 1777, 1866, 1973, 2011, 2173
MspR9I	CCNGG	5 cut(s)	720, 825, 1020, 1098, 1215
MunI	CAATTG	1 cut(s)	1954
MvaI	CCWGG	5 cut(s)	720, 825, 1020, 1098, 1215
MvnI	CGCG	1 cut(s)	1830
MwoI	GCNNNNNNNGC	5 cut(s)	71, 308, 1604, 1616, 1862
NlaIII	CATG	6 cut(s)	379, 814, 876, 1468, 1861, 1879
NlaIV	GGNNCC	6 cut(s)	525, 759, 921, 1368, 1485, 1701
NmuCI	GTSAC	1 cut(s)	2029
NsiI	ATGCAT	1 cut(s)	874
NspI	RCATGY	2 cut(s)	814, 876
NspV	TTCGAA	1 cut(s)	2087
OliI	CACNNNNGTG	2 cut(s)	590, 813
PaeI	GCATGC	1 cut(s)	876
PagI	TCATGA	1 cut(s)	1464
PaqCI	CACCTGC	1 cut(s)	967
PciI	ACATGT	1 cut(s)	810
PdmI	GAANNNNTTC	1 cut(s)	678
PfeI	GAWTC	6 cut(s)	102, 280, 805, 1131, 1540, 1791
PinAI	ACCGGT	1 cut(s)	257
PleI	GAGTC	3 cut(s)	172, 571, 1150
PpsI	GAGTC	3 cut(s)	172, 571, 1150
PscI	ACATGT	1 cut(s)	810
PsiI	TTATAA	1 cut(s)	2133
Psp1406I	AACGTT	1 cut(s)	218
Psp6I	CCWGG	5 cut(s)	718, 823, 1018, 1096, 1213
PspGI	CCWGG	5 cut(s)	718, 823, 1018, 1096, 1213
PspN4I	GGNNCC	6 cut(s)	525, 759, 921, 1368, 1485, 1701
PspPI	GGNCC	4 cut(s)	523, 565, 920, 1013
PstI	CTGCAG	3 cut(s)	198, 461, 1753
PstNI	CAGNNNCTG	1 cut(s)	998
PsuI	RGATCY	5 cut(s)	741, 1187, 1366, 1483, 1699
RsaI	GTAC	4 cut(s)	7, 485, 1569, 1900
RsaNI	GTAC	4 cut(s)	6, 484, 1568, 1899
RseI	CAYNNNNRTG	4 cut(s)	380, 590, 813, 1880
SaqAI	TTAA	6 cut(s)	480, 639, 845, 927, 1251, 1821
Sau96I	GGNCC	4 cut(s)	523, 565, 920, 1013
ScaI	AGTACT	1 cut(s)	485
SchI	GAGTC	3 cut(s)	172, 571, 1151
ScrFI	CCNGG	5 cut(s)	720, 825, 1020, 1098, 1215
SduI	GDGCHC	4 cut(s)	703, 1180, 1353, 1426
SfaNI	GCATC	9 cut(s)	289, 298, 338, 450, 859, 954, 1380, 1491, 1954
SfcI	CTRYAG	3 cut(s)	194, 457, 1749
SfuI	TTCGAA	1 cut(s)	2087
SinI	GGWCC	2 cut(s)	523, 1013
SmiMI	CAYNNNNRTG	4 cut(s)	380, 590, 813, 1880
SmlI	CTYRAG	3 cut(s)	479, 638, 776
SmoI	CTYRAG	3 cut(s)	479, 638, 776
SphI	GCATGC	1 cut(s)	876
Sse9I	AATT	9 cut(s)	24, 240, 1161, 1411, 1520, 1573, 1705, 1954, 2014
SsiI	CCGC	6 cut(s)	99, 521, 696, 877, 1268, 1828
SspI	AATATT	1 cut(s)	1287
SspMI	CTAG	8 cut(s)	533, 581, 665, 1590, 1626, 1772, 2007, 2054
StyD4I	CCNGG	5 cut(s)	718, 823, 1018, 1096, 1213
StyI	CCWWGG	1 cut(s)	1479
TaaI	ACNGT	9 cut(s)	110, 288, 475, 796, 942, 1312, 1918, 2029, 2102
TaiI	ACGT	5 cut(s)	221, 1089, 1277, 1900, 2116
TaqI	TCGA	5 cut(s)	36, 450, 1129, 2087, 2121
TasI	AATT	9 cut(s)	24, 240, 1161, 1411, 1520, 1573, 1705, 1954, 2014
TatI	WGTACW	1 cut(s)	483
TauI	GCSGC	3 cut(s)	879, 1270, 1830
TfiI	GAWTC	6 cut(s)	102, 280, 805, 1131, 1540, 1791
Tru1I	TTAA	6 cut(s)	480, 639, 845, 927, 1251, 1821
Tru9I	TTAA	6 cut(s)	480, 639, 845, 927, 1251, 1821
TscAI	CASTG	5 cut(s)	88, 945, 1392, 1431, 1819
TseFI	GTSAC	1 cut(s)	2029
TseI	GCWGC	8 cut(s)	193, 371, 782, 967, 1264, 1607, 1768, 1809
Tsp45I	GTSAC	1 cut(s)	2029
TspDTI	ATGAA	9 cut(s)	719, 725, 1629, 1714, 1731, 1757, 1864, 1928, 2008
TspGWI	ACGGA	4 cut(s)	42, 187, 434, 1124
TspRI	CASTG	5 cut(s)	88, 945, 1392, 1431, 1819
Vha464I	CTTAAG	2 cut(s)	479, 638
VneI	GTGCAC	1 cut(s)	1349
VpaK11BI	GGWCC	2 cut(s)	523, 1013
XapI	RAATTY	2 cut(s)	1520, 2014
XbaI	TCTAGA	2 cut(s)	532, 664
XceI	RCATGY	2 cut(s)	814, 876
XmiI	GTMKAC	2 cut(s)	1083, 1671
XmnI	GAANNNNTTC	1 cut(s)	678
XspI	CTAG	8 cut(s)	533, 581, 665, 1590, 1626, 1772, 2007, 2054
ZrmI	AGTACT	1 cut(s)	485
Zsp2I	ATGCAT	1 cut(s)	874

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.