AT3G62890

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0016646
Physical Location & Seq
Forward (+)
23246129 .. 23248063
1935 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G62890.1

Sequence Viewer

Length: 1722 bp
ATGAGCAAGGGGGCGGCAATAATAGCTTATGCAAATCCCATCTTTCATATTCGACATCTAAAGCTTGAATCTTTCTTGTGGAACATCATCATTCGTGCCATTGTTCACAATGTTTCGTCGCCTCAACGACATTCTCCGATCTCAGTCTACCTCCGTATGCGCAACCATCGCGTCTCTCCCGATTTTCATACCTTTCCGTTTCTTCTCCCTTCTTTCCACAATCCGCTTCATCTTCCTCTTGGGCAACGAACTCATGCTCAGATTCTTCTTTTTGGACTTGACAAAGACCCATTTGTCCGAACTTCACTGCTCAACATGTATTCTTCCTGTGGCGACTTGAGATCAGCTCAGCGAGTTTTCGATGACTCGGGCTCGAAGGATTTACCGGCCTGGAACTCTGTGGTCAATGCTTATGCCAAAGCTGGGTTGATCGATGATGCGCGGAAACTGTTCGACGAAATGCCTGAAAGAAACGTGATTTCCTGGAGCTGCTTGATTAACGGCTACGTTATGTGTGGGAAATACAAAGAAGCGCTTGATTTGTTCCGGGAGATGCAATTACCTAAACCAAACGAAGCATTCGTCAGACCCAACGAGTTTACAATGTCGACTGTACTCTCGGCTTGTGGGCGATTGGGTGCGCTCGAGCAAGGGAAATGGGTTCACGCTTACATCGATAAGTACCACGTTGAGATTGACATTGTCTTAGGCACAGCTCTCATTGATATGTACGCCAAATGTGGGAGCCTCGAGAGGGCGAAAAGGGTTTTCAATGCCTTGGGATCCAAGAAAGATGTCAAAGCTTACAGTGCTATGATATGTTGCTTAGCAATGTACGGTCTCACAGATGAGTGCTTCCAACTGTTCTCTGAGATGACCACGAGTGACAACATAAACCCAAACTCTGTGACATTTGTGGGCATTCTCGGTGCTTGTGTACATCGAGGTCTAATAAACGAAGGAAAATCTTACTTTAAAATGATGATTGAGGAATTTGGTATCACGCCATCAATCCAGCATTATGGTTGTATGGTTGATCTCTACGGAAGATCTGGTTTGATCAAAGAAGCAGAGAGCTTTATAGCATCTATGCCTATGGAGCCTGATGTACTTATTTGGGGGTCTCTCTTAAGCGGATCAAGAATGCTTGGGGATATCAAGACTTGTGAAGGTGCCCTCAAGCGACTCATCGAGCTAGATCCTATGAACAGTGGAGCATATGTGCTTCTCTCTAACGTCTATGCCAAAACAGGGAGGTGGATGGAAGTCAAGTGTATCAGACACGAAATGGAGGTAAAGGGCATTAATAAAGTTCCGGGATGTAGCTATGTTGAAGTAGAGGGAGTGGTTCACGAGTTTGTTGTAGGAGACGAATCTCAACAAGAGAGCGAAAGGATCTATGCTATGCTCGATGAGATAATGCAGAGGCTGAGAGAAGCTGGATATGTTACAGACACTAAGGAGGTTTTACTTGATCTTAACGAGAAAGATAAAGAGATAGCTTTGTCTTACCACAGTGAGAAACTGGCTATTGCGTTCTGTTTGATGAAGACAAGGCCTGGAACTCCAGTGAGAATCATCAAGAACCTCAGAATCTGTGGAGATTGTCATCTTGTAATGAAGATGATCTCGAAGCTTTTTAGTAGAGAAATTGTTGTGAGAGATTGTAATAGATTTCACCATTTTAGAGACGGGTCTTGCTCTTGCAGAGATTTTTGGTGA

Protein Analysis

573

Amino Acids

64.95

Weight (kDa)

7.53

Isoelectric Point (pI)

44.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 129 - 159 4.2e-06 PPR repeat family
PPR PF01535 130 - 159 3.6e-08 PPR repeat
PPR_2 PF13041 157 - 210 5.2e-09 PPR repeat family
PPR_1 PF12854 157 - 186 1e-05 PPR repeat
PPR PF01535 160 - 186 1.4e-07 PPR repeat
PPR_2 PF13041 264 - 313 1.3e-06 PPR repeat family
E_motif PF20431 387 - 445 2.8e-21 E motif
DYW_deaminase PF14432 481 - 573 1e-38 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016646)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G62890
fragaria_vesca FvH4_2g25760
malus_domestica MD11G1309500.v1.1
prunus_persica Prupe.8G261800_v2.0.a1
pyrus_communis pycom11g27060
rosa_chinensis RchiOBHm_Chr6g0294051 RchiOBHm_Chr6g0294061
rosa_laevigata RLG00000011903
rosa_multiflora Rmu_sc0016897.1_g000002
rosa_roxburghii Rroxscaffold_7G00173690
rosa_rugosa Rorug06G0240600
rosa_samantha Rh6BG360400 Rh6CG367600 Rh6DG354300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 293
Acc16I TGCGCA 1 cut(s) 161
AccB1I GGYRCC 1 cut(s) 1172
AccI GTMKAC 2 cut(s) 147, 608
AccII CGCG 2 cut(s) 171, 442
AciI CCGC 4 cut(s) 14, 224, 442, 1134
AclWI GGATC 5 cut(s) 777, 790, 1144, 1193, 1403
AcsI RAATTY 1 cut(s) 992
AfaI GTAC 6 cut(s) 615, 683, 731, 836, 939, 1110
AfeI AGCGCT 1 cut(s) 534
AfiI CCNNNNNNNGG 4 cut(s) 423, 741, 754, 1251
AflII CTTAAG 1 cut(s) 1129
AflIII ACRYGT 1 cut(s) 315
AgsI TTSAA 3 cut(s) 68, 772, 1334
AjnI CCWGG 3 cut(s) 389, 482, 1558
Alw26I GTCTC 5 cut(s) 178, 845, 1128, 1362, 1683
AlwI GGATC 5 cut(s) 777, 790, 1144, 1193, 1403
AlwNI CAGNNNCTG 2 cut(s) 1429, 1596
Ama87I CYCGRG 3 cut(s) 367, 644, 749
Aor51HI AGCGCT 1 cut(s) 534
AoxI GGCC 2 cut(s) 387, 1556
ApeKI GCWGC 1 cut(s) 489
ApoI RAATTY 1 cut(s) 992
ArsI GACNNNNNNTTYG 2 cut(s) 567, 599
AseI ATTAAT 1 cut(s) 1305
Asp700I GAANNNNTTC 1 cut(s) 449
AspLEI GCGC 4 cut(s) 162, 442, 535, 643
AsuC2I CCSGG 2 cut(s) 548, 1317
AsuHPI GGTGA 1 cut(s) 1670
AvaI CYCGRG 3 cut(s) 367, 644, 749
BaeGI GKGCMC 1 cut(s) 1177
BamHI GGATCC 1 cut(s) 782
BanI GGYRCC 1 cut(s) 1172
BanII GRGCYC 1 cut(s) 374
BauI CACGAG 2 cut(s) 880, 1352
BbsI GAAGAC 1 cut(s) 1556
BbvI GCAGC 1 cut(s) 476
BccI CCATC 4 cut(s) 47, 174, 1015, 1255
BceAI ACGGC 1 cut(s) 517
BciT130I CCWGG 3 cut(s) 391, 484, 1560
BclI TGATCA 1 cut(s) 1059
BcnI CCSGG 2 cut(s) 548, 1317
BcoDI GTCTC 5 cut(s) 178, 845, 1128, 1362, 1683
BfaI CTAG 1 cut(s) 1196
BfoI RGCGCY 1 cut(s) 536
BfrI CTTAAG 1 cut(s) 1129
BglII AGATCT 1 cut(s) 1049
BisI GCNGC 2 cut(s) 15, 490
BlpI GCTNAGC 2 cut(s) 348, 826
BlsI GCNGC 2 cut(s) 16, 491
Bme1390I CCNGG 5 cut(s) 391, 484, 548, 1317, 1560
BmeT110I CYCGRG 3 cut(s) 367, 644, 749
BmiI GGNNCC 4 cut(s) 746, 784, 1101, 1174
BmrFI CCNGG 5 cut(s) 391, 484, 548, 1317, 1560
BmsI GCATC 3 cut(s) 427, 543, 1094
BpiI GAAGAC 1 cut(s) 1556
BplI GAGNNNNNCTC 2 cut(s) 331, 363
BpmI CTGGAG 2 cut(s) 505, 1551
Bpu1102I GCTNAGC 2 cut(s) 348, 826
BpuEI CTTGAG 2 cut(s) 358, 1163
BpuMI CCSGG 2 cut(s) 548, 1317
Bsa29I ATCGAT 2 cut(s) 432, 675
BsaBI GATNNNNATC 1 cut(s) 1608
BsaI GGTCTC 2 cut(s) 845, 1128
BsaJI CCNNGG 1 cut(s) 777
BsaXI ACNNNNNCTCC 2 cut(s) 1206, 1236
Bsc4I CCNNNNNNNGG 4 cut(s) 423, 741, 754, 1251
Bse118I RCCGGY 1 cut(s) 385
Bse1I ACTGG 2 cut(s) 1530, 1568
Bse3DI GCAATG 1 cut(s) 837
Bse8I GATNNNNATC 1 cut(s) 1608
BseBI CCWGG 3 cut(s) 391, 484, 1560
BseCI ATCGAT 2 cut(s) 432, 675
BseDI CCNNGG 1 cut(s) 777
BseGI GGATG 2 cut(s) 1266, 1325
BseJI GATNNNNATC 1 cut(s) 1608
BseLI CCNNNNNNNGG 4 cut(s) 423, 741, 754, 1251
BseMI GCAATG 1 cut(s) 837
BseMII CTCAG 6 cut(s) 156, 272, 362, 861, 1421, 1603
BseNI ACTGG 2 cut(s) 1530, 1568
BseSI GKGCMC 1 cut(s) 1177
BseXI GCAGC 1 cut(s) 476
BseYI CCCAGC 1 cut(s) 422
Bsh1236I CGCG 2 cut(s) 171, 442
BshFI GGCC 2 cut(s) 389, 1558
BshNI GGYRCC 1 cut(s) 1172
BshVI ATCGAT 2 cut(s) 432, 675
BsiHKCI CYCGRG 3 cut(s) 367, 644, 749
BsiSI CCGG 3 cut(s) 386, 547, 1316
BslI CCNNNNNNNGG 4 cut(s) 423, 741, 754, 1251
BsmAI GTCTC 5 cut(s) 178, 845, 1128, 1362, 1683
BsmBI CGTCTC 3 cut(s) 178, 1362, 1683
BsmI GAATGC 3 cut(s) 578, 921, 1149
BsnI GGCC 2 cut(s) 389, 1558
Bso31I GGTCTC 2 cut(s) 845, 1128
BsoBI CYCGRG 3 cut(s) 367, 644, 749
Bsp1286I GDGCHC 2 cut(s) 374, 1177
Bsp1407I TGTACA 1 cut(s) 937
Bsp1720I GCTNAGC 2 cut(s) 348, 826
BspACI CCGC 4 cut(s) 14, 224, 442, 1134
BspANI GGCC 2 cut(s) 389, 1558
BspCNI CTCAG 6 cut(s) 155, 271, 361, 862, 1422, 1602
BspDI ATCGAT 2 cut(s) 432, 675
BspFNI CGCG 2 cut(s) 171, 442
BspLI GGNNCC 4 cut(s) 746, 784, 1101, 1174
BspPI GGATC 5 cut(s) 777, 790, 1144, 1193, 1403
BspT107I GGYRCC 1 cut(s) 1172
BspTI CTTAAG 1 cut(s) 1129
BspTNI GGTCTC 2 cut(s) 845, 1128
BsrDI GCAATG 1 cut(s) 837
BsrFI RCCGGY 1 cut(s) 385
BsrGI TGTACA 1 cut(s) 937
BsrI ACTGG 2 cut(s) 1530, 1568
BssAI RCCGGY 1 cut(s) 385
BssECI CCNNGG 1 cut(s) 777
BssSI CACGAG 2 cut(s) 880, 1352
BssT1I CCWWGG 1 cut(s) 777
Bst2BI CACGAG 2 cut(s) 880, 1352
Bst2UI CCWGG 3 cut(s) 391, 484, 1560
Bst4CI ACNGT 7 cut(s) 450, 613, 809, 839, 864, 1211, 1517
BstAFI CTTAAG 1 cut(s) 1129
BstAUI TGTACA 1 cut(s) 937
BstDEI CTNAG 9 cut(s) 142, 258, 348, 706, 826, 870, 1430, 1458, 1589
BstF5I GGATG 2 cut(s) 1266, 1325
BstFNI CGCG 2 cut(s) 171, 442
BstH2I RGCGCY 1 cut(s) 536
BstHHI GCGC 4 cut(s) 162, 442, 535, 643
BstMAI GTCTC 5 cut(s) 178, 845, 1128, 1362, 1683
BstMWI GCNNNNNNNGC 4 cut(s) 23, 168, 809, 1099
BstNI CCWGG 3 cut(s) 391, 484, 1560
BstNSI RCATGY 1 cut(s) 319
BstSCI CCNGG 5 cut(s) 389, 482, 546, 1315, 1558
BstSLI GKGCMC 1 cut(s) 1177
BstUI CGCG 2 cut(s) 171, 442
BstV1I GCAGC 1 cut(s) 476
BstV2I GAAGAC 1 cut(s) 1556
BstX2I RGATCY 4 cut(s) 782, 1049, 1198, 1395
BstXI CCANNNNNNTGG 1 cut(s) 1022
BstYI RGATCY 4 cut(s) 782, 1049, 1198, 1395
Bsu15I ATCGAT 2 cut(s) 432, 675
BsuRI GGCC 2 cut(s) 389, 1558
BsuTUI ATCGAT 2 cut(s) 432, 675
BtgZI GCGATG 1 cut(s) 152
BtsCI GGATG 2 cut(s) 1266, 1325
BtsI GCAGTG 1 cut(s) 305
BtsIMutI CAGTG 5 cut(s) 305, 814, 1216, 1522, 1575
CaiI CAGNNNCTG 2 cut(s) 1429, 1596
CfoI GCGC 4 cut(s) 162, 442, 535, 643
Cfr10I RCCGGY 1 cut(s) 385
ClaI ATCGAT 2 cut(s) 432, 675
CseI GACGC 1 cut(s) 160
Csp6I GTAC 6 cut(s) 614, 682, 730, 835, 938, 1109
CviAII CATG 2 cut(s) 254, 316
CviQI GTAC 6 cut(s) 614, 682, 730, 835, 938, 1109
DdeI CTNAG 9 cut(s) 142, 258, 348, 706, 826, 870, 1430, 1458, 1589
DraI TTTAAA 1 cut(s) 976
DrdI GACNNNNNNGTC 1 cut(s) 293
DseDI GACNNNNNNGTC 1 cut(s) 293
Eco130I CCWWGG 1 cut(s) 777
Eco147I AGGCCT 1 cut(s) 1558
Eco24I GRGCYC 1 cut(s) 374
Eco31I GGTCTC 2 cut(s) 845, 1128
Eco32I GATATC 1 cut(s) 1156
Eco47III AGCGCT 1 cut(s) 534
Eco88I CYCGRG 3 cut(s) 367, 644, 749
EcoRII CCWGG 3 cut(s) 389, 482, 1558
EcoRV GATATC 1 cut(s) 1156
EcoT14I CCWWGG 1 cut(s) 777
EcoT38I GRGCYC 1 cut(s) 374
ErhI CCWWGG 1 cut(s) 777
Esp3I CGTCTC 3 cut(s) 178, 1362, 1683
FaeI CATG 2 cut(s) 257, 319
FalI AAGNNNNNCTT 2 cut(s) 519, 551
FatI CATG 2 cut(s) 253, 315
FauNDI CATATG 1 cut(s) 1219
FbaI TGATCA 1 cut(s) 1059
FblI GTMKAC 2 cut(s) 147, 608
Fnu4HI GCNGC 2 cut(s) 15, 490
FokI GGATG 2 cut(s) 1273, 1332
FriOI GRGCYC 1 cut(s) 374
Fsp4HI GCNGC 2 cut(s) 15, 490
FspBI CTAG 1 cut(s) 1196
FspI TGCGCA 1 cut(s) 161
GlaI GCGC 4 cut(s) 161, 441, 534, 642
GluI GCNGC 2 cut(s) 15, 490
GsaI CCCAGC 1 cut(s) 426
GsuI CTGGAG 2 cut(s) 505, 1551
HaeII RGCGCY 1 cut(s) 536
HaeIII GGCC 2 cut(s) 389, 1558
HapII CCGG 3 cut(s) 386, 547, 1316
HgaI GACGC 1 cut(s) 160
HhaI GCGC 4 cut(s) 162, 442, 535, 643
Hin1II CATG 2 cut(s) 257, 319
Hin6I GCGC 4 cut(s) 160, 440, 533, 641
HinP1I GCGC 4 cut(s) 160, 440, 533, 641
HincII GTYRAC 1 cut(s) 609
HindII GTYRAC 1 cut(s) 609
HindIII AAGCTT 3 cut(s) 62, 801, 1634
HinfI GANTC 7 cut(s) 68, 262, 365, 1185, 1373, 1575, 1593
HpaII CCGG 3 cut(s) 386, 547, 1316
HphI GGTGA 1 cut(s) 1670
Hpy166II GTNNAC 7 cut(s) 106, 148, 600, 609, 664, 938, 1351
Hpy188I TCNGA 7 cut(s) 138, 261, 299, 587, 871, 1280, 1592
Hpy188III TCNNGA 7 cut(s) 179, 751, 1140, 1159, 1352, 1582, 1630
Hpy8I GTNNAC 7 cut(s) 106, 148, 600, 609, 664, 938, 1351
Hpy99I CGWCG 2 cut(s) 121, 458
HpyAV CCTTC 4 cut(s) 219, 370, 953, 1163
HpyCH4III ACNGT 7 cut(s) 450, 613, 809, 839, 864, 1211, 1517
HpyCH4IV ACGT 4 cut(s) 474, 507, 687, 1236
HpyCH4V TGCA 4 cut(s) 32, 556, 1423, 1707
HpyF10VI GCNNNNNNNGC 4 cut(s) 23, 168, 809, 1099
HpyF3I CTNAG 9 cut(s) 142, 258, 348, 706, 826, 870, 1430, 1458, 1589
HpySE526I ACGT 4 cut(s) 474, 507, 687, 1236
Hsp92II CATG 2 cut(s) 257, 319
HspAI GCGC 4 cut(s) 160, 440, 533, 641
Ksp22I TGATCA 1 cut(s) 1059
LmnI GCTCC 4 cut(s) 486, 744, 1099, 1214
Lsp1109I GCAGC 1 cut(s) 476
LweI GCATC 3 cut(s) 427, 543, 1094
MaeI CTAG 1 cut(s) 1196
MaeII ACGT 4 cut(s) 474, 507, 687, 1236
MaeIII GTNAC 3 cut(s) 884, 907, 1447
MboII GAAGA 7 cut(s) 194, 224, 257, 315, 1059, 1561, 1633
MflI RGATCY 4 cut(s) 782, 1049, 1198, 1395
MhlI GDGCHC 2 cut(s) 374, 1177
MluCI AATT 3 cut(s) 557, 992, 1650
MlyI GAGTC 2 cut(s) 359, 1179
MmeI TCCRAC 1 cut(s) 883
MroXI GAANNNNTTC 1 cut(s) 449
MseI TTAA 5 cut(s) 498, 975, 1130, 1305, 1479
MslI CAYNNNNRTG 1 cut(s) 725
MspCI CTTAAG 1 cut(s) 1129
MspI CCGG 3 cut(s) 386, 547, 1316
MspR9I CCNGG 5 cut(s) 391, 484, 548, 1317, 1560
Mva1269I GAATGC 3 cut(s) 578, 921, 1149
MvaI CCWGG 3 cut(s) 391, 484, 1560
MvnI CGCG 2 cut(s) 171, 442
MwoI GCNNNNNNNGC 4 cut(s) 23, 168, 809, 1099
NciI CCSGG 2 cut(s) 548, 1317
NdeI CATATG 1 cut(s) 1219
NlaIII CATG 2 cut(s) 257, 319
NlaIV GGNNCC 4 cut(s) 746, 784, 1101, 1174
NmeAIII GCCGAG 1 cut(s) 599
NmuCI GTSAC 2 cut(s) 884, 907
NsbI TGCGCA 1 cut(s) 161
NspI RCATGY 1 cut(s) 319
PaeR7I CTCGAG 2 cut(s) 644, 749
PceI AGGCCT 1 cut(s) 1558
PciI ACATGT 1 cut(s) 315
PcsI WCGNNNNNNNCGW 2 cut(s) 579, 672
PctI GAATGC 3 cut(s) 578, 921, 1149
PdmI GAANNNNTTC 1 cut(s) 449
PfeI GAWTC 5 cut(s) 68, 262, 1373, 1575, 1593
PflFI GACNNNGTC 1 cut(s) 701
PfoI TCCNGGA 3 cut(s) 482, 546, 1315
PkrI GCNGC 2 cut(s) 16, 491
PleI GAGTC 2 cut(s) 359, 1179
PpsI GAGTC 2 cut(s) 359, 1179
PscI ACATGT 1 cut(s) 315
PshBI ATTAAT 1 cut(s) 1305
Psp6I CCWGG 3 cut(s) 389, 482, 1558
PspFI CCCAGC 1 cut(s) 422
PspGI CCWGG 3 cut(s) 389, 482, 1558
PspN4I GGNNCC 4 cut(s) 746, 784, 1101, 1174
PspXI VCTCGAGB 1 cut(s) 644
PstNI CAGNNNCTG 2 cut(s) 1429, 1596
PsuI RGATCY 4 cut(s) 782, 1049, 1198, 1395
PsyI GACNNNGTC 1 cut(s) 701
RsaI GTAC 6 cut(s) 615, 683, 731, 836, 939, 1110
RsaNI GTAC 6 cut(s) 614, 682, 730, 835, 938, 1109
RseI CAYNNNNRTG 1 cut(s) 725
SalI GTCGAC 1 cut(s) 607
SaqAI TTAA 5 cut(s) 498, 975, 1130, 1305, 1479
SatI GCNGC 2 cut(s) 15, 490
SchI GAGTC 2 cut(s) 359, 1179
ScrFI CCNGG 5 cut(s) 391, 484, 548, 1317, 1560
SduI GDGCHC 2 cut(s) 374, 1177
SfaNI GCATC 3 cut(s) 427, 543, 1094
Sfr274I CTCGAG 2 cut(s) 644, 749
SlaI CTCGAG 2 cut(s) 644, 749
SmiMI CAYNNNNRTG 1 cut(s) 725
SmlI CTYRAG 5 cut(s) 337, 644, 749, 1129, 1178
SmoI CTYRAG 5 cut(s) 337, 644, 749, 1129, 1178
Sse9I AATT 3 cut(s) 557, 992, 1650
SseBI AGGCCT 1 cut(s) 1558
SsiI CCGC 4 cut(s) 14, 224, 442, 1134
SspMI CTAG 1 cut(s) 1196
StuI AGGCCT 1 cut(s) 1558
StyD4I CCNGG 5 cut(s) 389, 482, 546, 1315, 1558
StyI CCWWGG 1 cut(s) 777
TaaI ACNGT 7 cut(s) 450, 613, 809, 839, 864, 1211, 1517
TaiI ACGT 4 cut(s) 477, 510, 690, 1239
TasI AATT 3 cut(s) 557, 992, 1650
TatI WGTACW 3 cut(s) 613, 937, 1108
TauI GCSGC 1 cut(s) 17
TfiI GAWTC 5 cut(s) 68, 262, 1373, 1575, 1593
Tru1I TTAA 5 cut(s) 498, 975, 1130, 1305, 1479
Tru9I TTAA 5 cut(s) 498, 975, 1130, 1305, 1479
TscAI CASTG 5 cut(s) 312, 814, 1216, 1522, 1575
TseFI GTSAC 2 cut(s) 884, 907
TseI GCWGC 1 cut(s) 489
Tsp45I GTSAC 2 cut(s) 884, 907
TspDTI ATGAA 6 cut(s) 35, 176, 218, 1220, 1562, 1634
TspGWI ACGGA 3 cut(s) 143, 186, 1059
TspRI CASTG 5 cut(s) 312, 814, 1216, 1522, 1575
Tth111I GACNNNGTC 1 cut(s) 701
Vha464I CTTAAG 1 cut(s) 1129
VspI ATTAAT 1 cut(s) 1305
XapI RAATTY 1 cut(s) 992
XceI RCATGY 1 cut(s) 319
XhoI CTCGAG 2 cut(s) 644, 749
XmiI GTMKAC 2 cut(s) 147, 608
XmnI GAANNNNTTC 1 cut(s) 449
XspI CTAG 1 cut(s) 1196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.