Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0016646

Physical Location & Seq

Genomic Coordinates Reverse (-)

42302212 .. 42303927

Gene Structure 1716 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1309500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGCGAGCCTGCACAAAGACAAAGCTGATATCCTCCACGCACCCAACCCTCCATCTTTCCCATCCAACCCCCGAATCCTTCGTTTGGAACACCCTTATCCGAGCCCATGTCCAATCCACAGTCCTATCCCATCCTTCCCCACTGTCCGTCTTCCTCCGCATGCGCTTACACGGAGTCGAACCGGACGACCGCACCTTCCCTTTCCTCCTCCAGTCCTGCCATTCCCTCCCTCACATCCGGCCCGGAAAACAAATCCACGCCCAAGTTTTTCTCTTCGGGTTCACTGACGACCCGTTTGTCCGCACTTCTCTCATACATATGTACTCGTCCTGTGGGAGTTTGACGCTTGCCCGTCAAGTGTTTGATGAAATTACGCAACCGGACTTACCGTCTTGGAATTCGATTATGAATGCCTATTCGAAAGCGGGATTGATTGGTGATGCGAGAGAGGTGTTCGATAAAATGCCTGAGAGAAATGTGATCTCTTGGAGTTGTATGATAAAGGGGTACGTTGTGTGTGGTGCCTATAAGGACGCACTTGCCTTGTTTCGTGAGATGCAAAAGGTGGATGCTGGTGGCGTGAGGCCTAATGAGTTTACCATGTCGAGCGTGCTATTGGCTTGCGGACGGTTGGGTGCGCTTGAGCATGGAAAATGGGTTCATGCTTATATTGACAAATCGGGGATGCAAATTGATGTTGTCTTAGGAACTGCAATGGTGGACATGTATGCCAAATGTGGAAGTATTGAGAAAGCAAAAGTTGTTTTTGATAATATGGGTCCTTACAAGGATGTGATGGCATGGAGTTCAATGATTTCAGGACTGGCCATGCACGGACATGCTACAGAATGCCTTGAATTATTTTCTGAAATGATAAAGCTCGGCGTGAGGCCTAATGCTGTGACGTTTGTGGGTGTTCTTTGTGCTTGTGTACATGGAGGTTTGGTGAGTGAAGGGAAGGAGTACTTTAGGAGGATGGATGAGGAGTTTGGTATTAAGCCTTTGATCCAGCACTTTGGTTGTATTGTTGACCTGTATGGAAAAGCTGGTCTCGTTCGAGAGGCACTGAAGGTGGTGCAGTCCATGCCAATGGAGCCTGATGTTCTTGTATGGGGGGCTCTGCTCAGTGGCTCTAGGATGCATAGGGACATCGAAATGAGTGAGATTGCACTGAAGAATCTAATTCAGTTGGATCCCACGAATAGTGGTGCATATGTACTTTTGTCAAATGTGTACGCAAAGATGGGTAAATGGAGTGAAGTAAGGCGTGTGAGAGATCTCATGGAGGTAAAAGAGGTCAAGAAAGTCCCCGGTTGTAGTTTGGTTGAGGTAGGAGGTGTTCTTCATGAGTTTTTCGCGTGTGATGATTCGCATCCAGAAACTCGAGAGATATACATGATGCTTGACGAGATTATGAATAGGTTGAGAATGAAAGGCTTTGTAGGAAATACAAGTGAGGCGTTACTTGAACTAGATGAGGAAGGAAAGGAGTTGGCTTTGGCATACCATAGCGAAAAATTGGCAATTGCATTCTGCTTTTTGAAGACAAGTACAGGCACACCAATTCGAATTGTTAAAAACCTGAGGATATGCCGTGATTGTCATGATGCCATGAAGATGATTTCTGAGGAGTTTGGTCGGGAAATCGTGATCAGAGATTGCAACCGGTTTCACCATTTCAGGGAAGGACTATGCTCTTGTAAAGACTATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

572

Amino Acids

64.22

Weight (kDa)

6.76

Isoelectric Point (pI)

43.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	131 - 160	2.7e-07	PPR repeat
PPR_2	PF13041	158 - 208	3.6e-09	PPR repeat family
PPR	PF01535	161 - 188	9e-06	PPR repeat
PPR_2	PF13041	263 - 311	5.6e-10	PPR repeat family
PPR	PF01535	267 - 296	8.2e-07	PPR repeat
E_motif	PF20431	381 - 443	4.5e-22	E motif
Eplus_motif	PF20430	449 - 475	6e-07	E+ motif
DYW_deaminase	PF14432	479 - 571	2.3e-37	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0016646)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62890
fragaria_vesca	FvH4_2g25760
malus_domestica	MD11G1309500.v1.1
prunus_persica	Prupe.8G261800_v2.0.a1
pyrus_communis	pycom11g27060
rosa_chinensis	RchiOBHm_Chr6g0294051 RchiOBHm_Chr6g0294061
rosa_laevigata	RLG00000011903
rosa_multiflora	Rmu_sc0016897.1_g000002
rosa_roxburghii	Rroxscaffold_7G00173690
rosa_rugosa	Rorug06G0240600
rosa_samantha	Rh6BG360400 Rh6CG367600 Rh6DG354300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	296
AccB1I	GGYRCC	1 cut(s)	521
AccII	CGCG	1 cut(s)	1358
AciI	CCGC	5 cut(s)	157, 190, 301, 425, 624
AclWI	GGATC	3 cut(s)	1000, 1187, 1200
AcoI	YGGCCR	1 cut(s)	825
AcsI	RAATTY	1 cut(s)	397
AcuI	CTGAAG	2 cut(s)	1088, 1193
AfaI	GTAC	7 cut(s)	323, 509, 933, 965, 1218, 1235, 1552
AfiI	CCNNNNNNNGG	2 cut(s)	84, 1681
AflIII	ACRYGT	1 cut(s)	723
AgeI	ACCGGT	1 cut(s)	1665
AgsI	TTSAA	4 cut(s)	810, 857, 1469, 1543
AhdI	GACNNNNNGTC	1 cut(s)	388
AloI	GAACNNNNNNTCC	2 cut(s)	642, 674
AluBI	AGCT	3 cut(s)	25, 880, 1046
AluI	AGCT	3 cut(s)	25, 880, 1046
Alw26I	GTCTC	1 cut(s)	1055
AlwI	GGATC	3 cut(s)	1000, 1187, 1200
Ama87I	CYCGRG	1 cut(s)	1383
AoxI	GGCC	4 cut(s)	239, 584, 825, 890
ApoI	RAATTY	1 cut(s)	397
ArsI	GACNNNNNNTTYG	2 cut(s)	278, 310
AsiGI	ACCGGT	1 cut(s)	1665
AspLEI	GCGC	2 cut(s)	165, 640
AspS9I	GGNCC	2 cut(s)	240, 779
AsuC2I	CCSGG	2 cut(s)	243, 1311
AsuHPI	GGTGA	3 cut(s)	449, 958, 1664
AsuII	TTCGAA	2 cut(s)	419, 1567
AvaI	CYCGRG	1 cut(s)	1383
AvaII	GGWCC	1 cut(s)	779
AxyI	CCTNAGG	1 cut(s)	1583
BalI	TGGCCA	1 cut(s)	827
BamHI	GGATCC	1 cut(s)	1192
BanI	GGYRCC	1 cut(s)	521
BanII	GRGCYC	2 cut(s)	106, 1120
BbsI	GAAGAC	2 cut(s)	142, 1550
BccI	CCATC	6 cut(s)	60, 69, 138, 790, 970, 1237
BceAI	ACGGC	1 cut(s)	1578
BclI	TGATCA	1 cut(s)	1650
BcnI	CCSGG	2 cut(s)	243, 1311
BcoDI	GTCTC	1 cut(s)	1055
BfaI	CTAG	2 cut(s)	1134, 1472
BfmI	CTRYAG	1 cut(s)	843
BglII	AGATCT	1 cut(s)	1276
BmcAI	AGTACT	1 cut(s)	965
Bme1390I	CCNGG	2 cut(s)	243, 1311
Bme18I	GGWCC	1 cut(s)	779
BmeRI	GACNNNNNGTC	1 cut(s)	388
BmeT110I	CYCGRG	1 cut(s)	1383
BmgT120I	GGNCC	2 cut(s)	240, 779
BmiI	GGNNCC	4 cut(s)	523, 780, 1095, 1194
BmrFI	CCNGG	2 cut(s)	243, 1311
BmsI	GCATC	8 cut(s)	430, 546, 559, 675, 1128, 1381, 1389, 1597
BpiI	GAAGAC	2 cut(s)	142, 1550
BpmI	CTGGAG	1 cut(s)	194
Bpu14I	TTCGAA	2 cut(s)	419, 1567
BpuEI	CTTGAG	1 cut(s)	662
BpuMI	CCSGG	2 cut(s)	243, 1311
BsaBI	GATNNNNATC	1 cut(s)	1371
BsaI	GGTCTC	1 cut(s)	1055
BsaJI	CCNNGG	1 cut(s)	1309
BsaWI	WCCGGW	3 cut(s)	181, 379, 1665
BsaXI	ACNNNNNCTCC	2 cut(s)	930, 960
Bsc4I	CCNNNNNNNGG	2 cut(s)	84, 1681
Bse118I	RCCGGY	1 cut(s)	1665
Bse1I	ACTGG	2 cut(s)	211, 828
Bse21I	CCTNAGG	1 cut(s)	1583
Bse3DI	GCAATG	1 cut(s)	720
Bse8I	GATNNNNATC	1 cut(s)	1371
BseDI	CCNNGG	1 cut(s)	1309
BseJI	GATNNNNATC	1 cut(s)	1371
BseLI	CCNNNNNNNGG	2 cut(s)	84, 1681
BseMI	GCAATG	1 cut(s)	720
BseMII	CTCAG	4 cut(s)	459, 1138, 1574, 1617
BseNI	ACTGG	2 cut(s)	211, 828
BseRI	GAGGAG	3 cut(s)	197, 998, 1643
BsgI	GTGCAG	1 cut(s)	1097
Bsh1236I	CGCG	1 cut(s)	1358
Bsh1285I	CGRYCG	1 cut(s)	190
BshFI	GGCC	4 cut(s)	241, 586, 827, 892
BshNI	GGYRCC	1 cut(s)	521
BshTI	ACCGGT	1 cut(s)	1665
BsiEI	CGRYCG	1 cut(s)	190
BsiHKCI	CYCGRG	1 cut(s)	1383
BsiSI	CCGG	6 cut(s)	182, 238, 243, 380, 1311, 1666
BslFI	GGGAC	2 cut(s)	1160, 1292
BslI	CCNNNNNNNGG	2 cut(s)	84, 1681
BsmAI	GTCTC	1 cut(s)	1055
BsmFI	GGGAC	2 cut(s)	1160, 1292
BsmI	GAATGC	3 cut(s)	415, 854, 1529
BsnI	GGCC	4 cut(s)	241, 586, 827, 892
Bso31I	GGTCTC	1 cut(s)	1055
BsoBI	CYCGRG	1 cut(s)	1383
Bsp119I	TTCGAA	2 cut(s)	419, 1567
Bsp1286I	GDGCHC	2 cut(s)	106, 1120
Bsp1407I	TGTACA	1 cut(s)	931
Bsp143I	GATC	5 cut(s)	480, 1005, 1192, 1276, 1650
BspACI	CCGC	5 cut(s)	157, 190, 301, 425, 624
BspANI	GGCC	4 cut(s)	241, 586, 827, 892
BspCNI	CTCAG	4 cut(s)	460, 1137, 1575, 1618
BspFNI	CGCG	1 cut(s)	1358
BspHI	TCATGA	2 cut(s)	1345, 1603
BspLI	GGNNCC	4 cut(s)	523, 780, 1095, 1194
BspPI	GGATC	3 cut(s)	1000, 1187, 1200
BspT104I	TTCGAA	2 cut(s)	419, 1567
BspT107I	GGYRCC	1 cut(s)	521
BspTNI	GGTCTC	1 cut(s)	1055
BsrDI	GCAATG	1 cut(s)	720
BsrFI	RCCGGY	1 cut(s)	1665
BsrGI	TGTACA	1 cut(s)	931
BsrI	ACTGG	2 cut(s)	211, 828
BssAI	RCCGGY	1 cut(s)	1665
BssECI	CCNNGG	1 cut(s)	1309
BssMI	GATC	5 cut(s)	480, 1005, 1192, 1276, 1650
Bst4CI	ACNGT	4 cut(s)	121, 144, 390, 630
Bst6I	CTCTTC	1 cut(s)	278
BstAPI	GCANNNNNTGC	1 cut(s)	1084
BstAUI	TGTACA	1 cut(s)	931
BstBI	TTCGAA	2 cut(s)	419, 1567
BstC8I	GCNNGC	6 cut(s)	6, 10, 161, 348, 611, 622
BstDEI	CTNAG	5 cut(s)	468, 703, 1124, 1583, 1626
BstFNI	CGCG	1 cut(s)	1358
BstHHI	GCGC	2 cut(s)	165, 640
BstKTI	GATC	5 cut(s)	483, 1008, 1195, 1279, 1653
BstMAI	GTCTC	1 cut(s)	1055
BstMBI	GATC	5 cut(s)	480, 1005, 1192, 1276, 1650
BstMCI	CGRYCG	1 cut(s)	190
BstMWI	GCNNNNNNNGC	2 cut(s)	1084, 1093
BstNSI	RCATGY	3 cut(s)	163, 727, 842
BstSCI	CCNGG	2 cut(s)	241, 1309
BstSFI	CTRYAG	1 cut(s)	843
BstUI	CGCG	1 cut(s)	1358
BstV2I	GAAGAC	2 cut(s)	142, 1550
BstX2I	RGATCY	2 cut(s)	1192, 1276
BstXI	CCANNNNNNTGG	2 cut(s)	1016, 1090
BstYI	RGATCY	2 cut(s)	1192, 1276
Bsu36I	CCTNAGG	1 cut(s)	1583
BsuRI	GGCC	4 cut(s)	241, 586, 827, 892
BtsIMutI	CAGTG	5 cut(s)	140, 282, 1064, 1132, 1169
Cac8I	GCNNGC	6 cut(s)	6, 10, 161, 348, 611, 622
CciI	TCATGA	2 cut(s)	1345, 1603
CfoI	GCGC	2 cut(s)	165, 640
Cfr10I	RCCGGY	1 cut(s)	1665
Cfr13I	GGNCC	2 cut(s)	240, 779
CseI	GACGC	2 cut(s)	352, 542
Csp6I	GTAC	7 cut(s)	322, 508, 932, 964, 1217, 1234, 1551
CspAI	ACCGGT	1 cut(s)	1665
CviQI	GTAC	7 cut(s)	322, 508, 932, 964, 1217, 1234, 1551
DdeI	CTNAG	5 cut(s)	468, 703, 1124, 1583, 1626
DpnI	GATC	5 cut(s)	482, 1007, 1194, 1278, 1652
DpnII	GATC	5 cut(s)	480, 1005, 1192, 1276, 1650
DrdI	GACNNNNNNGTC	1 cut(s)	296
DriI	GACNNNNNGTC	1 cut(s)	388
DseDI	GACNNNNNNGTC	1 cut(s)	296
EaeI	YGGCCR	1 cut(s)	825
Eam1104I	CTCTTC	1 cut(s)	278
Eam1105I	GACNNNNNGTC	1 cut(s)	388
EarI	CTCTTC	1 cut(s)	278
Eco147I	AGGCCT	2 cut(s)	586, 892
Eco24I	GRGCYC	2 cut(s)	106, 1120
Eco31I	GGTCTC	1 cut(s)	1055
Eco32I	GATATC	1 cut(s)	30
Eco47I	GGWCC	1 cut(s)	779
Eco57I	CTGAAG	2 cut(s)	1088, 1193
Eco81I	CCTNAGG	1 cut(s)	1583
Eco88I	CYCGRG	1 cut(s)	1383
EcoO109I	RGGNCCY	1 cut(s)	779
EcoRI	GAATTC	1 cut(s)	397
EcoRV	GATATC	1 cut(s)	30
EcoT22I	ATGCAT	1 cut(s)	1143
EcoT38I	GRGCYC	2 cut(s)	106, 1120
FalI	AAGNNNNNCTT	2 cut(s)	950, 982
FaqI	GGGAC	2 cut(s)	1160, 1292
FauI	CCCGC	1 cut(s)	418
FauNDI	CATATG	2 cut(s)	318, 1213
FbaI	TGATCA	1 cut(s)	1650
FriOI	GRGCYC	2 cut(s)	106, 1120
FspBI	CTAG	2 cut(s)	1134, 1472
GlaI	GCGC	2 cut(s)	164, 639
GsuI	CTGGAG	1 cut(s)	194
HaeIII	GGCC	4 cut(s)	241, 586, 827, 892
HapII	CCGG	6 cut(s)	182, 238, 243, 380, 1311, 1666
HgaI	GACGC	2 cut(s)	352, 542
HhaI	GCGC	2 cut(s)	165, 640
Hin6I	GCGC	2 cut(s)	163, 638
HinP1I	GCGC	2 cut(s)	163, 638
HincII	GTYRAC	1 cut(s)	1030
HindII	GTYRAC	1 cut(s)	1030
HinfI	GANTC	4 cut(s)	74, 174, 1177, 1367
HpaII	CCGG	6 cut(s)	182, 238, 243, 380, 1311, 1666
HphI	GGTGA	3 cut(s)	449, 958, 1664
Hpy166II	GTNNAC	6 cut(s)	282, 597, 721, 932, 1030, 1234
Hpy188I	TCNGA	4 cut(s)	101, 868, 1627, 1655
Hpy8I	GTNNAC	6 cut(s)	282, 597, 721, 932, 1030, 1234
HpyAV	CCTTC	8 cut(s)	88, 144, 205, 947, 952, 1063, 1475, 1679
HpyCH4III	ACNGT	4 cut(s)	121, 144, 390, 630
HpyCH4IV	ACGT	2 cut(s)	510, 905
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1084, 1093
HpyF3I	CTNAG	5 cut(s)	468, 703, 1124, 1583, 1626
HpySE526I	ACGT	2 cut(s)	510, 905
HspAI	GCGC	2 cut(s)	163, 638
Ksp22I	TGATCA	1 cut(s)	1650
Kzo9I	GATC	5 cut(s)	480, 1005, 1192, 1276, 1650
LmnI	GCTCC	1 cut(s)	1093
LweI	GCATC	8 cut(s)	430, 546, 559, 675, 1128, 1381, 1389, 1597
MaeI	CTAG	2 cut(s)	1134, 1472
MaeII	ACGT	2 cut(s)	510, 905
MaeIII	GTNAC	2 cut(s)	901, 1461
MalI	GATC	5 cut(s)	482, 1007, 1194, 1278, 1652
MboI	GATC	5 cut(s)	480, 1005, 1192, 1276, 1650
MboII	GAAGA	6 cut(s)	142, 265, 1186, 1334, 1555, 1627
MfeI	CAATTG	1 cut(s)	1524
MflI	RGATCY	2 cut(s)	1192, 1276
MhlI	GDGCHC	2 cut(s)	106, 1120
MlsI	TGGCCA	1 cut(s)	827
MluCI	AATT	9 cut(s)	369, 397, 690, 857, 1182, 1517, 1524, 1563, 1569
MluNI	TGGCCA	1 cut(s)	827
MlyI	GAGTC	1 cut(s)	183
MmeI	TCCRAC	2 cut(s)	89, 1170
Mox20I	TGGCCA	1 cut(s)	827
Mph1103I	ATGCAT	1 cut(s)	1143
MscI	TGGCCA	1 cut(s)	827
MseI	TTAA	2 cut(s)	996, 1575
MslI	CAYNNNNRTG	5 cut(s)	317, 837, 1088, 1154, 1616
Msp20I	TGGCCA	1 cut(s)	827
MspI	CCGG	6 cut(s)	182, 238, 243, 380, 1311, 1666
MspR9I	CCNGG	2 cut(s)	243, 1311
MunI	CAATTG	1 cut(s)	1524
Mva1269I	GAATGC	3 cut(s)	415, 854, 1529
MvnI	CGCG	1 cut(s)	1358
MwoI	GCNNNNNNNGC	2 cut(s)	1084, 1093
NciI	CCSGG	2 cut(s)	243, 1311
NdeI	CATATG	2 cut(s)	318, 1213
NdeII	GATC	5 cut(s)	480, 1005, 1192, 1276, 1650
NlaIV	GGNNCC	4 cut(s)	523, 780, 1095, 1194
NmeAIII	GCCGAG	1 cut(s)	861
NmuCI	GTSAC	1 cut(s)	901
NsiI	ATGCAT	1 cut(s)	1143
NspI	RCATGY	3 cut(s)	163, 727, 842
NspV	TTCGAA	2 cut(s)	419, 1567
PaeI	GCATGC	1 cut(s)	163
PaeR7I	CTCGAG	1 cut(s)	1383
PagI	TCATGA	2 cut(s)	1345, 1603
PceI	AGGCCT	2 cut(s)	586, 892
PciI	ACATGT	1 cut(s)	723
PcsI	WCGNNNNNNNCGW	1 cut(s)	183
PctI	GAATGC	3 cut(s)	415, 854, 1529
PfeI	GAWTC	3 cut(s)	74, 1177, 1367
PinAI	ACCGGT	1 cut(s)	1665
PleI	GAGTC	1 cut(s)	182
PpsI	GAGTC	1 cut(s)	182
PpuMI	RGGWCCY	1 cut(s)	779
PscI	ACATGT	1 cut(s)	723
Psp5II	RGGWCCY	1 cut(s)	779
PspN4I	GGNNCC	4 cut(s)	523, 780, 1095, 1194
PspPI	GGNCC	2 cut(s)	240, 779
PspPPI	RGGWCCY	1 cut(s)	779
PsrI	GAACNNNNNNTAC	2 cut(s)	1323, 1355
PsuI	RGATCY	2 cut(s)	1192, 1276
RsaI	GTAC	7 cut(s)	323, 509, 933, 965, 1218, 1235, 1552
RsaNI	GTAC	7 cut(s)	322, 508, 932, 964, 1217, 1234, 1551
RseI	CAYNNNNRTG	5 cut(s)	317, 837, 1088, 1154, 1616
SaqAI	TTAA	2 cut(s)	996, 1575
Sau3AI	GATC	5 cut(s)	480, 1005, 1192, 1276, 1650
Sau96I	GGNCC	2 cut(s)	240, 779
ScaI	AGTACT	1 cut(s)	965
SchI	GAGTC	1 cut(s)	183
ScrFI	CCNGG	2 cut(s)	243, 1311
SduI	GDGCHC	2 cut(s)	106, 1120
SfaNI	GCATC	8 cut(s)	430, 546, 559, 675, 1128, 1381, 1389, 1597
SfcI	CTRYAG	1 cut(s)	843
Sfr274I	CTCGAG	1 cut(s)	1383
SfuI	TTCGAA	2 cut(s)	419, 1567
SinI	GGWCC	1 cut(s)	779
SlaI	CTCGAG	1 cut(s)	1383
SmiMI	CAYNNNNRTG	5 cut(s)	317, 837, 1088, 1154, 1616
SmlI	CTYRAG	2 cut(s)	641, 1383
SmoI	CTYRAG	2 cut(s)	641, 1383
SphI	GCATGC	1 cut(s)	163
Sse9I	AATT	9 cut(s)	369, 397, 690, 857, 1182, 1517, 1524, 1563, 1569
SseBI	AGGCCT	2 cut(s)	586, 892
SsiI	CCGC	5 cut(s)	157, 190, 301, 425, 624
SspMI	CTAG	2 cut(s)	1134, 1472
StuI	AGGCCT	2 cut(s)	586, 892
StyD4I	CCNGG	2 cut(s)	241, 1309
TaaI	ACNGT	4 cut(s)	121, 144, 390, 630
TaiI	ACGT	2 cut(s)	513, 908
TaqI	TCGA	9 cut(s)	177, 401, 419, 456, 605, 1057, 1152, 1384, 1567
TasI	AATT	9 cut(s)	369, 397, 690, 857, 1182, 1517, 1524, 1563, 1569
TatI	WGTACW	5 cut(s)	321, 931, 963, 1216, 1550
TfiI	GAWTC	3 cut(s)	74, 1177, 1367
Tru1I	TTAA	2 cut(s)	996, 1575
Tru9I	TTAA	2 cut(s)	996, 1575
TscAI	CASTG	5 cut(s)	147, 289, 1071, 1132, 1176
TseFI	GTSAC	1 cut(s)	901
Tsp45I	GTSAC	1 cut(s)	901
TspDTI	ATGAA	7 cut(s)	381, 422, 650, 1334, 1430, 1445, 1628
TspGWI	ACGGA	3 cut(s)	136, 186, 849
TspRI	CASTG	5 cut(s)	147, 289, 1071, 1132, 1176
VpaK11BI	GGWCC	1 cut(s)	779
XapI	RAATTY	1 cut(s)	397
XceI	RCATGY	3 cut(s)	163, 727, 842
XhoI	CTCGAG	1 cut(s)	1383
XspI	CTAG	2 cut(s)	1134, 1472
ZrmI	AGTACT	1 cut(s)	965
Zsp2I	ATGCAT	1 cut(s)	1143

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.