Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009825

Physical Location & Seq

Genomic Coordinates Forward (+)

23384988 .. 23387842

Gene Structure 2855 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G63300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1497 bp

ATGGAGAGAGAACTCAGACGACCGAACCCAATCAACAGCTCTCGCCGGCCGGAGATATTTTCTTCAGGCGGTAGTAGTACTCAACTACCGGAAAGCCCACGAGGCCCAATGGAGTTCTTGTCTAGATCCTGGAGTGTCTCTGCCTTGGAAGTCTCCAGAGCTCTCCACACCGCCAAATCAGCTTCAGCCACCAACAGGCCTCCCTCATCCATTAACACTCCGATACCGGAAGAAACGCTAAACCCTGAGAAAGAAGAATGTCCGCCGGAGAACAGTACTAGTGTTAGTAGCCAGTTCTCGTTCGCTGCCTCGGCCACTTCACAGCTTGTTCTTGAGCGCATAATGTCTCAATCGGAGGTGTCACCGTTAACGTCGGGGAGGCTATCACACAGCAGCGGCCCACTCAACGGCGGCGGTTCTTTTACGGAGACAGACAGTCCTCCTATCTCCCCTTCCGATGAATTCGACGACGTCATCAAGTATTTTCGCACCCACAACACCATACATCCTCTCTTCTCCGGCACAGGAGGCAGCCGTGGTACCACCGGAAATGGGAGCAATACCCCCATGGCTGGAACCGGTCCAAAGACAGTTGGTAGGTGGCTCAAGGACCGTAAGGAAAAGAAGAAAGAAGAGACTAGGACTCAGAATGCACAGGTTCACGCAGCTGTTTCTGTTGCAGCGGTTGCATCTGCTGTGGCAGCTGTAGCAGCAGCCACAGCAGCTTCTTCCCCTGGTAAGAACGAGCAGATGGCCAGAATCGATATGGCCATGGCTTCAGCGGCTGCTCTGGTGGCTGCTCAGTGTGTGGAGGCTGCAGAAATCATGGGAGCAGATAGGGATCATTTGACATCCGTGGTGAGCTCTGCCGTGAATGTTAAGTCCCATGACGATATTGTCACCCTTACTGCAGCTGCTGCAACAGCTCTGCGAGGAGCAGCTACACTCAAGGCAAGAGCGCTTAAGGAAGTATGGAACATAGCTGCAGTATTGCCAGCCGAGAAAGGGGCAAGTTCAGCGTTGTGTGGACAGGTTGACACAAAGCATAGTGATAGCAGCTTTAGTGGAGAATTACCTGTGGCTGGGGAAGACTTCCTTGGCGTCTGTAACCAGGAATTACTAGCTAAAGGCACTGAGCTCCTCAAACGAACTCGTGGAGGTGAACTCCACTGGAAGATTGTCTCTGTCTACATCAACAAAGCAGGCCAAGCTGTGCTGAAAATGAAAAGTAAACACGTTGGAGGGACCTTCACAAAGAAGAAGAAACATATGGTGCTTGAAGTGAGAAAGGATATACCTGCATGGGCTGGCAGAGATCTTTTCAACGGAGACAAGCATCACTACTTTGGCTTAAAGACAGAAACAAAGAGGGTCATTGAATTTGAGTGCAGAAACCAAAGGGAATACGAGATATGGACTCAGGGCGTATCCAGGCTACTTGCCATTGCTGCTGAGAAGAAGCAGAAAAGTTCCATGTCCAAATGGATGGCACCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009888 GO:0009987 GO:0010033 GO:0010051 GO:0010087 GO:0010305 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_canalis PH_2

Protein Analysis

498

Amino Acids

53.33

Weight (kDa)

9.25

Isoelectric Point (pI)

44.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Auxin_canalis	PF05703	2 - 178	1.1e-77	Auxin canalisation
PH_2	PF08458	221 - 325	6.9e-41	Plant pleckstrin homology-like region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009825)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63300 AT3G63300
fragaria_vesca	FvH4_2g23080
malus_domestica	MD03G1259300.v1.1 MD11G1279900.v1.1
prunus_persica	Prupe.8G235800_v2.0.a1 Prupe.8G235800_v2.0.a1
pyrus_communis	pycom03g20730 pycom11g24760
rosa_chinensis	RchiOBHm_Chr6g0290221
rosa_laevigata	RLG00000012233
rosa_multiflora	Rmu_co8342515.1_g000001 Rmu_sc0002902.1_g000011 Rmu_sc0024712.1_g000001
rosa_roxburghii	Rroxscaffold_7G00177230
rosa_rugosa	Rorug06G0211000.1
rosa_samantha	Rh6AG321300 Rh6BG328400 Rh6CG334400 Rh6DG321400
rosa_wichuraiana	Rw6G027750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	896
AatII	GACGTC	1 cut(s)	474
Acc36I	ACCTGC	1 cut(s)	1306
Acc65I	GGTACC	1 cut(s)	539
AccB1I	GGYRCC	2 cut(s)	539, 1489
AccI	GTMKAC	1 cut(s)	1188
AciI	CCGC	8 cut(s)	69, 171, 263, 396, 411, 414, 683, 782
AclWI	GGATC	2 cut(s)	120, 849
AcoI	YGGCCR	4 cut(s)	47, 312, 753, 768
AcsI	RAATTY	2 cut(s)	461, 1379
AcuI	CTGAAG	3 cut(s)	48, 168, 762
AcyI	GRCGYC	2 cut(s)	471, 1101
AfaI	GTAC	3 cut(s)	79, 277, 541
AfeI	AGCGCT	1 cut(s)	960
AfiI	CCNNNNNNNGG	6 cut(s)	195, 407, 552, 572, 1005, 1082
AflII	CTTAAG	1 cut(s)	962
AflIII	ACRYGT	1 cut(s)	1234
AgeI	ACCGGT	1 cut(s)	578
AgsI	TTSAA	3 cut(s)	1280, 1324, 1379
AhdI	GACNNNNNGTC	1 cut(s)	435
AhlI	ACTAGT	1 cut(s)	278
AjnI	CCWGG	4 cut(s)	128, 733, 1110, 1430
AjuI	GAANNNNNNNTTGG	2 cut(s)	1080, 1112
Alw21I	GWGCWC	3 cut(s)	163, 866, 1140
Alw26I	GTCTC	7 cut(s)	142, 157, 351, 422, 629, 1186, 1323
AlwI	GGATC	2 cut(s)	120, 849
AlwNI	CAGNNNCTG	2 cut(s)	785, 917
Aor51HI	AGCGCT	1 cut(s)	960
AoxI	GGCC	8 cut(s)	47, 103, 197, 312, 397, 753, 768, 1204
ApoI	RAATTY	2 cut(s)	461, 1379
AsiGI	ACCGGT	1 cut(s)	578
Asp718I	GGTACC	1 cut(s)	539
AspLEI	GCGC	2 cut(s)	339, 961
AspS9I	GGNCC	5 cut(s)	104, 398, 581, 610, 1245
AsuHPI	GGTGA	4 cut(s)	354, 871, 892, 1172
AvaII	GGWCC	3 cut(s)	581, 610, 1245
BalI	TGGCCA	2 cut(s)	755, 770
BanI	GGYRCC	2 cut(s)	539, 1489
BanII	GRGCYC	3 cut(s)	163, 866, 1140
BauI	CACGAG	2 cut(s)	99, 1152
BbsI	GAAGAC	1 cut(s)	1095
Bbv12I	GWGCWC	3 cut(s)	163, 866, 1140
BccI	CCATC	2 cut(s)	745, 1480
BceAI	ACGGC	3 cut(s)	424, 519, 854
BciT130I	CCWGG	4 cut(s)	130, 735, 1112, 1432
BciVI	GTATCC	1 cut(s)	1438
BcoDI	GTCTC	7 cut(s)	142, 157, 351, 422, 629, 1186, 1323
BcuI	ACTAGT	1 cut(s)	278
BfaI	CTAG	4 cut(s)	123, 279, 639, 1121
BfmI	CTRYAG	4 cut(s)	705, 816, 909, 984
BfoI	RGCGCY	1 cut(s)	962
BfrI	CTTAAG	1 cut(s)	962
BfuAI	ACCTGC	1 cut(s)	1306
BfuI	GTATCC	1 cut(s)	1438
BglI	GCCNNNNNGGC	1 cut(s)	102
BglII	AGATCT	1 cut(s)	1315
BmcAI	AGTACT	2 cut(s)	79, 277
Bme1390I	CCNGG	4 cut(s)	130, 735, 1112, 1432
Bme18I	GGWCC	3 cut(s)	581, 610, 1245
BmeRI	GACNNNNNGTC	1 cut(s)	435
BmgT120I	GGNCC	5 cut(s)	104, 398, 581, 610, 1245
BmiI	GGNNCC	4 cut(s)	541, 577, 1246, 1491
BmrFI	CCNGG	4 cut(s)	130, 735, 1112, 1432
BmsI	GCATC	2 cut(s)	698, 1345
BpiI	GAAGAC	1 cut(s)	1095
BplI	GAGNNNNNCTC	2 cut(s)	1149, 1181
BpmI	CTGGAG	2 cut(s)	139, 151
BpuEI	CTTGAG	3 cut(s)	353, 590, 932
Bsa29I	ATCGAT	1 cut(s)	762
BsaBI	GATNNNNATC	1 cut(s)	840
BsaHI	GRCGYC	2 cut(s)	471, 1101
BsaJI	CCNNGG	8 cut(s)	144, 309, 535, 567, 733, 771, 855, 1096
BsaWI	WCCGGW	4 cut(s)	88, 226, 545, 578
BsaXI	ACNNNNNCTCC	2 cut(s)	104, 134
Bsc4I	CCNNNNNNNGG	6 cut(s)	195, 407, 552, 572, 1005, 1082
Bse118I	RCCGGY	2 cut(s)	45, 578
Bse1I	ACTGG	2 cut(s)	292, 1175
Bse3DI	GCAATG	1 cut(s)	1443
Bse8I	GATNNNNATC	1 cut(s)	840
BseBI	CCWGG	4 cut(s)	130, 735, 1112, 1432
BseCI	ATCGAT	1 cut(s)	762
BseDI	CCNNGG	8 cut(s)	144, 309, 535, 567, 733, 771, 855, 1096
BseGI	GGATG	4 cut(s)	206, 505, 851, 1491
BseJI	GATNNNNATC	1 cut(s)	840
BseLI	CCNNNNNNNGG	6 cut(s)	195, 407, 552, 572, 1005, 1082
BseMI	GCAATG	1 cut(s)	1443
BseMII	CTCAG	7 cut(s)	28, 237, 659, 815, 1125, 1433, 1443
BseNI	ACTGG	2 cut(s)	292, 1175
BseRI	GAGGAG	2 cut(s)	948, 1130
BseX3I	CGGCCG	1 cut(s)	47
BseYI	CCCAGC	1 cut(s)	1082
BsgI	GTGCAG	1 cut(s)	1408
Bsh1285I	CGRYCG	2 cut(s)	23, 50
BshFI	GGCC	8 cut(s)	49, 105, 199, 314, 399, 755, 770, 1206
BshNI	GGYRCC	2 cut(s)	539, 1489
BshTI	ACCGGT	1 cut(s)	578
BshVI	ATCGAT	1 cut(s)	762
BsiEI	CGRYCG	2 cut(s)	23, 50
BsiHKAI	GWGCWC	3 cut(s)	163, 866, 1140
BsiSI	CCGG	8 cut(s)	46, 50, 89, 227, 266, 519, 546, 579
BslFI	GGGAC	2 cut(s)	868, 1258
BslI	CCNNNNNNNGG	6 cut(s)	195, 407, 552, 572, 1005, 1082
BsmAI	GTCTC	7 cut(s)	142, 157, 351, 422, 629, 1186, 1323
BsmFI	GGGAC	2 cut(s)	868, 1258
BsmI	GAATGC	1 cut(s)	655
BsnI	GGCC	8 cut(s)	49, 105, 199, 314, 399, 755, 770, 1206
Bsp1286I	GDGCHC	3 cut(s)	163, 866, 1140
Bsp143I	GATC	3 cut(s)	125, 841, 1315
Bsp19I	CCATGG	2 cut(s)	567, 771
BspACI	CCGC	8 cut(s)	69, 171, 263, 396, 411, 414, 683, 782
BspANI	GGCC	8 cut(s)	49, 105, 199, 314, 399, 755, 770, 1206
BspCNI	CTCAG	7 cut(s)	27, 238, 658, 814, 1126, 1432, 1444
BspDI	ATCGAT	1 cut(s)	762
BspLI	GGNNCC	4 cut(s)	541, 577, 1246, 1491
BspMAI	CTGCAG	3 cut(s)	820, 913, 988
BspMI	ACCTGC	1 cut(s)	1306
BspPI	GGATC	2 cut(s)	120, 849
BspT107I	GGYRCC	2 cut(s)	539, 1489
BspTI	CTTAAG	1 cut(s)	962
BsrDI	GCAATG	1 cut(s)	1443
BsrFI	RCCGGY	2 cut(s)	45, 578
BsrI	ACTGG	2 cut(s)	292, 1175
BssAI	RCCGGY	2 cut(s)	45, 578
BssECI	CCNNGG	8 cut(s)	144, 309, 535, 567, 733, 771, 855, 1096
BssMI	GATC	3 cut(s)	125, 841, 1315
BssNI	GRCGYC	2 cut(s)	471, 1101
BssSI	CACGAG	2 cut(s)	99, 1152
BssT1I	CCWWGG	4 cut(s)	144, 567, 771, 1096
Bst2BI	CACGAG	2 cut(s)	99, 1152
Bst2UI	CCWGG	4 cut(s)	130, 735, 1112, 1432
Bst4CI	ACNGT	5 cut(s)	275, 366, 437, 592, 614
Bst6I	CTCTTC	2 cut(s)	518, 627
BstACI	GRCGYC	2 cut(s)	471, 1101
BstAFI	CTTAAG	1 cut(s)	962
BstAPI	GCANNNNNTGC	2 cut(s)	686, 917
BstC8I	GCNNGC	4 cut(s)	47, 996, 1204, 1309
BstDEI	CTNAG	7 cut(s)	14, 246, 645, 801, 1134, 1419, 1452
BstDSI	CCRYGG	4 cut(s)	535, 567, 771, 855
BstF5I	GGATG	4 cut(s)	206, 505, 851, 1491
BstH2I	RGCGCY	1 cut(s)	962
BstHHI	GCGC	2 cut(s)	339, 961
BstKTI	GATC	3 cut(s)	128, 844, 1318
BstMAI	GTCTC	7 cut(s)	142, 157, 351, 422, 629, 1186, 1323
BstMBI	GATC	3 cut(s)	125, 841, 1315
BstMCI	CGRYCG	2 cut(s)	23, 50
BstNI	CCWGG	4 cut(s)	130, 735, 1112, 1432
BstSCI	CCNGG	4 cut(s)	128, 733, 1110, 1430
BstSFI	CTRYAG	4 cut(s)	705, 816, 909, 984
BstV2I	GAAGAC	1 cut(s)	1095
BstX2I	RGATCY	2 cut(s)	125, 1315
BstXI	CCANNNNNNTGG	1 cut(s)	1486
BstYI	RGATCY	2 cut(s)	125, 1315
BstZI	CGGCCG	1 cut(s)	47
Bsu15I	ATCGAT	1 cut(s)	762
BsuI	GTATCC	1 cut(s)	1438
BsuRI	GGCC	8 cut(s)	49, 105, 199, 314, 399, 755, 770, 1206
BsuTUI	ATCGAT	1 cut(s)	762
BtgI	CCRYGG	4 cut(s)	535, 567, 771, 855
BtsCI	GGATG	4 cut(s)	206, 505, 851, 1491
BtsIMutI	CAGTG	3 cut(s)	809, 1131, 1168
BveI	ACCTGC	1 cut(s)	1306
Cac8I	GCNNGC	4 cut(s)	47, 996, 1204, 1309
CaiI	CAGNNNCTG	2 cut(s)	785, 917
CfoI	GCGC	2 cut(s)	339, 961
Cfr10I	RCCGGY	2 cut(s)	45, 578
Cfr13I	GGNCC	5 cut(s)	104, 398, 581, 610, 1245
ClaI	ATCGAT	1 cut(s)	762
CseI	GACGC	1 cut(s)	1090
Csp6I	GTAC	3 cut(s)	78, 276, 540
CspAI	ACCGGT	1 cut(s)	578
CviAII	CATG	6 cut(s)	568, 772, 826, 887, 1302, 1474
CviQI	GTAC	3 cut(s)	78, 276, 540
DdeI	CTNAG	7 cut(s)	14, 246, 645, 801, 1134, 1419, 1452
DpnI	GATC	3 cut(s)	127, 843, 1317
DpnII	GATC	3 cut(s)	125, 841, 1315
DrdI	GACNNNNNNGTC	1 cut(s)	896
DriI	GACNNNNNGTC	1 cut(s)	435
DseDI	GACNNNNNNGTC	1 cut(s)	896
EaeI	YGGCCR	4 cut(s)	47, 312, 753, 768
EagI	CGGCCG	1 cut(s)	47
Eam1104I	CTCTTC	2 cut(s)	518, 627
Eam1105I	GACNNNNNGTC	1 cut(s)	435
EarI	CTCTTC	2 cut(s)	518, 627
EciI	GGCGGA	1 cut(s)	252
Ecl136II	GAGCTC	3 cut(s)	161, 864, 1138
EclXI	CGGCCG	1 cut(s)	47
Eco130I	CCWWGG	4 cut(s)	144, 567, 771, 1096
Eco147I	AGGCCT	1 cut(s)	199
Eco24I	GRGCYC	3 cut(s)	163, 866, 1140
Eco47I	GGWCC	3 cut(s)	581, 610, 1245
Eco47III	AGCGCT	1 cut(s)	960
Eco52I	CGGCCG	1 cut(s)	47
Eco53kI	GAGCTC	3 cut(s)	161, 864, 1138
Eco57I	CTGAAG	3 cut(s)	48, 168, 762
EcoICRI	GAGCTC	3 cut(s)	161, 864, 1138
EcoO109I	RGGNCCY	1 cut(s)	1245
EcoRI	GAATTC	1 cut(s)	461
EcoRII	CCWGG	4 cut(s)	128, 733, 1110, 1430
EcoT14I	CCWWGG	4 cut(s)	144, 567, 771, 1096
EcoT38I	GRGCYC	3 cut(s)	163, 866, 1140
ErhI	CCWWGG	4 cut(s)	144, 567, 771, 1096
FaeI	CATG	6 cut(s)	571, 775, 829, 890, 1305, 1477
FalI	AAGNNNNNCTT	2 cut(s)	1080, 1112
FaqI	GGGAC	2 cut(s)	868, 1258
FatI	CATG	6 cut(s)	567, 771, 825, 886, 1301, 1473
FauNDI	CATATG	1 cut(s)	1269
FblI	GTMKAC	1 cut(s)	1188
FokI	GGATG	3 cut(s)	193, 492, 838
FriOI	GRGCYC	3 cut(s)	163, 866, 1140
FspBI	CTAG	4 cut(s)	123, 279, 639, 1121
GlaI	GCGC	2 cut(s)	338, 960
GsaI	CCCAGC	1 cut(s)	1086
GsuI	CTGGAG	2 cut(s)	139, 151
HaeII	RGCGCY	1 cut(s)	962
HaeIII	GGCC	8 cut(s)	49, 105, 199, 314, 399, 755, 770, 1206
HapII	CCGG	8 cut(s)	46, 50, 89, 227, 266, 519, 546, 579
HgaI	GACGC	1 cut(s)	1090
HhaI	GCGC	2 cut(s)	339, 961
Hin1I	GRCGYC	2 cut(s)	471, 1101
Hin1II	CATG	6 cut(s)	571, 775, 829, 890, 1305, 1477
Hin6I	GCGC	2 cut(s)	337, 959
HinP1I	GCGC	2 cut(s)	337, 959
HincII	GTYRAC	2 cut(s)	369, 1036
HindII	GTYRAC	2 cut(s)	369, 1036
HinfI	GANTC	3 cut(s)	643, 759, 1417
HpaI	GTTAAC	1 cut(s)	369
HpaII	CCGG	8 cut(s)	46, 50, 89, 227, 266, 519, 546, 579
HphI	GGTGA	4 cut(s)	354, 871, 892, 1172
Hpy166II	GTNNAC	7 cut(s)	369, 661, 1028, 1036, 1163, 1189, 1232
Hpy188I	TCNGA	5 cut(s)	17, 222, 355, 457, 648
Hpy188III	TCNNGA	3 cut(s)	123, 156, 332
Hpy8I	GTNNAC	7 cut(s)	369, 661, 1028, 1036, 1163, 1189, 1232
Hpy99I	CGWCG	3 cut(s)	376, 470, 473
HpyAV	CCTTC	2 cut(s)	462, 1258
HpyCH4III	ACNGT	5 cut(s)	275, 366, 437, 592, 614
HpyCH4IV	ACGT	3 cut(s)	371, 471, 1236
HpyCH4V	TGCA	9 cut(s)	653, 680, 689, 818, 911, 920, 986, 1301, 1389
HpyF3I	CTNAG	7 cut(s)	14, 246, 645, 801, 1134, 1419, 1452
HpySE526I	ACGT	3 cut(s)	371, 471, 1236
Hsp92I	GRCGYC	2 cut(s)	471, 1101
Hsp92II	CATG	6 cut(s)	571, 775, 829, 890, 1305, 1477
HspAI	GCGC	2 cut(s)	337, 959
KpnI	GGTACC	1 cut(s)	543
KroI	GCCGGC	1 cut(s)	45
KroNI	GCCGGC	1 cut(s)	47
KspAI	GTTAAC	1 cut(s)	369
Kzo9I	GATC	3 cut(s)	125, 841, 1315
LmnI	GCTCC	4 cut(s)	555, 830, 935, 1143
LweI	GCATC	2 cut(s)	698, 1345
MaeI	CTAG	4 cut(s)	123, 279, 639, 1121
MaeII	ACGT	3 cut(s)	371, 471, 1236
MaeIII	GTNAC	3 cut(s)	360, 898, 1106
MalI	GATC	3 cut(s)	127, 843, 1317
MboI	GATC	3 cut(s)	125, 841, 1315
MflI	RGATCY	2 cut(s)	125, 1315
MhlI	GDGCHC	3 cut(s)	163, 866, 1140
MlsI	TGGCCA	2 cut(s)	755, 770
MluCI	AATT	4 cut(s)	461, 1070, 1115, 1379
MluNI	TGGCCA	2 cut(s)	755, 770
MlyI	GAGTC	2 cut(s)	637, 1411
MmeI	TCCRAC	1 cut(s)	1219
Mox20I	TGGCCA	2 cut(s)	755, 770
MroNI	GCCGGC	1 cut(s)	45
MscI	TGGCCA	2 cut(s)	755, 770
MseI	TTAA	6 cut(s)	213, 368, 879, 963, 1352, 1495
Msp20I	TGGCCA	2 cut(s)	755, 770
MspA1I	CMGCKG	6 cut(s)	396, 668, 683, 704, 782, 914
MspCI	CTTAAG	1 cut(s)	962
MspI	CCGG	8 cut(s)	46, 50, 89, 227, 266, 519, 546, 579
MspR9I	CCNGG	4 cut(s)	130, 735, 1112, 1432
Mva1269I	GAATGC	1 cut(s)	655
MvaI	CCWGG	4 cut(s)	130, 735, 1112, 1432
NaeI	GCCGGC	1 cut(s)	47
NcoI	CCATGG	2 cut(s)	567, 771
NdeI	CATATG	1 cut(s)	1269
NdeII	GATC	3 cut(s)	125, 841, 1315
NgoMIV	GCCGGC	1 cut(s)	45
NlaIII	CATG	6 cut(s)	571, 775, 829, 890, 1305, 1477
NlaIV	GGNNCC	4 cut(s)	541, 577, 1246, 1491
NmeAIII	GCCGAG	2 cut(s)	290, 1024
NmuCI	GTSAC	2 cut(s)	360, 898
PceI	AGGCCT	1 cut(s)	199
PctI	GAATGC	1 cut(s)	655
PdiI	GCCGGC	1 cut(s)	47
PfeI	GAWTC	1 cut(s)	759
PflFI	GACNNNGTC	1 cut(s)	470
PfoI	TCCNGGA	1 cut(s)	128
PinAI	ACCGGT	1 cut(s)	578
PleI	GAGTC	2 cut(s)	637, 1411
PpsI	GAGTC	2 cut(s)	637, 1411
PpuMI	RGGWCCY	1 cut(s)	1245
Psp124BI	GAGCTC	3 cut(s)	163, 866, 1140
Psp5II	RGGWCCY	1 cut(s)	1245
Psp6I	CCWGG	4 cut(s)	128, 733, 1110, 1430
PspFI	CCCAGC	1 cut(s)	1082
PspGI	CCWGG	4 cut(s)	128, 733, 1110, 1430
PspN4I	GGNNCC	4 cut(s)	541, 577, 1246, 1491
PspPI	GGNCC	5 cut(s)	104, 398, 581, 610, 1245
PspPPI	RGGWCCY	1 cut(s)	1245
PstI	CTGCAG	3 cut(s)	820, 913, 988
PstNI	CAGNNNCTG	2 cut(s)	785, 917
PsuI	RGATCY	2 cut(s)	125, 1315
PsyI	GACNNNGTC	1 cut(s)	470
PvuII	CAGCTG	3 cut(s)	668, 704, 914
RsaI	GTAC	3 cut(s)	79, 277, 541
RsaNI	GTAC	3 cut(s)	78, 276, 540
SacI	GAGCTC	3 cut(s)	163, 866, 1140
SaqAI	TTAA	6 cut(s)	213, 368, 879, 963, 1352, 1495
Sau3AI	GATC	3 cut(s)	125, 841, 1315
Sau96I	GGNCC	5 cut(s)	104, 398, 581, 610, 1245
ScaI	AGTACT	2 cut(s)	79, 277
SchI	GAGTC	2 cut(s)	637, 1411
ScrFI	CCNGG	4 cut(s)	130, 735, 1112, 1432
SduI	GDGCHC	3 cut(s)	163, 866, 1140
SfaNI	GCATC	2 cut(s)	698, 1345
SfcI	CTRYAG	4 cut(s)	705, 816, 909, 984
SinI	GGWCC	3 cut(s)	581, 610, 1245
SmlI	CTYRAG	4 cut(s)	332, 605, 947, 962
SmoI	CTYRAG	4 cut(s)	332, 605, 947, 962
SpeI	ACTAGT	1 cut(s)	278
Sse9I	AATT	4 cut(s)	461, 1070, 1115, 1379
SseBI	AGGCCT	1 cut(s)	199
SsiI	CCGC	8 cut(s)	69, 171, 263, 396, 411, 414, 683, 782
SspMI	CTAG	4 cut(s)	123, 279, 639, 1121
SstI	GAGCTC	3 cut(s)	163, 866, 1140
StuI	AGGCCT	1 cut(s)	199
StyD4I	CCNGG	4 cut(s)	128, 733, 1110, 1430
StyI	CCWWGG	4 cut(s)	144, 567, 771, 1096
TaaI	ACNGT	5 cut(s)	275, 366, 437, 592, 614
TaiI	ACGT	3 cut(s)	374, 474, 1239
TaqI	TCGA	2 cut(s)	465, 762
TaqII	GACCGA	1 cut(s)	37
TasI	AATT	4 cut(s)	461, 1070, 1115, 1379
TatI	WGTACW	2 cut(s)	77, 275
TauI	GCSGC	3 cut(s)	399, 414, 785
TfiI	GAWTC	1 cut(s)	759
Tru1I	TTAA	6 cut(s)	213, 368, 879, 963, 1352, 1495
Tru9I	TTAA	6 cut(s)	213, 368, 879, 963, 1352, 1495
TscAI	CASTG	3 cut(s)	809, 1138, 1175
TseFI	GTSAC	2 cut(s)	360, 898
Tsp45I	GTSAC	2 cut(s)	360, 898
TspDTI	ATGAA	2 cut(s)	474, 1238
TspGWI	ACGGA	3 cut(s)	440, 844, 1341
TspRI	CASTG	3 cut(s)	809, 1138, 1175
Tth111I	GACNNNGTC	1 cut(s)	470
Vha464I	CTTAAG	1 cut(s)	962
VpaK11BI	GGWCC	3 cut(s)	581, 610, 1245
XapI	RAATTY	2 cut(s)	461, 1379
XbaI	TCTAGA	1 cut(s)	122
XcmI	CCANNNNNNNNNTGG	1 cut(s)	763
XmiI	GTMKAC	1 cut(s)	1188
XspI	CTAG	4 cut(s)	123, 279, 639, 1121
ZraI	GACGTC	1 cut(s)	472
ZrmI	AGTACT	2 cut(s)	79, 277

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.