AT4G00630

efflux antiporter

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
261246 .. 268097
6852 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G00630.1

Sequence Viewer

Length: 3525 bp
ATGGATTTTGCGTCTAGCGTTCAGCGCCAGAGTATGTTTCACGGTGGTGCGGATTTTGCGAGTTACTGCTTGCCGAATCGAATGATAAGTGCGAAACTCTGTCCCAAAGGACTCGGCGGCACTAGATTTTGGGATCCGATGATTGATTCTAAAGTTCGCTCAGCTATTAGATCGAAACGAAATGTATCGTATCGTTCTTCTTTGACTTTGAATGCTGATTTCAATGGAAGATTTTACGGTCATTTGCTTCCTGCAAAACCCCAAAATGTTCCGCTGGGGTTTAGGTTACTTTGTCAAAGTAGCGATTCTGTAGGAGATTTGGTTGGGAATGACCGGAATTTGGAATTTGCTGAAGGTAGTGATGACAGGGAGGTTACGTTTTCTAAGGAAGAGAAAGACACAAGAGAGCAAGATTCTGCACCTAGTTTGGAGGAACTCAGGGATCTACTGAATAAGGCAACTAAAGAATTGGAAGTGGCTAGTCTCAACAGTACCATGTTTGAAGAAAAGGCTCAGAGGATTTCAGAGGTAGCGATAGCACTTAAGGATGAAGCAGCCAGTGCGTGGAACGATGTAAACCAAACACTTAATGTGGTTCAAGAGGCTGTTGATGAAGAGTCCGTTGCTAAAGAAGCTGTTCAGAAGGCTACTATGGCATTATCTCTGGCTGAAGCAAGGCTGCAGGTTGCACTTGAATCACTAGAAGCAGAAGGGTACAATACTTCTGAAGAGAGTGAGGTTAGAGATGGTGTTAAAGATAAAGAGGAAGCCCTTTTATCTGCTAAGGCTGACATAAAAGAATGCCAAGAAAATTTAGCAAGCTGTGAGGAACAACTCAGGCGTTTGCAAGTTAAGAAGGACGAGCTGCAGAAGGAAGTAGATAGATTGAATGAGGCTGCCGAGAGAGCGCAGATCAGCGCATTGAAAGCCGAGGAGGATGTTGCAAATATCATGGTTTTGGCCGAACAAGCTGTGGCATTTGAGCTTGAGGCTACTCAACGTGTGAATGATGCAGAGATTGCTTTGCAAAGAGCAGAGAAGACTCTTTTTGGTTCCCAAACCCAAGAAACAACCCAGGGAAAGGTATTGGATGGAAAGAATACTATTGTTGGTGAGGATGAAGTCTTGAGTGAAATTGTTGATGTAAGCCATCAGGCTGAAAGAGACTTAGTAGTAGTTGGAGTTTCATCAGATGTTGGGACTCAGTCTTACGAGTCAGATAATGAGAACGGAAAGCCAACTGCAGATTTTGCTAAAGAGGCTGAAGGAGAAGCAGAGAAGTCAAAGAATGTTGTTCTGACAAAAAAACAGGAAGTGCAGAAAGATCTGCCAAGGGAGAGTTCATCTCATAATGGTACCAAGACATCATTGAAGAAATCCTCTCGTTTCTTTCCTGCATCTTTCTTCTCTTCCAATGGGGATGGAACCGCAACAGTTTTTGAGAGTTTAGTTGAATCTGCGAAACAGCAGTGGCCTAAGCTAATTCTTGGATTTACACTTCTTGGGGCAGGAGTGGCAATCTATTCCAACGGAGTAGGAAGGAACAATCAGCTGCCACAACAGCCAAATATTGTCAGCACTAGCGCAGAAGATGTTTCCTCCAGCACAAAACCTCTGATCCGTCAGATGCAGAAACTTCCAAAGAGAATAAAGAAACTACTTGAGATGTTCCCTCAGCAAGAGGTTAATGAGGAGGAAGCTTCCCTTCTCGATGTGTTGTGGTTACTGCTTGCAAGCGTCATATTCGTGCCTCTATTTCAGAAAATTCCTGGAGGCAGCCCTGTTCTTGGGTATTTGGCGGCGGGAATCTTGATTGGTCCTTATGGTCTCTCAATAATTCGTAATGTGCATGGAACCAAGGCCATTGCAGAATTTGGAGTTGTCTTCTTGCTTTTCAACATTGGCCTTGAGCTCTCTGTCGAAAGGCTTAGTTCCATGAAGAAATATGTTTTTGGATTAGGCTCCGCGCAGGTTCTGGTAACGGCAGCAGTAATTGGTTTGATCACTCACTATGTTGCTGGTCAGGCTGGTCCAGCAGCAATAGTAATTGGCAATGGCCTGGCATTGTCTTCCACTGCTGTTGTCCTGCAGGTTTTACAAGAACGGGGTGAGAGCACCTCGAGACATGGACGAGCTACATTTTCGGTCTTGCTTTTTCAGGATCTGGCTGTGGTCGTGTTACTGATTCTCATCCCACTTATTTCACCTAATTCATCCAAAGGAGGGATTGGATTTCAAGCCATTGCTGAAGCTCTTGGACTAGCTGCAATCAAAGCAGCAGTTGCTATCACTGGCATAATTGCTGGTGGCCGTCTCCTTCTGCGGCCGATATACAAGCAAATTGCAGAAAACCGAAATGCTGAGATATTCTCCGCCAATACACTTCTGGTTATTCTTGGGACTAGTTTACTTACAGCTAGGGCGGGACTTTCCATGGCATTAGGAGCGTTTTTGGCTGGTCTACTACTTGCAGAGACTGAATTTTCCTTGCAAGTTGAATCAGATATCGCTCCATACCGTGGTCTTCTGTTGGGACTCTTCTTCATGACGGTGGGCATGTCCATTGATCCAAAACTTCTTCTCGCCAACTTCCCTCTCATAATGGGGACCTTAGGACTCTTATTAGTTGGCAAGACTATATTAGTGGTGATCATAGGCAAATTGTTTGGCATTTCAATCATATCTGCCGTGAGGGTCGGTCTTCTTCTGGCTCCAGGTGGAGAATTCGCGTTTGTTGCTTTTGGAGAAGCTGTCAATCAGGGTATAATGACTCCGCAGCTATCTTCATTACTGTTTCTCGTCGTGGGAATATCAATGGCTCTTACTCCTTGGTTAGCTGCTGGCGGCCAATTAATTGCGTCTCGATTTGAGTTACAAGATGTTCGAAGTTTATTACCAGTTGAAAGCGAGACGGATGATTTACAGGGTCACATCATTATTTGCGGATTTGGACGAATTGGGCAGATAATCGCTCAGCTTCTTTCTGAAAGACTTATCCCATTTGTTGCCCTCGATGTCAGCAGTGATAGAGTAGCAATTGGTCGTTCCCTAGATCTTCCAGTTTATTTTGGAGACGCTGGTAGTAGAGAGGTACTCCACAAAATCGGGGCAGATAGAGCATGTGCTGCGGCTATTGCTTTAGACACACCTGGAGCAAATTACAGGTGTGTCTGGGCTCTTAGCAAATATTTCCCCAATGTCAAAACCTTTGTCCGTGCACATGACGTTGATCATGGTCTCAATCTTGAAAAAGCCGGCGCTACCGCTGTTGTTCCTGAGACGCTGGAACCAAGTCTTCAGTTAGCAGCTGCTGTTCTTGCACAGGCCAAATTACCTACATCAGAAATAGCAACAACGATCAACGAGTTCAGATCTCGTCACTTGTCTGAACTAGCTGAGCTATGTGAGGCAAGTGGAAGCTCTCTAGGTTACGGGTTCTCAAGAAGTACGAGCAAACCAAAACCACCATCACCATCTGAAACATCTGACGATAACCAGATTATTGAAGGCACACTCGCTATCTAA

Protein Analysis

1174

Amino Acids

126.16

Weight (kDa)

5.11

Isoelectric Point (pI)

37.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_H_Exchanger PF00999 579 - 946 1.9e-56 Sodium/hydrogen exchanger, transmembrane
TrkA_N PF02254 978 - 1091 1.2e-20 TrkA-N domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 673, 1960, 2080
Acc65I GGTACC 1 cut(s) 1355
AccB1I GGYRCC 1 cut(s) 1355
AccB7I CCANNNNNTGG 2 cut(s) 564, 2519
AccI GTMKAC 1 cut(s) 2461
AccII CGCG 2 cut(s) 1967, 2729
AclWI GGATC 6 cut(s) 128, 141, 450, 1612, 2169, 2561
AcoI YGGCCR 4 cut(s) 960, 2308, 2324, 2845
AcsI RAATTY 7 cut(s) 337, 344, 811, 1764, 1871, 2480, 2723
AcuI CTGAAG 6 cut(s) 372, 690, 747, 1284, 2268, 3281
AfaI GTAC 5 cut(s) 493, 716, 1357, 3093, 3448
AfiI CCNNNNNNNGG 6 cut(s) 340, 564, 1081, 1787, 2223, 2519
AflII CTTAAG 1 cut(s) 542
AflIII ACRYGT 1 cut(s) 1000
AhlI ACTAGT 1 cut(s) 2402
AjnI CCWGG 5 cut(s) 1074, 1768, 2058, 2713, 3148
AjuI GAANNNNNNNTTGG 2 cut(s) 1324, 1356
AleI CACNNNNGTG 1 cut(s) 45
Alw21I GWGCWC 3 cut(s) 1914, 2117, 3220
Alw44I GTGCAC 1 cut(s) 3216
AlwI GGATC 6 cut(s) 128, 141, 450, 1612, 2169, 2561
AlwNI CAGNNNCTG 4 cut(s) 1975, 2164, 2477, 3311
Ama87I CYCGRG 1 cut(s) 2119
AoxI GGCC 9 cut(s) 960, 1472, 1860, 1903, 2056, 2308, 2324, 2845, 3324
ApaLI GTGCAC 1 cut(s) 3216
ApoI RAATTY 7 cut(s) 337, 344, 811, 1764, 1871, 2480, 2723
ArsI GACNNNNNNTTYG 2 cut(s) 3195, 3227
AseI ATTAAT 1 cut(s) 2852
Asp700I GAANNNNTTC 1 cut(s) 636
Asp718I GGTACC 1 cut(s) 1355
AspLEI GCGC 6 cut(s) 27, 910, 920, 1586, 1969, 3260
AspS9I GGNCC 3 cut(s) 1817, 2030, 2607
AsuHPI GGTGA 5 cut(s) 1124, 2120, 2196, 2659, 3462
AsuII TTCGAA 1 cut(s) 2884
AvaI CYCGRG 1 cut(s) 2119
AvaII GGWCC 3 cut(s) 1817, 2030, 2607
AxyI CCTNAGG 1 cut(s) 2611
BaeGI GKGCMC 1 cut(s) 3220
BamHI GGATCC 1 cut(s) 133
BanI GGYRCC 1 cut(s) 1355
BanII GRGCYC 2 cut(s) 1914, 3178
BbsI GAAGAC 6 cut(s) 1046, 1876, 2061, 2516, 2693, 3287
Bbv12I GWGCWC 3 cut(s) 1914, 2117, 3220
BbvCI CCTCAGC 1 cut(s) 1674
BccI CCATC 6 cut(s) 740, 1085, 1158, 1415, 3475, 3481
BceAI ACGGC 3 cut(s) 1998, 2295, 2672
BciT130I CCWGG 5 cut(s) 1076, 1770, 2060, 2715, 3150
BclI TGATCA 3 cut(s) 2001, 2649, 3229
BcuI ACTAGT 1 cut(s) 2402
BfmI CTRYAG 5 cut(s) 309, 680, 866, 1242, 2087
BfoI RGCGCY 2 cut(s) 28, 3261
BfrI CTTAAG 1 cut(s) 542
BfuAI ACCTGC 3 cut(s) 673, 1960, 2080
BglII AGATCT 3 cut(s) 1324, 3052, 3371
BlpI GCTNAGC 3 cut(s) 160, 2973, 3396
Bme1390I CCNGG 5 cut(s) 1076, 1770, 2060, 2715, 3150
Bme18I GGWCC 3 cut(s) 1817, 2030, 2607
BmeT110I CYCGRG 1 cut(s) 2119
BmgT120I GGNCC 3 cut(s) 1817, 2030, 2607
BmiI GGNNCC 9 cut(s) 135, 1054, 1357, 1426, 1855, 1963, 2608, 2712, 3288
BmrFI CCNGG 5 cut(s) 1076, 1770, 2060, 2715, 3150
BmsI GCATC 3 cut(s) 1000, 1406, 1617
BpiI GAAGAC 6 cut(s) 1046, 1876, 2061, 2516, 2693, 3287
BplI GAGNNNNNCTC 8 cut(s) 1330, 1362, 2102, 2134, 2354, 2386, 3078, 3110
BpmI CTGGAG 4 cut(s) 1585, 1791, 2697, 3171
Bpu10I CCTNAGC 3 cut(s) 783, 1476, 1674
Bpu1102I GCTNAGC 3 cut(s) 160, 2973, 3396
Bpu14I TTCGAA 1 cut(s) 2884
BpuEI CTTGAG 5 cut(s) 1007, 1147, 1682, 1928, 3424
BsaBI GATNNNNATC 1 cut(s) 2189
BsaI GGTCTC 2 cut(s) 1832, 3242
BsaJI CCNNGG 8 cut(s) 930, 1074, 1075, 1331, 1857, 2433, 2518, 2828
BsaWI WCCGGW 1 cut(s) 333
BsaXI ACNNNNNCTCC 6 cut(s) 306, 336, 362, 392, 2736, 2766
Bsc4I CCNNNNNNNGG 6 cut(s) 340, 564, 1081, 1787, 2223, 2519
Bse118I RCCGGY 1 cut(s) 3254
Bse1I ACTGG 4 cut(s) 558, 2296, 2897, 3059
Bse21I CCTNAGG 1 cut(s) 2611
Bse3DI GCAATG 3 cut(s) 1863, 2059, 2241
Bse8I GATNNNNATC 1 cut(s) 2189
BseBI CCWGG 5 cut(s) 1076, 1770, 2060, 2715, 3150
BseDI CCNNGG 8 cut(s) 930, 1074, 1075, 1331, 1857, 2433, 2518, 2828
BseGI GGATG 8 cut(s) 553, 943, 1096, 1123, 1426, 2190, 2213, 2920
BseJI GATNNNNATC 1 cut(s) 2189
BseLI CCNNNNNNNGG 6 cut(s) 340, 564, 1081, 1787, 2223, 2519
BseMI GCAATG 3 cut(s) 1863, 2059, 2241
BseNI ACTGG 4 cut(s) 558, 2296, 2897, 3059
BseRI GAGGAG 2 cut(s) 947, 1706
BseSI GKGCMC 1 cut(s) 3220
BseX3I CGGCCG 1 cut(s) 2324
BseYI CCCAGC 1 cut(s) 274
BsgI GTGCAG 2 cut(s) 402, 1337
Bsh1236I CGCG 2 cut(s) 1967, 2729
Bsh1285I CGRYCG 1 cut(s) 2327
BshFI GGCC 9 cut(s) 962, 1474, 1862, 1905, 2058, 2310, 2326, 2847, 3326
BshNI GGYRCC 1 cut(s) 1355
BsiEI CGRYCG 1 cut(s) 2327
BsiHKAI GWGCWC 3 cut(s) 1914, 2117, 3220
BsiHKCI CYCGRG 1 cut(s) 2119
BsiSI CCGG 2 cut(s) 334, 3255
BslFI GGGAC 6 cut(s) 87, 1213, 2413, 2439, 2547, 2620
BslI CCNNNNNNNGG 6 cut(s) 340, 564, 1081, 1787, 2223, 2519
BsmBI CGTCTC 5 cut(s) 2318, 2865, 2903, 3066, 3272
BsmFI GGGAC 6 cut(s) 87, 1213, 2413, 2439, 2547, 2620
BsmI GAATGC 2 cut(s) 217, 806
BsnI GGCC 9 cut(s) 962, 1474, 1862, 1905, 2058, 2310, 2326, 2847, 3326
Bso31I GGTCTC 2 cut(s) 1832, 3242
BsoBI CYCGRG 1 cut(s) 2119
Bsp119I TTCGAA 1 cut(s) 2884
Bsp1286I GDGCHC 4 cut(s) 1914, 2117, 3178, 3220
Bsp1720I GCTNAGC 3 cut(s) 160, 2973, 3396
Bsp19I CCATGG 1 cut(s) 2433
BspANI GGCC 9 cut(s) 962, 1474, 1862, 1905, 2058, 2310, 2326, 2847, 3326
BspFNI CGCG 2 cut(s) 1967, 2729
BspHI TCATGA 1 cut(s) 2544
BspLI GGNNCC 9 cut(s) 135, 1054, 1357, 1426, 1855, 1963, 2608, 2712, 3288
BspMAI CTGCAG 4 cut(s) 684, 870, 1246, 2091
BspMI ACCTGC 3 cut(s) 673, 1960, 2080
BspPI GGATC 6 cut(s) 128, 141, 450, 1612, 2169, 2561
BspT104I TTCGAA 1 cut(s) 2884
BspT107I GGYRCC 1 cut(s) 1355
BspTI CTTAAG 1 cut(s) 542
BspTNI GGTCTC 2 cut(s) 1832, 3242
BsrDI GCAATG 3 cut(s) 1863, 2059, 2241
BsrFI RCCGGY 1 cut(s) 3254
BsrI ACTGG 4 cut(s) 558, 2296, 2897, 3059
BssAI RCCGGY 1 cut(s) 3254
BssECI CCNNGG 8 cut(s) 930, 1074, 1075, 1331, 1857, 2433, 2518, 2828
BssT1I CCWWGG 4 cut(s) 1331, 1857, 2433, 2828
Bst2UI CCWGG 5 cut(s) 1076, 1770, 2060, 2715, 3150
Bst4CI ACNGT 7 cut(s) 44, 239, 491, 1435, 2519, 2551, 2793
Bst6I CTCTTC 5 cut(s) 384, 609, 723, 1414, 2543
BstAFI CTTAAG 1 cut(s) 542
BstAPI GCANNNNNTGC 5 cut(s) 560, 1019, 1250, 2282, 3125
BstBI TTCGAA 1 cut(s) 2884
BstC8I GCNNGC 6 cut(s) 71, 820, 1731, 1735, 2842, 3256
BstDSI CCRYGG 2 cut(s) 2433, 2518
BstF5I GGATG 8 cut(s) 553, 943, 1096, 1123, 1426, 2190, 2213, 2920
BstFNI CGCG 2 cut(s) 1967, 2729
BstH2I RGCGCY 2 cut(s) 28, 3261
BstHHI GCGC 6 cut(s) 27, 910, 920, 1586, 1969, 3260
BstMCI CGRYCG 1 cut(s) 2327
BstNI CCWGG 5 cut(s) 1076, 1770, 2060, 2715, 3150
BstNSI RCATGY 2 cut(s) 2560, 3123
BstSCI CCNGG 5 cut(s) 1074, 1768, 2058, 2713, 3148
BstSFI CTRYAG 5 cut(s) 309, 680, 866, 1242, 2087
BstSLI GKGCMC 1 cut(s) 3220
BstUI CGCG 2 cut(s) 1967, 2729
BstV2I GAAGAC 6 cut(s) 1046, 1876, 2061, 2516, 2693, 3287
BstX2I RGATCY 6 cut(s) 133, 442, 1324, 2161, 3052, 3371
BstYI RGATCY 6 cut(s) 133, 442, 1324, 2161, 3052, 3371
BstZI CGGCCG 1 cut(s) 2324
Bsu36I CCTNAGG 1 cut(s) 2611
BsuRI GGCC 9 cut(s) 962, 1474, 1862, 1905, 2058, 2310, 2326, 2847, 3326
BtgI CCRYGG 2 cut(s) 2433, 2518
BtsCI GGATG 8 cut(s) 553, 943, 1096, 1123, 1426, 2190, 2213, 2920
BtsI GCAGTG 3 cut(s) 1475, 2073, 3028
BtsIMutI CAGTG 5 cut(s) 565, 1475, 2073, 2289, 3028
BveI ACCTGC 3 cut(s) 673, 1960, 2080
Cac8I GCNNGC 6 cut(s) 71, 820, 1731, 1735, 2842, 3256
CaiI CAGNNNCTG 4 cut(s) 1975, 2164, 2477, 3311
CciI TCATGA 1 cut(s) 2544
CfoI GCGC 6 cut(s) 27, 910, 920, 1586, 1969, 3260
Cfr10I RCCGGY 1 cut(s) 3254
Cfr13I GGNCC 3 cut(s) 1817, 2030, 2607
CseI GACGC 4 cut(s) 1726, 2847, 3083, 3289
Csp6I GTAC 5 cut(s) 492, 715, 1356, 3092, 3447
CspCI CAANNNNNGTGG 2 cut(s) 2062, 2097
CviQI GTAC 5 cut(s) 492, 715, 1356, 3092, 3447
EaeI YGGCCR 4 cut(s) 960, 2308, 2324, 2845
EagI CGGCCG 1 cut(s) 2324
Eam1104I CTCTTC 5 cut(s) 384, 609, 723, 1414, 2543
EarI CTCTTC 5 cut(s) 384, 609, 723, 1414, 2543
EciI GGCGGA 1 cut(s) 2362
Ecl136II GAGCTC 1 cut(s) 1912
EclXI CGGCCG 1 cut(s) 2324
Eco130I CCWWGG 4 cut(s) 1331, 1857, 2433, 2828
Eco24I GRGCYC 2 cut(s) 1914, 3178
Eco31I GGTCTC 2 cut(s) 1832, 3242
Eco32I GATATC 1 cut(s) 2506
Eco47I GGWCC 3 cut(s) 1817, 2030, 2607
Eco52I CGGCCG 1 cut(s) 2324
Eco53kI GAGCTC 1 cut(s) 1912
Eco57I CTGAAG 6 cut(s) 372, 690, 747, 1284, 2268, 3281
Eco81I CCTNAGG 1 cut(s) 2611
Eco88I CYCGRG 1 cut(s) 2119
EcoICRI GAGCTC 1 cut(s) 1912
EcoO109I RGGNCCY 1 cut(s) 2607
EcoRI GAATTC 1 cut(s) 2723
EcoRII CCWGG 5 cut(s) 1074, 1768, 2058, 2713, 3148
EcoRV GATATC 1 cut(s) 2506
EcoT14I CCWWGG 4 cut(s) 1331, 1857, 2433, 2828
EcoT38I GRGCYC 2 cut(s) 1914, 3178
ErhI CCWWGG 4 cut(s) 1331, 1857, 2433, 2828
Esp3I CGTCTC 5 cut(s) 2318, 2865, 2903, 3066, 3272
FalI AAGNNNNNCTT 2 cut(s) 1689, 1721
FaqI GGGAC 6 cut(s) 87, 1213, 2413, 2439, 2547, 2620
FauI CCCGC 2 cut(s) 1795, 2416
FbaI TGATCA 3 cut(s) 2001, 2649, 3229
FblI GTMKAC 1 cut(s) 2461
FokI GGATG 8 cut(s) 560, 950, 1103, 1130, 1433, 2177, 2200, 2927
FriOI GRGCYC 2 cut(s) 1914, 3178
GlaI GCGC 6 cut(s) 26, 909, 919, 1585, 1968, 3259
GsaI CCCAGC 1 cut(s) 278
GsuI CTGGAG 4 cut(s) 1585, 1791, 2697, 3171
HaeII RGCGCY 2 cut(s) 28, 3261
HaeIII GGCC 9 cut(s) 962, 1474, 1862, 1905, 2058, 2310, 2326, 2847, 3326
HapII CCGG 2 cut(s) 334, 3255
HgaI GACGC 4 cut(s) 1726, 2847, 3083, 3289
HhaI GCGC 6 cut(s) 27, 910, 920, 1586, 1969, 3260
Hin6I GCGC 6 cut(s) 25, 908, 918, 1584, 1967, 3258
HinP1I GCGC 6 cut(s) 25, 908, 918, 1584, 1967, 3258
HindIII AAGCTT 1 cut(s) 1698
HpaII CCGG 2 cut(s) 334, 3255
HphI GGTGA 5 cut(s) 1124, 2120, 2196, 2659, 3462
Hpy166II GTNNAC 4 cut(s) 577, 2408, 2462, 3218
Hpy8I GTNNAC 4 cut(s) 577, 2408, 2462, 3218
Hpy99I CGWCG 1 cut(s) 2804
HpyCH4III ACNGT 7 cut(s) 44, 239, 491, 1435, 2519, 2551, 2793
HpyCH4IV ACGT 3 cut(s) 377, 1000, 3225
HpySE526I ACGT 3 cut(s) 377, 1000, 3225
HspAI GCGC 6 cut(s) 25, 908, 918, 1584, 1967, 3258
KpnI GGTACC 1 cut(s) 1359
KroI GCCGGC 1 cut(s) 3254
KroNI GCCGGC 1 cut(s) 3256
Ksp22I TGATCA 3 cut(s) 2001, 2649, 3229
LmnI GCTCC 5 cut(s) 1967, 2444, 2515, 2716, 3152
LweI GCATC 3 cut(s) 1000, 1406, 1617
MaeII ACGT 3 cut(s) 377, 1000, 3225
MfeI CAATTG 1 cut(s) 3036
MflI RGATCY 6 cut(s) 133, 442, 1324, 2161, 3052, 3371
MhlI GDGCHC 4 cut(s) 1914, 2117, 3178, 3220
MlyI GAGTC 8 cut(s) 105, 626, 1036, 1195, 1223, 2529, 2610, 2764
MmeI TCCRAC 2 cut(s) 1159, 1551
MroNI GCCGGC 1 cut(s) 3254
MroXI GAANNNNTTC 1 cut(s) 636
MseI TTAA 6 cut(s) 543, 588, 753, 852, 1686, 2852
MslI CAYNNNNRTG 3 cut(s) 45, 1745, 2549
MspA1I CMGCKG 4 cut(s) 274, 1552, 3266, 3308
MspCI CTTAAG 1 cut(s) 542
MspI CCGG 2 cut(s) 334, 3255
MspR9I CCNGG 5 cut(s) 1076, 1770, 2060, 2715, 3150
MunI CAATTG 1 cut(s) 3036
Mva1269I GAATGC 2 cut(s) 217, 806
MvaI CCWGG 5 cut(s) 1076, 1770, 2060, 2715, 3150
MvnI CGCG 2 cut(s) 1967, 2729
NaeI GCCGGC 1 cut(s) 3256
NcoI CCATGG 1 cut(s) 2433
NgoMIV GCCGGC 1 cut(s) 3254
NlaIV GGNNCC 9 cut(s) 135, 1054, 1357, 1426, 1855, 1963, 2608, 2712, 3288
NmeAIII GCCGAG 3 cut(s) 93, 925, 955
NmuCI GTSAC 2 cut(s) 2927, 3377
NspI RCATGY 2 cut(s) 2560, 3123
NspV TTCGAA 1 cut(s) 2884
OliI CACNNNNGTG 1 cut(s) 45
PaeR7I CTCGAG 1 cut(s) 2119
PagI TCATGA 1 cut(s) 2544
PasI CCCWGGG 1 cut(s) 1075
PctI GAATGC 2 cut(s) 217, 806
PdiI GCCGGC 1 cut(s) 3256
PdmI GAANNNNTTC 1 cut(s) 636
PfeI GAWTC 9 cut(s) 76, 146, 305, 413, 695, 1454, 1806, 2185, 2498
PflFI GACNNNGTC 1 cut(s) 1204
PflMI CCANNNNNTGG 2 cut(s) 564, 2519
PfoI TCCNGGA 1 cut(s) 1768
PleI GAGTC 8 cut(s) 105, 625, 1036, 1195, 1222, 2529, 2610, 2764
PpsI GAGTC 8 cut(s) 105, 625, 1036, 1195, 1222, 2529, 2610, 2764
PpuMI RGGWCCY 1 cut(s) 2607
PshBI ATTAAT 1 cut(s) 2852
Psp124BI GAGCTC 1 cut(s) 1914
Psp5II RGGWCCY 1 cut(s) 2607
Psp6I CCWGG 5 cut(s) 1074, 1768, 2058, 2713, 3148
PspFI CCCAGC 1 cut(s) 274
PspGI CCWGG 5 cut(s) 1074, 1768, 2058, 2713, 3148
PspN4I GGNNCC 9 cut(s) 135, 1054, 1357, 1426, 1855, 1963, 2608, 2712, 3288
PspPI GGNCC 3 cut(s) 1817, 2030, 2607
PspPPI RGGWCCY 1 cut(s) 2607
PstI CTGCAG 4 cut(s) 684, 870, 1246, 2091
PstNI CAGNNNCTG 4 cut(s) 1975, 2164, 2477, 3311
PsuI RGATCY 6 cut(s) 133, 442, 1324, 2161, 3052, 3371
PsyI GACNNNGTC 1 cut(s) 1204
PvuII CAGCTG 2 cut(s) 1552, 3308
RsaI GTAC 5 cut(s) 493, 716, 1357, 3093, 3448
RsaNI GTAC 5 cut(s) 492, 715, 1356, 3092, 3447
RseI CAYNNNNRTG 3 cut(s) 45, 1745, 2549
SacI GAGCTC 1 cut(s) 1914
SaqAI TTAA 6 cut(s) 543, 588, 753, 852, 1686, 2852
Sau96I GGNCC 3 cut(s) 1817, 2030, 2607
SbfI CCTGCAGG 1 cut(s) 2091
SchI GAGTC 8 cut(s) 105, 626, 1036, 1195, 1223, 2529, 2610, 2764
ScrFI CCNGG 5 cut(s) 1076, 1770, 2060, 2715, 3150
SdaI CCTGCAGG 1 cut(s) 2091
SduI GDGCHC 4 cut(s) 1914, 2117, 3178, 3220
SfaNI GCATC 3 cut(s) 1000, 1406, 1617
SfcI CTRYAG 5 cut(s) 309, 680, 866, 1242, 2087
Sfr274I CTCGAG 1 cut(s) 2119
SfuI TTCGAA 1 cut(s) 2884
SinI GGWCC 3 cut(s) 1817, 2030, 2607
SlaI CTCGAG 1 cut(s) 2119
SmiMI CAYNNNNRTG 3 cut(s) 45, 1745, 2549
SmlI CTYRAG 7 cut(s) 542, 986, 1126, 1661, 1907, 2119, 3439
SmoI CTYRAG 7 cut(s) 542, 986, 1126, 1661, 1907, 2119, 3439
SpeI ACTAGT 1 cut(s) 2402
Sse8387I CCTGCAGG 1 cut(s) 2091
SspI AATATT 2 cut(s) 1570, 3188
SstI GAGCTC 1 cut(s) 1914
StyD4I CCNGG 5 cut(s) 1074, 1768, 2058, 2713, 3148
StyI CCWWGG 4 cut(s) 1331, 1857, 2433, 2828
TaaI ACNGT 7 cut(s) 44, 239, 491, 1435, 2519, 2551, 2793
TaiI ACGT 3 cut(s) 380, 1003, 3228
TaqI TCGA 8 cut(s) 79, 173, 1710, 1920, 2120, 2863, 2884, 3012
TaqII GACCGA 2 cut(s) 2134, 2687
TauI GCSGC 5 cut(s) 120, 1802, 2326, 2847, 3131
TfiI GAWTC 9 cut(s) 76, 146, 305, 413, 695, 1454, 1806, 2185, 2498
Tru1I TTAA 6 cut(s) 543, 588, 753, 852, 1686, 2852
Tru9I TTAA 6 cut(s) 543, 588, 753, 852, 1686, 2852
TscAI CASTG 5 cut(s) 565, 1475, 2080, 2296, 3028
TseFI GTSAC 2 cut(s) 2927, 3377
Tsp45I GTSAC 2 cut(s) 2927, 3377
TspDTI ATGAA 9 cut(s) 564, 627, 1134, 1176, 1332, 1952, 2202, 2533, 2775
TspGWI ACGGA 6 cut(s) 610, 1245, 1545, 1610, 2927, 3203
TspRI CASTG 5 cut(s) 565, 1475, 2080, 2296, 3028
Tth111I GACNNNGTC 1 cut(s) 1204
Van91I CCANNNNNTGG 2 cut(s) 564, 2519
Vha464I CTTAAG 1 cut(s) 542
VneI GTGCAC 1 cut(s) 3216
VpaK11BI GGWCC 3 cut(s) 1817, 2030, 2607
VspI ATTAAT 1 cut(s) 2852
XapI RAATTY 7 cut(s) 337, 344, 811, 1764, 1871, 2480, 2723
XceI RCATGY 2 cut(s) 2560, 3123
XcmI CCANNNNNNNNNTGG 1 cut(s) 2383
XhoI CTCGAG 1 cut(s) 2119
XmiI GTMKAC 1 cut(s) 2461
XmnI GAANNNNTTC 1 cut(s) 636
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.