Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0007831

Physical Location & Seq

Genomic Coordinates Reverse (-)

8905833 .. 8914461

Gene Structure 8629 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g07930.16

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3210 bp

ATGGGAGTTGAGTCTGTTCATGATGCTGAGTTGACTGACTCCAGAGAAGAGGATGGACGTTATGAACACAAAGAAGAACCAGAGGCACCTACATTGGATGAATTGAAGGAATTGCTGCAAAATGCCAAGAAAGAACTGGAAGCTGCACGACTTAATAGTACCATGTTTGAAGAAAAGGCTCAGAGAATATCAGAAGCTGCGATATCCCTACAGGATGAAGCAGCAAATGCTTGGAATAATGTCAATTCAACCCTTGATGCTGTCCAAGAGATCGTTAATGAAGAGACTATTGCCAAAGAAGGTGTTCAGAAAGCAACAATGGCACTTTCATTGGCAGAGGCAAGGCTTCAGGTGGCAGTAGAATCTTTAGGGATTGCAAAAAGAGAGGGAAGTTCGTCTGAAATTTCACAAGAGAATGATGGGGAACATGATTGCAAAGAAGAAGAAAAAGCACTTTTGGTTACCCAGGAAGATTTTAAGGATTGCCAGGCAAATTTGGCCATCTGTGAGGCAGAGCTAATGCACTTGCAGAGTAAAAAAGAGGAGTTGCAGAAGGAAGTGGACAGGTTGAATGAGGTTGCAGAGAAAGCACAGCTCAGTGCTTTGAAAGCAGAAGAGGATGTAACCAACATAATGCTTCTAGCAGAGCAAGCTGTTGCTTTTGAACTTGAAGCTGCAAAGCGTGTCAACGATGCAGAAATTGCATTACAAAGAGCAGAGAAATCTAGTTCCAACTTAATTGTTGATACCACGGAAAACAACCAAGGACAGGTGTTGAGTGATGATAATGCTGCTCTTGAGGAAGAGGAGACGGTAGTCCTAGGAAGTTCTGCTCATATCATTGTTGAAAGGGACAGAGATGTGCCAATTGATGGTGATTTGTTAGCTGTCAAGCCTTTGCCAGACAGCCCTTCTGACAAAATCAGCCAGAGTTTTGAAGATGTGAATCAATCTGTTGATCTGAGTGATCATGAGAATGGAAAGTTAAGTTTGGATTCTTTAAAAGACGCTGAAGTAGAAGCTGAAAAGTCAAAGAATGTGGTTCAAGCTAAAAAGCAGGAAACTCAGAAGGACTTGAGTAGGGAGAGTTCACCGTTAAATTCTCCCAAGACATTATCAAAGAAGTCTTCTCGTTTCTTTTCTGCATCTTTCTTCTCTTCTGCAGATGGAACTCCGACATCAGTTTTCCGGGGTCTGATGGAGTATGCAAGGAAGCAATGGCCAAAGCTCGTTGTTGGGATGTTCCTGTTTGGAGTAGGGCTCACCTTTTATGCTAATCGAGCAGAAAGGGCCACACAACTGTTACAACAGCCAGATGTCATGACCACTAGTATTGAAGAAGTTTCCTCAAGTGCGAAGCCTCTAGTTCGAGAATTACAGAAACTTCCTAGAAGATTTAAAAAACTAATTGATATGATTCCTCATCAAGAGGTGAATGAGGAGGAAGCTTCTCTCTTTGACATGTTATGGTTATTGTTAGCAAGTGTGATATTTGTGCCTGTATTTCAAAGGATTCCTGGAGGCAGTCCTGTTCTTGGGTACTTAGCTGCTGGCATCTTGATTGGGCCTTATGGCCTCTCTATTATTCGTCATGTACATGGGACAAAGGCAATTGCTGAATTTGGAGTTGTTTTCTTGCTGTTCAACATTGGCCTCGAGGTTTTGGTGACAGCTGTTGTGGTTGGTGTGGTTGCTCATTATGTTTGTGGGCTGCCTGGTCCTGCTGCAATAGTAATTGGCAATGGTCTGGCTTTATCATCCACTGCAGTTGTTCTGCAGGTTTTGCAAGAGCGGGGTGAGAGCACTTCACGTCATGGCCGTGCTACGTTTTCTGTCCTACTTTTCCAGGATTTGGCTGTTGTTGTTTTGCTAATTCTTATACCTCTGATTTCACCAAATTCATCCAAAGGAGGGATTGGTTTTCAAGCCATTGCTGAAGCTCTTGGACTTGCTGCTGTAAAGGCAGCAGTTGCCATCACAGCCATAATTGCTGGTGGGCGCTTGTTGCTTCGACCAATTTATAGGCAAATTGCAGAAAATCAAAATGCAGAAATATTTTCTGCCAATACATTGTTTGTTATCCTAGGAACAAGTCTTCTCACTGCCAGGGCTGGACTATCCATGGCACTGGGAGCATTTTTGGCTGGTTTGCTGCTTGCAGAAACTGAATTTTCTTTGCAGGTTGAGTCAGATATTGCTCCATACCGTGGTCTTCTACTGGGCCTCTTCTTTATGACGGTTGGAATGTCTATTGATCCAAAACTTCTTCTTTCAAACTTCCCGGTTATAGCTGGATCATTAGGACTCCTAATTGGTGGCAAATCCTTATTGGTTGCTTTGATTGGCAAACTGTTTGGCGTTTCAATAATATCTGCAATAAGAGTTGGTCTTCTTCTTGCTCCTGGTGGAGAGTTTGCTTTTGTTGCTTTTGGTGAAGCTGTTAATCAGGGAATAATGACTCCTCAATTATCATCATTGCTCTTCCTTCTTGTGGGAATTTCAATGGCCATCACACCATGGCTAGCTGCTGGAGGGCAGTTAATTGCATCTCGTTTTGAGGTGCATGATGTTCGAAGTTTACTACCTGTTGAGAGTGAGACAGATGATTTACAAGGTCATATAATCATCTGTGGATTTGGTCGAGTTGGCCAGATAATTGCACAGCTTCTTTCTGAGAGATTAATTCCATTTGTAGCTCTTGATGTGAGGAGTGATAGAGTGGCAGTTGGACGCTCGCTGGACCTTCCAGTCTACTTTGGAGATGCTGGTAGCCGAGAGGTGCTCCACAAAATTGGTGCTGAAAGAGCATGTGCTGCAGCGATCACTTTAGATTCTCCTGGTGCAAACTATAGAACTGTTTGGGCTCTAAGCAAGTATTTCCCGAACGTCAAAACTTTTGTTCGTGCTCATGATGTCGATCATGGTCTTAATTTGGAGAAGGCTGGGGCTACAGCGGTTGTTCCAGAGACCTTGGAACCGAGTCTGCAGTTGGCAGCTGCTGTTCTCGCTCAGGCTAAACTACCCATGTCAGAGATCACATCAACAATCAACGAGTATAGGTCCCGTCACCTTGCGGAGCTAACTGAGTTATGCGAAACTAGCGGAAGTTCTCTTGGCTATGGATTTTCTCGAATGATGAGTAAACCCAAAACTCCTCCTCCAGATTCTACAGATGAGAACCAGTTCACTGAAGGAACACTGGCGATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005451 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006996 GO:0008150 GO:0008324 GO:0009507 GO:0009526 GO:0009536 GO:0009657 GO:0009658 GO:0009941 GO:0009987 GO:0010109 GO:0015075 GO:0015077 GO:0015078 GO:0015079 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015386 GO:0015491 GO:0015672 GO:0016020 GO:0016043 GO:0019222 GO:0022804 GO:0022821 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0031323 GO:0031967 GO:0031969 GO:0031975 GO:0034220 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0055085 GO:0065007 GO:0071804 GO:0071805 GO:0071840 GO:0098655 GO:0098660 GO:0098662 GO:0099516 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MutS_I MutS_II MutS_III MutS_V Na_H_Exchanger TrkA_N

Protein Analysis

1070

Amino Acids

115.3

Weight (kDa)

4.89

Isoelectric Point (pI)

41.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007831)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00630 AT4G00630
fragaria_vesca	FvH4_7g13660 FvH4_7g13660 FvH4_7g13660 FvH4_7g13660 FvH4_7g13660
malus_domestica	MD01G1053700.v1.1 MD07G1141400.v1.1
prunus_persica	Prupe.2G162700_v2.0.a1 Prupe.2G162700_v2.0.a1
pyrus_communis	pycom01g07930 pycom07g14030
rosa_chinensis	RchiOBHm_Chr1g0353741
rosa_laevigata	RLG00000028262
rosa_multiflora	Rmu_sc0005947.1_g000021
rosa_roxburghii	Rroxscaffold_4G00301700
rosa_rugosa	Rorug01G0237300 Rorug01G0237300
rosa_samantha	Rh1AG249500 Rh1BG219600 Rh1CG232200 Rh1DG246600
rosa_wichuraiana	Rw1G021770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2747
AbsI	CCTCGAGG	1 cut(s)	1655
Acc36I	ACCTGC	2 cut(s)	1768, 2170
AccB1I	GGYRCC	1 cut(s)	85
AccB7I	CCANNNNNTGG	3 cut(s)	872, 1852, 2207
AccBSI	CCGCTC	1 cut(s)	1792
AccI	GTMKAC	1 cut(s)	2751
AciI	CCGC	4 cut(s)	1792, 2954, 3074, 3102
AclWI	GGATC	2 cut(s)	2249, 2302
AcoI	YGGCCR	5 cut(s)	498, 1220, 1816, 2505, 2647
AcsI	RAATTY	7 cut(s)	402, 493, 1099, 1619, 1897, 2168, 2496
AcuI	CTGAAG	4 cut(s)	332, 1032, 1956, 3210
AfaI	GTAC	3 cut(s)	160, 1541, 1596
AfiI	CCNNNNNNNGG	7 cut(s)	769, 872, 1535, 1852, 1911, 2207, 2491
AflIII	ACRYGT	1 cut(s)	1461
AhlI	ACTAGT	1 cut(s)	1328
AjiI	CACGTC	1 cut(s)	1811
AjnI	CCWGG	8 cut(s)	465, 486, 1516, 1714, 1845, 2105, 2401, 2836
Alw21I	GWGCWC	3 cut(s)	1805, 2784, 2908
Alw26I	GTCTC	4 cut(s)	278, 803, 2591, 2960
AlwI	GGATC	2 cut(s)	2249, 2302
AlwNI	CAGNNNCTG	3 cut(s)	197, 2165, 2999
Ama87I	CYCGRG	1 cut(s)	1655
ApoI	RAATTY	7 cut(s)	402, 493, 1099, 1619, 1897, 2168, 2496
AseI	ATTAAT	1 cut(s)	2681
Asp700I	GAANNNNTTC	2 cut(s)	303, 3182
AspA2I	CCTAGG	2 cut(s)	820, 2083
AspLEI	GCGC	1 cut(s)	2001
AspS9I	GGNCC	6 cut(s)	1290, 1565, 1718, 2221, 2740, 3060
AsuC2I	CCSGG	2 cut(s)	1190, 2282
AsuHPI	GGTGA	9 cut(s)	887, 1083, 1255, 1444, 1678, 1808, 1884, 2444, 3059
AsuII	TTCGAA	1 cut(s)	2572
AsuNHI	GCTAGC	1 cut(s)	2521
AvaI	CYCGRG	1 cut(s)	1655
AvaII	GGWCC	3 cut(s)	1718, 2740, 3060
AvrII	CCTAGG	2 cut(s)	820, 2083
BalI	TGGCCA	4 cut(s)	500, 1222, 2507, 2649
BanI	GGYRCC	1 cut(s)	85
BanII	GRGCYC	2 cut(s)	1263, 2866
BbsI	GAAGAC	4 cut(s)	1119, 2087, 2204, 2381
Bbv12I	GWGCWC	3 cut(s)	1805, 2784, 2908
BccI	CCATC	8 cut(s)	47, 413, 509, 866, 1160, 1192, 1982, 2516
BceAI	ACGGC	1 cut(s)	1803
BcgI	CGANNNNNNTGC	2 cut(s)	2552, 2586
BciT130I	CCWGG	8 cut(s)	467, 488, 1518, 1716, 1847, 2107, 2403, 2838
BclI	TGATCA	1 cut(s)	967
BcnI	CCSGG	2 cut(s)	1190, 2282
BcoDI	GTCTC	4 cut(s)	278, 803, 2591, 2960
BcuI	ACTAGT	1 cut(s)	1328
BfmI	CTRYAG	9 cut(s)	209, 1161, 1764, 1775, 2814, 2848, 2949, 2984, 3168
BfoI	RGCGCY	1 cut(s)	2002
BfuAI	ACCTGC	2 cut(s)	1768, 2170
BlnI	CCTAGG	2 cut(s)	820, 2083
Bme18I	GGWCC	3 cut(s)	1718, 2740, 3060
BmeT110I	CYCGRG	1 cut(s)	1655
BmgBI	CACGTC	1 cut(s)	1811
BmgT120I	GGNCC	6 cut(s)	1290, 1565, 1718, 2221, 2740, 3060
BmiI	GGNNCC	3 cut(s)	87, 2976, 3062
BmrI	ACTGGG	2 cut(s)	2138, 2228
BmsI	GCATC	7 cut(s)	13, 247, 682, 1154, 1563, 2555, 2752
BmtI	GCTAGC	1 cut(s)	2525
BmuI	ACTGGG	2 cut(s)	2138, 2228
BoxI	GACNNNNGTC	1 cut(s)	815
BpiI	GAAGAC	4 cut(s)	1119, 2087, 2204, 2381
BplI	GAGNNNNNCTC	4 cut(s)	1245, 1277, 2766, 2798
BpmI	CTGGAG	4 cut(s)	25, 1539, 2550, 3144
Bpu10I	CCTNAGC	1 cut(s)	3009
Bpu14I	TTCGAA	1 cut(s)	2572
BpuEI	CTTGAG	3 cut(s)	818, 1096, 1333
BpuMI	CCSGG	2 cut(s)	1190, 2282
BsaBI	GATNNNNATC	2 cut(s)	945, 2916
BsaI	GGTCTC	1 cut(s)	2960
BsaXI	ACNNNNNCTCC	2 cut(s)	3142, 3172
Bsc4I	CCNNNNNNNGG	7 cut(s)	769, 872, 1535, 1852, 1911, 2207, 2491
Bse1I	ACTGG	6 cut(s)	141, 2133, 2223, 2747, 3181, 3204
Bse3DI	GCAATG	4 cut(s)	1223, 1747, 1929, 2474
Bse8I	GATNNNNATC	2 cut(s)	945, 2916
BseBI	CCWGG	8 cut(s)	467, 488, 1518, 1716, 1847, 2107, 2403, 2838
BseGI	GGATG	7 cut(s)	58, 103, 220, 625, 1245, 1757, 1901
BseJI	GATNNNNATC	2 cut(s)	945, 2916
BseLI	CCNNNNNNNGG	7 cut(s)	769, 872, 1535, 1852, 1911, 2207, 2491
BseMI	GCAATG	4 cut(s)	1223, 1747, 1929, 2474
BseMII	CTCAG	8 cut(s)	18, 194, 610, 953, 1079, 2664, 3023, 3075
BseNI	ACTGG	6 cut(s)	141, 2133, 2223, 2747, 3181, 3204
BseRI	GAGGAG	7 cut(s)	557, 821, 1454, 2451, 2722, 3144, 3147
BseYI	CCCAGC	1 cut(s)	2942
BsgI	GTGCAG	1 cut(s)	129
BshNI	GGYRCC	1 cut(s)	85
BsiHKAI	GWGCWC	3 cut(s)	1805, 2784, 2908
BsiHKCI	CYCGRG	1 cut(s)	1655
BsiSI	CCGG	2 cut(s)	1189, 2282
BslFI	GGGAC	3 cut(s)	866, 1615, 3046
BslI	CCNNNNNNNGG	7 cut(s)	769, 872, 1535, 1852, 1911, 2207, 2491
BsmAI	GTCTC	4 cut(s)	278, 803, 2591, 2960
BsmBI	CGTCTC	1 cut(s)	803
BsmFI	GGGAC	3 cut(s)	866, 1615, 3046
Bso31I	GGTCTC	1 cut(s)	2960
BsoBI	CYCGRG	1 cut(s)	1655
Bsp119I	TTCGAA	1 cut(s)	2572
Bsp1286I	GDGCHC	5 cut(s)	1263, 1805, 2784, 2866, 2908
Bsp1407I	TGTACA	1 cut(s)	1594
Bsp143I	GATC	9 cut(s)	270, 958, 967, 2254, 2294, 2820, 2917, 3033, 3204
Bsp19I	CCATGG	2 cut(s)	2121, 2516
BspACI	CCGC	4 cut(s)	1792, 2954, 3074, 3102
BspCNI	CTCAG	8 cut(s)	19, 193, 609, 954, 1078, 2665, 3022, 3076
BspHI	TCATGA	4 cut(s)	19, 970, 1320, 2908
BspLI	GGNNCC	3 cut(s)	87, 2976, 3062
BspMAI	CTGCAG	5 cut(s)	1165, 1768, 1779, 2818, 2988
BspMI	ACCTGC	2 cut(s)	1768, 2170
BspOI	GCTAGC	1 cut(s)	2525
BspPI	GGATC	2 cut(s)	2249, 2302
BspQI	GCTCTTC	1 cut(s)	2486
BspT104I	TTCGAA	1 cut(s)	2572
BspT107I	GGYRCC	1 cut(s)	85
BspTNI	GGTCTC	1 cut(s)	2960
BsrBI	CCGCTC	1 cut(s)	1792
BsrDI	GCAATG	4 cut(s)	1223, 1747, 1929, 2474
BsrGI	TGTACA	1 cut(s)	1594
BsrI	ACTGG	6 cut(s)	141, 2133, 2223, 2747, 3181, 3204
BssMI	GATC	9 cut(s)	270, 958, 967, 2254, 2294, 2820, 2917, 3033, 3204
BssT1I	CCWWGG	6 cut(s)	763, 820, 2083, 2121, 2516, 2970
Bst2UI	CCWGG	8 cut(s)	467, 488, 1518, 1716, 1847, 2107, 2403, 2838
Bst4CI	ACNGT	7 cut(s)	814, 1095, 1302, 2207, 2239, 2352, 2857
Bst6I	CTCTTC	7 cut(s)	42, 276, 609, 798, 1162, 2231, 2486
BstAPI	GCANNNNNTGC	5 cut(s)	227, 701, 1783, 1970, 2813
BstAUI	TGTACA	1 cut(s)	1594
BstBI	TTCGAA	1 cut(s)	2572
BstC8I	GCNNGC	5 cut(s)	651, 1552, 2157, 2523, 2735
BstDSI	CCRYGG	4 cut(s)	750, 2121, 2206, 2516
BstEII	GGTNACC	1 cut(s)	460
BstF5I	GGATG	7 cut(s)	58, 103, 220, 625, 1245, 1757, 1901
BstH2I	RGCGCY	1 cut(s)	2002
BstHHI	GCGC	1 cut(s)	2001
BstKTI	GATC	9 cut(s)	273, 961, 970, 2257, 2297, 2823, 2920, 3036, 3207
BstMAI	GTCTC	4 cut(s)	278, 803, 2591, 2960
BstMBI	GATC	9 cut(s)	270, 958, 967, 2254, 2294, 2820, 2917, 3033, 3204
BstNI	CCWGG	8 cut(s)	467, 488, 1518, 1716, 1847, 2107, 2403, 2838
BstNSI	RCATGY	2 cut(s)	1465, 2811
BstPAI	GACNNNNGTC	1 cut(s)	815
BstPI	GGTNACC	1 cut(s)	460
BstSFI	CTRYAG	9 cut(s)	209, 1161, 1764, 1775, 2814, 2848, 2949, 2984, 3168
BstV2I	GAAGAC	4 cut(s)	1119, 2087, 2204, 2381
BstXI	CCANNNNNNTGG	2 cut(s)	2128, 2792
BtgI	CCRYGG	4 cut(s)	750, 2121, 2206, 2516
BtrI	CACGTC	1 cut(s)	1811
BtsCI	GGATG	7 cut(s)	58, 103, 220, 625, 1245, 1757, 1901
BtsI	GCAGTG	2 cut(s)	1761, 2100
BtsIMutI	CAGTG	6 cut(s)	604, 1761, 2100, 2126, 3186, 3197
BveI	ACCTGC	2 cut(s)	1768, 2170
Cac8I	GCNNGC	5 cut(s)	651, 1552, 2157, 2523, 2735
CaiI	CAGNNNCTG	3 cut(s)	197, 2165, 2999
CciI	TCATGA	4 cut(s)	19, 970, 1320, 2908
CfoI	GCGC	1 cut(s)	2001
Cfr13I	GGNCC	6 cut(s)	1290, 1565, 1718, 2221, 2740, 3060
CseI	GACGC	2 cut(s)	1016, 2739
Csp6I	GTAC	3 cut(s)	159, 1540, 1595
CspCI	CAANNNNNGTGG	6 cut(s)	1020, 1055, 1315, 1350, 1750, 1785
CviQI	GTAC	3 cut(s)	159, 1540, 1595
DpnI	GATC	9 cut(s)	272, 960, 969, 2256, 2296, 2822, 2919, 3035, 3206
DpnII	GATC	9 cut(s)	270, 958, 967, 2254, 2294, 2820, 2917, 3033, 3204
DraI	TTTAAA	2 cut(s)	1002, 1399
DrdI	GACNNNNNNGTC	1 cut(s)	2747
DseDI	GACNNNNNNGTC	1 cut(s)	2747
EaeI	YGGCCR	5 cut(s)	498, 1220, 1816, 2505, 2647
Eam1104I	CTCTTC	7 cut(s)	42, 276, 609, 798, 1162, 2231, 2486
EarI	CTCTTC	7 cut(s)	42, 276, 609, 798, 1162, 2231, 2486
Eco130I	CCWWGG	6 cut(s)	763, 820, 2083, 2121, 2516, 2970
Eco24I	GRGCYC	2 cut(s)	1263, 2866
Eco31I	GGTCTC	1 cut(s)	2960
Eco32I	GATATC	1 cut(s)	204
Eco47I	GGWCC	3 cut(s)	1718, 2740, 3060
Eco57I	CTGAAG	4 cut(s)	332, 1032, 1956, 3210
Eco88I	CYCGRG	1 cut(s)	1655
Eco91I	GGTNACC	1 cut(s)	460
EcoO109I	RGGNCCY	1 cut(s)	3060
EcoO65I	GGTNACC	1 cut(s)	460
EcoRII	CCWGG	8 cut(s)	465, 486, 1516, 1714, 1845, 2105, 2401, 2836
EcoRV	GATATC	1 cut(s)	204
EcoT14I	CCWWGG	6 cut(s)	763, 820, 2083, 2121, 2516, 2970
EcoT38I	GRGCYC	2 cut(s)	1263, 2866
ErhI	CCWWGG	6 cut(s)	763, 820, 2083, 2121, 2516, 2970
Esp3I	CGTCTC	1 cut(s)	803
FaqI	GGGAC	3 cut(s)	866, 1615, 3046
FauI	CCCGC	1 cut(s)	1785
FbaI	TGATCA	1 cut(s)	967
FblI	GTMKAC	1 cut(s)	2751
FokI	GGATG	7 cut(s)	65, 110, 227, 632, 1252, 1744, 1888
FriOI	GRGCYC	2 cut(s)	1263, 2866
GlaI	GCGC	1 cut(s)	2000
GsaI	CCCAGC	1 cut(s)	2946
GsuI	CTGGAG	4 cut(s)	25, 1539, 2550, 3144
HaeII	RGCGCY	1 cut(s)	2002
HapII	CCGG	2 cut(s)	1189, 2282
HgaI	GACGC	2 cut(s)	1016, 2739
HhaI	GCGC	1 cut(s)	2001
Hin6I	GCGC	1 cut(s)	1999
HinP1I	GCGC	1 cut(s)	1999
HincII	GTYRAC	2 cut(s)	33, 688
HindII	GTYRAC	2 cut(s)	33, 688
HindIII	AAGCTT	1 cut(s)	1446
HpaII	CCGG	2 cut(s)	1189, 2282
HphI	GGTGA	9 cut(s)	887, 1083, 1255, 1444, 1678, 1808, 1884, 2444, 3059
Hpy166II	GTNNAC	8 cut(s)	33, 562, 688, 1091, 2579, 2752, 3143, 3186
Hpy8I	GTNNAC	8 cut(s)	33, 562, 688, 1091, 2579, 2752, 3143, 3186
HpyAV	CCTTC	9 cut(s)	100, 293, 547, 921, 1063, 2495, 2753, 2932, 3185
HpyCH4III	ACNGT	7 cut(s)	814, 1095, 1302, 2207, 2239, 2352, 2857
HpyCH4IV	ACGT	4 cut(s)	58, 1810, 1826, 2886
HpySE526I	ACGT	4 cut(s)	58, 1810, 1826, 2886
HspAI	GCGC	1 cut(s)	1999
Ksp22I	TGATCA	1 cut(s)	967
Kzo9I	GATC	9 cut(s)	270, 958, 967, 2254, 2294, 2820, 2917, 3033, 3204
LguI	GCTCTTC	1 cut(s)	2486
LmnI	GCTCC	5 cut(s)	2132, 2203, 2404, 2787, 3076
LweI	GCATC	7 cut(s)	13, 247, 682, 1154, 1563, 2555, 2752
MaeII	ACGT	4 cut(s)	58, 1810, 1826, 2886
MaeIII	GTNAC	5 cut(s)	460, 622, 1302, 1666, 3065
MalI	GATC	9 cut(s)	272, 960, 969, 2256, 2296, 2822, 2919, 3035, 3206
MbiI	CCGCTC	1 cut(s)	1792
MboI	GATC	9 cut(s)	270, 958, 967, 2254, 2294, 2820, 2917, 3033, 3204
MfeI	CAATTG	2 cut(s)	867, 1611
MhlI	GDGCHC	5 cut(s)	1263, 1805, 2784, 2866, 2908
MlsI	TGGCCA	4 cut(s)	500, 1222, 2507, 2649
MluNI	TGGCCA	4 cut(s)	500, 1222, 2507, 2649
MlyI	GAGTC	6 cut(s)	20, 32, 2195, 2298, 2452, 2989
MmeI	TCCRAC	4 cut(s)	756, 1199, 2221, 2707
Mox20I	TGGCCA	4 cut(s)	500, 1222, 2507, 2649
MroXI	GAANNNNTTC	2 cut(s)	303, 3182
MscI	TGGCCA	4 cut(s)	500, 1222, 2507, 2649
MslI	CAYNNNNRTG	3 cut(s)	975, 1596, 1818
Msp20I	TGGCCA	4 cut(s)	500, 1222, 2507, 2649
MspA1I	CMGCKG	3 cut(s)	1673, 2954, 2996
MspI	CCGG	2 cut(s)	1189, 2282
MunI	CAATTG	2 cut(s)	867, 1611
MvaI	CCWGG	8 cut(s)	467, 488, 1518, 1716, 1847, 2107, 2403, 2838
NciI	CCSGG	2 cut(s)	1190, 2282
NcoI	CCATGG	2 cut(s)	2121, 2516
NdeII	GATC	9 cut(s)	270, 958, 967, 2254, 2294, 2820, 2917, 3033, 3204
NheI	GCTAGC	1 cut(s)	2521
NlaIV	GGNNCC	3 cut(s)	87, 2976, 3062
NmeAIII	GCCGAG	1 cut(s)	2798
NmuCI	GTSAC	2 cut(s)	1666, 3065
NspI	RCATGY	2 cut(s)	1465, 2811
NspV	TTCGAA	1 cut(s)	2572
PaeR7I	CTCGAG	1 cut(s)	1655
PagI	TCATGA	4 cut(s)	19, 970, 1320, 2908
PciI	ACATGT	1 cut(s)	1461
PciSI	GCTCTTC	1 cut(s)	2486
PcsI	WCGNNNNNNNCGW	1 cut(s)	1816
PdmI	GAANNNNTTC	2 cut(s)	303, 3182
PfeI	GAWTC	7 cut(s)	362, 946, 995, 1417, 1513, 2831, 3164
PflMI	CCANNNNNTGG	3 cut(s)	872, 1852, 2207
PfoI	TCCNGGA	2 cut(s)	1516, 1845
PleI	GAGTC	6 cut(s)	19, 32, 2194, 2298, 2452, 2988
PpsI	GAGTC	6 cut(s)	19, 32, 2194, 2298, 2452, 2988
PpuMI	RGGWCCY	1 cut(s)	3060
PscI	ACATGT	1 cut(s)	1461
PshAI	GACNNNNGTC	1 cut(s)	815
PshBI	ATTAAT	1 cut(s)	2681
Psp5II	RGGWCCY	1 cut(s)	3060
Psp6I	CCWGG	8 cut(s)	465, 486, 1516, 1714, 1845, 2105, 2401, 2836
PspEI	GGTNACC	1 cut(s)	460
PspFI	CCCAGC	1 cut(s)	2942
PspGI	CCWGG	8 cut(s)	465, 486, 1516, 1714, 1845, 2105, 2401, 2836
PspN4I	GGNNCC	3 cut(s)	87, 2976, 3062
PspPI	GGNCC	6 cut(s)	1290, 1565, 1718, 2221, 2740, 3060
PspPPI	RGGWCCY	1 cut(s)	3060
PspXI	VCTCGAGB	1 cut(s)	1655
PsrI	GAACNNNNNNTAC	2 cut(s)	1072, 1104
PstI	CTGCAG	5 cut(s)	1165, 1768, 1779, 2818, 2988
PstNI	CAGNNNCTG	3 cut(s)	197, 2165, 2999
PvuII	CAGCTG	2 cut(s)	1673, 2996
RsaI	GTAC	3 cut(s)	160, 1541, 1596
RsaNI	GTAC	3 cut(s)	159, 1540, 1595
RseI	CAYNNNNRTG	3 cut(s)	975, 1596, 1818
SapI	GCTCTTC	1 cut(s)	2486
Sau3AI	GATC	9 cut(s)	270, 958, 967, 2254, 2294, 2820, 2917, 3033, 3204
Sau96I	GGNCC	6 cut(s)	1290, 1565, 1718, 2221, 2740, 3060
SchI	GAGTC	6 cut(s)	20, 32, 2195, 2298, 2452, 2989
SduI	GDGCHC	5 cut(s)	1263, 1805, 2784, 2866, 2908
SfaNI	GCATC	7 cut(s)	13, 247, 682, 1154, 1563, 2555, 2752
SfcI	CTRYAG	9 cut(s)	209, 1161, 1764, 1775, 2814, 2848, 2949, 2984, 3168
Sfr274I	CTCGAG	1 cut(s)	1655
SfuI	TTCGAA	1 cut(s)	2572
SinI	GGWCC	3 cut(s)	1718, 2740, 3060
SlaI	CTCGAG	1 cut(s)	1655
SmiMI	CAYNNNNRTG	3 cut(s)	975, 1596, 1818
SmlI	CTYRAG	4 cut(s)	797, 1075, 1348, 1655
SmoI	CTYRAG	4 cut(s)	797, 1075, 1348, 1655
SpeI	ACTAGT	1 cut(s)	1328
SsiI	CCGC	4 cut(s)	1792, 2954, 3074, 3102
SspI	AATATT	1 cut(s)	2055
StyI	CCWWGG	6 cut(s)	763, 820, 2083, 2121, 2516, 2970
TaaI	ACNGT	7 cut(s)	814, 1095, 1302, 2207, 2239, 2352, 2857
TaiI	ACGT	4 cut(s)	61, 1813, 1829, 2889
TaqI	TCGA	8 cut(s)	1279, 1369, 1656, 2011, 2572, 2641, 2916, 3130
TatI	WGTACW	1 cut(s)	1594
TfiI	GAWTC	7 cut(s)	362, 946, 995, 1417, 1513, 2831, 3164
TscAI	CASTG	6 cut(s)	604, 1768, 2107, 2133, 3193, 3204
TseFI	GTSAC	2 cut(s)	1666, 3065
Tsp45I	GTSAC	2 cut(s)	1666, 3065
TspDTI	ATGAA	7 cut(s)	8, 78, 114, 231, 294, 318, 1890
TspGWI	ACGGA	1 cut(s)	767
TspRI	CASTG	6 cut(s)	604, 1768, 2107, 2133, 3193, 3204
Van91I	CCANNNNNTGG	3 cut(s)	872, 1852, 2207
VpaK11BI	GGWCC	3 cut(s)	1718, 2740, 3060
VspI	ATTAAT	1 cut(s)	2681
XapI	RAATTY	7 cut(s)	402, 493, 1099, 1619, 1897, 2168, 2496
XceI	RCATGY	2 cut(s)	1465, 2811
XcmI	CCANNNNNNNNNTGG	1 cut(s)	133
XhoI	CTCGAG	1 cut(s)	1655
XmaJI	CCTAGG	2 cut(s)	820, 2083
XmiI	GTMKAC	1 cut(s)	2751
XmnI	GAANNNNTTC	2 cut(s)	303, 3182

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.